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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G47655

Z-value: 0.70

Transcription factors associated with AT1G47655

Gene Symbol Gene ID Gene Info
AT1G47655
AT1G47655 Dof-type zinc finger DNA-binding family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT1G47655arTal_v1_Chr1_+_17525342_175253420.107.3e-01Click!

Activity profile of AT1G47655 motif

Sorted Z-values of AT1G47655 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr3_-_3420932_3420932 1.12 AT3G10930.1
AT3G10930
hypothetical protein
arTal_v1_Chr1_-_9649323_9649323 0.99 AT1G27730.1
STZ
salt tolerance zinc finger
arTal_v1_Chr5_-_216773_216773 0.94 AT5G01550.1
LECRKA4.2
lectin receptor kinase a4.1
arTal_v1_Chr5_+_4488476_4488476 0.90 AT5G13930.1
TT4
Chalcone and stilbene synthase family protein
arTal_v1_Chr3_+_18465318_18465318 0.75 AT3G49780.1
PSK4
phytosulfokine 4 precursor
arTal_v1_Chr5_+_18905258_18905272 0.71 AT5G46590.1
AT5G46590.2
NAC096
NAC domain containing protein 96
arTal_v1_Chr2_-_16359943_16359943 0.70 AT2G39200.1
MLO12
Seven transmembrane MLO family protein
arTal_v1_Chr5_-_18371021_18371021 0.69 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
arTal_v1_Chr1_-_1702749_1702749 0.68 AT1G05675.1
AT1G05675
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr5_-_8186662_8186704 0.68 AT5G24160.2
AT5G24160.1
SQE6
squalene monooxygenase 6
arTal_v1_Chr4_+_16810482_16810482 0.63 AT4G35350.2
AT4G35350.1
XCP1
xylem cysteine peptidase 1
arTal_v1_Chr5_-_23992908_23992908 0.63 AT5G59520.1
ZIP2
ZRT/IRT-like protein 2
arTal_v1_Chr3_+_5187082_5187082 0.62 AT3G15357.1
AT3G15357
phosphopantothenoylcysteine decarboxylase subunit
arTal_v1_Chr4_-_11585391_11585391 0.62 AT4G21830.2
MSRB7
methionine sulfoxide reductase B7
arTal_v1_Chr4_-_11585542_11585542 0.61 AT4G21830.1
MSRB7
methionine sulfoxide reductase B7
arTal_v1_Chr1_-_25065446_25065446 0.58 AT1G67110.1
AT1G67110.2
CYP735A2
cytochrome P450, family 735, subfamily A, polypeptide 2
arTal_v1_Chr1_-_3233109_3233259 0.54 AT1G09932.2
AT1G09932.4
AT1G09932.3
AT1G09932.1
AT1G09932
Phosphoglycerate mutase family protein
arTal_v1_Chr2_-_13609955_13609955 0.53 AT2G31980.1
CYS2
PHYTOCYSTATIN 2
arTal_v1_Chr5_-_8186100_8186100 0.52 AT5G24160.3
SQE6
squalene monooxygenase 6
arTal_v1_Chr3_-_20718866_20718866 0.50 AT3G55840.1
AT3G55840
Hs1pro-1 protein
arTal_v1_Chr5_+_15141650_15141700 0.50 AT5G38000.1
AT5G38000.2
AT5G38000.3
AT5G38000
Zinc-binding dehydrogenase family protein
arTal_v1_Chr5_-_8181107_8181107 0.48 AT5G24155.2
AT5G24155.3
AT5G24155.1
AT5G24155
FAD/NAD(P)-binding oxidoreductase family protein
arTal_v1_Chr5_-_4573137_4573243 0.46 AT5G14180.4
AT5G14180.2
MPL1
Myzus persicae-induced lipase 1
arTal_v1_Chr5_-_4574541_4574679 0.45 AT5G14180.3
AT5G14180.5
AT5G14180.1
MPL1
Myzus persicae-induced lipase 1
arTal_v1_Chr1_+_7696427_7696427 0.44 AT1G21910.1
DREB26
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr2_+_1568279_1568279 0.43 AT2G04500.1
AT2G04500
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr1_+_20604892_20604892 0.42 AT1G55240.1
AT1G55240
proteinase inhibitor I4, serpin (DUF716)
arTal_v1_Chr2_-_11754028_11754066 0.41 AT2G27500.2
AT2G27500.1
AT2G27500
Glycosyl hydrolase superfamily protein
arTal_v1_Chr5_+_5095652_5095652 0.41 AT5G15660.1
AT5G15660
F-box and associated interaction domains-containing protein
arTal_v1_Chr4_-_9393650_9393650 0.40 AT4G16690.1
MES16
methyl esterase 16
arTal_v1_Chr2_+_14003128_14003128 0.39 AT2G32990.1
GH9B8
glycosyl hydrolase 9B8
arTal_v1_Chr2_-_11753767_11753767 0.38 AT2G27500.3
AT2G27500
Glycosyl hydrolase superfamily protein
arTal_v1_Chr2_-_10124636_10124669 0.38 AT2G23780.1
AT2G23780.3
AT2G23780.2
AT2G23780
RING/U-box superfamily protein
arTal_v1_Chr1_-_2160818_2160818 0.37 AT1G07030.1
AT1G07030
Mitochondrial substrate carrier family protein
arTal_v1_Chr5_+_20820068_20820068 0.37 AT5G51210.1
OLEO3
oleosin3
arTal_v1_Chr3_-_12366047_12366047 0.37 AT3G30737.1
AT3G30737

arTal_v1_Chr5_-_1278102_1278102 0.37 AT5G04480.1
AT5G04480
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr4_-_1539987_1539987 0.36 AT4G03460.2
AT4G03460
Ankyrin repeat family protein
arTal_v1_Chr5_-_1277946_1277946 0.36 AT5G04480.2
AT5G04480
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr5_+_22594617_22594617 0.35 AT5G55830.1
AT5G55830
Concanavalin A-like lectin protein kinase family protein
arTal_v1_Chr2_-_7594195_7594195 0.35 AT2G17480.1
MLO8
Seven transmembrane MLO family protein
arTal_v1_Chr2_+_10072057_10072057 0.34 AT2G23690.1
AT2G23690
HTH-type transcriptional regulator
arTal_v1_Chr3_+_15993259_15993259 0.33 AT3G44320.1
NIT3
nitrilase 3
arTal_v1_Chr4_-_1540713_1540713 0.33 AT4G03460.1
AT4G03460
Ankyrin repeat family protein
arTal_v1_Chr4_+_18029196_18029198 0.33 AT4G38560.1
AT4G38560.2
AT4G38560
phospholipase-like protein (PEARLI 4) family protein
arTal_v1_Chr2_+_6880825_6880825 0.33 AT2G15800.1
AT2G15800

arTal_v1_Chr3_+_4988008_4988107 0.32 AT3G14840.2
AT3G14840.1
AT3G14840
Leucine-rich repeat transmembrane protein kinase
arTal_v1_Chr2_+_12594536_12594536 0.32 AT2G29330.1
TRI
tropinone reductase
arTal_v1_Chr1_-_20728091_20728093 0.31 AT1G55520.1
AT1G55520.3
AT1G55520.2
AT1G55520.4
TBP2
TATA binding protein 2
arTal_v1_Chr4_-_8175759_8175759 0.31 AT4G14165.1
AT4G14165
F-box family protein-like protein
arTal_v1_Chr4_+_7962428_7962430 0.31 AT4G13710.1
AT4G13710.2
AT4G13710
Pectin lyase-like superfamily protein
arTal_v1_Chr1_-_6342460_6342527 0.31 AT1G18410.1
AT1G18410.4
AT1G18410
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr3_-_892213_892229 0.31 AT3G03660.1
AT3G03660.3
AT3G03660.2
AT3G03660.4
WOX11
WUSCHEL related homeobox 11
arTal_v1_Chr4_+_17718118_17718128 0.31 AT4G37710.1
AT4G37710.2
AT4G37710
VQ motif-containing protein
arTal_v1_Chr5_-_17435405_17435405 0.30 AT5G43410.1
AT5G43410
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_-_6341257_6341274 0.30 AT1G18410.5
AT1G18410.3
AT1G18410
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr1_+_11188120_11188293 0.30 AT1G31290.2
AT1G31290.3
AT1G31290.1
AGO3
ARGONAUTE 3
arTal_v1_Chr1_-_8382290_8382290 0.30 AT1G23700.1
AT1G23700
Protein kinase superfamily protein
arTal_v1_Chr1_-_6341838_6341838 0.30 AT1G18410.2
AT1G18410
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr1_+_11607854_11607854 0.29 AT1G32220.1
AT1G32220
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_-_8381965_8382008 0.29 AT1G23700.3
AT1G23700.2
AT1G23700
Protein kinase superfamily protein
arTal_v1_Chr5_-_19404147_19404147 0.29 AT5G47920.1
AT5G47920
transcription elongation factor
arTal_v1_Chr5_+_1949315_1949315 0.29 AT5G06380.1
AT5G06380
hypothetical protein
arTal_v1_Chr4_+_6391854_6391854 0.29 AT4G10310.1
HKT1
high-affinity K+ transporter 1
arTal_v1_Chr1_+_22847247_22847247 0.29 AT1G61840.1
AT1G61840
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr2_+_17409370_17409370 0.28 AT2G41730.1
AT2G41730
calcium-binding site protein
arTal_v1_Chr1_+_7439171_7439171 0.28 AT1G21250.1
WAK1
cell wall-associated kinase
arTal_v1_Chr3_-_15355494_15355494 0.28 AT3G43430.1
AT3G43430
RING/U-box superfamily protein
arTal_v1_Chr5_-_22560461_22560541 0.28 AT5G55730.2
AT5G55730.1
FLA1
FASCICLIN-like arabinogalactan 1
arTal_v1_Chr4_+_9042897_9042897 0.28 AT4G15953.1
AT4G15953
maternally expressed family protein
arTal_v1_Chr1_+_9492849_9492849 0.27 AT1G27330.1
AT1G27330
Ribosome associated membrane protein RAMP4
arTal_v1_Chr3_+_10831162_10831162 0.27 AT3G28830.1
AT3G28830
mucin-like protein, putative (DUF1216)
arTal_v1_Chr1_-_2671825_2671957 0.27 AT1G08450.2
AT1G08450.3
AT1G08450.1
CRT3
calreticulin 3
arTal_v1_Chr2_-_10835483_10835483 0.27 AT2G25460.1
AT2G25460
EEIG1/EHBP1 protein amino-terminal domain protein
arTal_v1_Chr3_-_6313319_6313406 0.26 AT3G18380.3
AT3G18380.1
AT3G18380.2
SHH2
DNA-BINDING TRANSCRIPTION FACTOR 2
arTal_v1_Chr2_-_10835660_10835660 0.26 AT2G25460.2
AT2G25460
EEIG1/EHBP1 protein amino-terminal domain protein
arTal_v1_Chr2_-_9418711_9418711 0.26 AT2G22140.2
AT2G22140.1
EME1B
essential meiotic endonuclease 1B
arTal_v1_Chr4_-_1298500_1298500 0.26 AT4G02930.1
AT4G02930
GTP binding Elongation factor Tu family protein
arTal_v1_Chr5_-_4587427_4587448 0.26 AT5G14220.1
AT5G14220.5
AT5G14220.2
HEMG2
Flavin containing amine oxidoreductase family
arTal_v1_Chr5_-_4587653_4587653 0.26 AT5G14220.4
AT5G14220.3
HEMG2
Flavin containing amine oxidoreductase family
arTal_v1_Chr1_-_1307973_1307973 0.25 AT1G04680.1
AT1G04680
Pectin lyase-like superfamily protein
arTal_v1_Chr3_-_15098851_15098851 0.25 AT3G43123.1
AT3G43123

arTal_v1_Chr1_-_6293871_6293993 0.25 AT1G18270.4
AT1G18270.2
AT1G18270.3
AT1G18270.1
AT1G18270
ketose-bisphosphate aldolase class-II family protein
arTal_v1_Chr1_-_22641999_22641999 0.25 AT1G61360.4
AT1G61360.3
AT1G61360
S-locus lectin protein kinase family protein
arTal_v1_Chr5_+_19711738_19711738 0.25 AT5G48610.4
AT5G48610
myb-like protein X
arTal_v1_Chr4_-_6992555_6992555 0.25 AT4G11540.1
AT4G11540
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr3_+_7368267_7368267 0.25 AT3G21020.1
AT3G21020

arTal_v1_Chr3_+_21893812_21893812 0.25 AT3G59220.1
PRN
pirin
arTal_v1_Chr5_+_3542139_3542139 0.25 AT5G11130.1
AT5G11130
Exostosin family protein
arTal_v1_Chr2_+_19599948_19599948 0.24 AT2G47860.3
SETH6
Phototropic-responsive NPH3 family protein
arTal_v1_Chr2_+_4509242_4509242 0.24 AT2G11330.1
AT2G11330

arTal_v1_Chr1_-_8349786_8349786 0.24 AT1G23540.1
PERK12
Protein kinase superfamily protein
arTal_v1_Chr2_+_10391075_10391075 0.24 AT2G24440.1
AT2G24440
selenium binding protein
arTal_v1_Chr5_+_19712035_19712035 0.24 AT5G48610.5
AT5G48610
myb-like protein X
arTal_v1_Chr2_-_4645638_4645638 0.24 AT2G11600.1
AT2G11600

arTal_v1_Chr2_+_7782712_7782712 0.24 AT2G17920.1
AT2G17920
nucleic acid binding / zinc ion binding protein
arTal_v1_Chr1_-_22641111_22641111 0.24 AT1G61360.1
AT1G61360
S-locus lectin protein kinase family protein
arTal_v1_Chr5_+_15176231_15176231 0.24 AT5G38035.1
AT5G38035

arTal_v1_Chr2_+_15379660_15379660 0.23 AT2G36690.1
AT2G36690
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr2_+_13252076_13252217 0.23 AT2G31083.2
AT2G31083.1
CLE5
CLAVATA3/ESR-RELATED 5
arTal_v1_Chr1_-_359078_359078 0.23 AT1G02040.1
AT1G02040
C2H2-type zinc finger family protein
arTal_v1_Chr1_-_8350068_8350068 0.23 AT1G23540.2
PERK12
Protein kinase superfamily protein
arTal_v1_Chr5_+_25218634_25218663 0.23 AT5G62800.1
AT5G62800.2
AT5G62800
Protein with RING/U-box and TRAF-like domain
arTal_v1_Chr4_+_4972738_4972738 0.23 AT4G08090.1
AT4G08090

arTal_v1_Chr5_+_3524677_3524677 0.23 AT5G11090.1
AT5G11090
serine-rich protein-like protein
arTal_v1_Chr2_+_15379846_15379846 0.23 AT2G36690.2
AT2G36690
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr2_+_2369630_2369630 0.22 AT2G06080.1
AT2G06080

arTal_v1_Chr1_+_17212570_17212570 0.22 AT1G46192.1
AT1G46192

arTal_v1_Chr2_+_6484338_6484338 0.22 AT2G15010.1
AT2G15010
Plant thionin
arTal_v1_Chr1_-_22641825_22641825 0.22 AT1G61360.2
AT1G61360
S-locus lectin protein kinase family protein
arTal_v1_Chr1_+_5920757_5920757 0.22 AT1G17285.1
AT1G17285
transmembrane protein
arTal_v1_Chr2_+_2297816_2297816 0.22 AT2G05950.1
AT2G05950

arTal_v1_Chr5_-_17909507_17909507 0.22 AT5G44430.1
PDF1.2c
plant defensin 1.2C
arTal_v1_Chr5_-_24807898_24807920 0.22 AT5G61730.1
AT5G61730.2
ABCA9
ABC2 homolog 11
arTal_v1_Chr5_+_24035650_24035687 0.22 AT5G59660.2
AT5G59660.1
AT5G59660.3
AT5G59660
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr4_+_13236448_13236448 0.22 AT4G26120.1
AT4G26120
Ankyrin repeat family protein / BTB/POZ domain-containing protein
arTal_v1_Chr2_-_17419423_17419423 0.22 AT2G41745.1
AT2G41745

arTal_v1_Chr4_-_7523979_7523979 0.22 AT4G12810.1
AT4G12810
F-box family protein
arTal_v1_Chr3_-_2306615_2306615 0.22 AT3G07250.1
AT3G07250
RNA-binding (RRM-RBD-RNP motif) domain nuclear transport factor 2 family protein
arTal_v1_Chr2_-_3165509_3165509 0.22 AT2G07550.1
AT2G07550

arTal_v1_Chr4_-_16583075_16583075 0.21 AT4G34760.1
AT4G34760
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_-_22117018_22117018 0.21 AT1G60030.1
NAT7
nucleobase-ascorbate transporter 7
arTal_v1_Chr2_-_1462937_1462944 0.21 AT2G04240.2
AT2G04240.1
XERICO
RING/U-box superfamily protein
arTal_v1_Chr5_+_10050551_10050551 0.21 AT5G28053.1
AT5G28053

arTal_v1_Chr1_-_19398244_19398244 0.21 AT1G52120.1
AT1G52120
Mannose-binding lectin superfamily protein
arTal_v1_Chr1_-_19397975_19397975 0.21 AT1G52120.2
AT1G52120
Mannose-binding lectin superfamily protein
arTal_v1_Chr4_+_8883825_8883825 0.21 AT4G15560.1
CLA1
Deoxyxylulose-5-phosphate synthase
arTal_v1_Chr1_-_1043887_1043887 0.21 AT1G04040.1
AT1G04040
HAD superfamily, subfamily IIIB acid phosphatase
arTal_v1_Chr4_-_6520317_6520322 0.21 AT4G10550.4
AT4G10550.3
AT4G10550.2
AT4G10550
Subtilase family protein
arTal_v1_Chr5_+_6340076_6340076 0.21 AT5G18990.1
AT5G18990
Pectin lyase-like superfamily protein
arTal_v1_Chr1_-_22172685_22172685 0.21 AT1G60120.1
AT1G60120

arTal_v1_Chr1_-_7524721_7524721 0.21 AT1G21475.1
AT1G21475
hypothetical protein (DUF506)
arTal_v1_Chr5_+_24363933_24363933 0.21 AT5G60610.2
AT5G60610
F-box/RNI-like superfamily protein
arTal_v1_Chr5_+_19711541_19711541 0.20 AT5G48610.2
AT5G48610.3
AT5G48610.1
AT5G48610
myb-like protein X
arTal_v1_Chr2_+_3902798_3902798 0.20 AT2G10226.1
AT2G10226

arTal_v1_Chr1_+_5920542_5920542 0.20 AT1G17285.2
AT1G17285
transmembrane protein
arTal_v1_Chr3_-_1832190_1832190 0.20 AT3G06070.1
AT3G06070
hypothetical protein
arTal_v1_Chr5_-_5259924_5259924 0.20 AT5G16100.2
AT5G16100
RWP-RK domain protein
arTal_v1_Chr1_-_20983979_20984115 0.20 AT1G56100.1
AT1G56100.3
AT1G56100.2
AT1G56100
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr5_+_22474142_22474142 0.20 AT5G55480.1
SVL1
SHV3-like 1
arTal_v1_Chr1_+_3252098_3252098 0.20 AT1G09970.1
LRR XI-23
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr1_-_25100625_25100625 0.20 AT1G67130.1
AT1G67130
F-box family protein
arTal_v1_Chr1_+_3252317_3252317 0.20 AT1G09970.2
LRR XI-23
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr3_-_17700923_17700923 0.20 AT3G47960.1
GTR1
Major facilitator superfamily protein
arTal_v1_Chr4_+_4592806_4592806 0.20 AT4G07770.1
AT4G07770

arTal_v1_Chr2_+_1970709_1970709 0.20 AT2G05390.1
AT2G05390

arTal_v1_Chr5_+_20511642_20511667 0.20 AT5G50375.3
AT5G50375.1
AT5G50375.2
CPI1
cyclopropyl isomerase
arTal_v1_Chr1_-_19336072_19336135 0.20 AT1G52000.2
AT1G52000.1
AT1G52000
Mannose-binding lectin superfamily protein
arTal_v1_Chr3_+_11956458_11956533 0.20 AT3G30340.2
AT3G30340.1
UMAMIT32
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr1_-_18446772_18446772 0.19 AT1G49830.2
AT1G49830.1
AT1G49830
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr1_-_5155563_5155564 0.19 AT1G14940.1
AT1G14940.2
AT1G14940
Polyketide cyclase/dehydrase and lipid transport superfamily protein
arTal_v1_Chr1_-_19599402_19599402 0.19 AT1G52610.1
AT1G52610

arTal_v1_Chr3_-_1785495_1785495 0.19 AT3G05960.1
STP6
sugar transporter 6
arTal_v1_Chr1_+_6962030_6962127 0.19 AT1G20080.2
AT1G20080.3
AT1G20080.4
AT1G20080.1
AT1G20080.5
SYTB
Calcium-dependent lipid-binding (CaLB domain) family protein
arTal_v1_Chr1_+_23911024_23911024 0.19 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
arTal_v1_Chr1_-_23411139_23411139 0.19 AT1G63120.1
RBL2
RHOMBOID-like 2
arTal_v1_Chr5_-_17095801_17095801 0.19 AT5G42645.1
AT5G42645

arTal_v1_Chr2_+_10995095_10995095 0.19 AT2G25780.1
AT2G25780
hypothetical protein (DUF1677)
arTal_v1_Chr3_-_15853462_15853462 0.19 AT3G44093.1
AT3G44093

arTal_v1_Chr4_-_17656557_17656557 0.19 AT4G37570.1
AT4G37570

arTal_v1_Chr4_-_4214012_4214012 0.19 AT4G07415.1
AT4G07415

arTal_v1_Chr3_-_1338113_1338113 0.19 AT3G04855.1
AT3G04855
hypothetical protein
arTal_v1_Chr5_+_24357021_24357022 0.19 AT5G60590.3
AT5G60590.1
AT5G60590.2
AT5G60590
DHBP synthase RibB-like alpha/beta domain-containing protein
arTal_v1_Chr2_-_8352562_8352562 0.19 AT2G19240.2
AT2G19240.1
AT2G19240
Ypt/Rab-GAP domain of gyp1p superfamily protein
arTal_v1_Chr4_+_16925301_16925301 0.19 AT4G35710.1
AT4G35710
DUF241 domain protein, putative (DUF241)
arTal_v1_Chr2_-_7132803_7132803 0.19 AT2G16450.1
AT2G16450
F-box and associated interaction domains-containing protein
arTal_v1_Chr2_+_9572066_9572066 0.19 AT2G22520.1
AT2G22520.2
AT2G22520
hypothetical protein
arTal_v1_Chr3_+_14484419_14484419 0.19 AT3G42330.1
AT3G42330

arTal_v1_Chr5_-_5259719_5259719 0.19 AT5G16100.1
AT5G16100
RWP-RK domain protein
arTal_v1_Chr3_+_20386597_20386605 0.19 AT3G55010.1
AT3G55010.2
PUR5
phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)
arTal_v1_Chr5_-_7144272_7144272 0.18 AT5G21030.1
AT5G21030.2
AT5G21030
PAZ domain-containing protein / piwi domain-containing protein
arTal_v1_Chr1_-_24510742_24510742 0.18 AT1G65880.1
BZO1
benzoyloxyglucosinolate 1
arTal_v1_Chr5_+_24363591_24363591 0.18 AT5G60610.1
AT5G60610
F-box/RNI-like superfamily protein
arTal_v1_Chr2_+_6447381_6447381 0.18 AT2G14950.1
AT2G14950

arTal_v1_Chr1_+_9105038_9105090 0.18 AT1G26320.2
AT1G26320.1
AT1G26320
Zinc-binding dehydrogenase family protein
arTal_v1_Chr2_-_3561620_3561620 0.18 AT2G07791.1
AT2G07791

arTal_v1_Chr2_+_16123985_16123985 0.18 AT2G38510.1
AT2G38510
MATE efflux family protein
arTal_v1_Chr1_+_30138818_30138818 0.18 AT1G80120.1
AT1G80120
LURP-one-like protein (DUF567)
arTal_v1_Chr2_-_19249909_19249909 0.18 AT2G46840.1
DUF4
hypothetical protein (DOMAIN OF UNKNOWN FUNCTION 724 4)
arTal_v1_Chr1_+_26966766_26966766 0.18 AT1G71696.2
AT1G71696.1
SOL1
carboxypeptidase D
arTal_v1_Chr1_-_7800228_7800228 0.18 AT1G22100.1
AT1G22100
Inositol-pentakisphosphate 2-kinase family protein
arTal_v1_Chr4_-_6519859_6519859 0.18 AT4G10550.1
AT4G10550
Subtilase family protein
arTal_v1_Chr3_-_13428501_13428501 0.18 AT3G32902.1
AT3G32902

arTal_v1_Chr1_+_21861282_21861384 0.18 AT1G59520.4
AT1G59520.5
AT1G59520.2
AT1G59520.1
AT1G59520.6
AT1G59520.3
CW7
CW7
arTal_v1_Chr5_+_25908247_25908247 0.18 AT5G64810.1
WRKY51
WRKY DNA-binding protein 51
arTal_v1_Chr1_+_19879405_19879405 0.18 AT1G53300.1
TTL1
tetratricopetide-repeat thioredoxin-like 1
arTal_v1_Chr3_+_16368890_16368890 0.18 AT3G44830.1
AT3G44830
Lecithin:cholesterol acyltransferase family protein
arTal_v1_Chr3_+_13874589_13874589 0.18 AT3G33109.1
AT3G33109

arTal_v1_Chr4_+_13236253_13236253 0.18 AT4G26120.2
AT4G26120
Ankyrin repeat family protein / BTB/POZ domain-containing protein
arTal_v1_Chr4_+_14123489_14123489 0.18 AT4G28580.1
MGT5
magnesium transport 5
arTal_v1_Chr5_-_2384521_2384525 0.18 AT5G07530.2
AT5G07530.1
AT5G07530.3
GRP17
glycine rich protein 17
arTal_v1_Chr1_-_3296198_3296198 0.18 AT1G10090.1
AT1G10090
Early-responsive to dehydration stress protein (ERD4)
arTal_v1_Chr2_+_5694381_5694381 0.18 AT2G13680.1
CALS5
callose synthase 5
arTal_v1_Chr1_+_29549540_29549540 0.18 AT1G78570.1
RHM1
rhamnose biosynthesis 1
arTal_v1_Chr1_+_26612999_26612999 0.18 AT1G70580.3
AOAT2
alanine-2-oxoglutarate aminotransferase 2
arTal_v1_Chr2_-_12504912_12504944 0.18 AT2G29100.1
AT2G29100.2
GLR2.9
glutamate receptor 2.9
arTal_v1_Chr5_+_2530834_2530865 0.18 AT5G07930.3
AT5G07930.1
AT5G07930.2
MCT2
MEI2 C-terminal RRM only like 2
arTal_v1_Chr1_+_6846338_6846374 0.18 AT1G19800.1
AT1G19800.3
AT1G19800.4
AT1G19800.5
AT1G19800.6
AT1G19800.2
ABCI14
trigalactosyldiacylglycerol 1
arTal_v1_Chr3_+_1121950_1121950 0.18 AT3G04250.1
AT3G04250
F-box associated ubiquitination effector family protein
arTal_v1_Chr5_+_19155976_19156054 0.18 AT5G47160.1
AT5G47160.2
AT5G47160
YDG/SRA domain-containing protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G47655

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 GO:0035264 multicellular organism growth(GO:0035264)
0.1 1.4 GO:0000304 response to singlet oxygen(GO:0000304)
0.1 0.7 GO:0043290 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.5 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.1 0.6 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.1 0.3 GO:0052746 inositol phosphorylation(GO:0052746)
0.1 0.6 GO:0006597 spermine biosynthetic process(GO:0006597)
0.1 0.3 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.1 0.2 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.1 0.3 GO:1901004 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.1 0.3 GO:0070550 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.1 0.2 GO:0090207 regulation of triglyceride metabolic process(GO:0090207)
0.1 0.3 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.0 1.9 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.3 GO:0048830 adventitious root development(GO:0048830)
0.0 0.3 GO:0006522 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.0 0.9 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.0 0.1 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.0 0.3 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.0 0.2 GO:0051325 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.0 0.3 GO:0009061 anaerobic respiration(GO:0009061)
0.0 0.1 GO:1900544 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
0.0 0.1 GO:0006751 glutathione catabolic process(GO:0006751)
0.0 0.5 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.0 0.1 GO:0071280 cellular response to copper ion(GO:0071280) cellular response to ozone(GO:0071457)
0.0 0.2 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.0 0.6 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.1 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.0 0.1 GO:0046865 isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865)
0.0 0.6 GO:0002213 defense response to insect(GO:0002213)
0.0 1.0 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.0 0.5 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.0 0.2 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.0 0.6 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.5 GO:0019915 lipid storage(GO:0019915)
0.0 0.2 GO:0006450 regulation of translational fidelity(GO:0006450)
0.0 0.1 GO:0072337 modified amino acid transport(GO:0072337)
0.0 0.2 GO:0046084 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.0 0.2 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.0 0.5 GO:0050826 response to freezing(GO:0050826)
0.0 0.1 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.0 0.1 GO:0006272 leading strand elongation(GO:0006272) embryonic root morphogenesis(GO:0010086)
0.0 0.2 GO:0015914 phospholipid transport(GO:0015914)
0.0 0.1 GO:0035067 negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.0 0.2 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.0 0.1 GO:0032781 positive regulation of ATPase activity(GO:0032781)
0.0 0.1 GO:0000256 allantoin catabolic process(GO:0000256)
0.0 0.0 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.0 0.2 GO:0015693 magnesium ion transport(GO:0015693)
0.0 0.1 GO:0006446 regulation of translational initiation(GO:0006446)
0.0 0.2 GO:0052541 plant-type cell wall cellulose metabolic process(GO:0052541)
0.0 0.2 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.1 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.0 0.8 GO:0008037 cell recognition(GO:0008037) recognition of pollen(GO:0048544)
0.0 0.1 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.4 GO:0052542 defense response by callose deposition(GO:0052542)
0.0 0.1 GO:0080086 stamen filament development(GO:0080086)
0.0 0.0 GO:0000023 maltose metabolic process(GO:0000023)
0.0 0.1 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.0 0.3 GO:0008360 regulation of cell shape(GO:0008360)
0.0 1.0 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.2 GO:0080060 integument development(GO:0080060)
0.0 0.7 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.4 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 0.2 GO:0070505 pollen coat(GO:0070505)
0.0 0.8 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.3 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 0.1 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.0 0.4 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 0.3 GO:1902495 transmembrane transporter complex(GO:1902495)
0.0 1.4 GO:0005615 extracellular space(GO:0005615)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.7 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 0.7 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.5 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.1 1.2 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.1 0.6 GO:0016768 spermine synthase activity(GO:0016768)
0.1 0.9 GO:0004806 triglyceride lipase activity(GO:0004806)
0.1 0.2 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.1 0.2 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.1 0.2 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.1 0.2 GO:0010280 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.1 0.3 GO:0047958 glycine:2-oxoglutarate aminotransferase activity(GO:0047958)
0.1 0.7 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.1 0.3 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.1 0.2 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.0 0.4 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.1 GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725)
0.0 0.2 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 0.2 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.0 0.6 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 0.2 GO:0015245 fatty acid transporter activity(GO:0015245)
0.0 0.8 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.1 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.0 0.1 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.0 0.1 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.7 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.1 GO:0070042 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.0 0.1 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.0 0.2 GO:0008083 growth factor activity(GO:0008083)
0.0 0.6 GO:0008810 cellulase activity(GO:0008810)
0.0 0.3 GO:0017025 TBP-class protein binding(GO:0017025)
0.0 0.1 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.0 0.4 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.1 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.4 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 0.1 GO:0001671 ATPase activator activity(GO:0001671)
0.0 0.2 GO:0016872 intramolecular lyase activity(GO:0016872)
0.0 0.3 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.3 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.2 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.1 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 0.1 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.0 0.2 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.2 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.2 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.1 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.0 0.2 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.2 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.7 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.1 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.0 0.1 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.0 0.1 SA G1 AND S PHASES Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition.
0.0 0.2 PID E2F PATHWAY E2F transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE Genes involved in Synthesis of PIPs at the Golgi membrane
0.0 0.1 REACTOME NUCLEAR SIGNALING BY ERBB4 Genes involved in Nuclear signaling by ERBB4
0.0 0.2 REACTOME G1 PHASE Genes involved in G1 Phase
0.0 0.1 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.0 0.1 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.0 0.2 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis