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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G12610

Z-value: 1.26

Transcription factors associated with AT1G12610

Gene Symbol Gene ID Gene Info
AT1G12610
AT1G12610 Integrase-type DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
DDF1arTal_v1_Chr1_-_4291017_4291017-0.535.4e-02Click!

Activity profile of AT1G12610 motif

Sorted Z-values of AT1G12610 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_+_5209717_5209717 3.55 AT5G15960.1
KIN1
stress-responsive protein (KIN1) / stress-induced protein (KIN1)
arTal_v1_Chr5_+_21240717_21240717 3.23 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
arTal_v1_Chr1_+_3019639_3019639 2.99 AT1G09350.1
GolS3
galactinol synthase 3
arTal_v1_Chr1_+_3020221_3020221 2.84 AT1G09350.2
GolS3
galactinol synthase 3
arTal_v1_Chr5_+_5211719_5211719 2.72 AT5G15970.1
KIN2
stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)
arTal_v1_Chr1_-_5765798_5765798 2.56 AT1G16850.1
AT1G16850
transmembrane protein
arTal_v1_Chr4_+_14954204_14954204 2.52 AT4G30650.1
AT4G30650
Low temperature and salt responsive protein family
arTal_v1_Chr4_-_15954803_15954803 2.42 AT4G33070.1
AT4G33070
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
arTal_v1_Chr3_+_18940643_18940643 2.27 AT3G50970.1
LTI30
dehydrin family protein
arTal_v1_Chr5_-_22712441_22712441 2.24 AT5G56080.1
NAS2
nicotianamine synthase 2
arTal_v1_Chr2_+_15106940_15106940 1.85 AT2G35960.1
NHL12
NDR1/HIN1-like 12
arTal_v1_Chr5_-_7054281_7054281 1.77 AT5G20830.3
SUS1
sucrose synthase 1
arTal_v1_Chr5_-_7054713_7054713 1.75 AT5G20830.1
SUS1
sucrose synthase 1
arTal_v1_Chr5_-_7055398_7055398 1.72 AT5G20830.2
SUS1
sucrose synthase 1
arTal_v1_Chr4_-_13019400_13019400 1.65 AT4G25480.1
DREB1A
dehydration response element B1A
arTal_v1_Chr2_-_12415661_12415661 1.64 AT2G28900.1
OEP16-1
outer plastid envelope protein 16-1
arTal_v1_Chr4_+_12827856_12827937 1.63 AT4G24960.1
AT4G24960.3
AT4G24960.2
HVA22D
HVA22 homologue D
arTal_v1_Chr1_-_7089606_7089606 1.63 AT1G20450.1
AT1G20450.2
ERD10
Dehydrin family protein
arTal_v1_Chr1_-_7086873_7086873 1.62 AT1G20440.1
COR47
cold-regulated 47
arTal_v1_Chr1_+_209208_209208 1.58 AT1G01580.1
FRO2
ferric reduction oxidase 2
arTal_v1_Chr1_+_208995_208995 1.58 AT1G01580.2
FRO2
ferric reduction oxidase 2
arTal_v1_Chr1_-_17266724_17266824 1.55 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
arTal_v1_Chr1_+_17766738_17766738 1.55 AT1G48100.1
AT1G48100
Pectin lyase-like superfamily protein
arTal_v1_Chr1_-_3756998_3756998 1.54 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
arTal_v1_Chr2_+_6950041_6950041 1.54 AT2G15970.2
COR413-PM1
cold regulated 413 plasma membrane 1
arTal_v1_Chr2_+_6949851_6949851 1.54 AT2G15970.1
COR413-PM1
cold regulated 413 plasma membrane 1
arTal_v1_Chr1_+_23168767_23168767 1.41 AT1G62570.1
FMO GS-OX4
flavin-monooxygenase glucosinolate S-oxygenase 4
arTal_v1_Chr4_-_16285229_16285229 1.36 AT4G33980.1
AT4G33980
hypothetical protein
arTal_v1_Chr2_-_12343443_12343443 1.35 AT2G28780.1
AT2G28780
P-hydroxybenzoic acid efflux pump subunit
arTal_v1_Chr3_-_1652149_1652149 1.35 AT3G05660.1
RLP33
receptor like protein 33
arTal_v1_Chr1_+_16263805_16263805 1.33 AT1G43160.1
RAP2.6
related to AP2 6
arTal_v1_Chr4_-_16285059_16285059 1.33 AT4G33980.2
AT4G33980
hypothetical protein
arTal_v1_Chr5_-_23117403_23117686 1.31 AT5G57110.3
AT5G57110.1
AT5G57110.2
ACA8
autoinhibited Ca2+ -ATPase, isoform 8
arTal_v1_Chr1_+_25701770_25701770 1.30 AT1G68500.1
AT1G68500
hypothetical protein
arTal_v1_Chr1_-_4651549_4651549 1.24 AT1G13600.1
bZIP58
basic leucine-zipper 58
arTal_v1_Chr2_-_19370478_19370478 1.19 AT2G47180.1
GolS1
galactinol synthase 1
arTal_v1_Chr5_-_3728726_3728726 1.17 AT5G11590.1
TINY2
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_-_8358546_8358546 1.13 AT5G24470.1
PRR5
two-component response regulator-like protein
arTal_v1_Chr3_-_19139423_19139423 1.12 AT3G51600.1
LTP5
lipid transfer protein 5
arTal_v1_Chr4_-_13752103_13752103 1.12 AT4G27520.1
ENODL2
early nodulin-like protein 2
arTal_v1_Chr1_-_30142697_30142697 1.10 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_-_5645443_5645443 1.09 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
arTal_v1_Chr2_-_18821889_18821889 1.09 AT2G45680.1
TCP9
TCP family transcription factor
arTal_v1_Chr1_+_29356346_29356382 1.07 AT1G78070.2
AT1G78070.3
AT1G78070
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_+_29354944_29354944 1.07 AT1G78070.1
AT1G78070
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_+_24109538_24109538 1.06 AT1G64890.1
AT1G64890
Major facilitator superfamily protein
arTal_v1_Chr2_+_9592956_9592956 1.06 AT2G22590.1
AT2G22590
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr5_-_17022723_17022723 1.06 AT5G42570.1
AT5G42570
B-cell receptor-associated 31-like protein
arTal_v1_Chr4_+_10703348_10703348 1.06 AT4G19680.1
AT4G19680.2
IRT2
iron regulated transporter 2
arTal_v1_Chr4_+_10521259_10521379 1.05 AT4G19230.1
AT4G19230.2
CYP707A1
cytochrome P450, family 707, subfamily A, polypeptide 1
arTal_v1_Chr4_-_18206684_18206684 1.04 AT4G39070.1
BZS1
B-box zinc finger family protein
arTal_v1_Chr1_+_27628678_27628678 1.02 AT1G73480.1
AT1G73480
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_-_7550741_7550741 1.01 AT1G21540.1
AT1G21540
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr1_+_2848149_2848149 1.00 AT1G08890.1
AT1G08890
Major facilitator superfamily protein
arTal_v1_Chr5_-_25866972_25867025 1.00 AT5G64700.2
AT5G64700.1
UMAMIT21
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr3_+_16138375_16138375 0.99 AT3G44550.2
FAR5
fatty acid reductase 5
arTal_v1_Chr1_-_8189220_8189234 0.99 AT1G23090.4
AT1G23090.1
AT1G23090.3
AT1G23090.2
AST91
sulfate transporter 91
arTal_v1_Chr5_+_2563366_2563366 0.98 AT5G08000.1
AT5G08000.2
E13L3
glucan endo-1,3-beta-glucosidase-like protein 3
arTal_v1_Chr4_+_8804070_8804120 0.97 AT4G15393.2
AT4G15393.3
AT4G15393.1
CYP702A5
cytochrome P450, family 702, subfamily A, polypeptide 5
arTal_v1_Chr1_-_20578308_20578308 0.94 AT1G55152.1
AT1G55152
hypothetical protein
arTal_v1_Chr4_+_12317036_12317173 0.92 AT4G23630.1
AT4G23630.2
BTI1
VIRB2-interacting protein 1
arTal_v1_Chr3_+_16137576_16137576 0.92 AT3G44550.1
FAR5
fatty acid reductase 5
arTal_v1_Chr5_-_7820760_7820760 0.92 AT5G23220.1
NIC3
nicotinamidase 3
arTal_v1_Chr4_+_5244865_5244865 0.91 AT4G08300.1
UMAMIT17
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr2_+_7513128_7513130 0.89 AT2G17280.2
AT2G17280.1
AT2G17280
Phosphoglycerate mutase family protein
arTal_v1_Chr2_-_7757875_7757929 0.85 AT2G17840.2
AT2G17840.1
ERD7
Senescence/dehydration-associated protein-like protein
arTal_v1_Chr5_+_2167468_2167536 0.83 AT5G06980.4
AT5G06980.3
AT5G06980.5
AT5G06980.2
AT5G06980
hypothetical protein
arTal_v1_Chr2_+_18537177_18537177 0.81 AT2G44940.1
AT2G44940
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_-_7385833_7385833 0.80 AT5G22310.1
AT5G22310
trichohyalin-like protein
arTal_v1_Chr5_+_22967891_22967891 0.79 AT5G56790.1
AT5G56790
Protein kinase superfamily protein
arTal_v1_Chr1_-_9451768_9451768 0.78 AT1G27200.1
AT1G27200
glycosyltransferase family protein (DUF23)
arTal_v1_Chr4_-_15017365_15017365 0.77 AT4G30830.1
AT4G30830
myosin-like protein (Protein of unknown function, DUF593)
arTal_v1_Chr3_+_18672906_18672906 0.77 AT3G50350.1
AT3G50350
membrane insertase, putative (DUF1685)
arTal_v1_Chr5_+_4438200_4438200 0.77 AT5G13750.4
AT5G13750.3
ZIFL1
zinc induced facilitator-like 1
arTal_v1_Chr1_+_21136835_21136835 0.77 AT1G56430.1
NAS4
nicotianamine synthase 4
arTal_v1_Chr3_-_8807460_8807460 0.77 AT3G24300.1
AMT1%3B3
ammonium transporter 1;3
arTal_v1_Chr3_+_5008676_5008742 0.77 AT3G14890.1
AT3G14890.2
AT3G14890
phosphoesterase
arTal_v1_Chr1_-_12224000_12224108 0.76 AT1G33720.5
AT1G33720.1
AT1G33720.3
AT1G33720.2
AT1G33720.4
CYP76C6
cytochrome P450, family 76, subfamily C, polypeptide 6
arTal_v1_Chr3_+_1795145_1795145 0.76 AT3G05980.1
AT3G05980
hypothetical protein
arTal_v1_Chr2_-_13373862_13373862 0.76 AT2G31360.1
ADS2
16:0delta9 desaturase 2
arTal_v1_Chr5_+_2167120_2167120 0.76 AT5G06980.1
AT5G06980
hypothetical protein
arTal_v1_Chr2_-_13374018_13374018 0.75 AT2G31360.2
ADS2
16:0delta9 desaturase 2
arTal_v1_Chr3_+_20206128_20206241 0.75 AT3G54590.1
AT3G54590.2
AT3G54590.3
HRGP1
hydroxyproline-rich glycoprotein
arTal_v1_Chr1_-_29239484_29239484 0.75 AT1G77760.1
NIA1
nitrate reductase 1
arTal_v1_Chr1_+_18205934_18205934 0.74 AT1G49220.1
AT1G49220
RING/U-box superfamily protein
arTal_v1_Chr2_+_17057388_17057388 0.73 AT2G40880.1
CYSA
cystatin A
arTal_v1_Chr5_+_7328870_7328870 0.73 AT5G22100.1
AT5G22100
RNA cyclase family protein
arTal_v1_Chr2_-_18620451_18620451 0.72 AT2G45160.1
HAM1
GRAS family transcription factor
arTal_v1_Chr3_-_5638107_5638107 0.72 AT3G16560.2
AT3G16560
Protein phosphatase 2C family protein
arTal_v1_Chr5_+_4438645_4438645 0.71 AT5G13750.2
ZIFL1
zinc induced facilitator-like 1
arTal_v1_Chr3_-_5637870_5637870 0.70 AT3G16560.4
AT3G16560
Protein phosphatase 2C family protein
arTal_v1_Chr1_+_24551807_24551807 0.70 AT1G65960.3
AT1G65960.1
GAD2
glutamate decarboxylase 2
arTal_v1_Chr5_+_4437804_4437804 0.69 AT5G13750.1
ZIFL1
zinc induced facilitator-like 1
arTal_v1_Chr1_-_11595982_11596056 0.69 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_-_4496800_4496800 0.69 AT3G13720.1
PRA8
PRA1 (Prenylated rab acceptor) family protein
arTal_v1_Chr5_-_22680152_22680152 0.69 AT5G56000.1
Hsp81.4
HEAT SHOCK PROTEIN 81.4
arTal_v1_Chr5_-_22255663_22255663 0.69 AT5G54790.1
AT5G54790.2
AT5G54790
CTD small phosphatase-like protein
arTal_v1_Chr3_+_18672102_18672102 0.69 AT3G50350.2
AT3G50350
membrane insertase, putative (DUF1685)
arTal_v1_Chr3_-_5638576_5638576 0.68 AT3G16560.3
AT3G16560
Protein phosphatase 2C family protein
arTal_v1_Chr5_+_23883356_23883356 0.68 AT5G59180.1
NRPB7
DNA-directed RNA polymerase II
arTal_v1_Chr3_-_6212551_6212551 0.68 AT3G18130.1
RACK1C_AT
receptor for activated C kinase 1C
arTal_v1_Chr5_+_2132350_2132350 0.68 AT5G06860.1
PGIP1
polygalacturonase inhibiting protein 1
arTal_v1_Chr3_-_5638798_5638798 0.67 AT3G16560.1
AT3G16560
Protein phosphatase 2C family protein
arTal_v1_Chr4_-_11032677_11032754 0.67 AT4G20460.1
AT4G20470.1
AT4G20460
AT4G20470
NAD(P)-binding Rossmann-fold superfamily protein
transmembrane protein
arTal_v1_Chr4_-_15016977_15016977 0.67 AT4G30830.2
AT4G30830
myosin-like protein (Protein of unknown function, DUF593)
arTal_v1_Chr1_+_1529767_1529767 0.67 AT1G05260.1
RCI3
Peroxidase superfamily protein
arTal_v1_Chr1_-_4679594_4679594 0.66 AT1G13640.2
AT1G13640
Phosphatidylinositol 3- and 4-kinase family protein
arTal_v1_Chr5_-_2090430_2090430 0.66 AT5G06760.1
LEA4-5
Late Embryogenesis Abundant 4-5
arTal_v1_Chr1_+_18416474_18416475 0.66 AT1G49760.2
AT1G49760.1
PAB8
poly(A) binding protein 8
arTal_v1_Chr1_+_1520278_1520278 0.66 AT1G05240.1
AT1G05240
Peroxidase superfamily protein
arTal_v1_Chr1_-_4679862_4679862 0.66 AT1G13640.1
AT1G13640
Phosphatidylinositol 3- and 4-kinase family protein
arTal_v1_Chr2_-_19667192_19667192 0.66 AT2G48080.1
AT2G48080
oxidoreductase, 2OG-Fe(II) oxygenase family protein
arTal_v1_Chr5_-_15770456_15770456 0.65 AT5G39410.1
AT5G39410
Saccharopine dehydrogenase
arTal_v1_Chr2_-_12621231_12621231 0.65 AT2G29440.1
GSTU6
glutathione S-transferase tau 6
arTal_v1_Chr5_+_22515391_22515440 0.65 AT5G55580.1
AT5G55580.3
AT5G55580.2
AT5G55580
Mitochondrial transcription termination factor family protein
arTal_v1_Chr1_+_24552003_24552003 0.64 AT1G65960.2
GAD2
glutamate decarboxylase 2
arTal_v1_Chr4_-_7992429_7992429 0.64 AT4G13770.1
CYP83A1
cytochrome P450, family 83, subfamily A, polypeptide 1
arTal_v1_Chr3_+_4544364_4544384 0.63 AT3G13810.5
AT3G13810.3
AT3G13810.4
AT3G13810.6
AT3G13810.2
AT3G13810.1
IDD11
indeterminate(ID)-domain 11
arTal_v1_Chr5_-_6222811_6222811 0.63 AT5G18661.1
AT5G18661
transmembrane protein
arTal_v1_Chr1_-_23286797_23286797 0.63 AT1G62870.1
AT1G62870
hypothetical protein
arTal_v1_Chr4_+_12376122_12376194 0.63 AT4G23750.1
AT4G23750.2
CRF2
cytokinin response factor 2
arTal_v1_Chr1_+_23337167_23337167 0.62 AT1G62990.1
KNAT7
homeobox knotted-like protein
arTal_v1_Chr3_-_3961911_3961920 0.62 AT3G12490.1
AT3G12490.2
CYSB
cystatin B
arTal_v1_Chr5_+_25613096_25613096 0.62 AT5G63990.1
AT5G63990
Inositol monophosphatase family protein
arTal_v1_Chr4_-_16960170_16960170 0.62 AT4G35790.1
AT4G35790.3
PLDDELTA
phospholipase D delta
arTal_v1_Chr2_-_14568799_14568799 0.62 AT2G34585.1
AT2G34585
transmembrane protein
arTal_v1_Chr5_-_8659352_8659352 0.62 AT5G25110.1
CIPK25
CBL-interacting protein kinase 25
arTal_v1_Chr5_+_20436426_20436426 0.62 AT5G50200.1
WR3
nitrate transmembrane transporter
arTal_v1_Chr2_-_16804823_16804823 0.61 AT2G40230.1
AT2G40230
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_+_20436180_20436275 0.61 AT5G50200.3
AT5G50200.2
WR3
nitrate transmembrane transporter
arTal_v1_Chr1_+_18209194_18209194 0.61 AT1G49230.1
AT1G49230
RING/U-box superfamily protein
arTal_v1_Chr5_+_22525771_22525807 0.61 AT5G55610.1
AT5G55610.2
AT5G55610
isopentenyl-diphosphate delta-isomerase
arTal_v1_Chr3_-_3513379_3513379 0.60 AT3G11210.1
AT3G11210
SGNH hydrolase-type esterase superfamily protein
arTal_v1_Chr3_+_22630331_22630331 0.60 AT3G61150.1
HDG1
homeodomain GLABROUS 1
arTal_v1_Chr5_-_5243406_5243473 0.60 AT5G16040.2
AT5G16040.1
AT5G16040
Regulator of chromosome condensation (RCC1) family protein
arTal_v1_Chr1_+_24554413_24554413 0.59 AT1G65960.4
GAD2
glutamate decarboxylase 2
arTal_v1_Chr1_-_23487091_23487091 0.59 AT1G63310.1
AT1G63310
hypothetical protein
arTal_v1_Chr3_-_20903080_20903080 0.59 AT3G56370.1
AT3G56370
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr2_-_5675995_5675995 0.59 AT2G13610.1
ABCG5
ABC-2 type transporter family protein
arTal_v1_Chr4_-_16960407_16960407 0.59 AT4G35790.2
PLDDELTA
phospholipase D delta
arTal_v1_Chr5_+_16624157_16624157 0.58 AT5G41570.1
WRKY24
WRKY DNA-binding protein 24
arTal_v1_Chr1_+_116784_116784 0.58 AT1G01300.1
AT1G01300
Eukaryotic aspartyl protease family protein
arTal_v1_Chr1_+_218834_218834 0.58 AT1G01600.1
CYP86A4
cytochrome P450, family 86, subfamily A, polypeptide 4
arTal_v1_Chr5_+_8082650_8082744 0.58 AT5G23950.2
AT5G23950.1
AT5G23950
Calcium-dependent lipid-binding (CaLB domain) family protein
arTal_v1_Chr5_+_25613258_25613258 0.58 AT5G63990.2
AT5G63990
Inositol monophosphatase family protein
arTal_v1_Chr3_+_3285832_3285832 0.58 AT3G10530.1
AT3G10530
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_+_6688463_6688538 0.58 AT1G19350.4
AT1G19350.3
AT1G19350.5
BES1
Brassinosteroid signaling positive regulator (BZR1) family protein
arTal_v1_Chr4_-_17530589_17530589 0.58 AT4G37250.1
AT4G37250
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_-_24456115_24456115 0.57 AT5G60790.1
ABCF1
ABC transporter family protein
arTal_v1_Chr1_+_27778984_27778984 0.57 AT1G73870.1
BBX16
B-box type zinc finger protein with CCT domain-containing protein
arTal_v1_Chr5_-_7560190_7560190 0.57 AT5G22740.1
CSLA02
cellulose synthase-like A02
arTal_v1_Chr1_+_7610241_7610241 0.57 AT1G21670.1
AT1G21670
DPP6 amino-terminal domain protein
arTal_v1_Chr2_-_9866562_9866562 0.56 AT2G23170.1
GH3.3
Auxin-responsive GH3 family protein
arTal_v1_Chr1_-_19464434_19464434 0.55 AT1G52270.1
AT1G52270
hypothetical protein
arTal_v1_Chr1_+_5828915_5828915 0.55 AT1G17050.1
SPS2
solanesyl diphosphate synthase 2
arTal_v1_Chr5_+_16509507_16509507 0.55 AT5G41280.1
AT5G41280
Receptor-like protein kinase-related family protein
arTal_v1_Chr3_+_22720921_22720972 0.54 AT3G61410.2
AT3G61410.1
AT3G61410.3
AT3G61410
U-box kinase family protein
arTal_v1_Chr1_+_25746697_25746697 0.54 AT1G68570.1
AT1G68570
Major facilitator superfamily protein
arTal_v1_Chr5_-_20762461_20762461 0.54 AT5G51060.1
RHD2
NADPH/respiratory burst oxidase protein D
arTal_v1_Chr1_-_20971742_20971742 0.54 AT1G56070.1
AT1G56070.2
AT1G56070.3
LOS1
Ribosomal protein S5/Elongation factor G/III/V family protein
arTal_v1_Chr3_+_18249663_18249727 0.54 AT3G49220.2
AT3G49220.3
AT3G49220.1
AT3G49220
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr5_+_309374_309434 0.54 AT5G01810.1
AT5G01810.2
AT5G01810.3
CIPK15
CBL-interacting protein kinase 15
arTal_v1_Chr3_-_6704312_6704312 0.53 AT3G19340.1
AT3G19340
aminopeptidase (DUF3754)
arTal_v1_Chr4_-_16659486_16659486 0.53 AT4G34980.1
SLP2
subtilisin-like serine protease 2
arTal_v1_Chr3_-_2995694_2995694 0.53 AT3G09760.1
AT3G09760
RING/U-box superfamily protein
arTal_v1_Chr3_+_7595680_7595680 0.53 AT3G21560.1
UGT84A2
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr1_+_8049090_8049090 0.53 AT1G22740.1
RABG3B
RAB GTPase homolog G3B
arTal_v1_Chr4_-_8050157_8050157 0.53 AT4G13930.1
SHM4
serine hydroxymethyltransferase 4
arTal_v1_Chr4_-_347191_347293 0.53 AT4G00810.1
AT4G00810.2
AT4G00810
60S acidic ribosomal protein family
arTal_v1_Chr4_-_17561975_17561975 0.53 AT4G37320.1
CYP81D5
cytochrome P450, family 81, subfamily D, polypeptide 5
arTal_v1_Chr2_-_19650287_19650313 0.53 AT2G48030.1
AT2G48030.2
AT2G48030
DNAse I-like superfamily protein
arTal_v1_Chr1_+_18932766_18932766 0.52 AT1G51090.1
AT1G51090
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr4_-_304508_304612 0.52 AT4G00730.2
AT4G00730.1
ANL2
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
arTal_v1_Chr1_-_28009450_28009451 0.52 AT1G74520.2
AT1G74520.1
HVA22A
HVA22 homologue A
arTal_v1_Chr1_-_22382422_22382422 0.52 AT1G60790.1
TBL2
trichome birefringence-like protein (DUF828)
arTal_v1_Chr5_-_7040654_7040654 0.52 AT5G20790.2
AT5G20790
transmembrane protein
arTal_v1_Chr1_-_105330_105330 0.52 AT1G01250.1
AT1G01250
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr3_-_21156075_21156075 0.52 AT3G57150.1
NAP57
homologue of NAP57
arTal_v1_Chr2_+_10431260_10431260 0.52 AT2G24560.1
AT2G24560
GDSL-like Lipase/Acylhydrolase family protein
arTal_v1_Chr5_-_4915976_4915976 0.52 AT5G15150.1
HB-3
homeobox 3
arTal_v1_Chr1_+_25746994_25746994 0.51 AT1G68570.2
AT1G68570
Major facilitator superfamily protein
arTal_v1_Chr3_-_18039879_18039879 0.51 AT3G48700.1
CXE13
carboxyesterase 13
arTal_v1_Chr5_-_4560137_4560137 0.51 AT5G14130.1
AT5G14130
Peroxidase superfamily protein
arTal_v1_Chr5_-_8987898_8987898 0.51 AT5G25810.1
tny
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_-_23226983_23226983 0.51 AT1G62710.1
BETA-VPE
beta vacuolar processing enzyme
arTal_v1_Chr1_+_6688698_6688703 0.51 AT1G19350.1
AT1G19350.6
BES1
Brassinosteroid signaling positive regulator (BZR1) family protein
arTal_v1_Chr5_+_23098872_23098872 0.50 AT5G57080.1
AT5G57080
transmembrane protein
arTal_v1_Chr5_-_23981567_23981631 0.50 AT5G59480.2
AT5G59480.1
AT5G59480.4
AT5G59480.3
AT5G59480
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr1_+_1889362_1889362 0.50 AT1G06180.1
MYB13
myb domain protein 13
arTal_v1_Chr3_+_51496_51542 0.50 AT3G01150.1
AT3G01150.3
AT3G01150.2
AT3G01150.4
PTB1
polypyrimidine tract-binding protein 1
arTal_v1_Chr5_-_19328940_19328986 0.50 AT5G47700.2
AT5G47700.1
AT5G47700
60S acidic ribosomal protein family
arTal_v1_Chr2_-_6668046_6668046 0.49 AT2G15320.1
AT2G15320
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr4_+_12660687_12660687 0.49 AT4G24510.1
CER2
HXXXD-type acyl-transferase family protein
arTal_v1_Chr1_+_27365772_27365787 0.49 AT1G72700.1
AT1G72700.2
AT1G72700
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
arTal_v1_Chr5_+_18042935_18042971 0.48 AT5G44720.1
AT5G44720.2
AT5G44720
Molybdenum cofactor sulfurase family protein
arTal_v1_Chr5_-_17591737_17591737 0.48 AT5G43780.1
APS4
Pseudouridine synthase/archaeosine transglycosylase-like family protein
arTal_v1_Chr5_+_206432_206432 0.48 AT5G01520.2
AT5G01520.1
AIRP2
RING/U-box superfamily protein
arTal_v1_Chr5_-_4560315_4560315 0.48 AT5G14130.2
AT5G14130
Peroxidase superfamily protein
arTal_v1_Chr5_-_740319_740319 0.48 AT5G03140.1
AT5G03140
Concanavalin A-like lectin protein kinase family protein
arTal_v1_Chr1_-_17706460_17706460 0.48 AT1G48000.1
MYB112
myb domain protein 112

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G12610

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 5.3 GO:0072708 response to sorbitol(GO:0072708)
0.8 3.1 GO:0030417 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.4 1.6 GO:0010507 negative regulation of autophagy(GO:0010507)
0.3 0.9 GO:0010792 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.3 1.5 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.3 8.6 GO:0006012 galactose metabolic process(GO:0006012)
0.2 3.2 GO:0009608 response to symbiont(GO:0009608)
0.2 0.7 GO:1900151 positive regulation of mRNA processing(GO:0050685) regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) positive regulation of mRNA catabolic process(GO:0061014) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.2 12.8 GO:0009631 cold acclimation(GO:0009631)
0.2 0.7 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.2 0.7 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.2 1.0 GO:1900458 negative regulation of brassinosteroid mediated signaling pathway(GO:1900458)
0.2 0.5 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.2 0.5 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.2 0.6 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.2 0.9 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.2 2.5 GO:0006538 glutamate catabolic process(GO:0006538)
0.2 0.6 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.1 0.4 GO:1901031 regulation of oxidoreductase activity(GO:0051341) regulation of response to reactive oxygen species(GO:1901031)
0.1 0.9 GO:1904961 quiescent center organization(GO:1904961)
0.1 0.4 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.1 2.1 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.1 0.8 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.1 0.6 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 2.2 GO:0010540 basipetal auxin transport(GO:0010540)
0.1 0.4 GO:0042539 hypotonic salinity response(GO:0042539)
0.1 0.3 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.1 0.5 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.1 0.3 GO:0080171 lytic vacuole organization(GO:0080171)
0.1 0.3 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.1 0.5 GO:0043478 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 0.8 GO:0046473 phosphatidic acid metabolic process(GO:0046473)
0.1 0.3 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.1 0.3 GO:0015755 hexose transport(GO:0008645) fructose transport(GO:0015755)
0.1 0.7 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.1 0.3 GO:0010433 nectary development(GO:0010254) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.1 0.5 GO:1901562 response to paraquat(GO:1901562)
0.1 0.3 GO:0051204 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.1 1.1 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.1 0.9 GO:0046083 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.1 0.4 GO:0051938 L-amino acid import(GO:0043092) L-glutamate import(GO:0051938) L-alpha-amino acid transmembrane transport(GO:1902475)
0.1 0.7 GO:0033523 histone H2B ubiquitination(GO:0033523)
0.1 0.5 GO:0046683 response to organophosphorus(GO:0046683)
0.1 0.3 GO:0042353 fucose biosynthetic process(GO:0042353)
0.1 3.4 GO:0055072 iron ion homeostasis(GO:0055072)
0.1 1.7 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 0.3 GO:0009945 radial axis specification(GO:0009945)
0.1 0.5 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 1.9 GO:0000103 sulfate assimilation(GO:0000103)
0.1 0.3 GO:0019695 choline metabolic process(GO:0019695)
0.1 0.3 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.1 0.5 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.1 0.2 GO:0032261 purine nucleotide salvage(GO:0032261) purine-containing compound salvage(GO:0043101)
0.1 0.5 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.1 0.5 GO:1904482 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.1 0.3 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.1 0.2 GO:0019482 thymine catabolic process(GO:0006210) uracil catabolic process(GO:0006212) beta-alanine metabolic process(GO:0019482) beta-alanine biosynthetic process(GO:0019483) thymine metabolic process(GO:0019859)
0.1 0.2 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.3 GO:0006023 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.1 0.6 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.1 0.9 GO:0006826 iron ion transport(GO:0006826)
0.1 1.9 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 0.4 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 0.3 GO:0006409 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.1 0.3 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 0.2 GO:0060919 auxin influx(GO:0060919)
0.1 0.9 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.8 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.1 0.4 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.1 0.2 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.1 0.7 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.1 0.2 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.1 0.3 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.3 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.1 0.1 GO:0048729 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.2 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.1 0.2 GO:1903173 phytol metabolic process(GO:0033306) fatty alcohol metabolic process(GO:1903173)
0.1 0.3 GO:1903428 positive regulation of reactive oxygen species biosynthetic process(GO:1903428)
0.1 0.6 GO:0071051 polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.1 0.2 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.1 1.0 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.1 0.4 GO:0010315 auxin efflux(GO:0010315)
0.1 0.4 GO:2000601 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.0 0.0 GO:0070813 hydrogen sulfide metabolic process(GO:0070813)
0.0 0.6 GO:1902074 response to salt(GO:1902074)
0.0 1.3 GO:0006730 one-carbon metabolic process(GO:0006730)
0.0 0.5 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.0 0.5 GO:0006206 pyrimidine nucleobase metabolic process(GO:0006206)
0.0 0.9 GO:0050821 protein stabilization(GO:0050821)
0.0 0.2 GO:0072698 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.0 0.8 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.0 0.2 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.0 0.3 GO:0045899 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.0 0.1 GO:0072530 GDP-mannose transport(GO:0015784) purine-containing compound transmembrane transport(GO:0072530) purine nucleotide-sugar transmembrane transport(GO:0090480) GDP-mannose transmembrane transport(GO:1990570)
0.0 2.7 GO:0006972 hyperosmotic response(GO:0006972)
0.0 0.7 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.0 0.9 GO:0010252 auxin homeostasis(GO:0010252)
0.0 1.8 GO:0019761 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.0 0.3 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.0 0.3 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.0 0.8 GO:0009593 detection of chemical stimulus(GO:0009593)
0.0 1.0 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.3 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.4 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.0 0.3 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0 0.2 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.2 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.0 0.2 GO:0009819 drought recovery(GO:0009819)
0.0 1.3 GO:0051170 nuclear import(GO:0051170)
0.0 0.1 GO:0046085 adenosine metabolic process(GO:0046085)
0.0 0.2 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.1 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.0 0.1 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.3 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.0 0.1 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.0 0.4 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.0 0.6 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.3 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.0 0.4 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.7 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 1.1 GO:0048767 root hair elongation(GO:0048767)
0.0 0.1 GO:0070537 histone H2A K63-linked deubiquitination(GO:0070537)
0.0 0.1 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.0 0.1 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.0 0.1 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 0.3 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.1 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.1 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.0 0.1 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.0 0.7 GO:0010091 trichome branching(GO:0010091)
0.0 1.2 GO:0009247 glycolipid biosynthetic process(GO:0009247)
0.0 0.3 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 0.3 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.2 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.3 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.0 0.4 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.1 GO:0010338 leaf formation(GO:0010338)
0.0 0.6 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.5 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.0 0.1 GO:0006183 GTP biosynthetic process(GO:0006183)
0.0 0.2 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.0 0.2 GO:0051553 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.0 0.6 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.1 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)
0.0 0.2 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.0 0.8 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 6.8 GO:0006970 response to osmotic stress(GO:0006970)
0.0 0.8 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 0.1 GO:0034765 regulation of transmembrane transport(GO:0034762) regulation of ion transmembrane transport(GO:0034765)
0.0 0.1 GO:0046864 isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865)
0.0 0.2 GO:0032544 plastid translation(GO:0032544)
0.0 0.1 GO:0070193 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.0 0.2 GO:0009641 shade avoidance(GO:0009641)
0.0 0.2 GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.0 0.3 GO:0009638 phototropism(GO:0009638)
0.0 1.8 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 0.0 GO:0071963 establishment or maintenance of cell polarity regulating cell shape(GO:0071963) regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000769)
0.0 0.3 GO:0045927 positive regulation of growth(GO:0045927)
0.0 0.1 GO:0080183 response to photooxidative stress(GO:0080183)
0.0 0.2 GO:0010229 inflorescence development(GO:0010229)
0.0 0.3 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.3 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.1 GO:0042149 cellular response to glucose starvation(GO:0042149)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.9 GO:0031357 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.2 1.2 GO:0090395 plant cell papilla(GO:0090395)
0.1 1.5 GO:0071782 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.1 0.6 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.1 0.3 GO:0034457 Mpp10 complex(GO:0034457)
0.1 0.3 GO:0005775 vacuolar lumen(GO:0005775)
0.1 0.5 GO:0031429 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.1 0.3 GO:0043614 eukaryotic 48S preinitiation complex(GO:0033290) multi-eIF complex(GO:0043614)
0.1 0.2 GO:1990112 RQC complex(GO:1990112)
0.1 0.3 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.1 0.2 GO:0031932 TORC2 complex(GO:0031932)
0.1 0.5 GO:0035861 site of double-strand break(GO:0035861)
0.0 0.2 GO:0030681 nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.0 0.5 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.2 GO:1990752 cellulose synthase complex(GO:0010330) microtubule end(GO:1990752)
0.0 0.7 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 0.5 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.4 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.3 GO:0005677 chromatin silencing complex(GO:0005677)
0.0 0.6 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 0.4 GO:0031209 SCAR complex(GO:0031209)
0.0 0.6 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.1 GO:0000178 exosome (RNase complex)(GO:0000178)
0.0 0.1 GO:0009509 chromoplast(GO:0009509)
0.0 0.7 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.0 0.3 GO:0016272 prefoldin complex(GO:0016272)
0.0 1.7 GO:0009527 plastid outer membrane(GO:0009527)
0.0 0.4 GO:0044450 microtubule organizing center part(GO:0044450)
0.0 0.1 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 2.7 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 2.1 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.3 GO:0030119 AP-type membrane coat adaptor complex(GO:0030119)
0.0 20.8 GO:0009506 cell-cell junction(GO:0005911) plasmodesma(GO:0009506) cell junction(GO:0030054) symplast(GO:0055044)
0.0 0.2 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.0 0.3 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.0 0.4 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.3 GO:0030686 90S preribosome(GO:0030686)
0.0 0.4 GO:0009504 cell plate(GO:0009504)
0.0 0.3 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 0.1 GO:0098852 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 0.2 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.2 GO:0005769 early endosome(GO:0005769)
0.0 0.1 GO:0070552 BRISC complex(GO:0070552)
0.0 0.1 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.0 0.8 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.1 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.0 0.3 GO:0005686 U2 snRNP(GO:0005686)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 7.0 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.8 3.1 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.4 1.4 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.3 1.9 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.3 5.3 GO:0016157 sucrose synthase activity(GO:0016157)
0.3 0.9 GO:0000403 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.3 3.1 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.3 1.9 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.3 2.7 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.3 0.8 GO:0008936 nicotinamidase activity(GO:0008936)
0.2 0.7 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.2 1.5 GO:0016312 inositol bisphosphate phosphatase activity(GO:0016312)
0.2 0.7 GO:0035591 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.2 0.5 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.2 1.6 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.2 0.5 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.2 1.4 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 0.4 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1 0.4 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.1 0.7 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.6 GO:0050347 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.1 0.5 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.1 1.6 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.1 2.8 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.1 0.8 GO:0030544 Hsp70 protein binding(GO:0030544)
0.1 0.4 GO:0015180 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
0.1 0.5 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 1.6 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.1 0.8 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.1 0.3 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.1 0.5 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.5 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.1 0.3 GO:0019779 Atg8 ligase activity(GO:0019776) Atg8 activating enzyme activity(GO:0019779)
0.1 0.3 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 0.3 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.1 0.5 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.1 0.8 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.3 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.1 3.1 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.1 0.4 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 0.7 GO:0043995 histone acetyltransferase activity (H4-K5 specific)(GO:0043995)
0.1 0.4 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.1 0.3 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.1 0.5 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.3 GO:0005353 fructose transmembrane transporter activity(GO:0005353)
0.1 0.5 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.2 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.1 0.4 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.3 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.1 1.4 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 1.2 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.1 0.3 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.1 0.3 GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity(GO:0035242)
0.1 1.0 GO:0031369 translation initiation factor binding(GO:0031369)
0.1 1.5 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.1 0.4 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.1 0.3 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 0.3 GO:0000150 recombinase activity(GO:0000150)
0.1 0.2 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.1 0.4 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.1 0.3 GO:0017091 AU-rich element binding(GO:0017091)
0.1 0.3 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.1 0.2 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.1 0.2 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.4 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.7 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.1 0.4 GO:0071933 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.0 0.2 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.0 0.6 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.0 0.2 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.2 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 0.1 GO:0016504 peptidase activator activity(GO:0016504)
0.0 0.3 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.3 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 0.4 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.1 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)
0.0 0.8 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.9 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.3 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 0.3 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.0 0.5 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.5 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.3 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.1 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.0 0.5 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.1 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.0 0.6 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.0 0.2 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.0 0.8 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.3 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.2 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.2 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.0 0.4 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 0.3 GO:0031078 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.6 GO:0043424 protein histidine kinase binding(GO:0043424)
0.0 0.1 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328) auxin transmembrane transporter activity(GO:0080161)
0.0 0.4 GO:0016408 C-acyltransferase activity(GO:0016408)
0.0 0.5 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.1 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.0 0.9 GO:0051087 chaperone binding(GO:0051087)
0.0 0.1 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.0 0.3 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.2 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.1 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.5 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.2 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.0 0.4 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.1 GO:0022829 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.0 0.2 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.2 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.3 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.3 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.2 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.0 0.1 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.3 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.1 GO:0004049 anthranilate synthase activity(GO:0004049)
0.0 0.2 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 0.9 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 3.6 GO:0042803 protein homodimerization activity(GO:0042803)
0.0 0.1 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.0 0.7 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.0 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.0 0.1 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.0 0.2 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.0 0.3 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.3 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.2 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.3 GO:0008378 galactosyltransferase activity(GO:0008378)
0.0 0.1 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.0 0.7 GO:0016879 ligase activity, forming carbon-nitrogen bonds(GO:0016879)
0.0 0.2 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.8 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.1 GO:0080025 phosphatidylinositol-3-phosphate binding(GO:0032266) phosphatidylinositol-3,5-bisphosphate binding(GO:0080025)
0.0 0.1 GO:0004470 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471) malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.0 0.2 GO:0070628 proteasome binding(GO:0070628)
0.0 0.1 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.0 0.3 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 0.0 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.0 2.0 GO:0001159 core promoter proximal region sequence-specific DNA binding(GO:0000987) core promoter proximal region DNA binding(GO:0001159)
0.0 0.4 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 0.3 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.6 GO:0005319 lipid transporter activity(GO:0005319)
0.0 0.5 GO:0030145 manganese ion binding(GO:0030145)
0.0 1.4 GO:0003779 actin binding(GO:0003779)
0.0 0.1 GO:0061608 nuclear localization sequence binding(GO:0008139) nuclear import signal receptor activity(GO:0061608)
0.0 0.5 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.2 GO:0004311 farnesyltranstransferase activity(GO:0004311)
0.0 0.1 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 0.1 GO:0035198 miRNA binding(GO:0035198)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.1 PID MTOR 4PATHWAY mTOR signaling pathway
0.1 0.2 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.2 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.0 0.5 PID ATR PATHWAY ATR signaling pathway
0.0 0.1 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.9 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.1 0.9 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.1 0.5 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.1 0.2 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.5 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.0 0.3 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production