ISMARA results: ZBED1

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GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

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Results for ZBED1

Z-value: 0.37

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Transcription factors associated with ZBED1

Gene Symbol	Gene ID	Gene Info
ZBED1 Ensembl NCBI GeneCards UniProt	ENSG00000214717.12	ZBED1
ZBED1 Ensembl NCBI GeneCards UniProt	ENSG00000214717.12	ZBED1

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
ZBED1	hg38_v1_chrX_-_2500555_2500580	0.29	1.9e-05	Click!

Activity profile of ZBED1 motif

Sorted Z-values of ZBED1 motif

Network of associatons between targets according to the STRING database.

First level regulatory network of ZBED1

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Promoter	Score	Transcript	Gene	Gene Info
chr19_+_54137740 Show fit	13.48	ENST00000644245.1 ENST00000646002.1 ENST00000221232.11 ENST00000440571.6 ENST00000617930.2	CNOT3 Ensembl NCBI GeneCards UniProt Show fit	CCR4-NOT transcription complex subunit 3
chr1_+_35557768 Show fit	5.41	ENST00000356090.8 ENST00000373243.7	NCDN Ensembl NCBI GeneCards UniProt Show fit	neurochondrin
chr17_+_4940008 Show fit	5.40	ENST00000571816.5 ENST00000573404.5 ENST00000576452.5	RNF167 Ensembl NCBI GeneCards UniProt Show fit	ring finger protein 167
chr17_+_4940259 Show fit	5.32	ENST00000262482.11	RNF167 Ensembl NCBI GeneCards UniProt Show fit	ring finger protein 167
chr17_+_4940118 Show fit	5.12	ENST00000572430.5	RNF167 Ensembl NCBI GeneCards UniProt Show fit	ring finger protein 167
chr22_+_19714450 Show fit	4.94	ENST00000455784.7 ENST00000406395.5	SEPTIN5 Ensembl NCBI GeneCards UniProt Show fit	septin 5
chr17_+_4940384 Show fit	4.83	ENST00000576229.5	RNF167 Ensembl NCBI GeneCards UniProt Show fit	ring finger protein 167
chr17_+_4940359 Show fit	4.76	ENST00000575111.5	RNF167 Ensembl NCBI GeneCards UniProt Show fit	ring finger protein 167
chr17_-_4940023 Show fit	4.73	ENST00000225665.12 ENST00000544061.6	SLC25A11 Ensembl NCBI GeneCards UniProt Show fit	solute carrier family 25 member 11
chr7_+_139341311 Show fit	3.93	ENST00000297534.7 ENST00000541515.3	FMC1 Ensembl NCBI GeneCards UniProt Show fit FMC1-LUC7L2 Ensembl NCBI GeneCards UniProt Show fit	formation of mitochondrial complex V assembly factor 1 homolog FMC1-LUC7L2 readthrough

Showing 1 to 10 of 16 entries

Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	27.8	GO:0000209	protein polyubiquitination(GO:0000209)
0.6	13.5	GO:0001829	trophectodermal cell differentiation(GO:0001829)
1.4	6.9	GO:0015742	alpha-ketoglutarate transport(GO:0015742)
0.1	5.4	GO:0045453	bone resorption(GO:0045453)
0.3	3.9	GO:0061469	regulation of type B pancreatic cell proliferation(GO:0061469)
0.4	3.1	GO:0045347	negative regulation of MHC class II biosynthetic process(GO:0045347)
0.0	1.4	GO:0046856	phosphatidylinositol dephosphorylation(GO:0046856)
0.2	1.3	GO:0010724	regulation of definitive erythrocyte differentiation(GO:0010724)

Showing 1 to 8 of 8 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
1.1	13.5	GO:0030015	CCR4-NOT core complex(GO:0030015)
0.0	2.4	GO:1904813	ficolin-1-rich granule(GO:0101002) ficolin-1-rich granule lumen(GO:1904813)

Showing 1 to 2 of 2 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	27.8	GO:0004842	ubiquitin-protein transferase activity(GO:0004842)
2.3	6.9	GO:0015140	malate transmembrane transporter activity(GO:0015140)
0.0	3.1	GO:0001078	transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078)
0.1	1.4	GO:0052629	phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)

Showing 1 to 4 of 4 entries

Gene overrepresentation in curated gene sets: canonical pathways category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	2.4	PID P53 REGULATION PATHWAY	p53 pathway

Showing 1 to 1 of 1 entries

Gene overrepresentation in curated gene sets: REACTOME pathways category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.4	12.6	REACTOME DEADENYLATION OF MRNA	Genes involved in Deadenylation of mRNA
0.1	6.9	REACTOME GLUCONEOGENESIS	Genes involved in Gluconeogenesis
0.1	3.1	REACTOME MRNA 3 END PROCESSING	Genes involved in mRNA 3'-end processing

Showing 1 to 3 of 3 entries

Results for ZBED1

Z-value: 0.37

Motif logo

Transcription factors associated with ZBED1

Activity-expression correlation:

Activity profile of ZBED1 motif

Sorted Z-values of ZBED1 motif

Network of associatons between targets according to the STRING database.

First level regulatory network of ZBED1

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Top targets:

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: