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GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
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Results for CACCUCC
Z-value: 0.09
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miRNA associated with seed CACCUCC
| Name | miRBASE accession |
|---|---|
|
hsa-miR-1306-5p
|
MIMAT0022726 |
Network of associatons between targets according to the STRING database.
First level regulatory network of CACCUCC
| Promoter | Score | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr5_+_176365455 Show fit | 0.51 |
ENST00000310389.6
|
ADP ribosylation factor like GTPase 10 |
|
| chr9_-_98708856 Show fit | 0.45 |
ENST00000259455.4
|
gamma-aminobutyric acid type B receptor subunit 2 |
|
| chr1_+_46489800 Show fit | 0.40 |
ENST00000360032.4
|
diencephalon/mesencephalon homeobox 1 |
|
| chr11_-_45665578 Show fit | 0.30 |
ENST00000308064.7
|
carbohydrate sulfotransferase 1 |
|
| chr8_+_11284789 Show fit | 0.28 |
ENST00000221086.8
|
myotubularin related protein 9 |
|
| chr22_+_39994926 Show fit | 0.26 |
ENST00000333407.11
|
family with sequence similarity 83 member F |
|
| chr9_-_128067310 Show fit | 0.22 |
ENST00000373078.5
|
nuclear apoptosis inducing factor 1 |
|
| chr1_+_19312296 Show fit | 0.22 |
ENST00000375155.7
ENST00000375153.8 |
solute carrier family 66 member 1 |
|
| chr14_-_77377046 Show fit | 0.20 |
ENST00000216468.8
|
transmembrane p24 trafficking protein family member 8 |
|
| chr22_-_44312894 Show fit | 0.19 |
ENST00000381176.5
|
shisa like 1 |
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.4 | GO:0008343 | adult feeding behavior(GO:0008343) |
| 0.0 | 0.3 | GO:0006012 | galactose metabolic process(GO:0006012) |
| 0.0 | 0.2 | GO:0043045 | DNA methylation involved in embryo development(GO:0043045) changes to DNA methylation involved in embryo development(GO:1901538) |
| 0.0 | 0.2 | GO:0035414 | negative regulation of catenin import into nucleus(GO:0035414) |
| 0.0 | 0.1 | GO:2000681 | negative regulation of rubidium ion transport(GO:2000681) negative regulation of rubidium ion transmembrane transporter activity(GO:2000687) |
| 0.0 | 0.1 | GO:0046092 | deoxycytidine metabolic process(GO:0046092) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.4 | GO:0038039 | G-protein coupled receptor heterodimeric complex(GO:0038039) |
| 0.0 | 0.1 | GO:0001940 | male pronucleus(GO:0001940) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.4 | GO:0004965 | G-protein coupled GABA receptor activity(GO:0004965) |
| 0.0 | 0.3 | GO:0001517 | N-acetylglucosamine 6-O-sulfotransferase activity(GO:0001517) |
| 0.0 | 0.3 | GO:0052629 | phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629) |
| 0.0 | 0.1 | GO:0004137 | deoxycytidine kinase activity(GO:0004137) thymidine kinase activity(GO:0004797) |
| 0.0 | 0.1 | GO:0003886 | DNA (cytosine-5-)-methyltransferase activity(GO:0003886) |
| 0.0 | 0.1 | GO:0005222 | intracellular cAMP activated cation channel activity(GO:0005222) |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.4 | REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS | Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors) |