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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G46768

Z-value: 0.59

Transcription factors associated with AT1G46768

Gene Symbol Gene ID Gene Info
AT1G46768
AT1G46768 related to AP2 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
RAP2.1arTal_v1_Chr1_-_17266724_172668240.507.2e-02Click!

Activity profile of AT1G46768 motif

Sorted Z-values of AT1G46768 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_+_3019639_3019639 1.32 AT1G09350.1
GolS3
galactinol synthase 3
arTal_v1_Chr1_+_3020221_3020221 1.21 AT1G09350.2
GolS3
galactinol synthase 3
arTal_v1_Chr5_+_21240717_21240717 1.19 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
arTal_v1_Chr5_+_22388782_22388782 0.78 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr5_+_22388521_22388521 0.76 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr5_-_7054281_7054281 0.74 AT5G20830.3
SUS1
sucrose synthase 1
arTal_v1_Chr5_-_7054713_7054713 0.72 AT5G20830.1
SUS1
sucrose synthase 1
arTal_v1_Chr5_-_7055398_7055398 0.70 AT5G20830.2
SUS1
sucrose synthase 1
arTal_v1_Chr4_-_6479165_6479171 0.65 AT4G10480.2
AT4G10480.1
AT4G10480
Nascent polypeptide-associated complex (NAC), alpha subunit family protein
arTal_v1_Chr1_-_7086873_7086873 0.64 AT1G20440.1
COR47
cold-regulated 47
arTal_v1_Chr1_-_507268_507268 0.63 AT1G02460.1
AT1G02460
Pectin lyase-like superfamily protein
arTal_v1_Chr1_+_18035967_18035967 0.63 AT1G48750.1
AT1G48750
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr2_-_19370478_19370478 0.62 AT2G47180.1
GolS1
galactinol synthase 1
arTal_v1_Chr5_+_17973775_17973775 0.61 AT5G44575.1
AT5G44575
hypothetical protein
arTal_v1_Chr2_+_2026162_2026162 0.60 AT2G05520.4
AT2G05520.5
AT2G05520.6
AT2G05520.3
GRP-3
glycine-rich protein 3
arTal_v1_Chr4_+_13074090_13074090 0.59 AT4G25630.1
FIB2
fibrillarin 2
arTal_v1_Chr4_+_12827856_12827937 0.59 AT4G24960.1
AT4G24960.3
AT4G24960.2
HVA22D
HVA22 homologue D
arTal_v1_Chr4_+_10521259_10521379 0.59 AT4G19230.1
AT4G19230.2
CYP707A1
cytochrome P450, family 707, subfamily A, polypeptide 1
arTal_v1_Chr5_+_21020014_21020014 0.58 AT5G51750.1
SBT1.3
subtilase 1.3
arTal_v1_Chr3_-_6212551_6212551 0.55 AT3G18130.1
RACK1C_AT
receptor for activated C kinase 1C
arTal_v1_Chr5_-_17755742_17755768 0.55 AT5G44110.2
AT5G44110.4
AT5G44110.3
AT5G44110.1
ABCI21
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr1_-_17266724_17266824 0.55 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
arTal_v1_Chr2_+_2025991_2025991 0.55 AT2G05520.2
AT2G05520.1
GRP-3
glycine-rich protein 3
arTal_v1_Chr2_+_10662190_10662190 0.53 AT2G25060.1
ENODL14
early nodulin-like protein 14
arTal_v1_Chr3_-_5845220_5845220 0.52 AT3G17130.1
AT3G17130
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr4_+_10703348_10703348 0.51 AT4G19680.1
AT4G19680.2
IRT2
iron regulated transporter 2
arTal_v1_Chr5_+_7328870_7328870 0.50 AT5G22100.1
AT5G22100
RNA cyclase family protein
arTal_v1_Chr5_-_7820760_7820760 0.50 AT5G23220.1
NIC3
nicotinamidase 3
arTal_v1_Chr1_+_23131928_23131928 0.49 AT1G62500.1
AT1G62500
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr2_+_9126263_9126263 0.48 AT2G21320.1
BBX18
B-box zinc finger family protein
arTal_v1_Chr3_-_4235814_4235814 0.48 AT3G13175.1
AT3G13175
transmembrane protein
arTal_v1_Chr2_+_14746236_14746236 0.47 AT2G34970.1
AT2G34970
Trimeric LpxA-like enzyme
arTal_v1_Chr2_+_13693094_13693105 0.47 AT2G32250.4
AT2G32250.2
AT2G32250.8
AT2G32250.7
AT2G32250.5
AT2G32250.3
AT2G32250.1
AT2G32250.6
FRS2
FAR1-related sequence 2
arTal_v1_Chr3_+_4403355_4403355 0.47 AT3G13510.1
AT3G13510
carboxyl-terminal peptidase, putative (DUF239)
arTal_v1_Chr1_-_29064637_29064637 0.46 AT1G77330.1
AT1G77330
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr1_+_23168767_23168767 0.46 AT1G62570.1
FMO GS-OX4
flavin-monooxygenase glucosinolate S-oxygenase 4
arTal_v1_Chr2_+_13814543_13814543 0.46 AT2G32540.1
CSLB04
cellulose synthase-like B4
arTal_v1_Chr1_-_22382422_22382422 0.46 AT1G60790.1
TBL2
trichome birefringence-like protein (DUF828)
arTal_v1_Chr1_+_18416474_18416475 0.45 AT1G49760.2
AT1G49760.1
PAB8
poly(A) binding protein 8
arTal_v1_Chr5_-_990630_990630 0.45 AT5G03760.1
ATCSLA09
Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr2_-_5675995_5675995 0.44 AT2G13610.1
ABCG5
ABC-2 type transporter family protein
arTal_v1_Chr1_-_22719535_22719535 0.44 AT1G61570.1
TIM13
translocase of the inner mitochondrial membrane 13
arTal_v1_Chr1_+_27338034_27338062 0.43 AT1G72600.2
AT1G72600.1
AT1G72600
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr5_+_657675_657786 0.43 AT5G02870.1
AT5G02870.2
AT5G02870
Ribosomal protein L4/L1 family
arTal_v1_Chr2_+_19529743_19529743 0.43 AT2G47610.1
AT2G47610
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
arTal_v1_Chr1_+_9996713_9996713 0.43 AT1G28440.1
HSL1
HAESA-like 1
arTal_v1_Chr1_-_12224000_12224108 0.43 AT1G33720.5
AT1G33720.1
AT1G33720.3
AT1G33720.2
AT1G33720.4
CYP76C6
cytochrome P450, family 76, subfamily C, polypeptide 6
arTal_v1_Chr3_-_7457393_7457404 0.43 AT3G21240.2
AT3G21240.1
AT3G21240.3
4CL2
4-coumarate:CoA ligase 2
arTal_v1_Chr5_-_15011257_15011257 0.43 AT5G37790.1
AT5G37790
Protein kinase superfamily protein
arTal_v1_Chr1_-_15607966_15607966 0.42 AT1G41830.1
SKS6
SKU5-similar 6
arTal_v1_Chr2_+_9592956_9592956 0.42 AT2G22590.1
AT2G22590
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr3_+_7275645_7275706 0.41 AT3G20810.1
AT3G20810.4
AT3G20810.2
AT3G20810.5
AT3G20810.3
JMJD5
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr5_-_7652714_7652714 0.41 AT5G22880.1
HTB2
histone B2
arTal_v1_Chr2_+_13940187_13940187 0.41 AT2G32860.2
AT2G32860.1
BGLU33
beta glucosidase 33
arTal_v1_Chr5_-_1013678_1013678 0.41 AT5G03800.1
EMB175
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr5_-_15770456_15770456 0.41 AT5G39410.1
AT5G39410
Saccharopine dehydrogenase
arTal_v1_Chr1_+_6886669_6886669 0.41 AT1G19850.1
MP
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
arTal_v1_Chr1_+_6886867_6886867 0.41 AT1G19850.2
MP
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
arTal_v1_Chr5_+_5141035_5141035 0.41 AT5G15750.1
AT5G15750
Alpha-L RNA-binding motif/Ribosomal protein S4 family protein
arTal_v1_Chr1_-_9890875_9891015 0.40 AT1G28290.2
AT1G28290.1
AGP31
arabinogalactan protein 31
arTal_v1_Chr1_-_21338756_21338871 0.40 AT1G57610.3
AT1G57610.4
AT1G57610
calcium uniporter (DUF607)
arTal_v1_Chr2_-_16856771_16856771 0.40 AT2G40360.2
AT2G40360.1
AT2G40360
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr5_-_5609589_5609589 0.40 AT5G17050.1
UGT78D2
UDP-glucosyl transferase 78D2
arTal_v1_Chr3_+_10338148_10338148 0.39 AT3G27880.1
AT3G27880
hypothetical protein (DUF1645)
arTal_v1_Chr5_-_18679191_18679191 0.39 AT5G46050.1
PTR3
peptide transporter 3
arTal_v1_Chr2_-_784880_784944 0.39 AT2G02780.3
AT2G02780.1
AT2G02780.2
AT2G02780
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr1_-_21339034_21339034 0.38 AT1G57610.1
AT1G57610.2
AT1G57610
calcium uniporter (DUF607)
arTal_v1_Chr3_-_7434743_7434743 0.38 AT3G21190.1
MSR1
O-fucosyltransferase family protein
arTal_v1_Chr5_-_8406132_8406151 0.38 AT5G24570.1
AT5G24575.1
AT5G24570
AT5G24575
hypothetical protein
hypothetical protein
arTal_v1_Chr5_+_8863224_8863224 0.38 AT5G25460.1
DGR2
transmembrane protein, putative (Protein of unknown function, DUF642)
arTal_v1_Chr1_+_23046768_23046768 0.38 AT1G62330.1
AT1G62330
O-fucosyltransferase family protein
arTal_v1_Chr5_+_25451800_25451875 0.38 AT5G63570.1
AT5G63570.2
GSA1
glutamate-1-semialdehyde-2,1-aminomutase
arTal_v1_Chr5_-_16490101_16490101 0.37 AT5G41190.1
AT5G41190
RNA-binding NOB1-like protein
arTal_v1_Chr4_-_14776247_14776247 0.37 AT4G30190.1
HA2
H[+]-ATPase 2
arTal_v1_Chr3_+_9154508_9154508 0.37 AT3G25140.1
QUA1
Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr4_-_14776058_14776058 0.37 AT4G30190.2
HA2
H[+]-ATPase 2
arTal_v1_Chr1_-_9316880_9316880 0.37 AT1G26880.1
AT1G26880
Ribosomal protein L34e superfamily protein
arTal_v1_Chr3_+_8603212_8603212 0.36 AT3G23820.1
GAE6
UDP-D-glucuronate 4-epimerase 6
arTal_v1_Chr3_+_5535124_5535124 0.36 AT3G16330.1
AT3G16330
Avr9/Cf-9 rapidly elicited protein
arTal_v1_Chr1_-_30142697_30142697 0.36 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_+_15742543_15742543 0.36 AT5G39320.1
UDG4
UDP-glucose 6-dehydrogenase family protein
arTal_v1_Chr5_-_14213293_14213293 0.36 AT5G36140.1
CYP716A2
cytochrome P450, family 716, subfamily A, polypeptide 2
arTal_v1_Chr5_+_17951442_17951449 0.36 AT5G44565.2
AT5G44565.1
AT5G44565.3
AT5G44565
transmembrane protein
arTal_v1_Chr1_+_5648636_5648636 0.36 AT1G16520.1
AT1G16520
interactor of constitutive active ROPs protein
arTal_v1_Chr1_-_638681_638681 0.35 AT1G02870.1
AT1G02870
nucleolar-like protein
arTal_v1_Chr4_-_11023736_11023851 0.35 AT4G20440.4
AT4G20440.5
AT4G20440.3
AT4G20440.2
AT4G20440.1
smB
small nuclear ribonucleoprotein associated protein B
arTal_v1_Chr1_-_13280380_13280387 0.35 AT1G35780.2
AT1G35780.1
AT1G35780
N-lysine methyltransferase
arTal_v1_Chr1_-_1108725_1108725 0.35 AT1G04190.1
TPR3
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_+_1198303_1198303 0.35 AT1G04430.3
AT1G04430.2
AT1G04430
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr5_-_25866972_25867025 0.35 AT5G64700.2
AT5G64700.1
UMAMIT21
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr4_+_11306945_11306945 0.35 AT4G21210.2
AT4G21210.1
RP1
PPDK regulatory protein
arTal_v1_Chr1_-_3880391_3880391 0.35 AT1G11545.1
XTH8
xyloglucan endotransglucosylase/hydrolase 8
arTal_v1_Chr1_-_8501542_8501542 0.35 AT1G24020.1
MLP423
MLP-like protein 423
arTal_v1_Chr2_-_521707_521737 0.35 AT2G02080.4
AT2G02080.2
AT2G02080.5
AT2G02080.6
AT2G02080.3
AT2G02080.1
IDD4
indeterminate(ID)-domain 4
arTal_v1_Chr5_-_20870848_20870848 0.35 AT5G51350.1
MOL1
Leucine-rich repeat transmembrane protein kinase family protein
arTal_v1_Chr1_-_9318277_9318277 0.34 AT1G26880.2
AT1G26880
Ribosomal protein L34e superfamily protein
arTal_v1_Chr5_-_5862462_5862475 0.34 AT5G17760.2
AT5G17760.1
AT5G17760
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr1_-_29965758_29965795 0.34 AT1G79630.2
AT1G79630.1
AT1G79630.7
AT1G79630.5
AT1G79630.4
AT1G79630.8
AT1G79630.3
AT1G79630.6
AT1G79630
Protein phosphatase 2C family protein
arTal_v1_Chr3_+_2953693_2953737 0.34 AT3G09630.1
AT3G09630.2
AT3G09630
Ribosomal protein L4/L1 family
arTal_v1_Chr1_+_18701882_18701882 0.34 AT1G50480.1
THFS
10-formyltetrahydrofolate synthetase
arTal_v1_Chr5_-_5833989_5834000 0.34 AT5G17700.2
AT5G17700.1
AT5G17700.3
AT5G17700
MATE efflux family protein
arTal_v1_Chr5_-_25398282_25398282 0.34 AT5G63410.1
AT5G63410
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr1_+_25018077_25018173 0.34 AT1G67035.2
AT1G67035.1
AT1G67035
homeobox Hox-B3-like protein
arTal_v1_Chr3_+_9066601_9066793 0.34 AT3G24840.2
AT3G24840.3
AT3G24840.1
AT3G24840.5
AT3G24840.4
AT3G24840.6
AT3G24840.7
AT3G24840
Sec14p-like phosphatidylinositol transfer family protein
arTal_v1_Chr5_-_6805195_6805226 0.34 AT5G20160.2
AT5G20160.3
AT5G20160.1
AT5G20160
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
arTal_v1_Chr3_+_5008676_5008742 0.34 AT3G14890.1
AT3G14890.2
AT3G14890
phosphoesterase
arTal_v1_Chr4_-_10464238_10464306 0.33 AT4G19120.3
AT4G19120.1
ERD3
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr3_+_18249663_18249727 0.33 AT3G49220.2
AT3G49220.3
AT3G49220.1
AT3G49220
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr1_-_6155796_6155804 0.33 AT1G17890.2
AT1G17890.1
AT1G17890.3
GER2
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr2_+_8940833_8940833 0.33 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
arTal_v1_Chr3_-_4970274_4970274 0.33 AT3G14800.2
AT3G14800

arTal_v1_Chr4_-_2495863_2495863 0.33 AT4G04910.1
NSF
AAA-type ATPase family protein
arTal_v1_Chr5_-_740319_740319 0.33 AT5G03140.1
AT5G03140
Concanavalin A-like lectin protein kinase family protein
arTal_v1_Chr5_+_14681348_14681348 0.33 AT5G37130.1
AT5G37130
Protein prenylyltransferase superfamily protein
arTal_v1_Chr3_-_20048190_20048190 0.33 AT3G54140.2
PTR1
peptide transporter 1
arTal_v1_Chr4_-_11965684_11965769 0.33 AT4G22770.2
AT4G22770.1
AT4G22770
AT hook motif DNA-binding family protein
arTal_v1_Chr1_-_19144320_19144320 0.33 AT1G51630.1
MSR2
O-fucosyltransferase family protein
arTal_v1_Chr1_-_8266048_8266048 0.33 AT1G23300.1
AT1G23300
MATE efflux family protein
arTal_v1_Chr4_+_1258532_1258532 0.33 AT4G02820.1
AT4G02820
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr2_+_7200807_7200807 0.32 AT2G16600.2
ROC3
rotamase CYP 3
arTal_v1_Chr1_-_8502065_8502065 0.32 AT1G24020.2
MLP423
MLP-like protein 423
arTal_v1_Chr1_+_4105223_4105223 0.32 AT1G12110.1
NRT1.1
nitrate transporter 1.1
arTal_v1_Chr4_+_1573266_1573266 0.32 AT4G03550.1
GSL05
glucan synthase-like 5
arTal_v1_Chr4_+_16881336_16881362 0.32 AT4G35560.1
AT4G35560.2
DAW1
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_+_9355827_9355827 0.32 AT1G26960.1
AtHB23
homeobox protein 23
arTal_v1_Chr2_-_18821889_18821889 0.32 AT2G45680.1
TCP9
TCP family transcription factor
arTal_v1_Chr1_-_26501652_26501652 0.32 AT1G70320.1
UPL2
ubiquitin-protein ligase 2
arTal_v1_Chr4_+_18466519_18466519 0.32 AT4G39795.1
AT4G39795
hypothetical protein (DUF581)
arTal_v1_Chr2_+_13580371_13580371 0.32 AT2G31940.1
AT2G31940
oxidoreductase/transition metal ion-binding protein
arTal_v1_Chr1_-_22794714_22794714 0.32 AT1G61730.1
AT1G61730
DNA-binding storekeeper protein-related transcriptional regulator
arTal_v1_Chr3_-_2656297_2656297 0.32 AT3G08740.1
AT3G08740
elongation factor P (EF-P) family protein
arTal_v1_Chr3_-_20048745_20048745 0.32 AT3G54140.1
PTR1
peptide transporter 1
arTal_v1_Chr2_+_15501726_15501726 0.32 AT2G36910.1
ABCB1
ATP binding cassette subfamily B1
arTal_v1_Chr5_-_6184038_6184038 0.32 AT5G18600.1
AT5G18600
Thioredoxin superfamily protein
arTal_v1_Chr4_-_15447042_15447042 0.32 AT4G31920.1
RR10
response regulator 10
arTal_v1_Chr4_+_14491622_14491622 0.31 AT4G29510.1
PRMT11
arginine methyltransferase 11
arTal_v1_Chr1_-_13279682_13279682 0.31 AT1G35780.4
AT1G35780
N-lysine methyltransferase
arTal_v1_Chr4_+_18209399_18209399 0.31 AT4G39080.1
VHA-A3
vacuolar proton ATPase A3
arTal_v1_Chr1_+_18724190_18724190 0.31 AT1G50560.1
CYP705A25
cytochrome P450, family 705, subfamily A, polypeptide 25
arTal_v1_Chr2_+_7200423_7200423 0.31 AT2G16600.1
ROC3
rotamase CYP 3
arTal_v1_Chr4_+_881061_881061 0.31 AT4G02010.1
AT4G02010
Protein kinase superfamily protein
arTal_v1_Chr1_+_1197956_1197956 0.31 AT1G04430.1
AT1G04430
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr3_+_9188096_9188181 0.31 AT3G25230.1
AT3G25230.2
ROF1
rotamase FKBP 1
arTal_v1_Chr4_+_17695496_17695496 0.31 AT4G37660.1
AT4G37660
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
arTal_v1_Chr3_-_8217080_8217206 0.31 AT3G23090.1
AT3G23090.2
AT3G23090.4
AT3G23090.3
AT3G23090
TPX2 (targeting protein for Xklp2) protein family
arTal_v1_Chr4_+_11917987_11917987 0.31 AT4G22670.1
HIP1
HSP70-interacting protein 1
arTal_v1_Chr1_-_5684909_5684909 0.31 AT1G16630.1
AT1G16630
transmembrane protein
arTal_v1_Chr3_-_20427384_20427384 0.31 AT3G55110.1
ABCG18
ABC-2 type transporter family protein
arTal_v1_Chr4_-_10585758_10585861 0.31 AT4G19410.1
AT4G19410.2
AT4G19410
Pectinacetylesterase family protein
arTal_v1_Chr2_+_9942915_9942915 0.31 AT2G23350.1
PAB4
poly(A) binding protein 4
arTal_v1_Chr5_-_20406731_20406731 0.30 AT5G50150.1
AT5G50150
NEP-interacting protein, putative (DUF239)
arTal_v1_Chr3_+_8648669_8648674 0.30 AT3G23940.1
AT3G23940.2
AT3G23940
dehydratase family
arTal_v1_Chr2_-_14902385_14902385 0.30 AT2G35430.1
AT2G35430
Zinc finger C-x8-C-x5-C-x3-H type family protein
arTal_v1_Chr5_+_19683809_19683809 0.30 AT5G48560.1
AT5G48560.2
AT5G48560
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr1_-_13279879_13279879 0.30 AT1G35780.3
AT1G35780
N-lysine methyltransferase
arTal_v1_Chr5_-_14253434_14253434 0.30 AT5G36210.1
AT5G36210
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr2_+_16869189_16869334 0.30 AT2G40400.1
AT2G40400.2
AT2G40400.3
AT2G40400
DUF399 family protein, putative (DUF399 and DUF3411)
arTal_v1_Chr5_+_15208358_15208358 0.30 AT5G38110.1
ASF1B
anti- silencing function 1b
arTal_v1_Chr4_-_14355201_14355201 0.30 AT4G29130.1
HXK1
hexokinase 1
arTal_v1_Chr3_-_4428192_4428199 0.30 AT3G13560.5
AT3G13560.4
AT3G13560.3
AT3G13560.2
AT3G13560.1
AT3G13560
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr2_-_18744322_18744322 0.30 AT2G45470.1
FLA8
FASCICLIN-like arabinogalactan protein 8
arTal_v1_Chr2_-_7130729_7130729 0.30 AT2G16440.1
MCM4
Minichromosome maintenance (MCM2/3/5) family protein
arTal_v1_Chr1_+_6602105_6602105 0.30 AT1G19110.1
AT1G19110
inter-alpha-trypsin inhibitor heavy chain-like protein
arTal_v1_Chr5_-_2985509_2985509 0.30 AT5G09620.2
AT5G09620
Octicosapeptide/Phox/Bem1p family protein
arTal_v1_Chr1_-_7840788_7840898 0.29 AT1G22200.2
AT1G22200.1
AT1G22200
Endoplasmic reticulum vesicle transporter protein
arTal_v1_Chr4_-_14020323_14020323 0.29 AT4G28320.1
MAN5
Glycosyl hydrolase superfamily protein
arTal_v1_Chr3_+_14751280_14751280 0.29 AT3G42660.1
AT3G42660
transducin family protein / WD-40 repeat family protein
arTal_v1_Chr2_+_14436589_14436589 0.29 AT2G34190.1
AT2G34190
Xanthine/uracil permease family protein
arTal_v1_Chr3_-_20223028_20223028 0.29 AT3G54630.1
AT3G54630
kinetochore protein
arTal_v1_Chr2_-_9056481_9056481 0.29 AT2G21130.1
AT2G21130
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
arTal_v1_Chr5_-_2985760_2985760 0.29 AT5G09620.1
AT5G09620
Octicosapeptide/Phox/Bem1p family protein
arTal_v1_Chr5_-_19287179_19287179 0.29 AT5G47550.1
AT5G47550
Cystatin/monellin superfamily protein
arTal_v1_Chr3_-_545602_545602 0.29 AT3G02570.1
MEE31
Mannose-6-phosphate isomerase, type I
arTal_v1_Chr3_-_3548877_3548877 0.29 AT3G11320.1
AT3G11320
Nucleotide-sugar transporter family protein
arTal_v1_Chr4_+_16819792_16819792 0.29 AT4G35380.1
AT4G35380.2
AT4G35380
SEC7-like guanine nucleotide exchange family protein
arTal_v1_Chr2_+_17490271_17490271 0.29 AT2G41900.1
OXS2
CCCH-type zinc finger protein with ARM repeat domain-containing protein
arTal_v1_Chr2_-_15481377_15481412 0.29 AT2G36880.2
AT2G36880.1
MAT3
methionine adenosyltransferase 3
arTal_v1_Chr2_-_9266393_9266393 0.29 AT2G21660.2
GRP7
cold, circadian rhythm, and rna binding 2
arTal_v1_Chr2_+_19096413_19096413 0.29 AT2G46520.1
AT2G46520
cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter
arTal_v1_Chr2_-_15667115_15667115 0.29 AT2G37310.1
AT2G37310
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr5_+_21700187_21700202 0.29 AT5G53460.1
AT5G53460.3
AT5G53460.2
GLT1
NADH-dependent glutamate synthase 1
arTal_v1_Chr1_+_8877790_8877790 0.29 AT1G25320.1
AT1G25320
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_+_23559474_23559474 0.28 AT5G58250.1
EMB3143
YCF54
arTal_v1_Chr5_-_18676883_18676883 0.28 AT5G46050.2
PTR3
peptide transporter 3
arTal_v1_Chr4_-_17267472_17267472 0.28 AT4G36610.1
AT4G36610
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr2_-_19287590_19287590 0.28 AT2G46940.1
AT2G46940
fold protein
arTal_v1_Chr4_-_16491054_16491054 0.28 AT4G34500.1
AT4G34500
Protein kinase superfamily protein
arTal_v1_Chr3_-_3346360_3346360 0.28 AT3G10690.1
GYRA
DNA GYRASE A
arTal_v1_Chr5_+_26926551_26926551 0.28 AT5G67470.1
FH6
formin homolog 6
arTal_v1_Chr5_+_14897329_14897410 0.28 AT5G37510.1
AT5G37510.2
EMB1467
NADH-ubiquinone dehydrogenase
arTal_v1_Chr4_-_10464001_10464001 0.28 AT4G19120.2
ERD3
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr3_+_1077236_1077289 0.28 AT3G04110.1
AT3G04110.2
AT3G04110.3
GLR1.1
glutamate receptor 1.1
arTal_v1_Chr3_+_6015184_6015184 0.28 AT3G17580.1
AT3G17580
SsrA-binding protein
arTal_v1_Chr5_-_103770_103770 0.28 AT5G01250.1
AT5G01250
alpha 1,4-glycosyltransferase family protein
arTal_v1_Chr5_-_18010542_18010667 0.28 AT5G44635.2
AT5G44635.1
MCM6
minichromosome maintenance (MCM2/3/5) family protein
arTal_v1_Chr3_-_21402899_21402940 0.28 AT3G57780.5
AT3G57780.4
AT3G57780.3
AT3G57780
nucleolar-like protein
arTal_v1_Chr3_+_19450506_19450506 0.28 AT3G52470.1
AT3G52470
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr3_-_8589754_8589754 0.28 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
arTal_v1_Chr2_-_9266557_9266557 0.27 AT2G21660.1
GRP7
cold, circadian rhythm, and rna binding 2
arTal_v1_Chr5_-_17721606_17721606 0.27 AT5G44040.1
AT5G44040
eisosome SEG2-like protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G46768

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.2 GO:0072708 response to sorbitol(GO:0072708)
0.2 0.6 GO:0033967 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.2 0.4 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.2 0.5 GO:0010203 response to very low fluence red light stimulus(GO:0010203)
0.1 0.6 GO:0010507 negative regulation of autophagy(GO:0010507)
0.1 0.4 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.1 0.2 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
0.1 0.7 GO:0097502 mannosylation(GO:0097502)
0.1 0.3 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.1 0.3 GO:0019320 hexose catabolic process(GO:0019320)
0.1 0.2 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.1 3.2 GO:0006012 galactose metabolic process(GO:0006012)
0.1 0.3 GO:0006056 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506) response to cobalt ion(GO:0032025)
0.1 1.1 GO:0010044 response to aluminum ion(GO:0010044)
0.1 0.4 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 0.5 GO:0034766 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.1 1.6 GO:1902074 response to salt(GO:1902074)
0.1 0.6 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.1 0.4 GO:0030203 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.1 0.4 GO:0010080 regulation of floral meristem growth(GO:0010080)
0.1 0.4 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.1 0.3 GO:0035494 SNARE complex disassembly(GO:0035494)
0.1 0.2 GO:0006148 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.1 0.6 GO:1902969 mitotic DNA replication(GO:1902969)
0.1 0.8 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 0.2 GO:0042353 fucose biosynthetic process(GO:0042353)
0.1 0.5 GO:0043478 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 0.3 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.1 0.2 GO:0042539 hypotonic salinity response(GO:0042539)
0.1 0.8 GO:0070370 cellular heat acclimation(GO:0070370)
0.1 0.2 GO:0043181 vacuolar sequestering(GO:0043181)
0.1 0.3 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.1 0.3 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.1 0.4 GO:0043290 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.5 GO:0006821 chloride transport(GO:0006821)
0.1 0.3 GO:0050992 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.1 0.2 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.1 0.2 GO:0050000 chromosome localization(GO:0050000) protein heterooligomerization(GO:0051291) protein localization to nuclear envelope(GO:0090435)
0.1 0.2 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.1 0.2 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 0.3 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.1 0.3 GO:0007142 male meiosis II(GO:0007142)
0.1 0.5 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.1 0.7 GO:0006482 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.1 0.1 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.2 GO:0042891 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.1 0.2 GO:0002188 translation reinitiation(GO:0002188)
0.0 0.5 GO:0010315 auxin efflux(GO:0010315)
0.0 0.3 GO:0080117 secondary growth(GO:0080117)
0.0 0.2 GO:1901535 regulation of DNA demethylation(GO:1901535)
0.0 0.2 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.3 GO:0010067 procambium histogenesis(GO:0010067)
0.0 0.2 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.0 0.1 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.0 0.6 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.0 0.6 GO:0071329 cellular response to sucrose stimulus(GO:0071329)
0.0 0.2 GO:0048479 style development(GO:0048479) stigma development(GO:0048480)
0.0 0.1 GO:0007000 nucleolus organization(GO:0007000)
0.0 0.1 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.0 0.2 GO:0015940 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.0 0.1 GO:0034247 snoRNA splicing(GO:0034247)
0.0 0.2 GO:0006567 threonine catabolic process(GO:0006567)
0.0 0.6 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.2 GO:0043090 amino acid import(GO:0043090)
0.0 0.1 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.0 0.1 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.0 1.0 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.3 GO:0017157 regulation of exocytosis(GO:0017157)
0.0 0.2 GO:0035335 peptidyl-tyrosine dephosphorylation(GO:0035335)
0.0 0.2 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.2 GO:0015846 polyamine transport(GO:0015846)
0.0 0.2 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.0 0.2 GO:0006624 vacuolar protein processing(GO:0006624)
0.0 0.5 GO:0006826 iron ion transport(GO:0006826)
0.0 0.2 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.4 GO:0046501 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.0 0.3 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.0 0.2 GO:0009819 drought recovery(GO:0009819)
0.0 0.2 GO:0045910 negative regulation of DNA recombination(GO:0045910)
0.0 0.8 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.4 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 0.1 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.0 0.3 GO:0080113 regulation of seed growth(GO:0080113)
0.0 0.1 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.0 0.1 GO:0071323 cellular response to chitin(GO:0071323)
0.0 0.5 GO:0009593 detection of chemical stimulus(GO:0009593)
0.0 0.1 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.0 0.2 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.0 0.4 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.0 0.1 GO:0034635 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.0 0.3 GO:0006265 DNA topological change(GO:0006265)
0.0 0.6 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.8 GO:0000470 maturation of LSU-rRNA(GO:0000470)
0.0 0.4 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.1 GO:0033259 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.0 0.2 GO:0043101 purine nucleotide salvage(GO:0032261) purine-containing compound salvage(GO:0043101)
0.0 0.4 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.0 0.2 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.2 GO:0009231 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.0 0.2 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.0 0.1 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.0 0.3 GO:0080156 mitochondrial mRNA modification(GO:0080156)
0.0 0.7 GO:0010286 heat acclimation(GO:0010286)
0.0 0.1 GO:0007098 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
0.0 0.4 GO:0009226 nucleotide-sugar biosynthetic process(GO:0009226)
0.0 0.1 GO:0042219 cellular modified amino acid catabolic process(GO:0042219)
0.0 0.2 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.0 0.1 GO:0071277 cellular response to calcium ion(GO:0071277)
0.0 0.0 GO:0042787 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.0 0.7 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.0 0.2 GO:0050821 protein stabilization(GO:0050821)
0.0 0.1 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.0 0.1 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.0 GO:0010198 synergid death(GO:0010198)
0.0 0.7 GO:0006997 nucleus organization(GO:0006997)
0.0 0.4 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.0 0.0 GO:0019401 alditol biosynthetic process(GO:0019401)
0.0 0.2 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.0 0.3 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.2 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.0 0.3 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.0 0.1 GO:0006513 protein monoubiquitination(GO:0006513)
0.0 0.1 GO:0031330 mitotic spindle assembly checkpoint(GO:0007094) negative regulation of cellular catabolic process(GO:0031330) spindle checkpoint(GO:0031577) negative regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032435) negative regulation of sister chromatid segregation(GO:0033046) negative regulation of mitotic sister chromatid segregation(GO:0033048) negative regulation of mitotic metaphase/anaphase transition(GO:0045841) negative regulation of chromosome segregation(GO:0051985) spindle assembly checkpoint(GO:0071173) mitotic spindle checkpoint(GO:0071174) negative regulation of proteasomal protein catabolic process(GO:1901799) negative regulation of metaphase/anaphase transition of cell cycle(GO:1902100) negative regulation of proteolysis involved in cellular protein catabolic process(GO:1903051) negative regulation of cellular protein catabolic process(GO:1903363) negative regulation of mitotic sister chromatid separation(GO:2000816)
0.0 0.1 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.4 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.1 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.1 GO:0010047 fruit dehiscence(GO:0010047)
0.0 0.4 GO:0010091 trichome branching(GO:0010091)
0.0 0.3 GO:0042773 ATP synthesis coupled electron transport(GO:0042773)
0.0 0.2 GO:0009612 response to mechanical stimulus(GO:0009612)
0.0 0.5 GO:0019758 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.0 0.3 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.4 GO:0035304 regulation of protein dephosphorylation(GO:0035304)
0.0 0.2 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.2 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.0 0.6 GO:0006897 endocytosis(GO:0006897)
0.0 0.3 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.6 GO:0006612 protein targeting to membrane(GO:0006612)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0034457 Mpp10 complex(GO:0034457)
0.1 0.4 GO:0010330 cellulose synthase complex(GO:0010330)
0.1 0.7 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.1 0.9 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.1 0.2 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.1 0.3 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.1 0.3 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.1 0.4 GO:0005687 U4 snRNP(GO:0005687)
0.1 0.5 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.1 0.6 GO:0042555 MCM complex(GO:0042555)
0.1 0.2 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.0 0.1 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.1 GO:1990752 microtubule end(GO:1990752)
0.0 2.1 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.1 GO:0031357 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.0 0.2 GO:0005845 mRNA cap binding complex(GO:0005845)
0.0 2.9 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.6 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.7 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.5 GO:0009986 cell surface(GO:0009986)
0.0 0.4 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.0 0.2 GO:0005828 kinetochore microtubule(GO:0005828)
0.0 0.1 GO:0000796 condensin complex(GO:0000796)
0.0 1.2 GO:0005795 Golgi stack(GO:0005795)
0.0 0.2 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.4 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.2 GO:0005844 polysome(GO:0005844)
0.0 0.1 GO:0005814 centrosome(GO:0005813) centriole(GO:0005814)
0.0 0.2 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.3 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.1 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.0 1.9 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.1 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.0 0.2 GO:0030125 clathrin vesicle coat(GO:0030125)
0.0 0.1 GO:1903561 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 1.9 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.1 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.0 0.4 GO:1902554 serine/threonine protein kinase complex(GO:1902554)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 3.2 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.2 0.6 GO:0036009 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.2 0.6 GO:0005078 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.1 0.4 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.1 2.2 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.5 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.1 0.5 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.1 0.3 GO:0008936 nicotinamidase activity(GO:0008936)
0.1 0.3 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.1 0.3 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.1 0.3 GO:0043140 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.1 0.3 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.1 0.4 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.1 0.3 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.1 0.4 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.4 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 0.3 GO:0045181 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.1 0.2 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.1 0.2 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.1 0.3 GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity(GO:0035242)
0.1 0.2 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.1 0.3 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.1 0.4 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.3 GO:0004001 adenosine kinase activity(GO:0004001)
0.1 0.3 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 0.9 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 0.4 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 0.3 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.1 0.2 GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity(GO:0003864)
0.1 0.4 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.1 0.2 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.1 0.4 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 0.2 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.1 0.5 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.0 0.2 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.2 GO:0008686 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.0 0.5 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.0 1.1 GO:0008143 poly(A) binding(GO:0008143)
0.0 0.4 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.0 1.6 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 0.3 GO:0080025 phosphatidylinositol-3,5-bisphosphate binding(GO:0080025)
0.0 0.1 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 0.3 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.0 0.6 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.1 GO:0051010 microtubule plus-end binding(GO:0051010)
0.0 0.2 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 0.5 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329) auxin transmembrane transporter activity(GO:0080161)
0.0 0.8 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 0.2 GO:0001671 ATPase activator activity(GO:0001671)
0.0 0.1 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.0 0.5 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 0.3 GO:0017022 myosin binding(GO:0017022)
0.0 0.2 GO:0016841 ammonia-lyase activity(GO:0016841)
0.0 0.2 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.0 0.6 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.2 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.5 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.3 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.2 GO:0016273 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.5 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.1 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.2 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.0 0.3 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 0.5 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.0 0.2 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.0 0.3 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.2 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.0 0.2 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.1 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.0 0.1 GO:0030371 translation repressor activity(GO:0030371)
0.0 0.7 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.7 GO:0031072 heat shock protein binding(GO:0031072)
0.0 0.2 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.6 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.1 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.0 0.2 GO:0043495 protein anchor(GO:0043495)
0.0 0.2 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.7 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.1 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.0 0.1 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.0 0.5 GO:0008810 cellulase activity(GO:0008810)
0.0 0.2 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.3 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.1 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.0 0.2 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.1 GO:0005536 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.0 0.3 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.2 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.0 0.2 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.1 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 0.1 GO:0030332 cyclin binding(GO:0030332)
0.0 0.1 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 0.1 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 0.2 GO:0019239 deaminase activity(GO:0019239)
0.0 0.1 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.0 0.1 GO:0035198 miRNA binding(GO:0035198)
0.0 0.3 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.2 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.0 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.0 0.0 GO:0010331 gibberellin binding(GO:0010331)
0.0 0.2 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.0 0.4 GO:0005267 potassium channel activity(GO:0005267)
0.0 0.1 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.0 0.2 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.2 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.4 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.0 0.2 GO:0008137 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.3 GO:0016776 phosphotransferase activity, phosphate group as acceptor(GO:0016776)
0.0 0.2 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.6 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.1 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 ST DIFFERENTIATION PATHWAY IN PC12 CELLS Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway.
0.1 0.3 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.0 0.3 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 0.2 PID AP1 PATHWAY AP-1 transcription factor network
0.0 0.3 PID CMYB PATHWAY C-MYB transcription factor network
0.0 0.1 PID P73PATHWAY p73 transcription factor network
0.0 0.2 PID ATR PATHWAY ATR signaling pathway
0.0 0.1 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 REACTOME FRS2 MEDIATED CASCADE Genes involved in FRS2-mediated cascade
0.1 0.3 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.1 0.3 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.6 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.4 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.0 0.2 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions
0.0 0.1 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.0 0.2 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.0 0.1 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.0 0.1 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.0 0.0 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism