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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G28370

Z-value: 0.82

Transcription factors associated with AT1G28370

Gene Symbol Gene ID Gene Info
AT1G28370
AT1G28370 ERF domain protein 11

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ERF11arTal_v1_Chr1_-_9956960_9956980-0.362.1e-01Click!

Activity profile of AT1G28370 motif

Sorted Z-values of AT1G28370 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr2_-_17712290_17712330 2.60 AT2G42540.2
AT2G42540.4
AT2G42540.1
AT2G42540.3
COR15A
cold-regulated 15a
arTal_v1_Chr5_+_21240717_21240717 1.95 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
arTal_v1_Chr4_-_15954803_15954803 1.66 AT4G33070.1
AT4G33070
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
arTal_v1_Chr1_-_5765798_5765798 1.55 AT1G16850.1
AT1G16850
transmembrane protein
arTal_v1_Chr3_+_20612693_20612693 1.46 AT3G55580.1
AT3G55580
Regulator of chromosome condensation (RCC1) family protein
arTal_v1_Chr1_+_4662698_4662752 1.40 AT1G13609.1
AT1G13609.2
AT1G13609
Defensin-like (DEFL) family protein
arTal_v1_Chr2_+_15106940_15106940 1.30 AT2G35960.1
NHL12
NDR1/HIN1-like 12
arTal_v1_Chr3_+_22935510_22935510 1.28 AT3G61930.1
AT3G61930
hypothetical protein
arTal_v1_Chr3_-_20576249_20576249 1.27 AT3G55500.1
EXPA16
expansin A16
arTal_v1_Chr2_+_19245591_19245684 1.23 AT2G46830.1
AT2G46830.2
CCA1
circadian clock associated 1
arTal_v1_Chr3_+_6023844_6023929 1.16 AT3G17609.2
AT3G17609.3
AT3G17609.4
AT3G17609.1
HYH
HY5-homolog
arTal_v1_Chr2_+_19246681_19246681 1.15 AT2G46830.3
CCA1
circadian clock associated 1
arTal_v1_Chr1_-_3756998_3756998 1.10 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
arTal_v1_Chr5_+_22388782_22388782 1.07 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr4_+_9028262_9028262 1.07 AT4G15910.1
DI21
drought-induced 21
arTal_v1_Chr5_+_22388521_22388521 1.05 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr1_-_10164452_10164452 1.05 AT1G29090.1
AT1G29090
Cysteine proteinases superfamily protein
arTal_v1_Chr5_+_4768263_4768263 1.04 AT5G14760.1
AO
L-aspartate oxidase
arTal_v1_Chr2_-_12343443_12343443 1.01 AT2G28780.1
AT2G28780
P-hydroxybenzoic acid efflux pump subunit
arTal_v1_Chr2_-_19370478_19370478 1.01 AT2G47180.1
GolS1
galactinol synthase 1
arTal_v1_Chr1_+_28498821_28498821 1.00 AT1G75900.1
AT1G75900
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr1_+_16263805_16263805 0.99 AT1G43160.1
RAP2.6
related to AP2 6
arTal_v1_Chr3_-_23195917_23195917 0.97 AT3G62700.1
ABCC14
multidrug resistance-associated protein 10
arTal_v1_Chr1_+_22198266_22198266 0.96 AT1G60190.1
PUB19
ARM repeat superfamily protein
arTal_v1_Chr3_-_20816035_20816035 0.95 AT3G56090.1
FER3
ferritin 3
arTal_v1_Chr1_+_17766738_17766738 0.94 AT1G48100.1
AT1G48100
Pectin lyase-like superfamily protein
arTal_v1_Chr3_+_17268700_17268700 0.93 AT3G46900.1
COPT2
copper transporter 2
arTal_v1_Chr1_-_17266724_17266824 0.92 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
arTal_v1_Chr1_-_507268_507268 0.92 AT1G02460.1
AT1G02460
Pectin lyase-like superfamily protein
arTal_v1_Chr2_+_9126263_9126263 0.90 AT2G21320.1
BBX18
B-box zinc finger family protein
arTal_v1_Chr3_-_20629295_20629295 0.90 AT3G55610.1
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
arTal_v1_Chr2_-_13392927_13392927 0.87 AT2G31410.1
AT2G31410
coiled-coil protein
arTal_v1_Chr3_-_20629093_20629093 0.86 AT3G55610.2
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
arTal_v1_Chr1_-_27755297_27755297 0.86 AT1G73810.1
AT1G73810
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
arTal_v1_Chr4_-_9779939_9779939 0.85 AT4G17550.1
G3Pp4
Major facilitator superfamily protein
arTal_v1_Chr1_+_28829243_28829243 0.85 AT1G76800.1
AT1G76800
Vacuolar iron transporter (VIT) family protein
arTal_v1_Chr3_-_5845220_5845220 0.84 AT3G17130.1
AT3G17130
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr3_+_17457614_17457614 0.84 AT3G47380.1
AT3G47380
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr1_-_10664570_10664668 0.84 AT1G30280.2
AT1G30280.3
AT1G30280.1
AT1G30280
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr4_+_17639_17784 0.84 AT4G00050.1
AT4G00050.3
AT4G00050.2
UNE10
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr2_+_13987669_13987669 0.84 AT2G32960.1
PFA-DSP2
Phosphotyrosine protein phosphatases superfamily protein
arTal_v1_Chr3_-_19747114_19747114 0.83 AT3G53260.1
PAL2
phenylalanine ammonia-lyase 2
arTal_v1_Chr4_-_9844290_9844334 0.83 AT4G17680.3
AT4G17680.2
AT4G17680.1
AT4G17680
SBP (S-ribonuclease binding protein) family protein
arTal_v1_Chr5_+_25756272_25756272 0.82 AT5G64420.1
AT5G64420
DNA polymerase V family
arTal_v1_Chr5_+_18537239_18537239 0.81 AT5G45700.1
AT5G45700
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr1_+_23740493_23740562 0.80 AT1G63980.1
AT1G63980.2
AT1G63980
D111/G-patch domain-containing protein
arTal_v1_Chr1_+_7404328_7404328 0.79 AT1G21140.1
AT1G21140
Vacuolar iron transporter (VIT) family protein
arTal_v1_Chr3_+_8172479_8172479 0.78 AT3G23000.1
CIPK7
CBL-interacting protein kinase 7
arTal_v1_Chr4_-_810574_810611 0.77 AT4G01870.1
AT4G01870.2
AT4G01870
tolB protein-like protein
arTal_v1_Chr3_-_565801_565801 0.77 AT3G02640.1
AT3G02640
transmembrane protein
arTal_v1_Chr4_-_433938_434029 0.76 AT4G01000.2
AT4G01000.1
AT4G01000
Ubiquitin-like superfamily protein
arTal_v1_Chr4_+_596397_596399 0.76 AT4G01440.3
AT4G01440.2
AT4G01440.1
AT4G01440.4
UMAMIT31
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr3_-_10790553_10790553 0.76 AT3G28740.1
CYP81D11
Cytochrome P450 superfamily protein
arTal_v1_Chr3_+_7959753_7959753 0.76 AT3G22440.1
AT3G22440
FRIGIDA-like protein
arTal_v1_Chr1_+_18035967_18035967 0.75 AT1G48750.1
AT1G48750
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr1_-_29239484_29239484 0.74 AT1G77760.1
NIA1
nitrate reductase 1
arTal_v1_Chr1_+_13225168_13225168 0.73 AT1G35720.1
ANNAT1
annexin 1
arTal_v1_Chr2_+_9841842_9841842 0.72 AT2G23120.1
AT2G23120
Late embryogenesis abundant protein, group 6
arTal_v1_Chr1_+_25701770_25701770 0.72 AT1G68500.1
AT1G68500
hypothetical protein
arTal_v1_Chr5_-_7385833_7385833 0.72 AT5G22310.1
AT5G22310
trichohyalin-like protein
arTal_v1_Chr3_-_6564424_6564424 0.72 AT3G19030.1
AT3G19030
transcription initiation factor TFIID subunit 1b-like protein
arTal_v1_Chr1_+_25016402_25016402 0.71 AT1G67030.1
ZFP6
zinc finger protein 6
arTal_v1_Chr3_+_20578922_20578922 0.71 AT3G55510.1
AT3G55510.2
RBL
Noc2p family
arTal_v1_Chr3_+_5705541_5705541 0.70 AT3G16770.1
EBP
ethylene-responsive element binding protein
arTal_v1_Chr3_-_19139423_19139423 0.70 AT3G51600.1
LTP5
lipid transfer protein 5
arTal_v1_Chr4_-_13016235_13016235 0.70 AT4G25470.1
CBF2
C-repeat/DRE binding factor 2
arTal_v1_Chr1_-_11333540_11333540 0.69 AT1G31660.1
AT1G31660
bystin-like protein
arTal_v1_Chr3_-_18534415_18534415 0.69 AT3G49990.1
AT3G49990
Low temperature viability protein
arTal_v1_Chr1_+_18400003_18400066 0.68 AT1G49720.1
AT1G49720.2
AT1G49720.3
ABF1
abscisic acid responsive element-binding factor 1
arTal_v1_Chr3_+_1225919_1225919 0.68 AT3G04550.1
AT3G04550
rubisco accumulation factor-like protein
arTal_v1_Chr4_+_17739514_17739514 0.68 AT4G37750.1
ANT
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr2_-_9056481_9056481 0.67 AT2G21130.1
AT2G21130
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
arTal_v1_Chr1_-_29459493_29459493 0.67 AT1G78290.2
AT1G78290.3
SNRK2-8
Protein kinase superfamily protein
arTal_v1_Chr1_+_29759030_29759158 0.66 AT1G79110.2
AT1G79110.3
AT1G79110.1
BRG2
zinc ion binding protein
arTal_v1_Chr2_+_18834011_18834149 0.65 AT2G45720.3
AT2G45720.2
AT2G45720.4
AT2G45720.5
AT2G45720
ARM repeat superfamily protein
arTal_v1_Chr4_-_7195214_7195216 0.65 AT4G12000.3
AT4G12000.2
AT4G12000.1
AT4G12000
SNARE associated Golgi protein family
arTal_v1_Chr5_-_17755742_17755768 0.65 AT5G44110.2
AT5G44110.4
AT5G44110.3
AT5G44110.1
ABCI21
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr4_-_11850436_11850436 0.65 AT4G22490.1
AT4G22490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr1_-_22866666_22866666 0.65 AT1G61870.1
PPR336
pentatricopeptide repeat 336
arTal_v1_Chr3_-_4042075_4042075 0.65 AT3G12710.1
AT3G12710
DNA glycosylase superfamily protein
arTal_v1_Chr3_-_4974521_4974534 0.65 AT3G14810.1
AT3G14810.2
MSL5
mechanosensitive channel of small conductance-like 5
arTal_v1_Chr1_-_6378580_6378580 0.65 AT1G18540.1
AT1G18540
Ribosomal protein L6 family protein
arTal_v1_Chr1_+_5638779_5638779 0.65 AT1G16500.1
AT1G16500
filamentous hemagglutinin transporter
arTal_v1_Chr2_-_4007044_4007044 0.65 AT2G10410.1
SADHU1-1

arTal_v1_Chr3_-_5148340_5148340 0.65 AT3G15300.1
AT3G15300
VQ motif-containing protein
arTal_v1_Chr3_+_3285832_3285832 0.65 AT3G10530.1
AT3G10530
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr3_+_4403355_4403355 0.65 AT3G13510.1
AT3G13510
carboxyl-terminal peptidase, putative (DUF239)
arTal_v1_Chr1_-_18360426_18360447 0.64 AT1G49600.2
AT1G49600.1
AT1G49600.3
RBP47A
RNA-binding protein 47A
arTal_v1_Chr5_+_17130186_17130186 0.64 AT5G42720.1
AT5G42720
Glycosyl hydrolase family 17 protein
arTal_v1_Chr4_+_12264462_12264462 0.64 AT4G23500.1
AT4G23500
Pectin lyase-like superfamily protein
arTal_v1_Chr1_+_1191519_1191519 0.64 AT1G04420.1
AT1G04420
NAD(P)-linked oxidoreductase superfamily protein
arTal_v1_Chr2_-_9266393_9266393 0.64 AT2G21660.2
GRP7
cold, circadian rhythm, and rna binding 2
arTal_v1_Chr3_-_5892216_5892332 0.64 AT3G17240.2
AT3G17240.3
AT3G17240.1
mtLPD2
lipoamide dehydrogenase 2
arTal_v1_Chr5_+_22515391_22515440 0.64 AT5G55580.1
AT5G55580.3
AT5G55580.2
AT5G55580
Mitochondrial transcription termination factor family protein
arTal_v1_Chr2_-_7153430_7153430 0.64 AT2G16500.1
ADC1
arginine decarboxylase 1
arTal_v1_Chr5_+_17951442_17951449 0.63 AT5G44565.2
AT5G44565.1
AT5G44565.3
AT5G44565
transmembrane protein
arTal_v1_Chr5_+_7946285_7946285 0.63 AT5G23575.1
AT5G23575
Transmembrane CLPTM1 family protein
arTal_v1_Chr3_-_4231408_4231408 0.63 AT3G13160.1
AT3G13160
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_+_18305445_18305445 0.63 AT1G49450.1
AT1G49450
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr3_+_3942257_3942257 0.63 AT3G12390.1
AT3G12390
Nascent polypeptide-associated complex (NAC), alpha subunit family protein
arTal_v1_Chr5_-_8406132_8406151 0.62 AT5G24570.1
AT5G24575.1
AT5G24570
AT5G24575
hypothetical protein
hypothetical protein
arTal_v1_Chr3_+_10338148_10338148 0.62 AT3G27880.1
AT3G27880
hypothetical protein (DUF1645)
arTal_v1_Chr1_-_1375742_1375821 0.62 AT1G04870.1
AT1G04870.2
PRMT10
protein arginine methyltransferase 10
arTal_v1_Chr5_-_20111806_20111806 0.62 AT5G49560.1
AT5G49560
Putative methyltransferase family protein
arTal_v1_Chr2_-_14746124_14746124 0.62 AT2G34960.1
CAT5
cationic amino acid transporter 5
arTal_v1_Chr5_-_15548293_15548293 0.62 AT5G38830.1
AT5G38830
Cysteinyl-tRNA synthetase, class Ia family protein
arTal_v1_Chr5_-_8659352_8659352 0.62 AT5G25110.1
CIPK25
CBL-interacting protein kinase 25
arTal_v1_Chr5_-_5609589_5609589 0.62 AT5G17050.1
UGT78D2
UDP-glucosyl transferase 78D2
arTal_v1_Chr5_-_24456115_24456115 0.61 AT5G60790.1
ABCF1
ABC transporter family protein
arTal_v1_Chr4_+_1306313_1306313 0.61 AT4G02940.1
AT4G02940
oxidoreductase, 2OG-Fe(II) oxygenase family protein
arTal_v1_Chr5_+_2202364_2202397 0.61 AT5G07090.1
AT5G07090.3
AT5G07090.2
AT5G07090
Ribosomal protein S4 (RPS4A) family protein
arTal_v1_Chr5_+_20070489_20070489 0.61 AT5G49480.1
CP1
Ca2+-binding protein 1
arTal_v1_Chr5_+_16161449_16161449 0.61 AT5G40390.1
SIP1
Raffinose synthase family protein
arTal_v1_Chr2_-_9266557_9266557 0.61 AT2G21660.1
GRP7
cold, circadian rhythm, and rna binding 2
arTal_v1_Chr5_-_25978439_25978439 0.61 AT5G65040.1
AT5G65040
senescence-associated family protein (DUF581)
arTal_v1_Chr3_+_7275645_7275706 0.61 AT3G20810.1
AT3G20810.4
AT3G20810.2
AT3G20810.5
AT3G20810.3
JMJD5
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr1_+_18416474_18416475 0.61 AT1G49760.2
AT1G49760.1
PAB8
poly(A) binding protein 8
arTal_v1_Chr1_-_24865848_24865848 0.60 AT1G66670.1
CLPP3
CLP protease proteolytic subunit 3
arTal_v1_Chr1_+_4467094_4467094 0.60 AT1G13110.1
CYP71B7
cytochrome P450, family 71 subfamily B, polypeptide 7
arTal_v1_Chr1_+_18870059_18870059 0.60 AT1G50920.1
AT1G50920
Nucleolar GTP-binding protein
arTal_v1_Chr4_-_13019400_13019400 0.60 AT4G25480.1
DREB1A
dehydration response element B1A
arTal_v1_Chr5_-_5862462_5862475 0.60 AT5G17760.2
AT5G17760.1
AT5G17760
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr3_+_673428_673428 0.60 AT3G02990.1
HSFA1E
heat shock transcription factor A1E
arTal_v1_Chr1_-_27732273_27732273 0.60 AT1G73730.2
EIL3
ETHYLENE-INSENSITIVE3-like 3
arTal_v1_Chr1_+_23230922_23230922 0.60 AT1G62740.1
Hop2
stress-inducible protein
arTal_v1_Chr1_-_9451768_9451768 0.60 AT1G27200.1
AT1G27200
glycosyltransferase family protein (DUF23)
arTal_v1_Chr1_+_23337167_23337167 0.60 AT1G62990.1
KNAT7
homeobox knotted-like protein
arTal_v1_Chr5_-_1994824_1994961 0.60 AT5G06530.2
AT5G06530.3
AT5G06530.4
AT5G06530.1
ABCG22
ABC-2 type transporter family protein
arTal_v1_Chr1_+_338241_338241 0.60 AT1G01970.1
AT1G01970
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_-_29034822_29034822 0.59 AT1G77280.2
AT1G77280.1
AT1G77280
kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
arTal_v1_Chr5_+_4206738_4206784 0.59 AT5G13200.2
AT5G13200.1
AT5G13200
GRAM domain family protein
arTal_v1_Chr3_+_22337791_22337791 0.59 AT3G60440.1
AT3G60440.2
AT3G60440
Phosphoglycerate mutase family protein
arTal_v1_Chr5_-_26120581_26120581 0.59 AT5G65360.1
AT5G65360
Histone superfamily protein
arTal_v1_Chr4_-_17123855_17123855 0.59 AT4G36180.1
AT4G36180
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr5_-_25528013_25528013 0.59 AT5G63790.1
NAC102
NAC domain containing protein 102
arTal_v1_Chr1_+_27778984_27778984 0.59 AT1G73870.1
BBX16
B-box type zinc finger protein with CCT domain-containing protein
arTal_v1_Chr2_+_17367492_17367492 0.58 AT2G41660.1
MIZ1
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
arTal_v1_Chr2_-_15560755_15560755 0.58 AT2G37040.1
PAL1
PHE ammonia lyase 1
arTal_v1_Chr1_-_28466971_28466971 0.58 AT1G75820.1
CLV1
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr4_+_18160903_18160903 0.58 AT4G38960.2
AT4G38960.6
AT4G38960.5
AT4G38960.1
AT4G38960.4
BBX19
B-box type zinc finger family protein
arTal_v1_Chr4_-_1046993_1047105 0.58 AT4G02380.2
AT4G02380.1
AT4G02380.3
SAG21
senescence-associated gene 21
arTal_v1_Chr3_+_6393747_6393747 0.57 AT3G18560.1
AT3G18560
hypothetical protein
arTal_v1_Chr1_-_22317070_22317070 0.57 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
arTal_v1_Chr5_+_337128_337128 0.57 AT5G01870.1
AT5G01870
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr1_+_28177670_28177670 0.57 AT1G75040.1
PR5
pathogenesis-related protein 5
arTal_v1_Chr5_-_15011257_15011257 0.56 AT5G37790.1
AT5G37790
Protein kinase superfamily protein
arTal_v1_Chr3_-_4235814_4235814 0.56 AT3G13175.1
AT3G13175
transmembrane protein
arTal_v1_Chr1_-_21430910_21430910 0.56 AT1G57860.1
AT1G57860
Translation protein SH3-like family protein
arTal_v1_Chr1_-_6278150_6278258 0.56 AT1G18250.2
AT1G18250.1
ATLP-1
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr3_-_9492655_9492655 0.56 AT3G25920.1
RPL15
ribosomal protein L15
arTal_v1_Chr3_-_8807460_8807460 0.56 AT3G24300.1
AMT1%3B3
ammonium transporter 1;3
arTal_v1_Chr1_+_11181504_11181504 0.56 AT1G31280.1
AGO2
Argonaute family protein
arTal_v1_Chr1_-_7053745_7053745 0.56 AT1G20370.1
AT1G20370
Pseudouridine synthase family protein
arTal_v1_Chr2_+_14746236_14746236 0.56 AT2G34970.1
AT2G34970
Trimeric LpxA-like enzyme
arTal_v1_Chr3_-_2699257_2699257 0.55 AT3G08860.2
PYD4
PYRIMIDINE 4
arTal_v1_Chr4_-_16644928_16644928 0.55 AT4G34950.1
AT4G34950
Major facilitator superfamily protein
arTal_v1_Chr2_+_13693094_13693105 0.55 AT2G32250.4
AT2G32250.2
AT2G32250.8
AT2G32250.7
AT2G32250.5
AT2G32250.3
AT2G32250.1
AT2G32250.6
FRS2
FAR1-related sequence 2
arTal_v1_Chr4_-_9935685_9935685 0.55 AT4G17880.1
MYC4
Basic helix-loop-helix (bHLH) DNA-binding family protein
arTal_v1_Chr2_-_15797059_15797059 0.55 AT2G37660.1
AT2G37660
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr5_-_25528281_25528281 0.55 AT5G63790.2
NAC102
NAC domain containing protein 102
arTal_v1_Chr5_+_23883356_23883356 0.55 AT5G59180.1
NRPB7
DNA-directed RNA polymerase II
arTal_v1_Chr1_+_27338034_27338062 0.55 AT1G72600.2
AT1G72600.1
AT1G72600
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr5_-_7341791_7341791 0.55 AT5G22140.2
AT5G22140
FAD/NAD(P)-binding oxidoreductase family protein
arTal_v1_Chr2_-_17065813_17065813 0.55 AT2G40900.1
UMAMIT11
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr2_-_10254641_10254641 0.55 AT2G24120.1
AT2G24120.2
SCA3
DNA/RNA polymerases superfamily protein
arTal_v1_Chr2_-_19287590_19287590 0.54 AT2G46940.1
AT2G46940
fold protein
arTal_v1_Chr2_-_6833777_6833777 0.54 AT2G15690.1
AT2G15690
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_+_16579936_16579936 0.54 AT5G41410.1
BEL1
POX (plant homeobox) family protein
arTal_v1_Chr5_-_7341959_7341959 0.54 AT5G22140.1
AT5G22140
FAD/NAD(P)-binding oxidoreductase family protein
arTal_v1_Chr5_+_3111945_3111945 0.54 AT5G09970.1
CYP78A7
cytochrome P450, family 78, subfamily A, polypeptide 7
arTal_v1_Chr2_+_9592956_9592956 0.53 AT2G22590.1
AT2G22590
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr2_+_18328322_18328322 0.53 AT2G44410.1
AT2G44410
RING/U-box superfamily protein
arTal_v1_Chr5_+_642554_642554 0.53 AT5G02820.1
RHL2
Spo11/DNA topoisomerase VI, subunit A protein
arTal_v1_Chr5_+_25248690_25248690 0.53 AT5G62900.1
AT5G62900
basic-leucine zipper transcription factor K
arTal_v1_Chr5_-_5310951_5310951 0.53 AT5G16250.1
AT5G16250
transmembrane protein
arTal_v1_Chr1_-_20028756_20028756 0.53 AT1G53645.1
AT1G53645
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr3_-_2699420_2699420 0.53 AT3G08860.1
PYD4
PYRIMIDINE 4
arTal_v1_Chr4_+_16904059_16904059 0.53 AT4G35630.1
PSAT
phosphoserine aminotransferase
arTal_v1_Chr3_+_9396272_9396272 0.53 AT3G25730.1
EDF3
ethylene response DNA binding factor 3
arTal_v1_Chr5_+_8863224_8863224 0.53 AT5G25460.1
DGR2
transmembrane protein, putative (Protein of unknown function, DUF642)
arTal_v1_Chr4_-_16344818_16344818 0.53 AT4G34131.1
UGT73B3
UDP-glucosyl transferase 73B3
arTal_v1_Chr1_-_27732683_27732683 0.53 AT1G73730.1
EIL3
ETHYLENE-INSENSITIVE3-like 3
arTal_v1_Chr5_+_12558154_12558154 0.53 AT5G33290.1
XGD1
xylogalacturonan deficient 1
arTal_v1_Chr1_+_3611490_3611490 0.53 AT1G10850.1
AT1G10850
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr4_+_18466519_18466519 0.53 AT4G39795.1
AT4G39795
hypothetical protein (DUF581)
arTal_v1_Chr3_+_19421397_19421397 0.52 AT3G52380.1
CP33
chloroplast RNA-binding protein 33
arTal_v1_Chr1_-_30142697_30142697 0.52 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_-_230051_230051 0.52 AT5G01600.1
FER1
ferretin 1
arTal_v1_Chr5_-_25866972_25867025 0.52 AT5G64700.2
AT5G64700.1
UMAMIT21
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr1_+_26038905_26038905 0.52 AT1G69260.1
AFP1
ABI five binding protein
arTal_v1_Chr5_+_3441751_3441751 0.51 AT5G10920.1
AT5G10920
L-Aspartase-like family protein
arTal_v1_Chr4_-_8240324_8240388 0.51 AT4G14310.2
AT4G14310.1
AT4G14310
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr4_+_597187_597187 0.51 AT4G01440.5
UMAMIT31
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr3_-_7457393_7457404 0.51 AT3G21240.2
AT3G21240.1
AT3G21240.3
4CL2
4-coumarate:CoA ligase 2
arTal_v1_Chr3_-_20048190_20048190 0.51 AT3G54140.2
PTR1
peptide transporter 1
arTal_v1_Chr3_-_3627273_3627273 0.51 AT3G11520.2
AT3G11520.1
CYCB1%3B3
CYCLIN B1;3
arTal_v1_Chr5_+_10632241_10632241 0.51 AT5G28626.1
SADHU1-3

arTal_v1_Chr5_-_5251179_5251179 0.51 AT5G16070.1
AT5G16070
TCP-1/cpn60 chaperonin family protein
arTal_v1_Chr4_+_11306945_11306945 0.51 AT4G21210.2
AT4G21210.1
RP1
PPDK regulatory protein
arTal_v1_Chr4_+_10703348_10703348 0.51 AT4G19680.1
AT4G19680.2
IRT2
iron regulated transporter 2

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G28370

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.4 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.4 2.3 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.4 3.5 GO:0009819 drought recovery(GO:0009819)
0.4 0.4 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.3 1.2 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.3 1.5 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.3 0.8 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.2 1.0 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.2 0.9 GO:0006527 arginine catabolic process(GO:0006527)
0.2 0.7 GO:0051291 protein heterooligomerization(GO:0051291)
0.2 0.4 GO:0015802 basic amino acid transport(GO:0015802)
0.2 1.1 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.2 0.9 GO:2000036 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.2 0.6 GO:0035247 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.2 0.6 GO:0006059 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.2 0.6 GO:0048255 mRNA stabilization(GO:0048255)
0.2 0.8 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.2 1.2 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.2 0.8 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.2 0.4 GO:2000082 regulation of vitamin metabolic process(GO:0030656) regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.2 0.7 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.2 1.8 GO:0006880 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.2 2.3 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.2 2.0 GO:0009608 response to symbiont(GO:0009608)
0.2 0.5 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.2 0.5 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.2 0.6 GO:0015692 lead ion transport(GO:0015692)
0.2 0.8 GO:1903960 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.2 0.6 GO:0043092 L-amino acid import(GO:0043092) L-glutamate import(GO:0051938)
0.2 0.6 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.2 0.6 GO:0006423 cysteinyl-tRNA aminoacylation(GO:0006423)
0.1 0.4 GO:0035436 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.1 0.6 GO:0048480 stigma development(GO:0048480)
0.1 0.4 GO:0031054 pre-miRNA processing(GO:0031054)
0.1 0.4 GO:1904062 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.1 0.7 GO:0000056 ribosomal small subunit export from nucleus(GO:0000056)
0.1 0.4 GO:0043132 NAD transport(GO:0043132)
0.1 0.5 GO:1901181 cellular response to alkaloid(GO:0071312) cellular response to caffeine(GO:0071313) cellular response to purine-containing compound(GO:0071415) negative regulation of cellular response to caffeine(GO:1901181)
0.1 0.8 GO:0010338 leaf formation(GO:0010338)
0.1 0.5 GO:0090342 regulation of cell aging(GO:0090342)
0.1 0.4 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 0.4 GO:0032196 transposition(GO:0032196)
0.1 0.6 GO:0042550 photosystem I stabilization(GO:0042550)
0.1 1.2 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 0.4 GO:0009093 cysteine catabolic process(GO:0009093)
0.1 0.4 GO:0000491 small nucleolar ribonucleoprotein complex assembly(GO:0000491)
0.1 0.4 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.1 0.4 GO:0006436 tryptophanyl-tRNA aminoacylation(GO:0006436)
0.1 0.6 GO:0060919 auxin influx(GO:0060919)
0.1 1.1 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.1 0.2 GO:0010520 regulation of reciprocal meiotic recombination(GO:0010520)
0.1 0.6 GO:0006106 fumarate metabolic process(GO:0006106)
0.1 0.8 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 0.4 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.1 0.5 GO:0033306 phytol metabolic process(GO:0033306)
0.1 0.5 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.1 0.3 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.1 0.3 GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process(GO:1990116)
0.1 0.1 GO:0055122 response to very low light intensity stimulus(GO:0055122)
0.1 0.3 GO:0015696 ammonium transport(GO:0015696)
0.1 0.8 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 0.3 GO:0007019 microtubule depolymerization(GO:0007019) metaxylem development(GO:0090058)
0.1 0.2 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.1 1.1 GO:0009088 threonine biosynthetic process(GO:0009088)
0.1 0.5 GO:0000706 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.1 0.3 GO:0009915 phloem sucrose loading(GO:0009915)
0.1 0.1 GO:0061014 positive regulation of mRNA catabolic process(GO:0061014)
0.1 0.3 GO:0043090 amino acid import(GO:0043090)
0.1 1.3 GO:0016577 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.1 0.6 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.1 1.0 GO:0098659 inorganic cation import into cell(GO:0098659) inorganic ion import into cell(GO:0099587)
0.1 0.5 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.1 0.3 GO:0006210 thymine catabolic process(GO:0006210) uracil catabolic process(GO:0006212) beta-alanine biosynthetic process(GO:0019483) thymine metabolic process(GO:0019859)
0.1 0.5 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 1.9 GO:0009641 shade avoidance(GO:0009641)
0.1 0.4 GO:0033512 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.1 0.4 GO:0009660 amyloplast organization(GO:0009660)
0.1 0.9 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 1.4 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.1 0.3 GO:2000001 regulation of DNA damage checkpoint(GO:2000001)
0.1 0.2 GO:0010376 stomatal complex formation(GO:0010376)
0.1 0.5 GO:1901562 response to paraquat(GO:1901562)
0.1 0.5 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 0.3 GO:0033240 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.1 0.4 GO:1902315 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.1 0.8 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.1 0.3 GO:0042353 fucose biosynthetic process(GO:0042353)
0.1 0.3 GO:0051202 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.1 0.6 GO:0010148 transpiration(GO:0010148)
0.1 0.3 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.1 0.3 GO:0033388 putrescine metabolic process(GO:0009445) putrescine biosynthetic process(GO:0009446) putrescine biosynthetic process from arginine(GO:0033388)
0.1 0.3 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.1 0.3 GO:0006517 protein deglycosylation(GO:0006517)
0.1 0.2 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.1 0.4 GO:1901535 regulation of DNA demethylation(GO:1901535)
0.1 0.2 GO:0051101 regulation of DNA binding(GO:0051101)
0.1 0.3 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 0.2 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.1 0.7 GO:0071324 cellular response to disaccharide stimulus(GO:0071324) cellular response to sucrose stimulus(GO:0071329)
0.1 0.4 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.1 0.2 GO:0006424 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.1 0.4 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.1 0.2 GO:0055047 generative cell mitosis(GO:0055047)
0.1 0.2 GO:0071569 protein ufmylation(GO:0071569)
0.1 0.2 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 0.6 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.1 0.2 GO:1900151 regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.1 0.9 GO:0071451 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.1 0.3 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.1 0.6 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.1 0.4 GO:1990169 detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169)
0.1 0.3 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.1 0.4 GO:0010587 miRNA catabolic process(GO:0010587)
0.1 0.3 GO:0030203 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.1 0.2 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.1 0.2 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.1 0.4 GO:0009303 rRNA transcription(GO:0009303)
0.1 0.5 GO:0015867 ADP transport(GO:0015866) ATP transport(GO:0015867)
0.1 0.9 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.1 0.4 GO:0007041 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.1 0.5 GO:0051646 mitochondrion localization(GO:0051646)
0.1 1.3 GO:0042726 flavin-containing compound metabolic process(GO:0042726)
0.1 0.2 GO:0010042 response to manganese ion(GO:0010042)
0.1 0.7 GO:0010315 auxin efflux(GO:0010315)
0.1 0.4 GO:0006566 threonine metabolic process(GO:0006566)
0.1 0.6 GO:0031125 rRNA 3'-end processing(GO:0031125)
0.1 0.3 GO:0016598 protein arginylation(GO:0016598)
0.1 0.3 GO:0006409 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.1 0.3 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 0.3 GO:0001578 microtubule bundle formation(GO:0001578)
0.1 2.2 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.1 0.2 GO:0050996 positive regulation of fatty acid beta-oxidation(GO:0032000) positive regulation of lipid catabolic process(GO:0050996)
0.1 0.3 GO:0050993 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.1 0.2 GO:0010254 nectary development(GO:0010254) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.1 0.8 GO:0031539 positive regulation of anthocyanin metabolic process(GO:0031539)
0.1 0.3 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.1 0.3 GO:0019388 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.1 0.3 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 0.6 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 0.3 GO:0009193 UDP biosynthetic process(GO:0006225) ribonucleoside diphosphate biosynthetic process(GO:0009188) pyrimidine ribonucleoside diphosphate metabolic process(GO:0009193) pyrimidine ribonucleoside diphosphate biosynthetic process(GO:0009194) UDP metabolic process(GO:0046048)
0.1 0.4 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.1 0.3 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 0.5 GO:0042182 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.1 1.0 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 4.0 GO:0034605 cellular response to heat(GO:0034605)
0.1 0.4 GO:0000719 photoreactive repair(GO:0000719)
0.1 0.3 GO:0043461 proton-transporting ATP synthase complex assembly(GO:0043461) proton-transporting ATP synthase complex biogenesis(GO:0070272)
0.1 0.3 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.1 0.6 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.1 0.5 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.1 0.2 GO:0080051 cutin transport(GO:0080051)
0.1 1.5 GO:0031145 anaphase-promoting complex-dependent catabolic process(GO:0031145)
0.1 0.2 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.1 0.2 GO:0031086 nuclear-transcribed mRNA catabolic process, deadenylation-independent decay(GO:0031086) deadenylation-independent decapping of nuclear-transcribed mRNA(GO:0031087)
0.1 0.4 GO:0018027 peptidyl-lysine dimethylation(GO:0018027)
0.1 0.9 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.1 0.2 GO:0010586 miRNA metabolic process(GO:0010586) somatic stem cell population maintenance(GO:0035019)
0.1 0.4 GO:0051693 negative regulation of actin filament depolymerization(GO:0030835) negative regulation of protein complex disassembly(GO:0043242) actin filament capping(GO:0051693) negative regulation of protein depolymerization(GO:1901880)
0.1 0.2 GO:0010589 leaf proximal/distal pattern formation(GO:0010589) viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 1.2 GO:0009959 negative gravitropism(GO:0009959)
0.1 0.2 GO:0035335 peptidyl-tyrosine dephosphorylation(GO:0035335)
0.1 1.2 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 0.9 GO:0046040 IMP metabolic process(GO:0046040)
0.1 1.2 GO:0051788 response to misfolded protein(GO:0051788)
0.1 0.1 GO:0019401 alditol biosynthetic process(GO:0019401)
0.1 0.3 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 0.5 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.1 0.2 GO:0080182 histone H3-K4 trimethylation(GO:0080182)
0.1 0.3 GO:0071731 response to nitric oxide(GO:0071731)
0.1 0.6 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 0.5 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.1 1.3 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.1 0.2 GO:0009650 UV protection(GO:0009650)
0.1 0.4 GO:0005513 detection of calcium ion(GO:0005513)
0.1 0.2 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.1 0.6 GO:0060321 acceptance of pollen(GO:0060321)
0.1 0.5 GO:0070129 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.1 0.2 GO:0080029 cellular response to boron-containing substance levels(GO:0080029)
0.1 1.5 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.1 0.4 GO:0019079 viral genome replication(GO:0019079)
0.0 1.8 GO:0010286 heat acclimation(GO:0010286)
0.0 0.5 GO:0010380 regulation of chlorophyll biosynthetic process(GO:0010380)
0.0 0.0 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.3 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.0 0.1 GO:0071481 cellular response to X-ray(GO:0071481)
0.0 0.1 GO:0009747 hexokinase-dependent signaling(GO:0009747) hexose mediated signaling(GO:0009757)
0.0 0.5 GO:0048766 root hair initiation(GO:0048766)
0.0 0.7 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 1.3 GO:0016226 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.7 GO:0045824 negative regulation of innate immune response(GO:0045824)
0.0 0.5 GO:0080144 amino acid homeostasis(GO:0080144)
0.0 0.3 GO:0032781 positive regulation of ATPase activity(GO:0032781)
0.0 0.3 GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process(GO:0006207)
0.0 0.1 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.0 0.4 GO:0043486 histone exchange(GO:0043486)
0.0 1.8 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.0 0.2 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.0 0.1 GO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.0 0.4 GO:0010088 phloem development(GO:0010088)
0.0 0.7 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.8 GO:0042762 regulation of sulfur metabolic process(GO:0042762)
0.0 0.5 GO:0060261 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.0 0.6 GO:0010274 hydrotropism(GO:0010274)
0.0 0.6 GO:0010099 regulation of photomorphogenesis(GO:0010099)
0.0 0.9 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.5 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 0.1 GO:0032877 positive regulation of DNA endoreduplication(GO:0032877) positive regulation of DNA-dependent DNA replication(GO:2000105)
0.0 0.3 GO:0015909 long-chain fatty acid transport(GO:0015909)
0.0 1.0 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.4 GO:0000731 DNA synthesis involved in DNA repair(GO:0000731)
0.0 0.2 GO:0043479 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.0 0.1 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.0 0.6 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.2 GO:1990542 mitochondrial transmembrane transport(GO:1990542)
0.0 0.7 GO:0032543 mitochondrial translation(GO:0032543)
0.0 0.3 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.2 GO:0010390 histone monoubiquitination(GO:0010390)
0.0 2.2 GO:0006413 translational initiation(GO:0006413)
0.0 0.1 GO:0030100 regulation of endocytosis(GO:0030100)
0.0 0.6 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 0.3 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.0 0.1 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.0 0.2 GO:0007349 cellularization(GO:0007349)
0.0 1.0 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.5 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 0.2 GO:0035627 ceramide transport(GO:0035627)
0.0 0.6 GO:0006826 iron ion transport(GO:0006826)
0.0 3.4 GO:0018209 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.0 0.1 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) establishment of tissue polarity(GO:0007164) tissue morphogenesis(GO:0048729)
0.0 0.4 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.5 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.5 GO:0043044 ATP-dependent chromatin remodeling(GO:0043044)
0.0 0.2 GO:0016120 carotene biosynthetic process(GO:0016120)
0.0 0.4 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.6 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.0 0.4 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.0 0.6 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.3 GO:0015914 phospholipid transport(GO:0015914)
0.0 0.4 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.0 0.2 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.1 GO:0009647 skotomorphogenesis(GO:0009647)
0.0 0.6 GO:0031167 rRNA methylation(GO:0031167)
0.0 0.2 GO:0010067 procambium histogenesis(GO:0010067)
0.0 0.2 GO:0080009 mRNA methylation(GO:0080009)
0.0 0.5 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.0 0.2 GO:0018874 benzoate metabolic process(GO:0018874)
0.0 0.5 GO:1900376 regulation of secondary metabolite biosynthetic process(GO:1900376)
0.0 0.1 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.0 0.1 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.0 0.2 GO:0046864 isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865)
0.0 0.7 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.1 GO:0010541 acropetal auxin transport(GO:0010541)
0.0 0.3 GO:1905156 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155) negative regulation of photosynthesis(GO:1905156)
0.0 0.1 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.0 0.3 GO:0010044 response to aluminum ion(GO:0010044)
0.0 1.0 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.0 0.1 GO:0007000 nucleolus organization(GO:0007000)
0.0 0.5 GO:0009880 embryonic pattern specification(GO:0009880)
0.0 0.8 GO:0006418 tRNA aminoacylation for protein translation(GO:0006418)
0.0 0.2 GO:0016926 protein desumoylation(GO:0016926)
0.0 1.6 GO:0042176 regulation of protein catabolic process(GO:0042176)
0.0 0.3 GO:0048317 seed morphogenesis(GO:0048317)
0.0 0.4 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)
0.0 1.6 GO:0009827 plant-type cell wall modification(GO:0009827)
0.0 1.0 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.2 GO:0046822 regulation of nucleocytoplasmic transport(GO:0046822)
0.0 0.1 GO:0015940 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.0 0.1 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.0 0.9 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.3 GO:0017157 regulation of exocytosis(GO:0017157)
0.0 0.3 GO:0051555 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.0 0.2 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.0 1.6 GO:0006972 hyperosmotic response(GO:0006972)
0.0 0.1 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.0 1.9 GO:0006869 lipid transport(GO:0006869)
0.0 0.4 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 0.3 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.0 0.3 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.0 0.1 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.0 0.2 GO:1990937 xylan acetylation(GO:1990937)
0.0 0.0 GO:0061062 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.0 0.2 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 0.1 GO:0006273 lagging strand elongation(GO:0006273)
0.0 0.6 GO:0006754 ATP biosynthetic process(GO:0006754) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.0 0.3 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 0.2 GO:0006048 UDP-N-acetylglucosamine metabolic process(GO:0006047) UDP-N-acetylglucosamine biosynthetic process(GO:0006048) amino sugar biosynthetic process(GO:0046349)
0.0 0.8 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 0.5 GO:0000959 mitochondrial RNA metabolic process(GO:0000959)
0.0 0.1 GO:0046203 spermidine catabolic process(GO:0046203)
0.0 0.3 GO:1902074 response to salt(GO:1902074)
0.0 0.1 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.0 0.2 GO:0009113 purine nucleobase biosynthetic process(GO:0009113)
0.0 0.2 GO:0051814 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.1 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 0.1 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.0 0.5 GO:0010091 trichome branching(GO:0010091)
0.0 0.2 GO:0015718 monocarboxylic acid transport(GO:0015718)
0.0 0.1 GO:0042732 D-xylose metabolic process(GO:0042732)
0.0 0.6 GO:0045324 late endosome to vacuole transport(GO:0045324)
0.0 0.4 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.1 GO:0000730 DNA recombinase assembly(GO:0000730)
0.0 0.2 GO:0046451 lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 0.1 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 0.1 GO:0010482 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.0 0.1 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.1 GO:0006116 NADH oxidation(GO:0006116)
0.0 0.3 GO:0006265 DNA topological change(GO:0006265)
0.0 0.2 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.3 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.3 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.0 GO:0009720 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.0 0.2 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.0 6.2 GO:0006412 translation(GO:0006412)
0.0 1.4 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.1 GO:0051784 negative regulation of mitotic nuclear division(GO:0045839) negative regulation of nuclear division(GO:0051784)
0.0 0.4 GO:0007030 Golgi organization(GO:0007030)
0.0 0.1 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.0 0.1 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.0 0.2 GO:0071249 cellular response to nitrate(GO:0071249) cellular response to reactive nitrogen species(GO:1902170)
0.0 0.3 GO:0030042 actin filament depolymerization(GO:0030042) protein depolymerization(GO:0051261)
0.0 0.4 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.2 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.0 0.8 GO:0048767 root hair elongation(GO:0048767)
0.0 0.0 GO:0010191 mucilage metabolic process(GO:0010191)
0.0 0.4 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.0 0.2 GO:0070828 heterochromatin organization(GO:0070828)
0.0 0.5 GO:0006626 protein targeting to mitochondrion(GO:0006626)
0.0 0.1 GO:0034427 nuclear-transcribed mRNA catabolic process, exonucleolytic(GO:0000291) nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'(GO:0034427) U4 snRNA 3'-end processing(GO:0034475)
0.0 0.2 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.0 0.1 GO:0010117 photoprotection(GO:0010117)
0.0 0.2 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.3 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.0 0.3 GO:0006897 endocytosis(GO:0006897)
0.0 0.5 GO:0051225 spindle assembly(GO:0051225)
0.0 0.7 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.0 GO:0015868 purine ribonucleotide transport(GO:0015868)
0.0 0.2 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.0 1.7 GO:0006457 protein folding(GO:0006457)
0.0 0.3 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.1 GO:0006526 arginine biosynthetic process(GO:0006526)
0.0 0.1 GO:0043966 histone H3 acetylation(GO:0043966) histone H4 acetylation(GO:0043967)
0.0 0.2 GO:0001510 RNA methylation(GO:0001510)
0.0 0.2 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.0 0.1 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.0 0.1 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.0 0.3 GO:0009902 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.0 0.1 GO:0006552 leucine catabolic process(GO:0006552)
0.0 0.7 GO:0009561 megagametogenesis(GO:0009561)
0.0 0.2 GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.0 0.1 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.0 0.1 GO:0006513 protein monoubiquitination(GO:0006513)
0.0 0.2 GO:0051568 histone H3-K4 methylation(GO:0051568)
0.0 0.1 GO:0007602 phototransduction(GO:0007602) detection of light stimulus(GO:0009583) red, far-red light phototransduction(GO:0009585)
0.0 0.1 GO:0061647 histone H3-K9 methylation(GO:0051567) histone H3-K9 modification(GO:0061647)
0.0 0.1 GO:0036297 interstrand cross-link repair(GO:0036297)
0.0 0.2 GO:0006270 DNA replication initiation(GO:0006270)
0.0 0.1 GO:0006490 oligosaccharide-lipid intermediate biosynthetic process(GO:0006490)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.0 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.2 1.0 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.2 0.7 GO:0030689 Noc complex(GO:0030689)
0.2 0.7 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.2 0.7 GO:0042788 polysomal ribosome(GO:0042788)
0.2 0.8 GO:0034515 proteasome storage granule(GO:0034515)
0.1 0.7 GO:0000812 Swr1 complex(GO:0000812)
0.1 1.0 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 0.4 GO:0005656 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.1 0.4 GO:0005732 small nucleolar ribonucleoprotein complex(GO:0005732)
0.1 0.4 GO:0016323 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.1 0.6 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.1 0.9 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.1 0.3 GO:1990112 RQC complex(GO:1990112)
0.1 0.1 GO:0009528 plastid inner membrane(GO:0009528)
0.1 0.4 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130) clathrin coat of coated pit(GO:0030132)
0.1 0.3 GO:0005775 vacuolar lumen(GO:0005775)
0.1 2.4 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 1.0 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.1 1.0 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 2.2 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.1 0.3 GO:0031897 Tic complex(GO:0031897)
0.1 0.5 GO:0005844 polysome(GO:0005844)
0.1 0.6 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.1 0.5 GO:0070652 HAUS complex(GO:0070652)
0.1 0.5 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.1 0.2 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.1 0.6 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.1 0.4 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.1 0.6 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.1 0.6 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.1 1.0 GO:0005682 U5 snRNP(GO:0005682)
0.1 1.1 GO:0030686 90S preribosome(GO:0030686)
0.1 0.3 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.1 0.6 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.1 0.6 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.7 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.1 0.3 GO:0005719 nuclear euchromatin(GO:0005719)
0.1 0.6 GO:0042555 MCM complex(GO:0042555)
0.1 0.7 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.1 0.5 GO:0009547 plastid ribosome(GO:0009547)
0.1 0.2 GO:0031352 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.1 0.3 GO:0035145 exon-exon junction complex(GO:0035145)
0.1 0.3 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.1 0.2 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.1 0.4 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.1 1.0 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.1 0.3 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0 0.2 GO:0000938 GARP complex(GO:0000938)
0.0 0.6 GO:0000974 Prp19 complex(GO:0000974)
0.0 0.7 GO:0045273 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.0 0.3 GO:0030904 retromer complex(GO:0030904)
0.0 0.4 GO:0035619 root hair tip(GO:0035619)
0.0 0.6 GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain(GO:0033178)
0.0 0.5 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.0 0.5 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.3 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.0 5.5 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.1 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.0 0.9 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.0 0.2 GO:0000796 condensin complex(GO:0000796)
0.0 0.7 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.2 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 0.4 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.6 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.0 1.0 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.1 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.0 0.7 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.0 GO:0005905 clathrin-coated pit(GO:0005905)
0.0 0.3 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.3 GO:0016272 prefoldin complex(GO:0016272)
0.0 0.1 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.0 0.5 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 0.6 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.2 GO:0000813 ESCRT I complex(GO:0000813)
0.0 0.2 GO:0031083 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.0 0.4 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.0 0.5 GO:0005769 early endosome(GO:0005769)
0.0 3.4 GO:0031969 chloroplast membrane(GO:0031969)
0.0 0.3 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0 0.3 GO:0045239 tricarboxylic acid cycle enzyme complex(GO:0045239)
0.0 0.5 GO:0009531 secondary cell wall(GO:0009531)
0.0 1.8 GO:0009524 phragmoplast(GO:0009524)
0.0 0.3 GO:0005778 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 0.3 GO:0010168 ER body(GO:0010168)
0.0 0.5 GO:0000178 exosome (RNase complex)(GO:0000178)
0.0 1.0 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.1 GO:0031261 DNA replication preinitiation complex(GO:0031261)
0.0 0.1 GO:0030286 dynein complex(GO:0030286)
0.0 0.1 GO:0034657 GID complex(GO:0034657)
0.0 16.2 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.8 GO:0032040 small-subunit processome(GO:0032040)
0.0 2.2 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.2 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.6 GO:0030863 cortical cytoskeleton(GO:0030863)
0.0 0.1 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.9 GO:0005764 lysosome(GO:0005764)
0.0 0.1 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 1.0 GO:0000502 proteasome complex(GO:0000502)
0.0 0.5 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.0 0.2 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.0 0.1 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 2.9 GO:0022626 cytosolic ribosome(GO:0022626)
0.0 2.4 GO:0044215 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 4.9 GO:0005730 nucleolus(GO:0005730)
0.0 0.3 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 0.1 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.4 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.2 GO:0009504 cell plate(GO:0009504)
0.0 0.7 GO:0016592 mediator complex(GO:0016592)
0.0 0.2 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.5 GO:0005741 mitochondrial outer membrane(GO:0005741)
0.0 0.2 GO:1903561 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 0.4 GO:1902554 serine/threonine protein kinase complex(GO:1902554)
0.0 3.8 GO:0009941 chloroplast envelope(GO:0009941)
0.0 0.8 GO:0005635 nuclear envelope(GO:0005635)
0.0 1.4 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.1 GO:0008180 COP9 signalosome(GO:0008180)
0.0 0.6 GO:0099568 cell cortex(GO:0005938) cytoplasmic region(GO:0099568)
0.0 0.2 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.8 GO:0045271 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.1 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.0 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.0 0.4 GO:0034708 methyltransferase complex(GO:0034708)
0.0 1.0 GO:0005759 mitochondrial matrix(GO:0005759)
0.0 0.0 GO:0009574 preprophase band(GO:0009574)
0.0 0.1 GO:0005884 actin filament(GO:0005884)
0.0 0.1 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063) Holliday junction resolvase complex(GO:0048476)
0.0 0.1 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.2 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.6 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.1 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.0 0.2 GO:0036464 ribonucleoprotein granule(GO:0035770) cytoplasmic ribonucleoprotein granule(GO:0036464)
0.0 0.1 GO:0035838 site of polarized growth(GO:0030427) growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 23.3 GO:0005829 cytosol(GO:0005829)
0.0 0.1 GO:0000776 kinetochore(GO:0000776)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.3 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.4 1.7 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.4 1.2 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.4 2.4 GO:0019904 protein domain specific binding(GO:0019904)
0.4 1.5 GO:0016649 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.3 1.0 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.3 1.5 GO:0004322 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.2 1.0 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.2 0.7 GO:0004775 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.2 0.7 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.2 0.6 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.2 1.3 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.2 0.6 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.2 1.0 GO:0003680 AT DNA binding(GO:0003680)
0.2 0.5 GO:0070678 preprotein binding(GO:0070678)
0.2 0.5 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.2 0.7 GO:0003935 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.2 0.5 GO:0016842 amidine-lyase activity(GO:0016842)
0.2 0.5 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.2 0.7 GO:0003862 3-isopropylmalate dehydrogenase activity(GO:0003862)
0.2 0.8 GO:0035197 siRNA binding(GO:0035197)
0.2 0.6 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.2 0.6 GO:0004817 cysteine-tRNA ligase activity(GO:0004817)
0.1 1.0 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.1 0.4 GO:0015119 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.1 2.3 GO:0031369 translation initiation factor binding(GO:0031369)
0.1 1.0 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.1 0.6 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.1 0.5 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.4 GO:0045430 chalcone isomerase activity(GO:0045430)
0.1 0.3 GO:0016841 ammonia-lyase activity(GO:0016841)
0.1 1.0 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.4 GO:0004830 tryptophan-tRNA ligase activity(GO:0004830)
0.1 1.4 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.1 0.4 GO:0008517 folic acid transporter activity(GO:0008517)
0.1 0.1 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.1 0.4 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1 0.6 GO:0004333 fumarate hydratase activity(GO:0004333)
0.1 0.4 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.1 0.4 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 0.9 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.7 GO:0015189 L-glutamate transmembrane transporter activity(GO:0005313) arginine transmembrane transporter activity(GO:0015181) L-lysine transmembrane transporter activity(GO:0015189)
0.1 2.5 GO:0008143 poly(A) binding(GO:0008143)
0.1 0.6 GO:0016426 tRNA (adenine) methyltransferase activity(GO:0016426)
0.1 0.4 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.1 0.3 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.1 0.4 GO:0030620 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)
0.1 0.3 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.1 1.3 GO:0002020 protease binding(GO:0002020)
0.1 1.3 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.1 0.7 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.1 0.5 GO:0051740 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.1 0.7 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 0.3 GO:0001054 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.1 0.4 GO:0004149 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.1 0.8 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.1 0.4 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 0.4 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.1 0.4 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.1 0.3 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726) oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 0.3 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 0.8 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.1 1.0 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.1 0.6 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.1 0.3 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.1 0.3 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.1 0.5 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.4 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 0.5 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.2 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.1 0.2 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.1 0.4 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.1 0.3 GO:0000035 acyl binding(GO:0000035)
0.1 0.2 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.1 0.2 GO:0070003 threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.1 0.4 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)
0.1 0.3 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.1 0.7 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.1 0.5 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.1 0.3 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.1 2.3 GO:0048029 monosaccharide binding(GO:0048029)
0.1 0.2 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.1 0.2 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.1 0.5 GO:0032977 membrane insertase activity(GO:0032977)
0.1 0.3 GO:0015245 fatty acid transporter activity(GO:0015245)
0.1 0.4 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.1 0.3 GO:0004057 arginyltransferase activity(GO:0004057)
0.1 0.4 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.1 0.3 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.1 0.3 GO:0009881 photoreceptor activity(GO:0009881)
0.1 0.5 GO:0001671 ATPase activator activity(GO:0001671)
0.1 0.3 GO:0033862 UMP kinase activity(GO:0033862)
0.1 1.2 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 0.8 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 0.6 GO:0016273 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.1 0.4 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.2 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 1.2 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 0.5 GO:0051011 microtubule minus-end binding(GO:0051011)
0.1 0.4 GO:0008443 phosphofructokinase activity(GO:0008443)
0.1 0.7 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 0.2 GO:0016040 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.1 0.4 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.3 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 0.6 GO:0010997 anaphase-promoting complex binding(GO:0010997)
0.1 0.3 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.2 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.1 0.3 GO:0019202 amino acid kinase activity(GO:0019202)
0.1 0.5 GO:0008494 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.1 0.2 GO:0070140 ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.1 0.5 GO:0019903 protein phosphatase binding(GO:0019903)
0.1 1.1 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 1.1 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 1.0 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.1 0.2 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 0.2 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.1 0.2 GO:0004385 guanylate kinase activity(GO:0004385)
0.1 0.3 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.1 0.6 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 0.5 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 0.8 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.7 GO:0004312 fatty acid synthase activity(GO:0004312)
0.0 0.3 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.0 0.2 GO:0008251 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.0 0.8 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.7 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 0.7 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.4 GO:0043495 protein anchor(GO:0043495)
0.0 0.3 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.5 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.2 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.0 0.1 GO:0004359 glutaminase activity(GO:0004359)
0.0 0.1 GO:0000386 second spliceosomal transesterification activity(GO:0000386)
0.0 0.2 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.0 1.5 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.2 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.0 0.3 GO:0004792 thiosulfate sulfurtransferase activity(GO:0004792)
0.0 0.6 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.7 GO:0051117 ATPase binding(GO:0051117)
0.0 0.1 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.0 0.5 GO:0051184 cofactor transporter activity(GO:0051184)
0.0 0.4 GO:0070569 uridylyltransferase activity(GO:0070569)
0.0 0.7 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.2 GO:0004001 adenosine kinase activity(GO:0004001)
0.0 0.5 GO:0015217 ADP transmembrane transporter activity(GO:0015217)
0.0 0.5 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 0.2 GO:0016530 metallochaperone activity(GO:0016530)
0.0 0.4 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.0 0.6 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 2.2 GO:0009931 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.2 GO:0004113 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.0 1.0 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.7 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 1.8 GO:0005319 lipid transporter activity(GO:0005319)
0.0 0.2 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.0 9.2 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.2 GO:0004325 ferrochelatase activity(GO:0004325)
0.0 0.2 GO:0004766 spermidine synthase activity(GO:0004766)
0.0 0.3 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.1 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.0 0.3 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.3 GO:0031078 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.3 GO:0000217 DNA secondary structure binding(GO:0000217) four-way junction DNA binding(GO:0000400)
0.0 0.3 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.0 0.4 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 0.3 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 0.1 GO:0045182 translation repressor activity(GO:0030371) translation regulator activity(GO:0045182)
0.0 0.4 GO:0050308 sugar-phosphatase activity(GO:0050308)
0.0 0.2 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.0 0.1 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.0 0.2 GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity(GO:0008441)
0.0 0.3 GO:0070035 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.4 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.0 0.2 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.0 0.4 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.2 GO:0004793 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.0 3.2 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.3 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 0.3 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.4 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.9 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.0 0.1 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.0 0.3 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.2 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.1 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.0 1.4 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.3 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 0.1 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.0 1.4 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 0.3 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.0 1.7 GO:0043621 protein self-association(GO:0043621)
0.0 0.3 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.4 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.3 GO:0004096 catalase activity(GO:0004096)
0.0 0.3 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 1.4 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.4 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.0 0.1 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.0 0.4 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.4 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.0 0.2 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.1 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.0 0.7 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.3 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.1 GO:0045502 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.0 0.8 GO:0016876 aminoacyl-tRNA ligase activity(GO:0004812) ligase activity, forming carbon-oxygen bonds(GO:0016875) ligase activity, forming aminoacyl-tRNA and related compounds(GO:0016876)
0.0 0.1 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.0 3.6 GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity(GO:0015405)
0.0 0.3 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.0 0.3 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.1 GO:0016886 ligase activity, forming phosphoric ester bonds(GO:0016886)
0.0 0.2 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 0.1 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.0 1.6 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.3 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.0 0.5 GO:0016597 amino acid binding(GO:0016597)
0.0 0.1 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.0 0.1 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.0 0.2 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.0 0.3 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.6 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.5 GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor(GO:0016641)
0.0 0.2 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.1 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.0 0.4 GO:0030276 clathrin binding(GO:0030276)
0.0 1.5 GO:0003724 RNA helicase activity(GO:0003724)
0.0 1.3 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.7 GO:0044390 ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.0 0.0 GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity(GO:0008963)
0.0 0.4 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.2 GO:0003996 acyl-CoA ligase activity(GO:0003996) long-chain fatty acid-CoA ligase activity(GO:0004467) decanoate--CoA ligase activity(GO:0102391)
0.0 0.3 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.2 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.1 GO:0051139 metal ion:proton antiporter activity(GO:0051139)
0.0 0.1 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.1 GO:0030527 structural constituent of chromatin(GO:0030527)
0.0 0.2 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.0 0.2 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 0.5 GO:0051536 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.0 0.4 GO:0008810 cellulase activity(GO:0008810)
0.0 0.1 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.1 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.1 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 0.2 GO:0004124 cysteine synthase activity(GO:0004124)
0.0 0.7 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.2 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.1 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.0 0.1 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 0.2 GO:0008061 chitin binding(GO:0008061)
0.0 0.2 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 0.5 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.2 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.2 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.0 GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.0 0.0 GO:0019902 phosphatase binding(GO:0019902)
0.0 0.2 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.1 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.2 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.0 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.7 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 0.1 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.8 GO:0042393 histone binding(GO:0042393)
0.0 0.4 GO:0036459 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.0 0.1 GO:0015391 nucleobase:cation symporter activity(GO:0015391)
0.0 0.1 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.0 0.1 GO:0016872 intramolecular lyase activity(GO:0016872)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 0.4 PID RAS PATHWAY Regulation of Ras family activation
0.2 0.7 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.1 0.1 PID UPA UPAR PATHWAY Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling
0.1 0.6 PID RET PATHWAY Signaling events regulated by Ret tyrosine kinase
0.1 0.3 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.1 0.4 PID MYC PATHWAY C-MYC pathway
0.1 0.3 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.4 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.2 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton
0.0 0.2 PID P73PATHWAY p73 transcription factor network
0.0 0.2 PID CMYB PATHWAY C-MYB transcription factor network
0.0 0.4 PID FANCONI PATHWAY Fanconi anemia pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.4 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS Genes involved in Synthesis of bile acids and bile salts
0.2 0.6 REACTOME FRS2 MEDIATED CASCADE Genes involved in FRS2-mediated cascade
0.1 0.6 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.1 0.3 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.3 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.1 0.3 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.1 0.6 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.4 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions
0.1 0.4 REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION Genes involved in Platelet activation, signaling and aggregation
0.1 0.4 REACTOME PROTEIN FOLDING Genes involved in Protein folding
0.1 0.3 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.1 0.2 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.1 1.3 REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE Genes involved in SRP-dependent cotranslational protein targeting to membrane
0.1 0.2 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.1 0.2 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.1 0.2 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.1 0.4 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.0 0.6 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.0 0.2 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.0 0.1 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.0 0.2 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.0 0.4 REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS Genes involved in Metabolism of lipids and lipoproteins
0.0 0.3 REACTOME HEMOSTASIS Genes involved in Hemostasis
0.0 0.1 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives