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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G55110

Z-value: 1.10

Transcription factors associated with AT1G55110

Gene Symbol Gene ID Gene Info
AT1G55110
AT1G55110 indeterminate(ID)-domain 7

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
IDD7arTal_v1_Chr1_-_20563269_205632690.516.1e-02Click!

Activity profile of AT1G55110 motif

Sorted Z-values of AT1G55110 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_-_9275193_9275193 1.98 AT1G26790.1
AT1G26790
Dof-type zinc finger DNA-binding family protein
arTal_v1_Chr2_+_13381767_13381767 1.39 AT2G31380.1
STH
salt tolerance homologue
arTal_v1_Chr4_-_18472048_18472048 1.36 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
arTal_v1_Chr1_-_29459493_29459493 1.22 AT1G78290.2
AT1G78290.3
SNRK2-8
Protein kinase superfamily protein
arTal_v1_Chr2_+_1966806_1966816 1.18 AT2G05380.1
AT2G05380.2
GRP3S
glycine-rich protein 3 short isoform
arTal_v1_Chr2_+_1966610_1966610 1.16 AT2G05380.3
GRP3S
glycine-rich protein 3 short isoform
arTal_v1_Chr3_+_5720941_5721030 1.08 AT3G16800.5
AT3G16800.4
AT3G16800.2
AT3G16800.6
AT3G16800.1
AT3G16800
Protein phosphatase 2C family protein
arTal_v1_Chr2_+_12004658_12004700 1.07 AT2G28160.1
AT2G28160.2
FRU
FER-like regulator of iron uptake
arTal_v1_Chr2_+_10244745_10244745 1.04 AT2G24100.1
ASG1
ATP-dependent DNA helicase
arTal_v1_Chr3_-_5173001_5173105 0.98 AT3G15354.4
AT3G15354.1
AT3G15354.2
AT3G15354.3
SPA3
SPA1-related 3
arTal_v1_Chr4_-_12345652_12345652 0.97 AT4G23700.2
CHX17
cation/H+ exchanger 17
arTal_v1_Chr4_-_12346051_12346051 0.96 AT4G23700.1
CHX17
cation/H+ exchanger 17
arTal_v1_Chr1_-_28442429_28442435 0.96 AT1G75750.2
AT1G75750.1
GASA1
GAST1 protein homolog 1
arTal_v1_Chr1_-_28897120_28897120 0.92 AT1G76930.2
EXT4
extensin 4
arTal_v1_Chr3_-_4974521_4974534 0.91 AT3G14810.1
AT3G14810.2
MSL5
mechanosensitive channel of small conductance-like 5
arTal_v1_Chr1_-_28896883_28896883 0.91 AT1G76930.1
EXT4
extensin 4
arTal_v1_Chr3_-_23195917_23195917 0.90 AT3G62700.1
ABCC14
multidrug resistance-associated protein 10
arTal_v1_Chr1_+_26122080_26122080 0.90 AT1G69490.1
NAP
NAC-like, activated by AP3/PI
arTal_v1_Chr5_+_3347381_3347437 0.90 AT5G10580.3
AT5G10580.4
AT5G10580.1
AT5G10580.2
AT5G10580
plant/protein (Protein of unknown function, DUF599)
arTal_v1_Chr1_+_21868190_21868190 0.90 AT1G59530.1
bZIP4
basic leucine-zipper 4
arTal_v1_Chr5_+_8687188_8687188 0.89 AT5G25160.1
ZFP3
zinc finger protein 3
arTal_v1_Chr1_+_29354944_29354944 0.89 AT1G78070.1
AT1G78070
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr3_+_5721225_5721225 0.88 AT3G16800.3
AT3G16800
Protein phosphatase 2C family protein
arTal_v1_Chr3_-_19078955_19078955 0.88 AT3G51400.1
AT3G51400
hypothetical protein (DUF241)
arTal_v1_Chr5_+_21771811_21771811 0.87 AT5G53590.1
AT5G53590
SAUR-like auxin-responsive protein family
arTal_v1_Chr3_+_22635803_22635816 0.87 AT3G61160.3
AT3G61160.6
AT3G61160.5
AT3G61160.4
AT3G61160.2
AT3G61160.1
AT3G61160
Protein kinase superfamily protein
arTal_v1_Chr3_-_20629295_20629295 0.87 AT3G55610.1
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
arTal_v1_Chr4_-_9583290_9583290 0.87 AT4G17030.1
EXLB1
expansin-like B1
arTal_v1_Chr2_-_15599951_15599951 0.86 AT2G37130.2
AT2G37130
Peroxidase superfamily protein
arTal_v1_Chr3_-_10599042_10599042 0.86 AT3G28345.1
ABCB15
ABC transporter family protein
arTal_v1_Chr3_-_20629093_20629093 0.86 AT3G55610.2
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
arTal_v1_Chr5_-_20204595_20204595 0.86 AT5G49730.1
AT5G49730.2
FRO6
ferric reduction oxidase 6
arTal_v1_Chr2_-_15600154_15600154 0.85 AT2G37130.1
AT2G37130
Peroxidase superfamily protein
arTal_v1_Chr1_-_10164452_10164452 0.85 AT1G29090.1
AT1G29090
Cysteine proteinases superfamily protein
arTal_v1_Chr1_-_30142697_30142697 0.85 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_+_5705541_5705541 0.84 AT3G16770.1
EBP
ethylene-responsive element binding protein
arTal_v1_Chr1_-_23511997_23512088 0.84 AT1G63410.2
AT1G63410.1
AT1G63410.3
AT1G63410
LURP-one-like protein (DUF567)
arTal_v1_Chr5_-_23117403_23117686 0.83 AT5G57110.3
AT5G57110.1
AT5G57110.2
ACA8
autoinhibited Ca2+ -ATPase, isoform 8
arTal_v1_Chr1_+_10477885_10477885 0.83 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
arTal_v1_Chr1_-_8414886_8414886 0.82 AT1G23800.1
AT1G23800.2
ALDH2B7
aldehyde dehydrogenase 2B7
arTal_v1_Chr2_-_827994_827994 0.82 AT2G02850.1
ARPN
plantacyanin
arTal_v1_Chr3_+_9475350_9475412 0.81 AT3G25890.2
AT3G25890.1
CRF11
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_+_29356346_29356382 0.81 AT1G78070.2
AT1G78070.3
AT1G78070
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr5_+_23701392_23701392 0.80 AT5G58660.1
AT5G58660.2
AT5G58660
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr2_+_12706627_12706627 0.74 AT2G29740.1
UGT71C2
UDP-glucosyl transferase 71C2
arTal_v1_Chr1_-_1286619_1286619 0.74 AT1G04620.1
HCAR
coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family
arTal_v1_Chr1_-_28117405_28117422 0.73 AT1G74840.2
AT1G74840.1
AT1G74840
Homeodomain-like superfamily protein
arTal_v1_Chr5_-_17337884_17337884 0.73 AT5G43180.1
AT5G43180
transmembrane protein, putative (Protein of unknown function, DUF599)
arTal_v1_Chr1_-_3481041_3481041 0.71 AT1G10550.1
XTH33
xyloglucan:xyloglucosyl transferase 33
arTal_v1_Chr3_+_2176788_2176788 0.71 AT3G06890.1
AT3G06890
transmembrane protein
arTal_v1_Chr1_-_4243201_4243229 0.71 AT1G12440.1
AT1G12440.3
AT1G12440
A20/AN1-like zinc finger family protein
arTal_v1_Chr1_-_4242963_4242963 0.70 AT1G12440.2
AT1G12440
A20/AN1-like zinc finger family protein
arTal_v1_Chr1_+_21652988_21652988 0.69 AT1G58340.1
ZF14
MATE efflux family protein
arTal_v1_Chr5_+_2657054_2657054 0.68 AT5G08260.1
scpl35
serine carboxypeptidase-like 35
arTal_v1_Chr1_+_25437900_25437914 0.68 AT1G67850.1
AT1G67850.4
AT1G67850.5
AT1G67850.3
AT1G67850.2
AT1G67850
lysine ketoglutarate reductase trans-splicing protein (DUF707)
arTal_v1_Chr1_-_22871298_22871358 0.67 AT1G61890.3
AT1G61890.1
AT1G61890.2
AT1G61890
MATE efflux family protein
arTal_v1_Chr5_+_22388782_22388782 0.67 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr3_-_1939853_1939853 0.67 AT3G06390.1
AT3G06390
Uncharacterized protein family (UPF0497)
arTal_v1_Chr5_-_25866972_25867025 0.67 AT5G64700.2
AT5G64700.1
UMAMIT21
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr1_+_21936278_21936278 0.66 AT1G59700.1
GSTU16
glutathione S-transferase TAU 16
arTal_v1_Chr5_-_10070899_10070899 0.66 AT5G28060.1
AT5G28060
Ribosomal protein S24e family protein
arTal_v1_Chr1_-_156178_156178 0.66 AT1G01420.2
UGT72B3
UDP-glucosyl transferase 72B3
arTal_v1_Chr1_-_156011_156011 0.66 AT1G01420.1
UGT72B3
UDP-glucosyl transferase 72B3
arTal_v1_Chr5_+_22388521_22388521 0.65 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr1_-_8688246_8688247 0.65 AT1G24510.1
AT1G24510.2
AT1G24510.3
AT1G24510
TCP-1/cpn60 chaperonin family protein
arTal_v1_Chr4_+_8646150_8646150 0.64 AT4G15160.2
AT4G15160.1
AT4G15160
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr4_+_12649985_12649987 0.64 AT4G24480.2
AT4G24480.1
AT4G24480.3
AT4G24480
Protein kinase superfamily protein
arTal_v1_Chr2_+_13580371_13580371 0.64 AT2G31940.1
AT2G31940
oxidoreductase/transition metal ion-binding protein
arTal_v1_Chr4_+_14004401_14004485 0.64 AT4G28260.1
AT4G28260.2
AT4G28260
acyl-UDP-N-acetylglucosamine O-acyltransferase
arTal_v1_Chr5_-_7973995_7973995 0.64 AT5G23660.1
SWEET12
bidirectional sugar transporter SWEET12-like protein
arTal_v1_Chr1_-_28466971_28466971 0.64 AT1G75820.1
CLV1
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr3_-_7808046_7808046 0.64 AT3G22142.1
AT3G22142
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr1_+_17847042_17847042 0.64 AT1G48300.1
DGAT3
diacylglycerol acyltransferase
arTal_v1_Chr1_+_21043348_21043348 0.64 AT1G56220.2
AT1G56220.1
AT1G56220
Dormancy/auxin associated family protein
arTal_v1_Chr5_+_2167468_2167536 0.64 AT5G06980.4
AT5G06980.3
AT5G06980.5
AT5G06980.2
AT5G06980
hypothetical protein
arTal_v1_Chr3_-_17976774_17976774 0.64 AT3G48520.1
CYP94B3
cytochrome P450, family 94, subfamily B, polypeptide 3
arTal_v1_Chr1_+_25999837_25999837 0.64 AT1G69160.1
AT1G69160
suppressor
arTal_v1_Chr3_-_5171674_5171674 0.63 AT3G15354.5
SPA3
SPA1-related 3
arTal_v1_Chr5_+_7103384_7103419 0.63 AT5G20935.1
AT5G20935.2
CRR42
DUF3148 family protein
arTal_v1_Chr1_+_21042951_21042977 0.63 AT1G56220.4
AT1G56220.5
AT1G56220.3
AT1G56220
Dormancy/auxin associated family protein
arTal_v1_Chr3_+_10524181_10524181 0.63 AT3G28220.1
AT3G28220
TRAF-like family protein
arTal_v1_Chr2_+_15005064_15005064 0.62 AT2G35700.1
ERF38
ERF family protein 38
arTal_v1_Chr3_-_2890520_2890574 0.62 AT3G09390.2
AT3G09390.1
MT2A
metallothionein 2A
arTal_v1_Chr3_+_4544364_4544384 0.62 AT3G13810.5
AT3G13810.3
AT3G13810.4
AT3G13810.6
AT3G13810.2
AT3G13810.1
IDD11
indeterminate(ID)-domain 11
arTal_v1_Chr1_-_21635344_21635344 0.62 AT1G58320.1
AT1G58320
PLAC8 family protein
arTal_v1_Chr2_-_13005600_13005746 0.62 AT2G30520.2
AT2G30520.3
AT2G30520.1
RPT2
Phototropic-responsive NPH3 family protein
arTal_v1_Chr4_+_6745100_6745119 0.61 AT4G11040.2
AT4G11040.1
AT4G11040
Protein phosphatase 2C family protein
arTal_v1_Chr4_-_15857440_15857440 0.61 AT4G32860.1
AT4G32860
Avr9/Cf-9 rapidly elicited protein
arTal_v1_Chr2_+_14936565_14936565 0.60 AT2G35585.2
AT2G35585.1
AT2G35585
cystic fibrosis transmembrane conductance regulator
arTal_v1_Chr1_+_8692630_8692630 0.59 AT1G24530.1
AT1G24530
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_-_11719988_11719988 0.59 AT1G32450.1
NRT1.5
nitrate transporter 1.5
arTal_v1_Chr4_+_16881336_16881362 0.59 AT4G35560.1
AT4G35560.2
DAW1
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_-_28009450_28009451 0.59 AT1G74520.2
AT1G74520.1
HVA22A
HVA22 homologue A
arTal_v1_Chr2_-_15511607_15511607 0.59 AT2G36930.1
AT2G36930
zinc finger (C2H2 type) family protein
arTal_v1_Chr4_+_17739514_17739514 0.58 AT4G37750.1
ANT
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_+_25040540_25040540 0.58 AT5G62360.1
AT5G62360
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr1_-_22950444_22950488 0.58 AT1G62085.1
AT1G62085.2
AT1G62085
Mitochondrial transcription termination factor family protein
arTal_v1_Chr5_+_2167120_2167120 0.58 AT5G06980.1
AT5G06980
hypothetical protein
arTal_v1_Chr5_+_17973775_17973775 0.57 AT5G44575.1
AT5G44575
hypothetical protein
arTal_v1_Chr1_+_10918267_10918278 0.57 AT1G30760.2
AT1G30760.1
AT1G30760
FAD-binding Berberine family protein
arTal_v1_Chr2_+_7693596_7693596 0.57 AT2G17710.1
AT2G17710
Big1
arTal_v1_Chr1_-_30113489_30113489 0.56 AT1G80050.2
APT2
adenine phosphoribosyl transferase 2
arTal_v1_Chr2_+_12805667_12805714 0.56 AT2G30010.2
AT2G30010.1
TBL45
TRICHOME BIREFRINGENCE-LIKE 45
arTal_v1_Chr4_-_16285229_16285229 0.56 AT4G33980.1
AT4G33980
hypothetical protein
arTal_v1_Chr3_-_20939631_20939631 0.56 AT3G56480.1
AT3G56480
myosin heavy chain-like protein
arTal_v1_Chr3_-_14879792_14879792 0.56 AT3G42790.1
AL3
alfin-like 3
arTal_v1_Chr3_+_7541384_7541384 0.56 AT3G21420.1
LBO1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr2_-_14489767_14489767 0.55 AT2G34340.1
AT2G34340
senescence regulator (Protein of unknown function, DUF584)
arTal_v1_Chr5_-_4639835_4639835 0.55 AT5G14390.1
AT5G14390
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_-_5862462_5862475 0.55 AT5G17760.2
AT5G17760.1
AT5G17760
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr4_+_9257869_9257869 0.55 AT4G16390.1
SVR7
pentatricopeptide (PPR) repeat-containing protein
arTal_v1_Chr3_+_1795145_1795145 0.55 AT3G05980.1
AT3G05980
hypothetical protein
arTal_v1_Chr4_-_16285059_16285059 0.55 AT4G33980.2
AT4G33980
hypothetical protein
arTal_v1_Chr2_-_16757599_16757599 0.55 AT2G40120.1
AT2G40120
Protein kinase superfamily protein
arTal_v1_Chr3_+_5025383_5025383 0.55 AT3G14940.2
PPC3
phosphoenolpyruvate carboxylase 3
arTal_v1_Chr1_+_9259432_9259432 0.55 AT1G26770.1
EXPA10
expansin A10
arTal_v1_Chr5_-_19291103_19291103 0.54 AT5G47560.1
TDT
tonoplast dicarboxylate transporter
arTal_v1_Chr1_-_1659079_1659079 0.54 AT1G05570.3
CALS1
callose synthase 1
arTal_v1_Chr3_+_5025184_5025184 0.54 AT3G14940.1
PPC3
phosphoenolpyruvate carboxylase 3
arTal_v1_Chr5_+_642554_642554 0.54 AT5G02820.1
RHL2
Spo11/DNA topoisomerase VI, subunit A protein
arTal_v1_Chr3_+_19720077_19720165 0.54 AT3G53210.1
AT3G53210.2
AT3G53210.3
UMAMIT6
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr1_-_1659437_1659437 0.54 AT1G05570.2
CALS1
callose synthase 1
arTal_v1_Chr1_-_1658806_1658806 0.54 AT1G05570.4
CALS1
callose synthase 1
arTal_v1_Chr1_-_30202349_30202349 0.54 AT1G80340.1
GA3OX2
gibberellin 3-oxidase 2
arTal_v1_Chr5_+_20644525_20644525 0.54 AT5G50760.1
AT5G50760
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_+_14158452_14158452 0.54 AT1G37130.1
NIA2
nitrate reductase 2
arTal_v1_Chr1_-_1659611_1659611 0.53 AT1G05570.1
CALS1
callose synthase 1
arTal_v1_Chr3_+_21218981_21218981 0.53 AT3G57340.2
AT3G57340
DnaJ heat shock amino-terminal domain protein (DUF1977)
arTal_v1_Chr5_-_7007502_7007502 0.53 AT5G20700.1
AT5G20700
senescence-associated family protein, putative (DUF581)
arTal_v1_Chr5_-_26933286_26933352 0.52 AT5G67480.1
AT5G67480.3
BT4
BTB and TAZ domain protein 4
arTal_v1_Chr3_-_1992864_1992864 0.52 AT3G06483.1
PDK
pyruvate dehydrogenase kinase
arTal_v1_Chr1_-_30114010_30114010 0.52 AT1G80050.1
APT2
adenine phosphoribosyl transferase 2
arTal_v1_Chr3_+_21218751_21218751 0.52 AT3G57340.1
AT3G57340
DnaJ heat shock amino-terminal domain protein (DUF1977)
arTal_v1_Chr3_-_20376522_20376522 0.52 AT3G54990.1
AT3G54990.2
SMZ
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_+_8584535_8584535 0.51 AT5G24920.1
GDU5
glutamine dumper 5
arTal_v1_Chr2_+_16076289_16076289 0.51 AT2G38380.1
AT2G38380
Peroxidase superfamily protein
arTal_v1_Chr3_-_4657723_4657723 0.51 AT3G14060.1
AT3G14060
hypothetical protein
arTal_v1_Chr5_-_26932825_26932825 0.51 AT5G67480.2
BT4
BTB and TAZ domain protein 4
arTal_v1_Chr2_+_11650358_11650359 0.51 AT2G27230.1
AT2G27230.2
LHW
transcription factor-like protein
arTal_v1_Chr3_-_21402899_21402940 0.51 AT3G57780.5
AT3G57780.4
AT3G57780.3
AT3G57780
nucleolar-like protein
arTal_v1_Chr3_-_7984833_7984833 0.51 AT3G22540.1
AT3G22540
hypothetical protein (DUF1677)
arTal_v1_Chr4_+_2804403_2804451 0.51 AT4G05520.1
AT4G05520.2
EHD2
EPS15 homology domain 2
arTal_v1_Chr4_-_10291058_10291058 0.50 AT4G18700.1
CIPK12
CBL-interacting protein kinase 12
arTal_v1_Chr1_+_5578791_5578791 0.50 AT1G16310.2
AT1G16310
Cation efflux family protein
arTal_v1_Chr5_+_5306740_5306740 0.50 AT5G16240.1
AT5G16240
Plant stearoyl-acyl-carrier-protein desaturase family protein
arTal_v1_Chr3_-_21434648_21434648 0.50 AT3G57880.1
AT3G57880.3
AT3G57880.4
AT3G57880
Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
arTal_v1_Chr5_-_24317935_24317935 0.50 AT5G60460.2
AT5G60460
Preprotein translocase Sec, Sec61-beta subunit protein
arTal_v1_Chr2_-_852321_852321 0.50 AT2G02930.1
GSTF3
glutathione S-transferase F3
arTal_v1_Chr1_+_18876810_18876810 0.50 AT1G50930.2
AT1G50930.1
AT1G50930
Serine/Threonine-kinase
arTal_v1_Chr2_+_11380463_11380463 0.49 AT2G26710.1
BAS1
Cytochrome P450 superfamily protein
arTal_v1_Chr2_+_18132484_18132484 0.49 AT2G43760.3
AT2G43760.2
AT2G43760.1
AT2G43760
molybdopterin biosynthesis MoaE family protein
arTal_v1_Chr3_-_5148340_5148340 0.49 AT3G15300.1
AT3G15300
VQ motif-containing protein
arTal_v1_Chr5_-_24318241_24318241 0.49 AT5G60460.1
AT5G60460
Preprotein translocase Sec, Sec61-beta subunit protein
arTal_v1_Chr5_-_8659352_8659352 0.49 AT5G25110.1
CIPK25
CBL-interacting protein kinase 25
arTal_v1_Chr3_+_2016246_2016329 0.49 AT3G06510.1
AT3G06510.2
SFR2
Glycosyl hydrolase superfamily protein
arTal_v1_Chr3_-_20142763_20142763 0.49 AT3G54400.1
AT3G54400
Eukaryotic aspartyl protease family protein
arTal_v1_Chr1_+_25438748_25438788 0.49 AT1G67850.6
AT1G67850.7
AT1G67850
lysine ketoglutarate reductase trans-splicing protein (DUF707)
arTal_v1_Chr1_+_1889362_1889362 0.49 AT1G06180.1
MYB13
myb domain protein 13
arTal_v1_Chr1_+_9259750_9259750 0.49 AT1G26770.2
EXPA10
expansin A10
arTal_v1_Chr3_-_3890931_3891000 0.48 AT3G12200.1
AT3G12200.3
AT3G12200.4
AT3G12200.2
Nek7
NIMA-related kinase 7
arTal_v1_Chr4_+_1262245_1262266 0.48 AT4G02830.2
AT4G02830.1
AT4G02830.3
AT4G02830
hypothetical protein
arTal_v1_Chr5_+_25756272_25756272 0.48 AT5G64420.1
AT5G64420
DNA polymerase V family
arTal_v1_Chr1_-_7513396_7513481 0.48 AT1G21460.2
AT1G21460.1
SWEET1
Nodulin MtN3 family protein
arTal_v1_Chr5_+_947311_947311 0.48 AT5G03670.2
TRM28
histone-lysine N-methyltransferase SETD1B-like protein
arTal_v1_Chr5_+_947146_947146 0.48 AT5G03670.1
TRM28
histone-lysine N-methyltransferase SETD1B-like protein
arTal_v1_Chr5_-_25978439_25978439 0.48 AT5G65040.1
AT5G65040
senescence-associated family protein (DUF581)
arTal_v1_Chr4_-_18370698_18370698 0.48 AT4G39510.1
CYP96A12
cytochrome P450, family 96, subfamily A, polypeptide 12
arTal_v1_Chr1_-_7160590_7160590 0.48 AT1G20650.1
ASG5
Protein kinase superfamily protein
arTal_v1_Chr1_+_5844646_5844646 0.48 AT1G17100.1
HBP1
SOUL heme-binding family protein
arTal_v1_Chr1_-_23262002_23262002 0.47 AT1G62810.1
CuAO1
Copper amine oxidase family protein
arTal_v1_Chr5_-_24559879_24559936 0.47 AT5G61020.2
AT5G61020.1
ECT3
evolutionarily conserved C-terminal region 3
arTal_v1_Chr5_+_1684566_1684566 0.47 AT5G05640.1
AT5G05640
nucleoprotein-like protein
arTal_v1_Chr4_-_7553332_7553375 0.47 AT4G12910.2
AT4G12910.1
scpl20
serine carboxypeptidase-like 20
arTal_v1_Chr5_-_10943378_10943378 0.47 AT5G28920.1
AT5G28920
hypothetical protein
arTal_v1_Chr1_+_28940486_28940486 0.47 AT1G77000.4
AT1G77000.1
SKP2B
RNI-like superfamily protein
arTal_v1_Chr1_-_29064637_29064637 0.47 AT1G77330.1
AT1G77330
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr3_+_9064525_9064525 0.47 AT3G24830.1
AT3G24830
Ribosomal protein L13 family protein
arTal_v1_Chr3_+_3942257_3942257 0.47 AT3G12390.1
AT3G12390
Nascent polypeptide-associated complex (NAC), alpha subunit family protein
arTal_v1_Chr3_+_5374248_5374248 0.46 AT3G15890.1
AT3G15890
Protein kinase superfamily protein
arTal_v1_Chr3_-_7463525_7463644 0.46 AT3G21250.1
AT3G21250.6
AT3G21250.5
AT3G21250.3
AT3G21250.2
AT3G21250.4
ABCC8
multidrug resistance-associated protein 6
arTal_v1_Chr4_+_6557177_6557177 0.46 AT4G10610.2
CID12
CTC-interacting domain 12
arTal_v1_Chr1_+_28940147_28940272 0.46 AT1G77000.2
AT1G77000.3
SKP2B
RNI-like superfamily protein
arTal_v1_Chr3_+_1727151_1727151 0.46 AT3G05800.1
AIF1
AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1
arTal_v1_Chr3_+_7673276_7673276 0.46 AT3G21770.1
AT3G21770
Peroxidase superfamily protein
arTal_v1_Chr3_-_7465283_7465283 0.46 AT3G21260.2
AT3G21260.1
GLTP3
Glycolipid transfer protein (GLTP) family protein
arTal_v1_Chr4_+_2543422_2543422 0.46 AT4G04972.1
AT4G04972
hypothetical protein
arTal_v1_Chr3_+_19624278_19624287 0.46 AT3G52920.1
AT3G52920.2
AT3G52920
transcriptional activator (DUF662)
arTal_v1_Chr1_+_17031211_17031211 0.46 AT1G45050.2
AT1G45050.1
ATUBC2-1
Ubiquitin-conjugating enzyme family protein
arTal_v1_Chr4_+_6556982_6556982 0.46 AT4G10610.1
CID12
CTC-interacting domain 12
arTal_v1_Chr2_+_9293261_9293261 0.46 AT2G21790.1
RNR1
ribonucleotide reductase 1
arTal_v1_Chr1_-_28792640_28792719 0.46 AT1G76710.2
AT1G76710.4
AT1G76710.1
AT1G76710.3
ASHH1
SET domain group 26
arTal_v1_Chr3_-_5845220_5845220 0.45 AT3G17130.1
AT3G17130
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr5_+_19736540_19736647 0.45 AT5G48660.1
AT5G48660.2
AT5G48660
B-cell receptor-associated protein 31-like protein
arTal_v1_Chr5_-_25335549_25335570 0.45 AT5G63160.3
AT5G63160.1
AT5G63160.2
BT1
BTB and TAZ domain protein 1
arTal_v1_Chr1_+_27628678_27628678 0.45 AT1G73480.1
AT1G73480
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_+_28561281_28561281 0.45 AT1G76130.1
AMY2
alpha-amylase-like 2
arTal_v1_Chr5_-_19504534_19504534 0.45 AT5G48110.1
AT5G48110
Terpenoid cyclases/Protein prenyltransferases superfamily protein
arTal_v1_Chr1_+_26189775_26189775 0.45 AT1G69620.1
RPL34
ribosomal protein L34
arTal_v1_Chr2_+_13775570_13775570 0.45 AT2G32440.2
KAO2
ent-kaurenoic acid hydroxylase 2
arTal_v1_Chr1_+_3041996_3041996 0.45 AT1G09430.1
ACLA-3
ATP-citrate lyase A-3

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G55110

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.4 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.3 1.7 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.2 1.2 GO:0035627 ceramide transport(GO:0035627)
0.2 1.2 GO:0000729 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.2 1.1 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.2 1.2 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.2 0.6 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.2 1.1 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.2 0.7 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.2 0.5 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 0.5 GO:0036115 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.2 0.6 GO:0035865 cellular response to potassium ion(GO:0035865)
0.2 0.6 GO:1901600 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.2 0.6 GO:0048480 stigma development(GO:0048480)
0.1 0.4 GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process(GO:1990116)
0.1 0.4 GO:2001009 regulation of plant-type cell wall cellulose biosynthetic process(GO:2001009)
0.1 0.4 GO:0071258 cellular response to gravity(GO:0071258)
0.1 0.9 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.1 0.7 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system(GO:0010201)
0.1 0.4 GO:0032196 transposition(GO:0032196)
0.1 1.4 GO:0035435 phosphate ion transmembrane transport(GO:0035435)
0.1 0.5 GO:0009584 detection of visible light(GO:0009584)
0.1 0.4 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.1 0.3 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.1 2.2 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 0.7 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.1 0.3 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.1 0.7 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.1 0.3 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 0.6 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.1 0.4 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 0.4 GO:0034389 lipid particle organization(GO:0034389)
0.1 1.0 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.1 0.5 GO:0009590 detection of gravity(GO:0009590)
0.1 0.8 GO:0015804 neutral amino acid transport(GO:0015804)
0.1 0.4 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.1 0.3 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.1 0.7 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.1 0.4 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 0.3 GO:0015904 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.1 0.7 GO:0080143 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.1 1.3 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 0.3 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.1 0.3 GO:0019499 cyanide metabolic process(GO:0019499)
0.1 0.5 GO:0010338 leaf formation(GO:0010338)
0.1 0.2 GO:0048832 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.1 0.2 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 0.2 GO:0044236 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 0.2 GO:0010377 guard cell fate commitment(GO:0010377)
0.1 0.2 GO:0090547 response to low humidity(GO:0090547)
0.1 0.6 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.1 0.3 GO:0019388 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.1 0.3 GO:0030322 stabilization of membrane potential(GO:0030322)
0.1 0.6 GO:0032456 endocytic recycling(GO:0032456)
0.1 0.8 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.1 0.2 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.1 0.6 GO:0009610 response to symbiotic fungus(GO:0009610)
0.1 0.4 GO:0010071 root meristem specification(GO:0010071)
0.1 0.4 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.1 0.2 GO:0010376 stomatal complex formation(GO:0010376)
0.1 0.4 GO:0010080 regulation of floral meristem growth(GO:0010080) floral meristem growth(GO:0010451)
0.1 0.5 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 0.3 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 0.6 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.1 0.8 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.1 0.3 GO:0051211 anisotropic cell growth(GO:0051211)
0.1 1.7 GO:0031647 regulation of protein stability(GO:0031647)
0.1 0.2 GO:0018119 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.1 0.3 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.1 0.3 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.1 0.3 GO:2000580 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.1 1.4 GO:0006826 iron ion transport(GO:0006826)
0.1 0.4 GO:0043481 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 0.1 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.1 0.3 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.1 0.2 GO:0071494 cellular response to UV-C(GO:0071494)
0.1 0.2 GO:0030835 negative regulation of actin filament depolymerization(GO:0030835) negative regulation of protein complex disassembly(GO:0043242) actin filament capping(GO:0051693) negative regulation of protein depolymerization(GO:1901880)
0.1 0.2 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 0.2 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.1 0.2 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.1 0.8 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.2 GO:0043181 vacuolar sequestering(GO:0043181)
0.1 0.4 GO:0007021 tubulin complex assembly(GO:0007021)
0.1 0.3 GO:1901535 regulation of DNA demethylation(GO:1901535)
0.1 0.5 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.1 0.1 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.1 0.1 GO:0018279 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.1 0.2 GO:0046898 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217)
0.1 0.2 GO:0019343 cysteine biosynthetic process via cystathionine(GO:0019343)
0.1 0.2 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.1 0.2 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 1.0 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.1 0.4 GO:0045824 negative regulation of innate immune response(GO:0045824)
0.1 0.3 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.1 0.2 GO:2000011 regulation of adaxial/abaxial pattern formation(GO:2000011)
0.1 0.4 GO:0080187 floral organ senescence(GO:0080187)
0.1 0.3 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.1 0.4 GO:0009099 valine biosynthetic process(GO:0009099)
0.1 0.2 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.1 0.2 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.1 0.3 GO:0006106 fumarate metabolic process(GO:0006106)
0.1 0.4 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.1 0.2 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.0 0.7 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.9 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.2 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.0 0.1 GO:0050777 negative regulation of immune response(GO:0050777)
0.0 0.1 GO:0002188 translation reinitiation(GO:0002188)
0.0 0.6 GO:0017157 regulation of exocytosis(GO:0017157)
0.0 0.2 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.0 0.3 GO:0010358 leaf shaping(GO:0010358)
0.0 0.2 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.8 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.5 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 1.3 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.4 GO:0071490 photoprotection(GO:0010117) cellular response to far red light(GO:0071490)
0.0 0.1 GO:2000785 regulation of autophagosome assembly(GO:2000785)
0.0 1.2 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 0.5 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.0 0.1 GO:0015692 lead ion transport(GO:0015692)
0.0 0.7 GO:0046352 disaccharide catabolic process(GO:0046352)
0.0 0.5 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 0.3 GO:0048359 mucilage metabolic process involved in seed coat development(GO:0048359)
0.0 0.2 GO:0009305 protein biotinylation(GO:0009305)
0.0 0.1 GO:0035493 SNARE complex assembly(GO:0035493)
0.0 0.5 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0 0.2 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.0 1.2 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 1.3 GO:0009825 multidimensional cell growth(GO:0009825)
0.0 1.6 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.2 GO:0051196 regulation of coenzyme metabolic process(GO:0051196)
0.0 1.0 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.2 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.0 0.2 GO:0010232 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.0 0.7 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.4 GO:0018107 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.0 0.3 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.0 0.2 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.9 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.2 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.0 0.8 GO:0051260 protein homooligomerization(GO:0051260)
0.0 0.2 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.3 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.9 GO:0009638 phototropism(GO:0009638)
0.0 0.6 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0 1.1 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.3 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.0 0.2 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.0 0.1 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.0 0.1 GO:0034034 purine ribonucleotide catabolic process(GO:0009154) ribonucleotide catabolic process(GO:0009261) coenzyme A catabolic process(GO:0015938) nucleoside bisphosphate catabolic process(GO:0033869) ribonucleoside bisphosphate catabolic process(GO:0034031) purine nucleoside bisphosphate catabolic process(GO:0034034)
0.0 0.1 GO:0033306 phytol metabolic process(GO:0033306)
0.0 1.0 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 1.8 GO:0072665 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.0 1.5 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.1 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.1 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.0 0.1 GO:0006527 arginine catabolic process(GO:0006527)
0.0 1.6 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 0.1 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.0 0.2 GO:0071731 response to nitric oxide(GO:0071731)
0.0 0.3 GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement(GO:1901527)
0.0 0.2 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.0 0.2 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.0 0.4 GO:0010380 regulation of chlorophyll biosynthetic process(GO:0010380)
0.0 0.1 GO:0010067 procambium histogenesis(GO:0010067)
0.0 0.7 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.0 0.3 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.0 0.2 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.0 0.3 GO:0045116 protein neddylation(GO:0045116)
0.0 0.2 GO:0005513 detection of calcium ion(GO:0005513)
0.0 0.1 GO:0042128 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.0 1.7 GO:0009664 plant-type cell wall organization(GO:0009664)
0.0 0.2 GO:1904482 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.0 0.3 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.5 GO:0006085 acetyl-CoA biosynthetic process(GO:0006085)
0.0 0.1 GO:0010450 inflorescence meristem growth(GO:0010450)
0.0 0.5 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.3 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.4 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.1 GO:0080117 secondary growth(GO:0080117)
0.0 0.1 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.0 0.4 GO:0006265 DNA topological change(GO:0006265)
0.0 0.3 GO:0036297 interstrand cross-link repair(GO:0036297)
0.0 1.3 GO:0072350 tricarboxylic acid metabolic process(GO:0072350)
0.0 0.2 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.0 0.4 GO:0032544 plastid translation(GO:0032544)
0.0 0.1 GO:0080093 regulation of photorespiration(GO:0080093)
0.0 0.1 GO:0018027 peptidyl-lysine dimethylation(GO:0018027)
0.0 0.7 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.0 0.1 GO:0060260 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.0 1.0 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.0 0.2 GO:0070536 protein K63-linked deubiquitination(GO:0070536) protein K48-linked deubiquitination(GO:0071108)
0.0 0.2 GO:0007020 microtubule nucleation(GO:0007020)
0.0 0.2 GO:0051176 positive regulation of sulfur metabolic process(GO:0051176)
0.0 0.2 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.0 0.7 GO:0034250 positive regulation of cellular amide metabolic process(GO:0034250) positive regulation of translation(GO:0045727)
0.0 0.1 GO:1901562 response to paraquat(GO:1901562)
0.0 0.2 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.3 GO:0045227 UDP-L-arabinose biosynthetic process(GO:0033358) extracellular polysaccharide biosynthetic process(GO:0045226) capsule polysaccharide biosynthetic process(GO:0045227) capsule organization(GO:0045230) extracellular polysaccharide metabolic process(GO:0046379)
0.0 0.2 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.6 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.2 GO:0016554 cytidine to uridine editing(GO:0016554)
0.0 0.1 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 0.0 GO:0043409 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
0.0 0.1 GO:0006828 manganese ion transport(GO:0006828)
0.0 0.1 GO:0060964 regulation of gene silencing by miRNA(GO:0060964)
0.0 0.1 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 2.2 GO:0009739 response to gibberellin(GO:0009739)
0.0 0.4 GO:0010167 response to nitrate(GO:0010167)
0.0 0.4 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.3 GO:0019511 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.3 GO:0072663 protein targeting to peroxisome(GO:0006625) protein localization to peroxisome(GO:0072662) establishment of protein localization to peroxisome(GO:0072663)
0.0 0.1 GO:0010155 regulation of proton transport(GO:0010155)
0.0 0.3 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.3 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.1 GO:0006296 nucleotide-excision repair, DNA incision, 5'-to lesion(GO:0006296)
0.0 0.4 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.0 0.3 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.0 0.2 GO:0048829 root cap development(GO:0048829)
0.0 0.7 GO:0018208 peptidyl-proline modification(GO:0018208)
0.0 0.2 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575) regulation of short-day photoperiodism, flowering(GO:0048587)
0.0 0.1 GO:0090603 sieve element differentiation(GO:0090603)
0.0 0.3 GO:0045927 positive regulation of growth(GO:0045927)
0.0 0.2 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.2 GO:0043486 histone exchange(GO:0043486)
0.0 0.9 GO:0009749 response to glucose(GO:0009749)
0.0 1.3 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.5 GO:0033108 mitochondrial respiratory chain complex assembly(GO:0033108)
0.0 0.9 GO:0009787 regulation of abscisic acid-activated signaling pathway(GO:0009787)
0.0 0.1 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.0 0.1 GO:0050810 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.0 0.1 GO:0043617 cellular response to sucrose starvation(GO:0043617)
0.0 0.3 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.9 GO:0006612 protein targeting to membrane(GO:0006612)
0.0 0.1 GO:0046835 carbohydrate phosphorylation(GO:0046835)
0.0 0.8 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.1 GO:0070199 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.0 0.5 GO:0006730 one-carbon metabolic process(GO:0006730)
0.0 0.3 GO:0022904 respiratory electron transport chain(GO:0022904)
0.0 0.6 GO:0030705 cytoskeleton-dependent intracellular transport(GO:0030705)
0.0 0.2 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.7 GO:0048825 cotyledon development(GO:0048825)
0.0 0.3 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.0 0.2 GO:0010099 regulation of photomorphogenesis(GO:0010099)
0.0 0.1 GO:0006526 arginine biosynthetic process(GO:0006526)
0.0 0.3 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.2 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.2 GO:0071901 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of protein serine/threonine kinase activity(GO:0071901) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.0 0.1 GO:0030149 sphingolipid catabolic process(GO:0030149)
0.0 0.1 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.1 GO:0051014 actin filament severing(GO:0051014)
0.0 0.2 GO:0046417 chorismate metabolic process(GO:0046417)
0.0 0.3 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.3 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.0 0.4 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.1 GO:0016598 protein arginylation(GO:0016598)
0.0 0.0 GO:0010434 bract development(GO:0010432) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.0 0.1 GO:0080009 mRNA methylation(GO:0080009)
0.0 0.1 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655) phosphatidylglycerol metabolic process(GO:0046471)
0.0 0.1 GO:0045047 protein targeting to ER(GO:0045047) establishment of protein localization to endoplasmic reticulum(GO:0072599)
0.0 0.8 GO:0015994 chlorophyll metabolic process(GO:0015994)
0.0 0.6 GO:0006818 hydrogen transport(GO:0006818) proton transport(GO:0015992) hydrogen ion transmembrane transport(GO:1902600)
0.0 0.2 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.2 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.1 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.0 0.3 GO:0009853 photorespiration(GO:0009853)
0.0 0.2 GO:0006301 postreplication repair(GO:0006301)
0.0 0.1 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.2 GO:0032776 DNA methylation on cytosine(GO:0032776)
0.0 0.1 GO:0043966 histone H3 acetylation(GO:0043966)
0.0 0.1 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 0.7 GO:0016571 histone methylation(GO:0016571)
0.0 0.4 GO:0010075 regulation of meristem growth(GO:0010075)
0.0 0.1 GO:0016559 peroxisome fission(GO:0016559)
0.0 1.1 GO:0018209 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.0 0.1 GO:0006476 protein deacetylation(GO:0006476)
0.0 0.1 GO:0018874 benzoate metabolic process(GO:0018874)
0.0 0.1 GO:0043171 peptide catabolic process(GO:0043171)
0.0 0.5 GO:0006413 translational initiation(GO:0006413)
0.0 0.0 GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly(GO:0033615)
0.0 0.4 GO:0048767 root hair elongation(GO:0048767)
0.0 0.1 GO:0006513 protein monoubiquitination(GO:0006513)
0.0 0.1 GO:0051775 response to redox state(GO:0051775)
0.0 0.2 GO:0016236 macroautophagy(GO:0016236)
0.0 0.0 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.0 0.3 GO:0007186 G-protein coupled receptor signaling pathway(GO:0007186)
0.0 0.4 GO:0030004 cellular monovalent inorganic cation homeostasis(GO:0030004)
0.0 0.1 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.0 0.1 GO:0009785 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.2 0.6 GO:0030870 Mre11 complex(GO:0030870)
0.1 0.4 GO:1990112 RQC complex(GO:1990112)
0.1 0.9 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.1 2.2 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 0.3 GO:0009501 amyloplast(GO:0009501)
0.1 0.5 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.1 1.0 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 0.6 GO:0035861 site of double-strand break(GO:0035861)
0.1 0.7 GO:0072546 ER membrane protein complex(GO:0072546)
0.1 0.7 GO:0017119 Golgi transport complex(GO:0017119)
0.1 0.3 GO:0030286 dynein complex(GO:0030286)
0.1 0.2 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.1 0.3 GO:0034515 proteasome storage granule(GO:0034515)
0.1 0.4 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.1 0.4 GO:0031298 replication fork protection complex(GO:0031298)
0.1 0.3 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 0.6 GO:0016272 prefoldin complex(GO:0016272)
0.1 0.5 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 0.3 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.1 0.3 GO:0009346 citrate lyase complex(GO:0009346)
0.1 0.2 GO:0005846 nuclear cap binding complex(GO:0005846)
0.0 0.1 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.0 0.2 GO:0000922 spindle pole(GO:0000922)
0.0 0.2 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.0 0.9 GO:0055028 cortical microtubule(GO:0055028)
0.0 0.2 GO:0032155 equatorial microtubule organizing center(GO:0000923) cell division site part(GO:0032155)
0.0 1.5 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 4.9 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.3 GO:0016363 nuclear matrix(GO:0016363)
0.0 1.0 GO:0009574 preprophase band(GO:0009574)
0.0 0.7 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.3 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 0.8 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.1 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.3 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.0 0.2 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.2 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.0 0.2 GO:0005881 cytoplasmic microtubule(GO:0005881)
0.0 0.3 GO:0042555 MCM complex(GO:0042555)
0.0 0.3 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.0 0.2 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 0.4 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.3 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 0.5 GO:0009508 plastid chromosome(GO:0009508)
0.0 1.8 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.1 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0 0.1 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.0 0.5 GO:0031358 intrinsic component of plastid outer membrane(GO:0031354) integral component of plastid outer membrane(GO:0031355) intrinsic component of chloroplast outer membrane(GO:0031358) integral component of chloroplast outer membrane(GO:0031359)
0.0 0.3 GO:0005688 U6 snRNP(GO:0005688)
0.0 0.2 GO:0030897 HOPS complex(GO:0030897)
0.0 2.3 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.5 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.5 GO:0005871 kinesin complex(GO:0005871)
0.0 0.4 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 0.3 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.3 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.0 0.2 GO:0000124 SAGA complex(GO:0000124)
0.0 0.2 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.1 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.0 0.4 GO:0005753 mitochondrial proton-transporting ATP synthase complex(GO:0005753)
0.0 0.4 GO:0031304 intrinsic component of mitochondrial inner membrane(GO:0031304)
0.0 1.8 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 1.0 GO:0005770 late endosome(GO:0005770)
0.0 0.2 GO:0005839 proteasome core complex(GO:0005839)
0.0 0.1 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.0 0.1 GO:0005787 signal peptidase complex(GO:0005787)
0.0 1.0 GO:0010287 plastoglobule(GO:0010287)
0.0 0.1 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 0.2 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.0 0.6 GO:0016592 mediator complex(GO:0016592)
0.0 0.5 GO:0009504 cell plate(GO:0009504)
0.0 0.2 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 0.1 GO:0030139 endocytic vesicle(GO:0030139)
0.0 0.2 GO:0034399 nuclear periphery(GO:0034399)
0.0 0.1 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.0 1.4 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 3.5 GO:0042579 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.2 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.6 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.1 GO:0005765 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 0.9 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.6 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.1 GO:0000439 core TFIIH complex(GO:0000439)
0.0 0.3 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.0 0.2 GO:0016459 myosin complex(GO:0016459)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.7 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.3 1.4 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.3 1.1 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.3 1.4 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.3 0.8 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.2 0.7 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.2 1.2 GO:0035620 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.2 0.7 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.2 1.4 GO:0019904 protein domain specific binding(GO:0019904)
0.2 1.1 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.2 0.8 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.2 0.8 GO:0004556 alpha-amylase activity(GO:0004556)
0.2 0.6 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.2 0.6 GO:0000403 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.2 1.1 GO:0030544 Hsp70 protein binding(GO:0030544)
0.2 0.5 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.2 0.5 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.2 0.5 GO:0061731 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.1 0.8 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.1 1.1 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.5 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.1 2.7 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.8 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.1 0.6 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.5 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.1 0.4 GO:0016504 peptidase activator activity(GO:0016504)
0.1 2.2 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 0.3 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 0.3 GO:0008936 nicotinamidase activity(GO:0008936)
0.1 0.3 GO:0043325 phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.1 0.8 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.3 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 0.5 GO:0009883 red or far-red light photoreceptor activity(GO:0009883)
0.1 0.3 GO:0019788 NEDD8 transferase activity(GO:0019788)
0.1 0.9 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.1 0.3 GO:0008517 folic acid transporter activity(GO:0008517)
0.1 0.2 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.1 0.4 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.1 0.4 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.1 0.5 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.1 0.3 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.1 0.2 GO:0004106 chorismate mutase activity(GO:0004106)
0.1 0.3 GO:0004075 biotin carboxylase activity(GO:0004075)
0.1 1.1 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.1 0.8 GO:0017022 myosin binding(GO:0017022)
0.1 1.1 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.1 0.3 GO:0008493 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.2 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.1 0.3 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.1 1.4 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 0.5 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 0.3 GO:0051959 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.1 0.6 GO:0035198 miRNA binding(GO:0035198)
0.1 0.4 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.1 0.4 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.1 0.2 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.1 0.3 GO:0000150 recombinase activity(GO:0000150)
0.1 0.3 GO:0022842 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.1 0.7 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 0.4 GO:0052852 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.1 0.2 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.1 0.9 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.1 0.6 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.1 0.3 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.1 0.4 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.1 1.1 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 0.3 GO:0001664 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.1 0.5 GO:0000014 single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.1 0.3 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.1 0.3 GO:0003785 actin monomer binding(GO:0003785)
0.1 0.7 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.4 GO:0048487 beta-tubulin binding(GO:0048487)
0.1 0.3 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.1 0.3 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.1 0.3 GO:0010313 phytochrome binding(GO:0010313)
0.1 0.4 GO:0016411 acylglycerol O-acyltransferase activity(GO:0016411)
0.1 0.2 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.1 0.3 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.4 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.1 0.2 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 0.7 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.1 0.3 GO:0009884 cytokinin receptor activity(GO:0009884)
0.1 0.2 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.1 0.3 GO:0004333 fumarate hydratase activity(GO:0004333)
0.1 0.4 GO:0043015 gamma-tubulin binding(GO:0043015)
0.0 0.4 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.5 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.0 0.2 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.5 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0 0.2 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.0 0.2 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.3 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.0 0.1 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.0 0.4 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.2 GO:0052595 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.0 0.9 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.0 0.3 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 1.7 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.0 0.2 GO:0004335 galactokinase activity(GO:0004335)
0.0 0.3 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.0 0.3 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.0 0.2 GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity(GO:0004077) biotin-protein ligase activity(GO:0018271)
0.0 0.3 GO:0010011 auxin binding(GO:0010011)
0.0 0.1 GO:0016972 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.0 0.3 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.0 0.2 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.6 GO:0019903 protein phosphatase binding(GO:0019903)
0.0 0.3 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.0 0.3 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.0 0.2 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.0 0.5 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.2 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.0 0.1 GO:0030332 cyclin binding(GO:0030332)
0.0 0.2 GO:0038199 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 0.3 GO:0004467 long-chain fatty acid-CoA ligase activity(GO:0004467) decanoate--CoA ligase activity(GO:0102391)
0.0 0.1 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.0 0.4 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.6 GO:0016018 drug binding(GO:0008144) cyclosporin A binding(GO:0016018)
0.0 0.3 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.0 0.1 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.0 0.6 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.5 GO:0031418 L-ascorbic acid binding(GO:0031418)
0.0 0.1 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.0 0.2 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.0 0.2 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 0.1 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.0 0.7 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.1 GO:0015645 fatty acid ligase activity(GO:0015645)
0.0 0.8 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.4 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.1 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 0.2 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.0 1.3 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.3 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.0 0.2 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 0.1 GO:0019902 phosphatase binding(GO:0019902)
0.0 0.2 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.4 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 0.1 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 1.2 GO:0017137 Rab GTPase binding(GO:0017137)
0.0 0.3 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.3 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.0 0.1 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.0 0.3 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.1 GO:0004096 catalase activity(GO:0004096)
0.0 0.1 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.0 0.3 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 0.5 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.2 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.1 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 1.5 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.4 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.4 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.1 GO:0070137 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.0 0.2 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.1 GO:0051723 protein methylesterase activity(GO:0051723)
0.0 0.1 GO:0004356 glutamate-ammonia ligase activity(GO:0004356) ammonia ligase activity(GO:0016211) acid-ammonia (or amide) ligase activity(GO:0016880)
0.0 0.3 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084)
0.0 1.1 GO:0009931 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.1 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.0 0.1 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 0.1 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457)
0.0 0.3 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 0.2 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.1 GO:0015166 myo-inositol transmembrane transporter activity(GO:0005365) myo-inositol:proton symporter activity(GO:0005366) polyol transmembrane transporter activity(GO:0015166)
0.0 0.4 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 0.1 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.0 0.2 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.1 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.1 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.1 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.2 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.1 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.0 0.2 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 0.2 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.0 0.9 GO:0019843 rRNA binding(GO:0019843)
0.0 0.1 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.0 0.8 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.1 GO:0017108 5'-flap endonuclease activity(GO:0017108) flap endonuclease activity(GO:0048256)
0.0 1.5 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 1.7 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.1 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.0 0.9 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.3 GO:0015248 sterol transporter activity(GO:0015248)
0.0 0.1 GO:0000702 oxidized base lesion DNA N-glycosylase activity(GO:0000702)
0.0 0.5 GO:0004407 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.0 0.3 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.1 GO:0004057 arginyltransferase activity(GO:0004057)
0.0 0.3 GO:0060090 binding, bridging(GO:0060090)
0.0 0.2 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0 1.1 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.5 GO:0042393 histone binding(GO:0042393)
0.0 0.1 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.0 0.7 GO:0043621 protein self-association(GO:0043621)
0.0 0.2 GO:0017025 TBP-class protein binding(GO:0017025)
0.0 1.9 GO:0003682 chromatin binding(GO:0003682)
0.0 0.4 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.1 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.6 GO:0016831 carboxy-lyase activity(GO:0016831)
0.0 0.1 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.0 0.2 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 0.6 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 0.0 GO:0019781 NEDD8 activating enzyme activity(GO:0019781)
0.0 0.1 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
0.0 7.0 GO:0044212 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)
0.0 1.0 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.3 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.0 0.0 GO:0016429 tRNA (adenine-N1-)-methyltransferase activity(GO:0016429)
0.0 0.1 GO:0004806 triglyceride lipase activity(GO:0004806)
0.0 0.7 GO:0036459 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.2 0.8 PID MYC PATHWAY C-MYC pathway
0.2 0.5 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.4 ST G ALPHA I PATHWAY G alpha i Pathway
0.1 0.7 PID AP1 PATHWAY AP-1 transcription factor network
0.1 1.0 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.1 0.2 PID DELTA NP63 PATHWAY Validated transcriptional targets of deltaNp63 isoforms
0.1 0.3 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 0.0 PID TCPTP PATHWAY Signaling events mediated by TCPTP
0.0 0.1 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 REACTOME DEADENYLATION OF MRNA Genes involved in Deadenylation of mRNA
0.2 0.5 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.1 0.4 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.1 0.4 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.1 0.7 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.1 0.5 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.1 0.3 REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT Genes involved in SLC-mediated transmembrane transport
0.1 1.4 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 0.2 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.1 0.3 REACTOME MITOTIC G2 G2 M PHASES Genes involved in Mitotic G2-G2/M phases
0.0 1.1 REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE Genes involved in SRP-dependent cotranslational protein targeting to membrane
0.0 0.3 REACTOME RNA POL II PRE TRANSCRIPTION EVENTS Genes involved in RNA Polymerase II Pre-transcription Events
0.0 0.3 REACTOME HEMOSTASIS Genes involved in Hemostasis
0.0 0.0 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.0 0.5 REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS Genes involved in Metabolism of lipids and lipoproteins
0.0 0.1 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA