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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G32640

Z-value: 0.38

Transcription factors associated with AT1G32640

Gene Symbol Gene ID Gene Info
AT1G32640
AT1G32640 Basic helix-loop-helix (bHLH) DNA-binding family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYC2arTal_v1_Chr1_-_11801407_11801407-0.554.0e-02Click!

Activity profile of AT1G32640 motif

Sorted Z-values of AT1G32640 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_+_28975255_28975255 2.22 AT1G77120.1
ADH1
alcohol dehydrogenase 1
arTal_v1_Chr1_+_10477885_10477885 0.81 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
arTal_v1_Chr1_-_25049424_25049424 0.35 AT1G67090.2
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
arTal_v1_Chr1_-_25049667_25049667 0.35 AT1G67090.1
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
arTal_v1_Chr4_+_14034536_14034614 0.11 AT4G28370.3
AT4G28370.2
AT4G28370.1
AT4G28370.4
AT4G28370
RING/U-box superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G32640

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.2 GO:0031000 response to caffeine(GO:0031000) response to alkaloid(GO:0043279)
0.0 0.8 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.7 GO:0031977 thylakoid lumen(GO:0031977)
0.0 0.8 GO:0010287 plastoglobule(GO:0010287)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.2 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 0.7 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.0 0.8 GO:0016168 chlorophyll binding(GO:0016168)