GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
EP300 | hg38_v1_chr22_+_41092585_41092633, hg38_v1_chr22_+_41092869_41093005 | -0.27 | 7.3e-05 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_+_6199715 Show fit | 16.79 |
ENST00000382518.6
ENST00000642746.1 ENST00000538834.6 |
CD9 molecule |
|
chr14_-_68979251 Show fit | 16.40 |
ENST00000438964.6
ENST00000679147.1 |
actinin alpha 1 |
|
chr14_-_68979274 Show fit | 16.04 |
ENST00000394419.9
|
actinin alpha 1 |
|
chr14_-_68979314 Show fit | 15.86 |
ENST00000684713.1
ENST00000683198.1 ENST00000684598.1 ENST00000682331.1 ENST00000682291.1 ENST00000683342.1 |
actinin alpha 1 |
|
chr12_+_6200327 Show fit | 15.77 |
ENST00000610354.5
|
CD9 molecule |
|
chr14_-_68979076 Show fit | 15.70 |
ENST00000538545.6
ENST00000684639.1 |
actinin alpha 1 |
|
chr12_+_6200351 Show fit | 15.46 |
ENST00000679331.1
ENST00000382519.9 ENST00000009180.10 ENST00000536586.7 |
CD9 molecule |
|
chr14_-_68979436 Show fit | 15.42 |
ENST00000193403.10
|
actinin alpha 1 |
|
chr10_-_125161019 Show fit | 15.06 |
ENST00000411419.6
|
C-terminal binding protein 2 |
|
chrX_+_23667461 Show fit | 12.33 |
ENST00000379341.9
ENST00000379331.3 |
peroxiredoxin 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.5 | 79.4 | GO:0051639 | actin filament network formation(GO:0051639) |
4.0 | 48.0 | GO:0009414 | response to water deprivation(GO:0009414) |
6.0 | 42.2 | GO:0030421 | defecation(GO:0030421) |
3.5 | 35.2 | GO:0010756 | positive regulation of plasminogen activation(GO:0010756) |
5.0 | 19.8 | GO:0002541 | activation of plasma proteins involved in acute inflammatory response(GO:0002541) |
1.9 | 19.0 | GO:0048386 | positive regulation of retinoic acid receptor signaling pathway(GO:0048386) |
1.7 | 14.9 | GO:1903142 | positive regulation of endothelial cell development(GO:1901552) positive regulation of establishment of endothelial barrier(GO:1903142) |
2.3 | 13.5 | GO:0060356 | leucine import(GO:0060356) |
3.1 | 12.3 | GO:2000255 | negative regulation of male germ cell proliferation(GO:2000255) |
1.4 | 12.3 | GO:0061302 | smooth muscle cell-matrix adhesion(GO:0061302) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.1 | 79.4 | GO:0005916 | fascia adherens(GO:0005916) |
1.3 | 48.0 | GO:0031092 | platelet alpha granule membrane(GO:0031092) |
4.4 | 35.2 | GO:0000015 | phosphopyruvate hydratase complex(GO:0000015) |
0.3 | 31.5 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
0.2 | 22.4 | GO:0005882 | intermediate filament(GO:0005882) |
0.6 | 19.8 | GO:0031233 | intrinsic component of external side of plasma membrane(GO:0031233) |
1.2 | 19.0 | GO:0097470 | ribbon synapse(GO:0097470) |
0.0 | 18.9 | GO:0031012 | extracellular matrix(GO:0031012) |
0.1 | 15.5 | GO:0005796 | Golgi lumen(GO:0005796) |
0.1 | 13.5 | GO:0042470 | melanosome(GO:0042470) pigment granule(GO:0048770) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.8 | 79.4 | GO:0017166 | vinculin binding(GO:0017166) |
0.3 | 43.6 | GO:0008201 | heparin binding(GO:0008201) |
0.2 | 40.8 | GO:0005178 | integrin binding(GO:0005178) |
4.4 | 35.2 | GO:0004634 | phosphopyruvate hydratase activity(GO:0004634) |
1.2 | 21.1 | GO:0019215 | intermediate filament binding(GO:0019215) |
0.1 | 20.5 | GO:0004896 | cytokine receptor activity(GO:0004896) |
0.1 | 20.1 | GO:0044325 | ion channel binding(GO:0044325) |
2.7 | 19.0 | GO:0016618 | hydroxypyruvate reductase activity(GO:0016618) glyoxylate reductase (NADP) activity(GO:0030267) |
0.1 | 18.7 | GO:0017137 | Rab GTPase binding(GO:0017137) |
0.1 | 16.5 | GO:0051219 | phosphoprotein binding(GO:0051219) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 121.6 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.4 | 57.8 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.6 | 49.3 | PID A6B1 A6B4 INTEGRIN PATHWAY | a6b1 and a6b4 Integrin signaling |
0.2 | 28.0 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.1 | 16.8 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.2 | 14.3 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.3 | 13.8 | PID S1P S1P2 PATHWAY | S1P2 pathway |
0.2 | 10.2 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.2 | 9.4 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.1 | 8.1 | PID TGFBR PATHWAY | TGF-beta receptor signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.7 | 89.6 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.4 | 53.2 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.6 | 35.2 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.6 | 21.1 | REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES | Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates |
0.4 | 19.8 | REACTOME FORMATION OF FIBRIN CLOT CLOTTING CASCADE | Genes involved in Formation of Fibrin Clot (Clotting Cascade) |
0.4 | 17.5 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.2 | 16.8 | REACTOME MUSCLE CONTRACTION | Genes involved in Muscle contraction |
0.4 | 12.3 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.1 | 10.4 | REACTOME ASPARAGINE N LINKED GLYCOSYLATION | Genes involved in Asparagine N-linked glycosylation |
0.1 | 8.6 | REACTOME L1CAM INTERACTIONS | Genes involved in L1CAM interactions |