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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G19350

Z-value: 0.16

Transcription factors associated with AT1G19350

Gene Symbol Gene ID Gene Info
AT1G19350
AT1G19350 Brassinosteroid signaling positive regulator (BZR1) family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
BES1arTal_v1_Chr1_+_6688463_6688538-0.621.7e-02Click!

Activity profile of AT1G19350 motif

Sorted Z-values of AT1G19350 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr4_-_10316886_10316886 0.12 AT4G18780.1
IRX1
cellulose synthase family protein
arTal_v1_Chr5_+_17714390_17714390 0.08 AT5G44030.2
AT5G44030.1
CESA4
cellulose synthase A4
arTal_v1_Chr4_+_18296388_18296388 0.08 AT4G39350.1
CESA2
cellulose synthase A2
arTal_v1_Chr5_-_1535558_1535558 0.06 AT5G05170.1
CEV1
Cellulose synthase family protein
arTal_v1_Chr2_+_9284391_9284391 0.06 AT2G21770.1
CESA9
cellulose synthase A9
arTal_v1_Chr5_+_17715687_17715687 0.06 AT5G44030.3
CESA4
cellulose synthase A4
arTal_v1_Chr5_+_25881033_25881033 0.05 AT5G64740.1
CESA6
cellulose synthase 6
arTal_v1_Chr4_-_15646844_15646844 0.03 AT4G32410.1
CESA1
cellulose synthase 1
arTal_v1_Chr5_+_3072870_3072870 0.03 AT5G09870.1
CESA5
cellulose synthase 5
arTal_v1_Chr2_-_10872243_10872243 0.02 AT2G25540.1
CESA10
cellulose synthase A catalytic subunit 3 UDP-forming-like protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G19350

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.0 0.5 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.0 GO:0010330 cellulose synthase complex(GO:0010330)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)