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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G15780

Z-value: 0.11

Transcription factors associated with AT1G15780

Gene Symbol Gene ID Gene Info
AT1G15780
AT1G15780 mediator of RNA polymerase II transcription subunit 15a-like protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NRB4arTal_v1_Chr1_-_5436352_5436352-0.901.3e-05Click!

Activity profile of AT1G15780 motif

Sorted Z-values of AT1G15780 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_+_5038563_5038563 0.18 AT5G15530.1
BCCP2
biotin carboxyl carrier protein 2
arTal_v1_Chr5_-_19947588_19947588 0.05 AT5G49190.1
SUS2
sucrose synthase 2
arTal_v1_Chr5_-_18776735_18776839 0.05 AT5G46290.2
AT5G46290.3
AT5G46290.1
KASI
3-ketoacyl-acyl carrier protein synthase I
arTal_v1_Chr5_-_19947013_19947101 0.04 AT5G49190.3
AT5G49190.2
SUS2
sucrose synthase 2
arTal_v1_Chr1_+_23192146_23192146 0.04 AT1G62640.2
AT1G62640.1
KAS III
3-ketoacyl-acyl carrier protein synthase III
arTal_v1_Chr3_+_20114684_20114684 0.02 AT3G54320.1
WRI1
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr3_-_3863250_3863250 0.02 AT3G12120.1
FAD2
fatty acid desaturase 2
arTal_v1_Chr3_-_3862498_3862498 0.01 AT3G12120.2
FAD2
fatty acid desaturase 2
arTal_v1_Chr3_+_20114488_20114488 0.01 AT3G54320.4
AT3G54320.3
WRI1
Integrase-type DNA-binding superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G15780

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0009374 biotin binding(GO:0009374)
0.0 0.1 GO:0030620 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)