Project

GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

Navigation
Downloads

Results for GAGAACU

Z-value: 0.06

Motif logo

miRNA associated with seed GAGAACU

NamemiRBASE accession
MIMAT0000449
MIMAT0002809
MIMAT0028216

Activity profile of GAGAACU motif

Sorted Z-values of GAGAACU motif

Network of associatons between targets according to the STRING database.

First level regulatory network of GAGAACU

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image
Promoter Score Transcript Gene Gene Info
chr2_+_84971093 0.23 ENST00000456682.1
ENST00000409785.9
potassium channel modulatory factor 1
chr8_+_55102012 0.17 ENST00000327381.7
XK related 4
chr18_+_11981488 0.15 ENST00000269159.8
inositol monophosphatase 2
chr16_-_69334871 0.12 ENST00000562949.1
novel protein, COG8-PDF readthrough
chr14_-_67674583 0.12 ENST00000554659.6
vesicle transport through interaction with t-SNAREs 1B
chr13_+_99501464 0.10 ENST00000376387.5
transmembrane 9 superfamily member 2
chr15_+_91853690 0.10 ENST00000318445.11
solute carrier organic anion transporter family member 3A1
chr15_-_52529050 0.09 ENST00000399231.7
myosin VA
chr16_-_69330564 0.09 ENST00000288022.2
peptide deformylase, mitochondrial
chr3_-_125375249 0.08 ENST00000484491.5
ENST00000492394.5
ENST00000471196.1
ENST00000468369.5
ENST00000485866.5
ENST00000360647.9
zinc finger protein 148
chr6_+_159969070 0.08 ENST00000356956.6
insulin like growth factor 2 receptor
chr17_-_43022350 0.07 ENST00000587173.5
ENST00000355653.8
vesicle amine transport 1
chr6_-_24911029 0.07 ENST00000259698.9
ENST00000644621.1
ENST00000644411.1
RHO family interacting cell polarization regulator 2
chr6_-_89412219 0.06 ENST00000369415.9
Ras related GTP binding D
chr17_+_30477362 0.05 ENST00000225724.9
ENST00000451249.7
ENST00000467337.6
ENST00000581721.5
ENST00000414833.2
golgi SNAP receptor complex member 1
chr14_-_25049889 0.05 ENST00000419632.6
ENST00000396700.5
syntaxin binding protein 6
chr12_-_7872843 0.04 ENST00000340749.9
ENST00000535295.5
ENST00000539234.5
solute carrier family 2 member 14
chr1_+_32465046 0.04 ENST00000609129.2
zinc finger and BTB domain containing 8B
chr3_+_11272413 0.04 ENST00000446450.6
ENST00000354956.9
ENST00000354449.7
ENST00000419112.5
autophagy related 7
chr3_-_79019444 0.03 ENST00000618833.4
ENST00000436010.6
ENST00000618846.4
roundabout guidance receptor 1
chr14_+_102922639 0.03 ENST00000299155.10
amnion associated transmembrane protein
chr9_+_68705230 0.03 ENST00000265382.8
phosphatidylinositol-4-phosphate 5-kinase type 1 beta
chr17_-_32342132 0.02 ENST00000577809.6
ENST00000225805.8
chromosome 17 open reading frame 75
chr18_+_22169580 0.02 ENST00000269216.10
GATA binding protein 6
chr16_-_46748337 0.02 ENST00000394809.9
myosin light chain kinase 3
chr5_+_10353668 0.02 ENST00000274140.10
ENST00000449913.6
ENST00000503788.5
membrane associated ring-CH-type finger 6
chr4_-_70839873 0.02 ENST00000545193.5
ENST00000254799.11
G-rich RNA sequence binding factor 1
chr10_+_86756580 0.01 ENST00000372037.8
bone morphogenetic protein receptor type 1A
chrX_-_41922992 0.01 ENST00000646120.2
ENST00000421587.8
ENST00000644770.1
ENST00000645566.1
ENST00000378166.9
ENST00000378158.6
ENST00000644219.1
ENST00000442742.7
ENST00000644347.1
calcium/calmodulin dependent serine protein kinase
chr17_-_39864304 0.01 ENST00000346872.8
IKAROS family zinc finger 3
chr8_-_88327475 0.01 ENST00000286614.11
matrix metallopeptidase 16
chr8_+_103819244 0.01 ENST00000262231.14
ENST00000507740.5
ENST00000408894.6
regulating synaptic membrane exocytosis 2
chr4_-_41748713 0.00 ENST00000226382.4
paired like homeobox 2B
chr17_-_1710368 0.00 ENST00000330676.8
TLC domain containing 2
chrX_-_78139612 0.00 ENST00000341864.6
TATA-box binding protein associated factor 9b
chr20_+_64164446 0.00 ENST00000328439.6
myelin transcription factor 1

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0006021 inositol biosynthetic process(GO:0006021)
0.0 0.1 GO:0051643 endoplasmic reticulum localization(GO:0051643)
0.0 0.1 GO:2001107 negative regulation of establishment of T cell polarity(GO:1903904) negative regulation of Rho guanyl-nucleotide exchange factor activity(GO:2001107)
0.0 0.1 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.0 0.0 GO:1901859 late nucleophagy(GO:0044805) negative regulation of mitochondrial DNA replication(GO:0090298) negative regulation of mitochondrial DNA metabolic process(GO:1901859)
0.0 0.1 GO:0071233 cellular response to leucine(GO:0071233)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0005797 Golgi medial cisterna(GO:0005797)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0005010 insulin-like growth factor-activated receptor activity(GO:0005010)
0.0 0.1 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate 3-phosphatase activity(GO:0052832) inositol monophosphate 4-phosphatase activity(GO:0052833) inositol monophosphate phosphatase activity(GO:0052834)