ISMARA results: GGACGGA

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GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

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Results for GGACGGA

Name	miRBASE accession
hsa-miR-184 miRBase	MIMAT0000454

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Promoter	Score	Transcript	Gene	Gene Info
chr11_+_117178728 Show fit	0.71	ENST00000532960.5 ENST00000324225.9	SIDT2 Ensembl NCBI GeneCards UniProt Show fit	SID1 transmembrane family member 2
chr11_-_64778502 Show fit	0.53	ENST00000681407.1 ENST00000377390.8	SF1 Ensembl NCBI GeneCards UniProt Show fit	splicing factor 1
chr5_-_173328407 Show fit	0.34	ENST00000265087.9	STC2 Ensembl NCBI GeneCards UniProt Show fit	stanniocalcin 2
chr1_-_56579555 Show fit	0.26	ENST00000371250.4	PLPP3 Ensembl NCBI GeneCards UniProt Show fit	phospholipid phosphatase 3
chr8_-_140635617 Show fit	0.16	ENST00000220592.10	AGO2 Ensembl NCBI GeneCards UniProt Show fit	argonaute RISC catalytic component 2
chr22_-_38872206 Show fit	0.15	ENST00000407418.8 ENST00000216083.6	CBX6 Ensembl NCBI GeneCards UniProt Show fit	chromobox 6
chr19_+_10871516 Show fit	0.09	ENST00000327064.9 ENST00000588947.5	CARM1 Ensembl NCBI GeneCards UniProt Show fit	coactivator associated arginine methyltransferase 1
chr22_+_40177917 Show fit	0.08	ENST00000454349.7 ENST00000335727.13	TNRC6B Ensembl NCBI GeneCards UniProt Show fit	trinucleotide repeat containing adaptor 6B
chr11_-_796185 Show fit	0.08	ENST00000533385.5 ENST00000528936.5 ENST00000629634.2 ENST00000625752.2 ENST00000528606.5 ENST00000320230.9	SLC25A22 Ensembl NCBI GeneCards UniProt Show fit	solute carrier family 25 member 22
chr6_+_117675448 Show fit	0.08	ENST00000368494.4	NUS1 Ensembl NCBI GeneCards UniProt Show fit	NUS1 dehydrodolichyl diphosphate synthase subunit

Showing 1 to 10 of 14 entries

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.7	GO:0033227	dsRNA transport(GO:0033227)
0.1	0.5	GO:0000389	mRNA 3'-splice site recognition(GO:0000389)
0.0	0.3	GO:2001256	regulation of store-operated calcium entry(GO:2001256)
0.0	0.3	GO:0008354	germ cell migration(GO:0008354)
0.0	0.2	GO:0098795	mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing by siRNA(GO:0090625) mRNA cleavage involved in gene silencing(GO:0098795)
0.0	0.1	GO:0003420	regulation of growth plate cartilage chondrocyte proliferation(GO:0003420)
0.0	0.1	GO:0010133	proline catabolic process to glutamate(GO:0010133)
0.0	0.1	GO:0019348	dolichol metabolic process(GO:0019348)

Showing 1 to 8 of 8 entries

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0035068	micro-ribonucleoprotein complex(GO:0035068)

Showing 1 to 1 of 1 entries

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.7	GO:0051032	nucleic acid transmembrane transporter activity(GO:0051032) RNA transmembrane transporter activity(GO:0051033)
0.2	0.5	GO:0045131	pre-mRNA branch point binding(GO:0045131)
0.0	0.3	GO:0042392	sphingosine-1-phosphate phosphatase activity(GO:0042392)
0.1	0.2	GO:0098808	mRNA cap binding(GO:0098808)
0.0	0.1	GO:0005280	hydrogen:amino acid symporter activity(GO:0005280)

Showing 1 to 5 of 5 entries