GSE130291:vernalization in Arabidopsis thaliana

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
AT1G21910 Links TAIR	AT1G21910	Integrase-type DNA-binding superfamily protein

Gene	Promoter	Pearson corr. coef.	P-value	Plot
DREB26	arTal_v1_Chr1_+_7696427_7696427	-0.50	7.2e-02	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr5_-_5741500_5741500 Show fit	0.14	AT5G17420.1	IRX3 Links TAIR Show fit	Cellulose synthase family protein
arTal_v1_Chr5_+_5084524_5084695 Show fit	0.09	AT5G15630.1 AT5G15630.2 AT5G15630.3 AT5G15630.4 AT5G15630.5	IRX6 Links TAIR Show fit	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
arTal_v1_Chr2_-_12996012_12996012 Show fit	0.07	AT2G30490.1	C4H Links TAIR Show fit	cinnamate-4-hydroxylase
arTal_v1_Chr3_-_6421983_6422141 Show fit	0.07	AT3G18660.1 AT3G18660.3 AT3G18660.2	PGSIP1 Links TAIR Show fit	plant glycogenin-like starch initiation protein 1
arTal_v1_Chr5_+_24396981_24396981 Show fit	0.01	AT5G60690.1	REV Links TAIR Show fit	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0010395	rhamnogalacturonan I metabolic process(GO:0010395)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0010330	cellulose synthase complex(GO:0010330)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0080116	glucuronoxylan glucuronosyltransferase activity(GO:0080116)