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GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

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Results for GGACGGA

Z-value: 0.07

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miRNA associated with seed GGACGGA

NamemiRBASE accession
hsa-miR-184
MIMAT0000454

Activity profile of GGACGGA motif

Sorted Z-values of GGACGGA motif

Network of associatons between targets according to the STRING database.

Top targets:

Promoter Score Transcript Gene Gene Info
chr11_+_117178728 0.71 ENST00000532960.5
ENST00000324225.9
SIDT2
SID1 transmembrane family member 2
chr11_-_64778502 0.53 ENST00000681407.1
ENST00000377390.8
SF1
splicing factor 1
chr5_-_173328407 0.34 ENST00000265087.9
STC2
stanniocalcin 2
chr1_-_56579555 0.26 ENST00000371250.4
PLPP3
phospholipid phosphatase 3
chr8_-_140635617 0.16 ENST00000220592.10
AGO2
argonaute RISC catalytic component 2
chr22_-_38872206 0.15 ENST00000407418.8
ENST00000216083.6
CBX6
chromobox 6
chr19_+_10871516 0.09 ENST00000327064.9
ENST00000588947.5
CARM1
coactivator associated arginine methyltransferase 1
chr22_+_40177917 0.08 ENST00000454349.7
ENST00000335727.13
TNRC6B
trinucleotide repeat containing adaptor 6B
chr11_-_796185 0.08 ENST00000533385.5
ENST00000528936.5
ENST00000629634.2
ENST00000625752.2
ENST00000528606.5
ENST00000320230.9
SLC25A22
solute carrier family 25 member 22
chr6_+_117675448 0.08 ENST00000368494.4
NUS1
NUS1 dehydrodolichyl diphosphate synthase subunit
chr1_-_18902520 0.07 ENST00000538839.5
ENST00000290597.9
ENST00000375341.8
ALDH4A1
aldehyde dehydrogenase 4 family member A1
chr12_+_120687118 0.05 ENST00000228506.8
ENST00000412616.2
MLEC
malectin
chr10_+_100535927 0.04 ENST00000299163.7
HIF1AN
hypoxia inducible factor 1 subunit alpha inhibitor
chr12_-_124495252 0.02 ENST00000405201.5
NCOR2
nuclear receptor corepressor 2

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0000389 mRNA 3'-splice site recognition(GO:0000389)
0.1 0.7 GO:0033227 dsRNA transport(GO:0033227)
0.0 0.3 GO:2001256 regulation of store-operated calcium entry(GO:2001256)
0.0 0.1 GO:0003420 regulation of growth plate cartilage chondrocyte proliferation(GO:0003420)
0.0 0.2 GO:0098795 mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing by siRNA(GO:0090625) mRNA cleavage involved in gene silencing(GO:0098795)
0.0 0.1 GO:0010133 proline catabolic process to glutamate(GO:0010133)
0.0 0.3 GO:0008354 germ cell migration(GO:0008354)
0.0 0.1 GO:0019348 dolichol metabolic process(GO:0019348)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0035068 micro-ribonucleoprotein complex(GO:0035068)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0045131 pre-mRNA branch point binding(GO:0045131)
0.1 0.7 GO:0051032 nucleic acid transmembrane transporter activity(GO:0051032) RNA transmembrane transporter activity(GO:0051033)
0.1 0.2 GO:0098808 mRNA cap binding(GO:0098808)
0.0 0.3 GO:0042392 sphingosine-1-phosphate phosphatase activity(GO:0042392)
0.0 0.1 GO:0005280 hydrogen:amino acid symporter activity(GO:0005280)