hg38_v1_chr14_-_59630806_59630820	9.12411	BRCA1	ENST00000342503.8|RTN1|ENSG00000139970.17|reticulon 1
hg38_v1_chr14_-_59630582_59630685	8.67685	BRCA1	ENST00000395090.5|RTN1|ENSG00000139970.17|reticulon 1
hg38_v1_chr2_-_49973939_49974014	5.80246	BRCA1	ENST00000630656.1|NRXN1|ENSG00000179915.24|neurexin 1
hg38_v1_chr3_-_127736329_127736380	4.97248	BRCA1	ENST00000398101.7|MGLL|ENSG00000074416.15|monoglyceride lipase
hg38_v1_chr1_+_84181630_84181667	4.01354	BRCA1	ENST00000610457.1|PRKACB|ENSG00000142875.19|protein kinase cAMP-activated catalytic subunit beta
hg38_v1_chr19_-_12801787_12801807	3.35028	BRCA1	ENST00000334482.9|PRDX2|ENSG00000167815.12|peroxiredoxin 2	ENST00000301522.3|PRDX2|ENSG00000167815.12|peroxiredoxin 2
hg38_v1_chr1_+_159171607_159171759	3.24748	BRCA1	ENST00000368124.8|CADM3|ENSG00000162706.13|cell adhesion molecule 3	ENST00000368125.9|CADM3|ENSG00000162706.13|cell adhesion molecule 3	ENST00000416746.1|CADM3|ENSG00000162706.13|cell adhesion molecule 3
hg38_v1_chr2_-_49974083_49974123	3.15132	BRCA1	ENST00000636345.1|NRXN1|ENSG00000179915.24|neurexin 1
hg38_v1_chr1_-_170074568_170074738	2.93807	BRCA1	ENST00000367767.5|KIFAP3|ENSG00000075945.13|kinesin associated protein 3	ENST00000361580.7|KIFAP3|ENSG00000075945.13|kinesin associated protein 3	ENST00000538366.5|KIFAP3|ENSG00000075945.13|kinesin associated protein 3
hg38_v1_chr19_+_55675191_55675289	2.37072	BRCA1	ENST00000270460.11|EPN1|ENSG00000063245.15|epsin 1	ENST00000085079.11|EPN1|ENSG00000063245.15|epsin 1
hg38_v1_chr11_+_118077067_118077130	1.91858	BRCA1	ENST00000522307.5|TMPRSS4|ENSG00000137648.19|transmembrane serine protease 4	ENST00000523251.5|TMPRSS4|ENSG00000137648.19|transmembrane serine protease 4	ENST00000437212.8|TMPRSS4|ENSG00000137648.19|transmembrane serine protease 4	ENST00000522824.5|TMPRSS4|ENSG00000137648.19|transmembrane serine protease 4	ENST00000522151.5|TMPRSS4|ENSG00000137648.19|transmembrane serine protease 4
hg38_v1_chr20_+_58907981_58908019	1.88058	BRCA1	ENST00000656419.1|GNAS|ENSG00000087460.29|GNAS complex locus
hg38_v1_chr11_+_118077009_118077038	1.87133	BRCA1	ENST00000616579.4|TMPRSS4|ENSG00000137648.19|transmembrane serine protease 4	ENST00000534111.5|TMPRSS4|ENSG00000137648.19|transmembrane serine protease 4
hg38_v1_chr2_-_151261839_151261870	1.84492	BRCA1	ENST00000331426.6|RBM43|ENSG00000184898.7|RNA binding motif protein 43
hg38_v1_chr8_-_80171106_80171200	1.84464	BRCA1	ENST00000519303.6|TPD52|ENSG00000076554.16|tumor protein D52
hg38_v1_chr8_+_22605018_22605071	1.79873	BRCA1	ENST00000389279.7|CCAR2|ENSG00000158941.16|cell cycle and apoptosis regulator 2
hg38_v1_chr19_-_34677157_34677161	1.77839	BRCA1	ENST00000601241.6|SCGB2B2|ENSG00000205209.8|secretoglobin family 2B member 2
hg38_v1_chrX_+_10156960_10156992	1.75112	BRCA1	ENST00000380833.9|CLCN4|ENSG00000073464.13|chloride voltage-gated channel 4
hg38_v1_chr6_+_12717660_12717671	1.64213	BRCA1	ENST00000674637.1|PHACTR1|ENSG00000112137.18|phosphatase and actin regulator 1
hg38_v1_chr11_-_61429934_61429992	1.63546	BRCA1	ENST00000541963.5|CPSF7|ENSG00000149532.16|cleavage and polyadenylation specific factor 7	ENST00000477890.6|CPSF7|ENSG00000149532.16|cleavage and polyadenylation specific factor 7	ENST00000439958.8|CPSF7|ENSG00000149532.16|cleavage and polyadenylation specific factor 7
hg38_v1_chr4_-_48780242_48780318	1.63072	BRCA1	ENST00000507711.5|FRYL|ENSG00000075539.15|FRY like transcription coactivator	ENST00000358350.9|FRYL|ENSG00000075539.15|FRY like transcription coactivator
hg38_v1_chr3_-_142448060_142448074	1.50044	BRCA1	ENST00000264951.8|XRN1|ENSG00000114127.11|5'-3' exoribonuclease 1
hg38_v1_chr11_-_61430008_61430031	1.49943	BRCA1	ENST00000394888.8|CPSF7|ENSG00000149532.16|cleavage and polyadenylation specific factor 7
hg38_v1_chr1_-_160262522_160262533	1.40535	BRCA1	ENST00000440682.5|DCAF8|ENSG00000132716.19|DDB1 and CUL4 associated factor 8
hg38_v1_chr3_-_142448028_142448047	1.39788	BRCA1	ENST00000392981.7|XRN1|ENSG00000114127.11|5'-3' exoribonuclease 1
hg38_v1_chr1_-_160262501_160262514	1.37689	BRCA1	ENST00000447377.5|DCAF8|ENSG00000132716.19|DDB1 and CUL4 associated factor 8
hg38_v1_chr10_-_73625951_73626016	1.36543	BRCA1	ENST00000433394.1|USP54|ENSG00000166348.19|ubiquitin specific peptidase 54	ENST00000422491.7|USP54|ENSG00000166348.19|ubiquitin specific peptidase 54
hg38_v1_chr10_-_100529854_100530000	1.32668	BRCA1	ENST00000370320.4|NDUFB8|ENSG00000166136.16|NADH:ubiquinone oxidoreductase subunit B8	ENST00000299166.9|NDUFB8|ENSG00000166136.16|NADH:ubiquinone oxidoreductase subunit B8	ENST00000370322.5|NDUFB8|ENSG00000166136.16|NADH:ubiquinone oxidoreductase subunit B8
hg38_v1_chr11_+_33258304_33258384	1.32071	BRCA1	ENST00000531504.5|HIPK3|ENSG00000110422.12|homeodomain interacting protein kinase 3	ENST00000456517.2|HIPK3|ENSG00000110422.12|homeodomain interacting protein kinase 3
hg38_v1_chr6_-_158999748_158999839	1.29666	BRCA1	ENST00000449822.5|RSPH3|ENSG00000130363.13|radial spoke head 3
hg38_v1_chr11_+_73308237_73308317	1.28033	BRCA1	ENST00000263674.4|ARHGEF17|ENSG00000110237.5|Rho guanine nucleotide exchange factor 17
hg38_v1_chr6_-_159000174_159000222	1.27845	BRCA1	ENST00000367069.7|RSPH3|ENSG00000130363.13|radial spoke head 3
hg38_v1_chr2_+_203014842_203014888	1.21534	BRCA1	ENST00000683969.1|NBEAL1|ENSG00000144426.19|neurobeachin like 1	ENST00000449802.5|NBEAL1|ENSG00000144426.19|neurobeachin like 1
hg38_v1_chr13_-_49444004_49444076	1.14476	BRCA1	ENST00000410043.5|CAB39L|ENSG00000102547.19|calcium binding protein 39 like	ENST00000409308.6|CAB39L|ENSG00000102547.19|calcium binding protein 39 like
hg38_v1_chr9_-_21031614_21031653	1.1411	BRCA1	ENST00000495827.3|HACD4|ENSG00000188921.14|3-hydroxyacyl-CoA dehydratase 4
hg38_v1_chr7_-_78771265_78771344	1.13332	BRCA1	ENST00000630991.2|MAGI2|ENSG00000187391.22|membrane associated guanylate kinase, WW and PDZ domain containing 2	ENST00000629359.2|MAGI2|ENSG00000187391.22|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg38_v1_chr12_+_57459782_57459796	1.11138	BRCA1	ENST00000228682.7|GLI1|ENSG00000111087.10|GLI family zinc finger 1
hg38_v1_chr11_-_61429715_61429927	1.07897	BRCA1	ENST00000449811.5|CPSF7|ENSG00000149532.16|cleavage and polyadenylation specific factor 7	ENST00000413232.5|CPSF7|ENSG00000149532.16|cleavage and polyadenylation specific factor 7	ENST00000340437.8|CPSF7|ENSG00000149532.16|cleavage and polyadenylation specific factor 7	ENST00000539952.5|CPSF7|ENSG00000149532.16|cleavage and polyadenylation specific factor 7	ENST00000544585.5|CPSF7|ENSG00000149532.16|cleavage and polyadenylation specific factor 7	ENST00000450000.5|CPSF7|ENSG00000149532.16|cleavage and polyadenylation specific factor 7
hg38_v1_chr16_-_740934_740978	1.05091	BRCA1	ENST00000540986.5|CIAO3|ENSG00000103245.14|cytosolic iron-sulfur assembly component 3
hg38_v1_chr10_-_49269_49296	1.00762	BRCA1	ENST00000562809.1|TUBB8|ENSG00000261456.6|tubulin beta 8 class VIII	ENST00000568866.5|TUBB8|ENSG00000261456.6|tubulin beta 8 class VIII	ENST00000561967.1|TUBB8|ENSG00000261456.6|tubulin beta 8 class VIII	ENST00000568584.6|TUBB8|ENSG00000261456.6|tubulin beta 8 class VIII
hg38_v1_chr16_-_740980_741021	1.00205	BRCA1	ENST00000251588.7|CIAO3|ENSG00000103245.14|cytosolic iron-sulfur assembly component 3
hg38_v1_chr11_-_27700447_27700461	0.965633	BRCA1	ENST00000356660.9|BDNF|ENSG00000176697.20|brain derived neurotrophic factor
hg38_v1_chr14_+_20190896_20190896	0.933552	BRCA1	ENST00000641879.2|OR11G2|ENSG00000196832.5|olfactory receptor family 11 subfamily G member 2	ENST00000641682.1|OR11G2|ENSG00000196832.5|olfactory receptor family 11 subfamily G member 2
hg38_v1_chr1_-_160262540_160262565	0.860658	BRCA1	ENST00000368074.6|DCAF8|ENSG00000132716.19|DDB1 and CUL4 associated factor 8
hg38_v1_chr1_-_160262407_160262494	0.833819	BRCA1	ENST00000419626.1|DCAF8|ENSG00000132716.19|DDB1 and CUL4 associated factor 8	ENST00000610139.5|DCAF8|ENSG00000132716.19|DDB1 and CUL4 associated factor 8	ENST00000475733.5|DCAF8|ENSG00000132716.19|DDB1 and CUL4 associated factor 8	ENST00000407642.6|DCAF8|ENSG00000132716.19|DDB1 and CUL4 associated factor 8	ENST00000368073.7|DCAF8|ENSG00000132716.19|DDB1 and CUL4 associated factor 8	ENST00000326837.6|DCAF8|ENSG00000132716.19|DDB1 and CUL4 associated factor 8
hg38_v1_chr1_+_62597510_62597526	0.785983	BRCA1	ENST00000371129.4|ANGPTL3|ENSG00000132855.5|angiopoietin like 3
hg38_v1_chr14_-_68794597_68794736	0.729882	BRCA1	ENST00000336440.3|ZFP36L1|ENSG00000185650.10|ZFP36 ring finger protein like 1
hg38_v1_chr18_-_49557_49557	0.60174	BRCA1	ENST00000308911.8|TUBB8B|ENSG00000173213.9|tubulin beta 8B
hg38_v1_chr14_+_88385643_88385711	0.561967	BRCA1	ENST00000393545.9|SPATA7|ENSG00000042317.17|spermatogenesis associated 7	ENST00000356583.9|SPATA7|ENSG00000042317.17|spermatogenesis associated 7	ENST00000555401.5|SPATA7|ENSG00000042317.17|spermatogenesis associated 7	ENST00000553885.5|SPATA7|ENSG00000042317.17|spermatogenesis associated 7
hg38_v1_chr11_-_27700472_27700494	0.552673	BRCA1	ENST00000418212.5|BDNF|ENSG00000176697.20|brain derived neurotrophic factor	ENST00000533246.5|BDNF|ENSG00000176697.20|brain derived neurotrophic factor
hg38_v1_chr13_+_27251569_27251604	0.526795	BRCA1	ENST00000272274.8|RPL21|ENSG00000122026.11|ribosomal protein L21	ENST00000319826.8|RPL21|ENSG00000122026.11|ribosomal protein L21	ENST00000326092.8|RPL21|ENSG00000122026.11|ribosomal protein L21
hg38_v1_chr19_+_44891206_44891289	0.518396	BRCA1	ENST00000405636.6|TOMM40|ENSG00000130204.13|translocase of outer mitochondrial membrane 40	ENST00000252487.9|TOMM40|ENSG00000130204.13|translocase of outer mitochondrial membrane 40	ENST00000592434.5|TOMM40|ENSG00000130204.13|translocase of outer mitochondrial membrane 40	ENST00000589649.1|TOMM40|ENSG00000130204.13|translocase of outer mitochondrial membrane 40	ENST00000426677.7|TOMM40|ENSG00000130204.13|translocase of outer mitochondrial membrane 40
hg38_v1_chr4_+_625555_625617	0.492141	BRCA1	ENST00000496514.6|PDE6B|ENSG00000133256.13|phosphodiesterase 6B	ENST00000255622.10|PDE6B|ENSG00000133256.13|phosphodiesterase 6B
hg38_v1_chr11_+_101914997_101915036	0.453519	BRCA1	ENST00000263468.13|CEP126|ENSG00000110318.15|centrosomal protein 126
hg38_v1_chr18_+_44697118_44697165	0.442426	BRCA1	ENST00000677077.1|SETBP1|ENSG00000152217.20|SET binding protein 1
hg38_v1_chr13_+_29428709_29428726	0.431114	BRCA1	ENST00000542829.1|MTUS2|ENSG00000132938.22|microtubule associated scaffold protein 2
hg38_v1_chr20_-_49913693_49913739	0.429049	BRCA1	ENST00000422556.1|SPATA2|ENSG00000158480.11|spermatogenesis associated 2
hg38_v1_chr11_+_1099730_1099770	0.394629	BRCA1	ENST00000674892.1|MUC2|ENSG00000198788.9|mucin 2, oligomeric mucus/gel-forming
hg38_v1_chr19_-_47886308_47886349	0.377525	BRCA1	ENST00000222002.4|SULT2A1|ENSG00000105398.4|sulfotransferase family 2A member 1
hg38_v1_chr17_-_43661915_43661929	0.350753	BRCA1	ENST00000318579.9|MEOX1|ENSG00000005102.14|mesenchyme homeobox 1	ENST00000393661.2|MEOX1|ENSG00000005102.14|mesenchyme homeobox 1
hg38_v1_chr4_-_184649436_184649509	0.307403	BRCA1	ENST00000308394.9|CASP3|ENSG00000164305.19|caspase 3	ENST00000517513.5|CASP3|ENSG00000164305.19|caspase 3	ENST00000447121.2|CASP3|ENSG00000164305.19|caspase 3	ENST00000393588.8|CASP3|ENSG00000164305.19|caspase 3	ENST00000523916.5|CASP3|ENSG00000164305.19|caspase 3
hg38_v1_chr2_-_144517663_144518026	0.249403	BRCA1	ENST00000427902.5|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2	ENST00000462355.2|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2	ENST00000470879.5|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2	ENST00000409487.7|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2	ENST00000435831.5|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2	ENST00000630572.2|ZEB2|ENSG00000169554.22|zinc finger E-box binding homeobox 2
hg38_v1_chr13_+_29428603_29428641	0.219782	BRCA1	ENST00000380808.6|MTUS2|ENSG00000132938.22|microtubule associated scaffold protein 2
hg38_v1_chr3_-_116445458_116445533	0.171685	BRCA1	ENST00000490035.7|LSAMP|ENSG00000185565.12|limbic system associated membrane protein
hg38_v1_chr12_-_116881062_116881117	0.138009	BRCA1	ENST00000550505.5|HRK|ENSG00000135116.9|harakiri, BCL2 interacting protein
hg38_v1_chr19_-_39834127_39834201	0.130583	BRCA1	ENST00000601972.1|DYRK1B|ENSG00000105204.14|dual specificity tyrosine phosphorylation regulated kinase 1B	ENST00000430012.6|DYRK1B|ENSG00000105204.14|dual specificity tyrosine phosphorylation regulated kinase 1B	ENST00000323039.10|DYRK1B|ENSG00000105204.14|dual specificity tyrosine phosphorylation regulated kinase 1B	ENST00000348817.7|DYRK1B|ENSG00000105204.14|dual specificity tyrosine phosphorylation regulated kinase 1B
hg38_v1_chr12_-_116881431_116881455	0.117515	BRCA1	ENST00000257572.5|HRK|ENSG00000135116.9|harakiri, BCL2 interacting protein
hg38_v1_chr13_-_51974775_51974775	0.106698	BRCA1	ENST00000674147.1|ATP7B|ENSG00000123191.16|ATPase copper transporting beta
hg38_v1_chr13_+_27251545_27251566	0.0192472	BRCA1	ENST00000311549.11|RPL21|ENSG00000122026.11|ribosomal protein L21
