Project
avrg: GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
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Results for UUUUUGC
Z-value: 0.24
Motif logo
miRNA associated with seed UUUUUGC
| Name | miRBASE accession |
|---|---|
|
hsa-miR-129-5p
|
MIMAT0000242 |
Network of associatons between targets according to the STRING database.
First level regulatory network of UUUUUGC
| Promoter | Score | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr1_-_20486197 Show fit | 0.95 |
ENST00000375078.4
|
calcium/calmodulin dependent protein kinase II inhibitor 1 |
|
| chr4_-_152536045 Show fit | 0.21 |
ENST00000603548.6
ENST00000281708.10 |
F-box and WD repeat domain containing 7 |
|
| chr14_-_51096029 Show fit | 0.19 |
ENST00000298355.7
|
tripartite motif containing 9 |
|
| chr17_-_28951285 Show fit | 0.18 |
ENST00000577226.5
|
PHD finger protein 12 |
|
| chr15_-_50765656 Show fit | 0.16 |
ENST00000261854.10
|
signal peptide peptidase like 2A |
|
| chr8_+_42896883 Show fit | 0.15 |
ENST00000307602.9
|
hook microtubule tethering protein 3 |
|
| chr22_+_39994926 Show fit | 0.14 |
ENST00000333407.11
|
family with sequence similarity 83 member F |
|
| chr9_+_112486819 Show fit | 0.11 |
ENST00000337530.11
|
KIAA1958 |
|
| chr13_+_57631735 Show fit | 0.10 |
ENST00000377918.8
|
protocadherin 17 |
|
| chr5_+_126600913 Show fit | 0.10 |
ENST00000297540.5
|
phosphorylated adaptor for RNA export |
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.2 | GO:0035544 | negative regulation of SNARE complex assembly(GO:0035544) |
| 0.1 | 0.2 | GO:2000639 | regulation of SREBP signaling pathway(GO:2000638) negative regulation of SREBP signaling pathway(GO:2000639) |
| 0.0 | 0.2 | GO:0022027 | interkinetic nuclear migration(GO:0022027) |
| 0.0 | 0.1 | GO:0006408 | snRNA export from nucleus(GO:0006408) |
| 0.0 | 0.1 | GO:0007206 | phospholipase C-activating G-protein coupled glutamate receptor signaling pathway(GO:0007206) |
| 0.0 | 0.0 | GO:0031548 | regulation of brain-derived neurotrophic factor receptor signaling pathway(GO:0031548) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0070695 | FHF complex(GO:0070695) |
| 0.0 | 0.2 | GO:0071458 | integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) |
| 0.0 | 0.2 | GO:1990452 | Parkin-FBXW7-Cul1 ubiquitin ligase complex(GO:1990452) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.3 | 0.9 | GO:0008427 | calcium-dependent protein kinase inhibitor activity(GO:0008427) |
| 0.0 | 0.2 | GO:0050816 | phosphothreonine binding(GO:0050816) |
| 0.0 | 0.2 | GO:0042500 | aspartic endopeptidase activity, intramembrane cleaving(GO:0042500) |
| 0.0 | 0.2 | GO:0001222 | transcription corepressor binding(GO:0001222) |
| 0.0 | 0.0 | GO:0048403 | brain-derived neurotrophic factor binding(GO:0048403) |