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GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

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Results for UGACAUC

Z-value: 0.15

Motif logo

miRNA associated with seed UGACAUC

NamemiRBASE accession
MIMAT0002805

Activity profile of UGACAUC motif

GNF_1_721_B_lymphoblastsGNF_1_AmygdalaGNF_1_BM-CD34+GNF_1_bronchialepithelialcellsGNF_1_CerebellumPedunclesGNF_1_DRGGNF_1_fetalThyroidGNF_1_kidneyGNF_1_LiverGNF_1_lymphomaburkittsRajiGNF_1_OvaryGNF_1_PB-BDCA4+Dentritic_CellsGNF_1_PB-CD19+BcellsGNF_1_PonsGNF_1_SkeletalMuscleGNF_1_subthalamicnucleusGNF_1_TestisGermCellGNF_1_ThalamusGNF_1_TonsilGNF_1_UterusCorpusGNF_2_ADIPOCYTEGNF_2_AppendixGNF_2_BM-CD71+EarlyErythroidGNF_2_CardiacMyocytesGNF_2_ciliaryganglionGNF_2_fetalbrainGNF_2_globuspallidusGNF_2_leukemiachronicmyelogenous(k562)GNF_2_LungGNF_2_MedullaOblongataGNF_2_PancreasGNF_2_PB-CD4+TcellsGNF_2_PB-CD56+NKCellsGNF_2_PrefrontalCortexGNF_2_skinGNF_2_SuperiorCervicalGanglionGNF_2_TestisInterstitialGNF_2_thymusGNF_2_tracheaGNF_2_WHOLEBLOODNCI60_1_A549_ATCCNCI60_1_CCRF-CEMNCI60_1_HCC-2998NCI60_1_HOP-92NCI60_1_IGROV1_rep1NCI60_1_LOXIMVINCI60_1_MDA-MB-435NCI60_1_NCI-ADR-RESNCI60_1_NCI-H522NCI60_1_OVCAR-3NCI60_1_SF-539NCI60_1_SK-MEL-5NCI60_1_SNB-75NCI60_1_T47DNCI60_1_UACC-62−0.1−0.0500.050.1

Sorted Z-values of UGACAUC motif

−0.4−0.3−0.2−0.100.10.20.30.4GNF_1_LungNCI60_1_MCF7GNF_1_kidneyNCI60_1_UACC-62GNF_2_fetallungGNF_2_UterusCorpusNCI60_1_MDA-MB-231_ATCCGNF_1_fetallungGNF_2_ThyroidGNF_1_tracheaGNF_1_AmygdalaGNF_2_HypothalamusGNF_1_fetalThyroidGNF_1_PLACENTANCI60_1_EKVXGNF_2_AmygdalaGNF_1_TestisGermCellGNF_2_lymphnodeNCI60_1_MOLT-4GNF_2_leukemialymphoblastic(molt4)GNF_2_TestisSeminiferousTubuleGNF_1_UterusCorpusGNF_1_lymphnodeNCI60_1_KM12GNF_2_TONGUEGNF_2_PrefrontalCortexNCI60_1_SRNCI60_1_NCI-H322MNCI60_1_SW-620GNF_1_TestisInterstitialGNF_1_TestisSeminiferousTubuleGNF_2_OvaryGNF_2_TonsilNCI60_1_U251NCI60_1_CCRF-CEMNCI60_1_SN12CGNF_1_PB-CD56+NKCellsNCI60_1_DU-145NCI60_1_SK-OV-3NCI60_1_HL-60GNF_1_WHOLEBLOODNCI60_1_IGROV1_rep1GNF_2_WHOLEBLOODGNF_2_PancreaticIslets

Network of associatons between targets according to the STRING database.

First level regulatory network of UGACAUC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: