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GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

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Results for UGACAUC

Z-value: 0.15

Motif logo

miRNA associated with seed UGACAUC

NamemiRBASE accession
MIMAT0002805

Activity profile of UGACAUC motif

Sorted Z-values of UGACAUC motif

Network of associatons between targets according to the STRING database.

First level regulatory network of UGACAUC

PNG image of the network

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Promoter Score Transcript Gene Gene Info
chr8_+_55102012 0.89 ENST00000327381.7
XK related 4
chr2_+_30146941 0.69 ENST00000379520.7
ENST00000379519.7
yippee like 5
chrX_+_65667645 0.68 ENST00000360270.7
moesin
chr6_+_116280098 0.65 ENST00000643175.1
ENST00000452085.7
dermatan sulfate epimerase
chr12_+_31959406 0.60 ENST00000540924.5
ENST00000312561.9
retroelement silencing factor 1
chr1_+_46203321 0.52 ENST00000371980.4
leucine rich adaptor protein 1
chr21_-_15064934 0.42 ENST00000400199.5
ENST00000400202.5
ENST00000318948.7
nuclear receptor interacting protein 1
chr2_-_160493799 0.41 ENST00000348849.8
RNA binding motif single stranded interacting protein 1
chr5_+_136028979 0.38 ENST00000442011.7
transforming growth factor beta induced
chr1_-_70205531 0.38 ENST00000370952.4
leucine rich repeat containing 40
chr3_-_113746218 0.35 ENST00000497255.1
ENST00000240922.8
ENST00000478020.1
ENST00000493900.5
N-alpha-acetyltransferase 50, NatE catalytic subunit
chr1_-_224434750 0.35 ENST00000414423.9
ENST00000678917.1
ENST00000678555.1
ENST00000678307.1
WD repeat domain 26
chr9_-_91423819 0.35 ENST00000297689.4
nuclear factor, interleukin 3 regulated
chr6_-_113971120 0.32 ENST00000520895.5
ENST00000521163.5
ENST00000524334.1
ENST00000519065.6
ENST00000368632.6
histone deacetylase 2
chr4_-_102827494 0.31 ENST00000453744.7
ENST00000321805.11
ubiquitin conjugating enzyme E2 D3
chr6_-_24911029 0.31 ENST00000259698.9
ENST00000644621.1
ENST00000644411.1
RHO family interacting cell polarization regulator 2
chr2_-_38751350 0.28 ENST00000409276.5
ENST00000313117.11
ENST00000446327.6
serine and arginine rich splicing factor 7
chr10_+_110919595 0.28 ENST00000369452.9
SHOC2 leucine rich repeat scaffold protein
chr10_-_27154226 0.27 ENST00000427324.5
ENST00000375972.7
ENST00000326799.7
YME1 like 1 ATPase
chr18_+_24113341 0.27 ENST00000540918.2
tetratricopeptide repeat domain 39C
chr14_-_21269451 0.26 ENST00000336053.10
heterogeneous nuclear ribonucleoprotein C
chr3_-_182980531 0.25 ENST00000292782.9
ENST00000632685.1
defective in cullin neddylation 1 domain containing 1
chr1_+_91500827 0.24 ENST00000234626.11
cell division cycle 7
chr21_-_14383125 0.23 ENST00000285667.4
heat shock protein family A (Hsp70) member 13
chr12_-_102120065 0.23 ENST00000552283.6
ENST00000551744.2
nucleoporin 37
chr5_+_109689915 0.21 ENST00000261483.5
mannosidase alpha class 2A member 1
chr14_+_69611586 0.21 ENST00000342745.5
sushi domain containing 6
chr12_-_122526929 0.20 ENST00000331738.12
ENST00000528279.1
ENST00000344591.8
ENST00000526560.6
arginine and serine rich coiled-coil 2
chr12_-_29381141 0.20 ENST00000546839.5
ENST00000552155.5
ENST00000360150.9
ENST00000550353.5
ENST00000548441.1
ENST00000552132.5
ERGIC and golgi 2
chr15_-_49155574 0.20 ENST00000558843.5
ENST00000388901.10
ENST00000542928.5
ENST00000561248.1
ENST00000299259.10
COP9 signalosome subunit 2
chr17_+_47531052 0.20 ENST00000532729.6
ENST00000322157.9
aminopeptidase puromycin sensitive
chr12_+_59689337 0.18 ENST00000261187.8
solute carrier family 16 member 7
chr3_-_72446623 0.18 ENST00000477973.4
RING1 and YY1 binding protein
chr5_+_139293728 0.17 ENST00000510056.5
ENST00000511249.5
ENST00000394805.8
ENST00000503811.5
ENST00000618441.5
matrin 3
chr13_-_77327050 0.16 ENST00000684354.1
ENST00000682321.1
ENST00000683823.1
ENST00000683697.1
ENST00000357337.11
ENST00000544440.7
MYC binding protein 2
chr6_+_21593742 0.15 ENST00000244745.4
SRY-box transcription factor 4
chr20_-_47355657 0.15 ENST00000311275.11
zinc finger MYND-type containing 8
chr9_-_6015607 0.15 ENST00000485372.1
ENST00000259569.6
ENST00000623170.1
RAN binding protein 6
chr1_+_111449442 0.15 ENST00000369722.8
ENST00000483994.1
ATP synthase peripheral stalk-membrane subunit b
chr5_-_173328407 0.15 ENST00000265087.9
stanniocalcin 2
chr13_+_97953652 0.15 ENST00000460070.6
ENST00000481455.6
ENST00000261574.10
ENST00000651721.2
ENST00000493281.6
ENST00000463157.6
ENST00000471898.5
ENST00000489058.6
ENST00000481689.6
importin 5
chrX_-_119852948 0.15 ENST00000276201.7
ENST00000345865.6
UPF3B regulator of nonsense mediated mRNA decay
chr6_+_36027677 0.14 ENST00000622903.4
ENST00000229795.7
mitogen-activated protein kinase 14
chr1_-_113812448 0.14 ENST00000612242.4
ENST00000261441.9
round spermatid basic protein 1
chr15_-_34101807 0.14 ENST00000527822.5
ENST00000528949.1
ENST00000256545.9
ER membrane protein complex subunit 7
chr7_-_138981307 0.14 ENST00000440172.5
ENST00000422774.2
KIAA1549
chr9_+_79571767 0.13 ENST00000376544.7
TLE family member 4, transcriptional corepressor
chr9_+_122264857 0.13 ENST00000344641.8
ENST00000441707.5
ENST00000373723.9
ENST00000373729.5
mitochondrial ribosome recycling factor
chr7_-_41703062 0.13 ENST00000242208.5
inhibin subunit beta A
chr5_-_140346596 0.13 ENST00000230990.7
heparin binding EGF like growth factor
chr16_-_21652598 0.13 ENST00000569602.1
ENST00000268389.6
immunoglobulin superfamily member 6
chr2_+_28751802 0.12 ENST00000296122.10
ENST00000395366.3
protein phosphatase 1 catalytic subunit beta
chr6_-_139374605 0.12 ENST00000618718.1
ENST00000367651.4
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2
chr1_+_26472405 0.11 ENST00000361427.6
high mobility group nucleosomal binding domain 2
chr2_+_197453423 0.11 ENST00000263960.6
coenzyme Q10B
chr9_+_75088498 0.11 ENST00000346234.7
osteoclast stimulating factor 1
chr10_+_68721207 0.11 ENST00000538031.5
ENST00000543719.5
ENST00000539539.5
ENST00000265872.11
ENST00000543225.5
ENST00000536012.5
ENST00000494903.2
cell division cycle and apoptosis regulator 1
chr18_+_9913979 0.11 ENST00000400000.7
ENST00000340541.4
VAMP associated protein A
chr1_+_193121950 0.11 ENST00000367435.5
cell division cycle 73
chr4_-_120066777 0.11 ENST00000296509.11
mitotic arrest deficient 2 like 1
chr16_+_53054973 0.10 ENST00000447540.6
ENST00000615216.4
ENST00000566029.5
chromodomain helicase DNA binding protein 9
chr8_-_73878816 0.10 ENST00000602593.6
ENST00000651945.1
ENST00000419880.7
ENST00000517608.5
ENST00000650817.1
ubiquitin conjugating enzyme E2 W
chr20_+_48921701 0.10 ENST00000371917.5
ADP ribosylation factor guanine nucleotide exchange factor 2
chr1_-_107965009 0.09 ENST00000527011.5
ENST00000370056.9
vav guanine nucleotide exchange factor 3
chr10_+_70815889 0.09 ENST00000373202.8
sphingosine-1-phosphate lyase 1
chr4_+_159267737 0.09 ENST00000264431.8
Rap guanine nucleotide exchange factor 2
chr14_-_37172553 0.09 ENST00000331299.6
solute carrier family 25 member 21
chr15_+_58987652 0.08 ENST00000348370.9
ENST00000559160.1
ring finger protein 111
chr8_-_77000070 0.08 ENST00000357039.9
peroxisomal biogenesis factor 2
chr1_-_21783189 0.07 ENST00000400301.5
ENST00000532737.1
ubiquitin specific peptidase 48
chr8_-_71356653 0.07 ENST00000388742.8
ENST00000388740.4
EYA transcriptional coactivator and phosphatase 1
chr2_-_65130090 0.07 ENST00000398529.7
ENST00000409751.1
ENST00000409892.5
ENST00000409784.8
RAB1A, member RAS oncogene family
chr1_+_28668746 0.07 ENST00000361872.8
ENST00000294409.2
ENST00000373816.6
glucocorticoid modulatory element binding protein 1
chr10_+_110207587 0.07 ENST00000332674.9
ENST00000453116.5
MAX interactor 1, dimerization protein
chr12_+_54549586 0.07 ENST00000243052.8
phosphodiesterase 1B
chr6_-_99425269 0.07 ENST00000647811.1
ENST00000481229.2
ENST00000369239.10
ENST00000681611.1
ENST00000681615.1
ENST00000438806.5
PNN interacting serine and arginine rich protein
chr1_+_50108856 0.06 ENST00000650764.1
ENST00000494555.2
ENST00000371824.7
ENST00000371823.8
ENST00000652693.1
ELAV like RNA binding protein 4
chr18_-_67516707 0.06 ENST00000310045.9
dermatan sulfate epimerase like
chr15_+_68277724 0.06 ENST00000306917.5
fem-1 homolog B
chr8_+_131904071 0.06 ENST00000254624.10
ENST00000522709.5
EFR3 homolog A
chr8_+_31033782 0.06 ENST00000298139.7
WRN RecQ like helicase
chr7_+_12211259 0.05 ENST00000396668.8
ENST00000444443.5
ENST00000396667.7
transmembrane protein 106B
chr12_+_130872037 0.05 ENST00000448750.7
ENST00000541630.5
ENST00000543796.6
ENST00000392369.6
ENST00000535090.5
ENST00000541679.7
ENST00000392367.4
RAN, member RAS oncogene family
chr2_+_165469647 0.05 ENST00000421875.5
ENST00000314499.11
ENST00000409664.5
ENST00000651982.1
cysteine and serine rich nuclear protein 3
chr5_-_107670897 0.05 ENST00000333274.11
ephrin A5
chr1_-_39672080 0.04 ENST00000235628.2
5'-nucleotidase, cytosolic IA
chr7_+_31052297 0.04 ENST00000304166.9
ADCYAP receptor type I
chrX_-_77786198 0.04 ENST00000624032.3
ENST00000624668.3
ENST00000373344.11
ENST00000395603.7
ENST00000624166.3
ENST00000623321.3
ENST00000622960.1
ATRX chromatin remodeler
chr1_+_32108035 0.04 ENST00000373625.8
karyopherin subunit alpha 6
chr18_+_34978244 0.04 ENST00000436190.6
microtubule associated protein RP/EB family member 2
chr3_+_45594727 0.04 ENST00000273317.5
LIM domains containing 1
chr1_-_161177487 0.04 ENST00000367998.5
ENST00000319769.10
beta-1,4-galactosyltransferase 3
chr3_+_150408314 0.04 ENST00000361875.7
TSC22 domain family member 2
chr14_+_90397019 0.04 ENST00000447653.8
ENST00000356978.9
ENST00000626705.2
calmodulin 1
chr5_-_141618957 0.03 ENST00000389054.8
diaphanous related formin 1
chr11_+_105610066 0.03 ENST00000282499.10
ENST00000393127.6
ENST00000527669.1
glutamate ionotropic receptor AMPA type subunit 4
chr2_-_171160833 0.03 ENST00000360843.7
ENST00000431350.7
tousled like kinase 1
chr9_+_117704382 0.03 ENST00000646089.1
ENST00000355622.8
novel protein
toll like receptor 4
chr1_+_65264694 0.02 ENST00000263441.11
ENST00000395325.7
DnaJ heat shock protein family (Hsp40) member C6
chr11_+_9384621 0.02 ENST00000379719.8
ENST00000527431.1
ENST00000630083.1
importin 7
chr4_-_152536045 0.02 ENST00000603548.6
ENST00000281708.10
F-box and WD repeat domain containing 7
chr4_-_110636963 0.01 ENST00000394595.8
paired like homeodomain 2
chr6_-_13711817 0.01 ENST00000011619.6
RAN binding protein 9
chr15_-_61229297 0.01 ENST00000335670.11
RAR related orphan receptor A
chr12_+_112418928 0.01 ENST00000351677.7
ENST00000639857.1
protein tyrosine phosphatase non-receptor type 11
chr18_+_52340179 0.00 ENST00000442544.7
DCC netrin 1 receptor
chr18_+_65751000 0.00 ENST00000397968.4
cadherin 7

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 GO:0022614 membrane to membrane docking(GO:0022614)
0.1 0.3 GO:0006344 maintenance of chromatin silencing(GO:0006344)
0.1 0.3 GO:1903904 negative regulation of establishment of T cell polarity(GO:1903904) negative regulation of Rho guanyl-nucleotide exchange factor activity(GO:2001107)
0.0 0.1 GO:0060279 regulation of ovulation(GO:0060278) positive regulation of ovulation(GO:0060279)
0.0 0.2 GO:1903758 regulation of transcription from RNA polymerase II promoter by histone modification(GO:1903756) negative regulation of transcription from RNA polymerase II promoter by histone modification(GO:1903758)
0.0 0.1 GO:0034402 recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex(GO:0034402)
0.0 0.3 GO:0035694 mitochondrial protein catabolic process(GO:0035694)
0.0 0.2 GO:0018076 N-terminal peptidyl-lysine acetylation(GO:0018076) ascending aorta development(GO:0035905) ascending aorta morphogenesis(GO:0035910)
0.0 0.2 GO:0000727 double-strand break repair via break-induced replication(GO:0000727)
0.0 0.7 GO:0030208 dermatan sulfate biosynthetic process(GO:0030208)
0.0 0.1 GO:0044828 negative regulation by host of viral genome replication(GO:0044828)
0.0 0.2 GO:0006013 mannose metabolic process(GO:0006013)
0.0 0.4 GO:0001542 ovulation from ovarian follicle(GO:0001542)
0.0 0.1 GO:2001184 myoblast differentiation involved in skeletal muscle regeneration(GO:0014835) positive regulation of interleukin-12 secretion(GO:2001184)
0.0 0.4 GO:0070601 N-terminal protein amino acid acetylation(GO:0006474) centromeric sister chromatid cohesion(GO:0070601)
0.0 0.1 GO:0035801 adrenal cortex development(GO:0035801) adrenal cortex formation(GO:0035802) negative regulation of transcription from RNA polymerase II promoter in response to hypoxia(GO:0061428)
0.0 0.2 GO:1901475 pyruvate transport(GO:0006848) pyruvate transmembrane transport(GO:1901475)
0.0 0.1 GO:2000670 positive regulation of dendritic cell apoptotic process(GO:2000670)
0.0 0.3 GO:0006610 ribosomal protein import into nucleus(GO:0006610)
0.0 0.1 GO:0051541 elastin metabolic process(GO:0051541)
0.0 0.1 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.0 0.3 GO:0045116 protein neddylation(GO:0045116)
0.0 0.3 GO:0070935 3'-UTR-mediated mRNA stabilization(GO:0070935)
0.0 0.1 GO:0060743 epithelial cell maturation involved in prostate gland development(GO:0060743)
0.0 0.1 GO:0032790 ribosome disassembly(GO:0032790)
0.0 0.0 GO:1904908 negative regulation of maintenance of sister chromatid cohesion(GO:0034092) negative regulation of maintenance of mitotic sister chromatid cohesion(GO:0034183) maintenance of mitotic sister chromatid cohesion, telomeric(GO:0099403) mitotic sister chromatid cohesion, telomeric(GO:0099404) regulation of maintenance of mitotic sister chromatid cohesion, telomeric(GO:1904907) negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric(GO:1904908)
0.0 0.1 GO:2001256 regulation of store-operated calcium entry(GO:2001256)
0.0 0.2 GO:0000338 protein deneddylation(GO:0000338)
0.0 0.1 GO:0090267 positive regulation of mitotic cell cycle spindle assembly checkpoint(GO:0090267)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0031415 NatA complex(GO:0031415)
0.0 0.1 GO:0043512 inhibin complex(GO:0043511) inhibin A complex(GO:0043512)
0.0 0.2 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.7 GO:0001931 uropod(GO:0001931) cell trailing edge(GO:0031254)
0.0 0.3 GO:0060171 stereocilium membrane(GO:0060171)
0.0 0.4 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 0.2 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.1 GO:0032279 axonemal microtubule(GO:0005879) asymmetric synapse(GO:0032279)
0.0 0.3 GO:0016580 Sin3 complex(GO:0016580)
0.0 0.1 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.0 GO:0031933 telomeric heterochromatin(GO:0031933)
0.0 0.2 GO:0031080 nuclear pore outer ring(GO:0031080)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0047757 chondroitin-glucuronate 5-epimerase activity(GO:0047757)
0.1 0.2 GO:0005477 pyruvate secondary active transmembrane transporter activity(GO:0005477)
0.0 0.3 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.4 GO:0004596 peptide alpha-N-acetyltransferase activity(GO:0004596)
0.0 0.1 GO:0017018 myosin phosphatase activity(GO:0017018)
0.0 0.3 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.0 0.1 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.2 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.0 0.1 GO:0032184 SUMO polymer binding(GO:0032184)
0.0 0.3 GO:0032041 histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041)
0.0 0.1 GO:0070336 flap-structured DNA binding(GO:0070336)
0.0 0.1 GO:0070699 type II activin receptor binding(GO:0070699)
0.0 0.4 GO:0035259 glucocorticoid receptor binding(GO:0035259)
0.0 0.1 GO:0048039 ubiquinone binding(GO:0048039)
0.0 0.0 GO:0015616 DNA translocase activity(GO:0015616)
0.0 0.3 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.1 GO:0051525 NFAT protein binding(GO:0051525)
0.0 0.0 GO:0005169 neurotrophin TRKB receptor binding(GO:0005169)
0.0 0.1 GO:0048101 calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity(GO:0048101)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 PID RETINOIC ACID PATHWAY Retinoic acid receptors-mediated signaling
0.0 0.8 PID ER NONGENOMIC PATHWAY Plasma membrane estrogen receptor signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.7 REACTOME RECYCLING PATHWAY OF L1 Genes involved in Recycling pathway of L1
0.0 0.2 REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS Genes involved in Bile salt and organic anion SLC transporters
0.0 0.1 REACTOME GLYCOPROTEIN HORMONES Genes involved in Glycoprotein hormones