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GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

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Results for GAGAACU

Z-value: 0.06

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miRNA associated with seed GAGAACU

NamemiRBASE accession
hsa-miR-146a-5p
MIMAT0000449
hsa-miR-146b-5p
MIMAT0002809
hsa-miR-7153-5p
MIMAT0028216

Activity profile of GAGAACU motif

Sorted Z-values of GAGAACU motif

Network of associatons between targets according to the STRING database.

First level regulatory network of GAGAACU

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr2_+_84971093 0.23 ENST00000456682.1
ENST00000409785.9
KCMF1
potassium channel modulatory factor 1
chr8_+_55102012 0.17 ENST00000327381.7
XKR4
XK related 4
chr18_+_11981488 0.15 ENST00000269159.8
IMPA2
inositol monophosphatase 2
chr16_-_69334871 0.12 ENST00000562949.1
ENSG00000272617.3
novel protein, COG8-PDF readthrough
chr14_-_67674583 0.12 ENST00000554659.6
VTI1B
vesicle transport through interaction with t-SNAREs 1B
chr13_+_99501464 0.10 ENST00000376387.5
TM9SF2
transmembrane 9 superfamily member 2
chr15_+_91853690 0.10 ENST00000318445.11
SLCO3A1
solute carrier organic anion transporter family member 3A1
chr15_-_52529050 0.09 ENST00000399231.7
MYO5A
myosin VA
chr16_-_69330564 0.09 ENST00000288022.2
PDF
peptide deformylase, mitochondrial
chr3_-_125375249 0.08 ENST00000484491.5
ENST00000492394.5
ENST00000471196.1
ENST00000468369.5
ENST00000485866.5
ENST00000360647.9
ZNF148
zinc finger protein 148
chr6_+_159969070 0.08 ENST00000356956.6
IGF2R
insulin like growth factor 2 receptor
chr17_-_43022350 0.07 ENST00000587173.5
ENST00000355653.8
VAT1
vesicle amine transport 1
chr6_-_24911029 0.07 ENST00000259698.9
ENST00000644621.1
ENST00000644411.1
RIPOR2
RHO family interacting cell polarization regulator 2
chr6_-_89412219 0.06 ENST00000369415.9
RRAGD
Ras related GTP binding D
chr17_+_30477362 0.05 ENST00000225724.9
ENST00000451249.7
ENST00000467337.6
ENST00000581721.5
ENST00000414833.2
GOSR1
golgi SNAP receptor complex member 1
chr14_-_25049889 0.05 ENST00000419632.6
ENST00000396700.5
STXBP6
syntaxin binding protein 6
chr12_-_7872843 0.04 ENST00000340749.9
ENST00000535295.5
ENST00000539234.5
SLC2A14
solute carrier family 2 member 14
chr1_+_32465046 0.04 ENST00000609129.2
ZBTB8B
zinc finger and BTB domain containing 8B
chr3_+_11272413 0.04 ENST00000446450.6
ENST00000354956.9
ENST00000354449.7
ENST00000419112.5
ATG7
autophagy related 7
chr3_-_79019444 0.03 ENST00000618833.4
ENST00000436010.6
ENST00000618846.4
ROBO1
roundabout guidance receptor 1
chr14_+_102922639 0.03 ENST00000299155.10
AMN
amnion associated transmembrane protein
chr9_+_68705230 0.03 ENST00000265382.8
PIP5K1B
phosphatidylinositol-4-phosphate 5-kinase type 1 beta
chr17_-_32342132 0.02 ENST00000577809.6
ENST00000225805.8
C17orf75
chromosome 17 open reading frame 75
chr18_+_22169580 0.02 ENST00000269216.10
GATA6
GATA binding protein 6
chr16_-_46748337 0.02 ENST00000394809.9
MYLK3
myosin light chain kinase 3
chr5_+_10353668 0.02 ENST00000274140.10
ENST00000449913.6
ENST00000503788.5
MARCHF6
membrane associated ring-CH-type finger 6
chr4_-_70839873 0.02 ENST00000545193.5
ENST00000254799.11
GRSF1
G-rich RNA sequence binding factor 1
chr10_+_86756580 0.01 ENST00000372037.8
BMPR1A
bone morphogenetic protein receptor type 1A
chrX_-_41922992 0.01 ENST00000646120.2
ENST00000421587.8
ENST00000644770.1
ENST00000645566.1
ENST00000378166.9
ENST00000378158.6
ENST00000644219.1
ENST00000442742.7
ENST00000644347.1
CASK
calcium/calmodulin dependent serine protein kinase
chr17_-_39864304 0.01 ENST00000346872.8
IKZF3
IKAROS family zinc finger 3
chr8_-_88327475 0.01 ENST00000286614.11
MMP16
matrix metallopeptidase 16
chr8_+_103819244 0.01 ENST00000262231.14
ENST00000507740.5
ENST00000408894.6
RIMS2
regulating synaptic membrane exocytosis 2
chr4_-_41748713 0.00 ENST00000226382.4
PHOX2B
paired like homeobox 2B
chr17_-_1710368 0.00 ENST00000330676.8
TLCD2
TLC domain containing 2
chrX_-_78139612 0.00 ENST00000341864.6
TAF9B
TATA-box binding protein associated factor 9b
chr20_+_64164446 0.00 ENST00000328439.6
MYT1
myelin transcription factor 1

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0006021 inositol biosynthetic process(GO:0006021)
0.0 0.1 GO:0051643 endoplasmic reticulum localization(GO:0051643)
0.0 0.1 GO:2001107 negative regulation of establishment of T cell polarity(GO:1903904) negative regulation of Rho guanyl-nucleotide exchange factor activity(GO:2001107)
0.0 0.1 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.0 0.0 GO:1901859 late nucleophagy(GO:0044805) negative regulation of mitochondrial DNA replication(GO:0090298) negative regulation of mitochondrial DNA metabolic process(GO:1901859)
0.0 0.1 GO:0071233 cellular response to leucine(GO:0071233)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0005797 Golgi medial cisterna(GO:0005797)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0005010 insulin-like growth factor-activated receptor activity(GO:0005010)
0.0 0.1 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate 3-phosphatase activity(GO:0052832) inositol monophosphate 4-phosphatase activity(GO:0052833) inositol monophosphate phosphatase activity(GO:0052834)