GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.7 | 53.6 | GO:0006527 | arginine catabolic process(GO:0006527) |
5.7 | 51.4 | GO:0031536 | regulation of ubiquitin homeostasis(GO:0010993) free ubiquitin chain polymerization(GO:0010994) positive regulation of exit from mitosis(GO:0031536) |
0.7 | 48.4 | GO:0097031 | NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031) |
1.1 | 46.5 | GO:0070979 | protein K11-linked ubiquitination(GO:0070979) |
5.2 | 31.3 | GO:1904274 | tricellular tight junction assembly(GO:1904274) |
0.2 | 31.3 | GO:0008203 | cholesterol metabolic process(GO:0008203) |
0.2 | 25.2 | GO:0031424 | keratinization(GO:0031424) |
1.7 | 22.1 | GO:0006268 | DNA unwinding involved in DNA replication(GO:0006268) |
3.7 | 18.5 | GO:0006177 | GMP biosynthetic process(GO:0006177) |
0.4 | 18.4 | GO:0050873 | brown fat cell differentiation(GO:0050873) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.2 | 64.6 | GO:0005680 | anaphase-promoting complex(GO:0005680) |
0.0 | 61.9 | GO:0005615 | extracellular space(GO:0005615) |
3.9 | 31.3 | GO:0061689 | tricellular tight junction(GO:0061689) |
0.1 | 29.2 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
0.1 | 28.9 | GO:0010008 | endosome membrane(GO:0010008) |
0.0 | 28.3 | GO:0005815 | microtubule organizing center(GO:0005815) |
0.0 | 24.8 | GO:0005730 | nucleolus(GO:0005730) |
0.3 | 24.1 | GO:0030672 | synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501) |
1.7 | 22.1 | GO:0042555 | MCM complex(GO:0042555) |
0.5 | 21.8 | GO:0045095 | keratin filament(GO:0045095) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 84.7 | GO:0061631 | ubiquitin conjugating enzyme activity(GO:0061631) |
7.7 | 53.6 | GO:0016403 | dimethylargininase activity(GO:0016403) |
0.1 | 36.0 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 28.2 | GO:0005525 | GTP binding(GO:0005525) |
0.4 | 22.7 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
0.4 | 22.1 | GO:0004003 | ATP-dependent DNA helicase activity(GO:0004003) |
0.7 | 20.0 | GO:0004181 | metallocarboxypeptidase activity(GO:0004181) |
0.3 | 19.4 | GO:0003743 | translation initiation factor activity(GO:0003743) |
4.6 | 18.5 | GO:0003938 | IMP dehydrogenase activity(GO:0003938) |
0.1 | 17.3 | GO:0005179 | hormone activity(GO:0005179) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 72.8 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.7 | 34.4 | PID BARD1 PATHWAY | BARD1 signaling events |
0.4 | 28.6 | PID PLK1 PATHWAY | PLK1 signaling events |
0.4 | 16.9 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
0.3 | 14.9 | PID ATR PATHWAY | ATR signaling pathway |
0.2 | 13.6 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.2 | 11.9 | PID IL2 PI3K PATHWAY | IL2 signaling events mediated by PI3K |
0.3 | 10.6 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.2 | 9.5 | PID A6B1 A6B4 INTEGRIN PATHWAY | a6b1 and a6b4 Integrin signaling |
0.1 | 8.1 | ST FAS SIGNALING PATHWAY | Fas Signaling Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.0 | 77.3 | REACTOME PHOSPHORYLATION OF THE APC C | Genes involved in Phosphorylation of the APC/C |
0.9 | 36.7 | REACTOME SIGNALING BY BMP | Genes involved in Signaling by BMP |
0.3 | 22.7 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
1.5 | 22.1 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |
1.0 | 19.9 | REACTOME SYNTHESIS SECRETION AND DEACYLATION OF GHRELIN | Genes involved in Synthesis, Secretion, and Deacylation of Ghrelin |
0.3 | 19.4 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
1.2 | 18.5 | REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS | Genes involved in Purine ribonucleoside monophosphate biosynthesis |
0.4 | 16.9 | REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE | Genes involved in Sema4D induced cell migration and growth-cone collapse |
0.2 | 16.2 | REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS | Genes involved in Golgi Associated Vesicle Biogenesis |
0.1 | 15.1 | REACTOME MHC CLASS II ANTIGEN PRESENTATION | Genes involved in MHC class II antigen presentation |