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GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

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Results for GUACCGU

Z-value: 0.01

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miRNA associated with seed GUACCGU

NamemiRBASE accession
hsa-miR-126-3p.2

Activity profile of GUACCGU motif

GNF_1_721_B_lymphoblastsGNF_1_AmygdalaGNF_1_BM-CD34+GNF_1_bronchialepithelialcellsGNF_1_CerebellumPedunclesGNF_1_DRGGNF_1_fetalThyroidGNF_1_kidneyGNF_1_LiverGNF_1_lymphomaburkittsRajiGNF_1_OvaryGNF_1_PB-BDCA4+Dentritic_CellsGNF_1_PB-CD19+BcellsGNF_1_PonsGNF_1_SkeletalMuscleGNF_1_subthalamicnucleusGNF_1_TestisGermCellGNF_1_ThalamusGNF_1_TonsilGNF_1_UterusCorpusGNF_2_ADIPOCYTEGNF_2_AppendixGNF_2_BM-CD71+EarlyErythroidGNF_2_CardiacMyocytesGNF_2_ciliaryganglionGNF_2_fetalbrainGNF_2_globuspallidusGNF_2_leukemiachronicmyelogenous(k562)GNF_2_LungGNF_2_MedullaOblongataGNF_2_PancreasGNF_2_PB-CD4+TcellsGNF_2_PB-CD56+NKCellsGNF_2_PrefrontalCortexGNF_2_skinGNF_2_SuperiorCervicalGanglionGNF_2_TestisInterstitialGNF_2_thymusGNF_2_tracheaGNF_2_WHOLEBLOODNCI60_1_A549_ATCCNCI60_1_CCRF-CEMNCI60_1_HCC-2998NCI60_1_HOP-92NCI60_1_IGROV1_rep1NCI60_1_LOXIMVINCI60_1_MDA-MB-435NCI60_1_NCI-ADR-RESNCI60_1_NCI-H522NCI60_1_OVCAR-3NCI60_1_SF-539NCI60_1_SK-MEL-5NCI60_1_SNB-75NCI60_1_T47DNCI60_1_UACC-62−0.0500.05

Sorted Z-values of GUACCGU motif

−0.01−0.00500.0050.010.0150.02NCI60_1_COLO205GNF_2_MedullaOblongataGNF_1_OccipitalLobeGNF_2_CingulateCortexGNF_1_MedullaOblongataGNF_1_leukemialymphoblastic(molt4)GNF_2_PonsGNF_1_PrefrontalCortexGNF_1_PB-CD4+TcellsGNF_1_ParietalLobeGNF_1_HypothalamusNCI60_1_CCRF-CEMGNF_1_BM-CD33+MyeloidGNF_2_ParietalLobeNCI60_1_HCC-2998GNF_2_WHOLEBLOODGNF_2_721_B_lymphoblastsNCI60_1_DU-145GNF_2_lymphnodeGNF_2_kidneyGNF_2_TestisInterstitialGNF_2_spinalcordGNF_2_TrigeminalGanglionGNF_1_SuperiorCervicalGanglionGNF_1_AdrenalCortexGNF_1_TestisSeminiferousTubuleGNF_1_skinNCI60_1_HCT-15GNF_2_DRGGNF_1_BM-CD34+GNF_1_PancreaticIsletsNCI60_1_HCT-116GNF_2_AdrenalCortexGNF_1_PLACENTANCI60_1_SNB-19GNF_2_PLACENTANCI60_1_SF-539GNF_2_fetalThyroidNCI60_1_RXF-393GNF_1_fetallungGNF_2_OvaryGNF_2_UterusCorpusGNF_1_UterusCorpusGNF_2_ADIPOCYTE

Network of associatons between targets according to the STRING database.

Top targets:

Gene Ontology Analysis