Project

GSE130291:vernalization in Arabidopsis thaliana

Navigation
Downloads

Results for AT1G28300

Z-value: 0.48

Transcription factors associated with AT1G28300

Gene Symbol Gene ID Gene Info
AT1G28300
AT1G28300 AP2/B3-like transcriptional factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
LEC2arTal_v1_Chr1_-_9899876_98998760.224.5e-01Click!

Activity profile of AT1G28300 motif

Sorted Z-values of AT1G28300 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr3_+_20354351_20354351 1.42 AT3G54940.3
AT3G54940.2
AT3G54940
Papain family cysteine protease
arTal_v1_Chr3_-_222827_222827 0.70 AT3G01570.1
AT3G01570
Oleosin family protein
arTal_v1_Chr5_-_17758275_17758336 0.68 AT5G44120.2
AT5G44120.1
AT5G44120.3
CRA1
RmlC-like cupins superfamily protein
arTal_v1_Chr1_+_25053673_25053673 0.56 AT1G67100.1
LBD40
LOB domain-containing protein 40
arTal_v1_Chr4_+_13611796_13611796 0.53 AT4G27160.1
SESA3
seed storage albumin 3
arTal_v1_Chr5_-_22239187_22239187 0.52 AT5G54740.1
SESA5
seed storage albumin 5
arTal_v1_Chr4_+_12900430_12900430 0.46 AT4G25140.1
OLEO1
oleosin 1
arTal_v1_Chr1_-_24183199_24183300 0.45 AT1G65090.2
AT1G65090.1
AT1G65090.3
AT1G65090
nucleolin
arTal_v1_Chr4_+_13607329_13607329 0.44 AT4G27140.1
SESA1
seed storage albumin 1
arTal_v1_Chr5_-_20591937_20591937 0.39 AT5G50600.1
HSD1
hydroxysteroid dehydrogenase 1
arTal_v1_Chr2_+_17130774_17130821 0.33 AT2G41070.5
AT2G41070.2
AT2G41070.1
AT2G41070.3
EEL
Basic-leucine zipper (bZIP) transcription factor family protein
arTal_v1_Chr4_+_13613596_13613596 0.29 AT4G27170.1
SESA4
seed storage albumin 4
arTal_v1_Chr2_+_17129753_17129753 0.27 AT2G41070.4
EEL
Basic-leucine zipper (bZIP) transcription factor family protein
arTal_v1_Chr5_-_4450864_4450958 0.25 AT5G13790.1
AT5G13790.2
AGL15
AGAMOUS-like 15
arTal_v1_Chr4_+_13609341_13609341 0.14 AT4G27150.1
SESA2
seed storage albumin 2
arTal_v1_Chr3_+_22995686_22995777 0.02 AT3G62100.1
AT3G62100.2
IAA30
indole-3-acetic acid inducible 30

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G28300

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.1 0.3 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862) negative regulation of seed maturation(GO:2000692)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.2 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 1.4 GO:0005764 lysosome(GO:0005764)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.0 0.5 GO:0043424 protein histidine kinase binding(GO:0043424)
0.0 1.4 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.7 GO:0045735 nutrient reservoir activity(GO:0045735)