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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT1G72740

Z-value: 1.89

Transcription factors associated with AT1G72740

Gene Symbol Gene ID Gene Info
AT1G72740
AT1G72740 Homeodomain-like/winged-helix DNA-binding family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT1G72740arTal_v1_Chr1_-_27382924_273829240.273.6e-01Click!

Activity profile of AT1G72740 motif

Sorted Z-values of AT1G72740 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr4_-_7401951_7401951 4.13 AT4G12470.1
AZI1
azelaic acid induced 1
arTal_v1_Chr5_-_14753088_14753088 3.34 AT5G37260.1
RVE2
Homeodomain-like superfamily protein
arTal_v1_Chr1_-_9275193_9275193 3.13 AT1G26790.1
AT1G26790
Dof-type zinc finger DNA-binding family protein
arTal_v1_Chr1_-_1248826_1248876 2.90 AT1G04570.2
AT1G04570.1
AT1G04570
Major facilitator superfamily protein
arTal_v1_Chr3_-_8085669_8085669 2.12 AT3G22840.1
ELIP1
Chlorophyll A-B binding family protein
arTal_v1_Chr5_+_17987591_17987591 1.93 AT5G44590.2
AT5G44590.1
AT5G44590
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr5_+_22467337_22467337 1.90 AT5G55450.1
AT5G55450
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr3_+_5705541_5705541 1.70 AT3G16770.1
EBP
ethylene-responsive element binding protein
arTal_v1_Chr5_-_18189523_18189523 1.66 AT5G45070.1
PP2-A8
phloem protein 2-A8
arTal_v1_Chr5_+_25328119_25328119 1.61 AT5G63140.1
PAP29
purple acid phosphatase 29
arTal_v1_Chr1_+_23740493_23740562 1.61 AT1G63980.1
AT1G63980.2
AT1G63980
D111/G-patch domain-containing protein
arTal_v1_Chr2_-_4007044_4007044 1.61 AT2G10410.1
SADHU1-1

arTal_v1_Chr4_-_16644928_16644928 1.56 AT4G34950.1
AT4G34950
Major facilitator superfamily protein
arTal_v1_Chr3_+_541708_541800 1.47 AT3G02560.1
AT3G02560.2
AT3G02560.3
AT3G02560
Ribosomal protein S7e family protein
arTal_v1_Chr4_+_994726_994726 1.46 AT4G02280.1
SUS3
sucrose synthase 3
arTal_v1_Chr3_+_7275645_7275706 1.43 AT3G20810.1
AT3G20810.4
AT3G20810.2
AT3G20810.5
AT3G20810.3
JMJD5
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr5_-_10070899_10070899 1.43 AT5G28060.1
AT5G28060
Ribosomal protein S24e family protein
arTal_v1_Chr5_+_23619459_23619459 1.39 AT5G58420.1
AT5G58420
Ribosomal protein S4 (RPS4A) family protein
arTal_v1_Chr5_+_25756272_25756272 1.39 AT5G64420.1
AT5G64420
DNA polymerase V family
arTal_v1_Chr3_-_19213709_19213776 1.38 AT3G51800.2
AT3G51800.1
AT3G51800.3
ATG2
metallopeptidase M24 family protein
arTal_v1_Chr5_+_5268421_5268421 1.38 AT5G16130.1
AT5G16130
Ribosomal protein S7e family protein
arTal_v1_Chr5_+_6687030_6687030 1.36 AT5G19780.1
TUA5
tubulin alpha-5
arTal_v1_Chr2_-_11764785_11764935 1.35 AT2G27530.2
AT2G27530.1
PGY1
Ribosomal protein L1p/L10e family
arTal_v1_Chr5_-_24984044_24984044 1.35 AT5G62190.1
PRH75
DEAD box RNA helicase (PRH75)
arTal_v1_Chr2_-_17461539_17461539 1.35 AT2G41840.1
AT2G41840
Ribosomal protein S5 family protein
arTal_v1_Chr2_+_7546440_7546480 1.33 AT2G17360.1
AT2G17360.2
AT2G17360
Ribosomal protein S4 (RPS4A) family protein
arTal_v1_Chr4_+_7453196_7453201 1.31 AT4G12600.1
AT4G12600.2
AT4G12600
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
arTal_v1_Chr3_+_20858742_20858825 1.31 AT3G56220.1
AT3G56220.2
AT3G56220
transcription regulator
arTal_v1_Chr3_-_9271400_9271465 1.29 AT3G25520.2
AT3G25520.3
AT3G25520.1
ATL5
ribosomal protein L5
arTal_v1_Chr4_-_6479165_6479171 1.26 AT4G10480.2
AT4G10480.1
AT4G10480
Nascent polypeptide-associated complex (NAC), alpha subunit family protein
arTal_v1_Chr3_-_15182664_15182664 1.26 AT3G43190.2
SUS4
sucrose synthase 4
arTal_v1_Chr5_+_22686832_22686832 1.26 AT5G56030.2
HSP81-2
heat shock protein 81-2
arTal_v1_Chr5_+_18791575_18791575 1.25 AT5G46330.1
AT5G46330.2
FLS2
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr5_+_22686473_22686473 1.25 AT5G56030.1
HSP81-2
heat shock protein 81-2
arTal_v1_Chr4_-_8243910_8243923 1.25 AT4G14320.2
AT4G14320.1
AT4G14320
Zinc-binding ribosomal protein family protein
arTal_v1_Chr3_-_6212551_6212551 1.25 AT3G18130.1
RACK1C_AT
receptor for activated C kinase 1C
arTal_v1_Chr3_-_2722624_2722624 1.23 AT3G08943.1
AT3G08943
ARM repeat superfamily protein
arTal_v1_Chr3_-_2825114_2825241 1.22 AT3G09200.2
AT3G09200.1
AT3G09200
Ribosomal protein L10 family protein
arTal_v1_Chr2_+_16474923_16474923 1.21 AT2G39460.1
RPL23AA
ribosomal protein L23AA
arTal_v1_Chr1_+_21868190_21868190 1.21 AT1G59530.1
bZIP4
basic leucine-zipper 4
arTal_v1_Chr3_+_1024144_1024144 1.21 AT3G03960.1
AT3G03960
TCP-1/cpn60 chaperonin family protein
arTal_v1_Chr1_+_19508938_19508952 1.21 AT1G52380.2
AT1G52380.1
AT1G52380.3
AT1G52380
NUP50 (Nucleoporin 50 kDa) protein
arTal_v1_Chr5_+_26416126_26416126 1.20 AT5G66052.1
AT5G66052
transmembrane protein
arTal_v1_Chr4_+_17512254_17512271 1.19 AT4G37210.1
AT4G37210.2
AT4G37210
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_-_7973995_7973995 1.18 AT5G23660.1
SWEET12
bidirectional sugar transporter SWEET12-like protein
arTal_v1_Chr2_-_7757875_7757929 1.18 AT2G17840.2
AT2G17840.1
ERD7
Senescence/dehydration-associated protein-like protein
arTal_v1_Chr1_-_1286619_1286619 1.18 AT1G04620.1
HCAR
coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family
arTal_v1_Chr2_+_16474149_16474149 1.18 AT2G39460.2
RPL23AA
ribosomal protein L23AA
arTal_v1_Chr2_-_15511607_15511607 1.17 AT2G36930.1
AT2G36930
zinc finger (C2H2 type) family protein
arTal_v1_Chr4_-_9935685_9935685 1.17 AT4G17880.1
MYC4
Basic helix-loop-helix (bHLH) DNA-binding family protein
arTal_v1_Chr4_+_16548600_16548600 1.17 AT4G34670.1
AT4G34670
Ribosomal protein S3Ae
arTal_v1_Chr3_-_7808046_7808046 1.16 AT3G22142.1
AT3G22142
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr4_+_15330993_15331140 1.16 AT4G31650.2
AT4G31650.1
AT4G31650
Transcriptional factor B3 family protein
arTal_v1_Chr5_-_6684744_6684744 1.14 AT5G19770.1
TUA3
tubulin alpha-3
arTal_v1_Chr4_-_10036647_10036647 1.13 AT4G18100.1
AT4G18100
Ribosomal protein L32e
arTal_v1_Chr4_+_15373988_15373999 1.13 AT4G31780.1
AT4G31780.3
AT4G31780.2
MGD1
monogalactosyl diacylglycerol synthase 1
arTal_v1_Chr3_-_17340543_17340543 1.12 AT3G47080.1
AT3G47080
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_-_2232361_2232361 1.12 AT3G07050.1
NSN1
GTP-binding family protein
arTal_v1_Chr5_-_21421715_21421715 1.12 AT5G52860.1
ABCG8
ABC-2 type transporter family protein
arTal_v1_Chr4_+_12264462_12264462 1.12 AT4G23500.1
AT4G23500
Pectin lyase-like superfamily protein
arTal_v1_Chr4_+_12317036_12317173 1.10 AT4G23630.1
AT4G23630.2
BTI1
VIRB2-interacting protein 1
arTal_v1_Chr2_+_12481664_12481664 1.09 AT2G29060.1
AT2G29060.2
AT2G29060
GRAS family transcription factor
arTal_v1_Chr1_-_6378580_6378580 1.09 AT1G18540.1
AT1G18540
Ribosomal protein L6 family protein
arTal_v1_Chr5_-_24815455_24815458 1.09 AT5G61760.1
AT5G61760.2
IPK2BETA
inositol polyphosphate kinase 2 beta
arTal_v1_Chr3_-_10011712_10011807 1.09 AT3G27150.2
AT3G27150.1
AT3G27150
Galactose oxidase/kelch repeat superfamily protein
arTal_v1_Chr5_+_642554_642554 1.09 AT5G02820.1
RHL2
Spo11/DNA topoisomerase VI, subunit A protein
arTal_v1_Chr1_-_638681_638681 1.07 AT1G02870.1
AT1G02870
nucleolar-like protein
arTal_v1_Chr3_+_6393747_6393747 1.07 AT3G18560.1
AT3G18560
hypothetical protein
arTal_v1_Chr5_-_22991530_22991530 1.07 AT5G56860.1
GNC
GATA type zinc finger transcription factor family protein
arTal_v1_Chr3_-_4358826_4358826 1.07 AT3G13403.1
AT3G13403
Defensin-like (DEFL) family protein
arTal_v1_Chr3_-_7844597_7844597 1.06 AT3G22230.1
AT3G22230
Ribosomal L27e protein family
arTal_v1_Chr1_+_16266553_16266773 1.06 AT1G43170.1
AT1G43170.5
AT1G43170.8
AT1G43170.7
AT1G43170.9
AT1G43170.6
AT1G43170.4
AT1G43170.2
AT1G43170.3
RP1
ribosomal protein 1
arTal_v1_Chr3_+_1329571_1329571 1.06 AT3G04840.1
AT3G04840
Ribosomal protein S3Ae
arTal_v1_Chr2_-_18250779_18250779 1.06 AT2G44120.2
AT2G44120
Ribosomal protein L30/L7 family protein
arTal_v1_Chr3_-_15184105_15184105 1.05 AT3G43190.1
SUS4
sucrose synthase 4
arTal_v1_Chr4_+_14004401_14004485 1.05 AT4G28260.1
AT4G28260.2
AT4G28260
acyl-UDP-N-acetylglucosamine O-acyltransferase
arTal_v1_Chr1_-_8855874_8855874 1.05 AT1G25260.1
AT1G25260
Ribosomal protein L10 family protein
arTal_v1_Chr2_-_16451878_16451878 1.05 AT2G39390.1
AT2G39390
Ribosomal L29 family protein
arTal_v1_Chr2_+_13450241_13450241 1.05 AT2G31610.1
AT2G31610
Ribosomal protein S3 family protein
arTal_v1_Chr1_+_2635939_2635939 1.04 AT1G08360.1
AT1G08360
Ribosomal protein L1p/L10e family
arTal_v1_Chr5_+_18850645_18850776 1.04 AT5G46490.3
AT5G46490.4
AT5G46490.5
AT5G46490.6
AT5G46490.7
AT5G46490.1
AT5G46490.8
AT5G46490.2
AT5G46490
Disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr3_+_20578922_20578922 1.04 AT3G55510.1
AT3G55510.2
RBL
Noc2p family
arTal_v1_Chr3_+_19648880_19648880 1.04 AT3G52990.2
AT3G52990
Pyruvate kinase family protein
arTal_v1_Chr5_-_24456115_24456115 1.03 AT5G60790.1
ABCF1
ABC transporter family protein
arTal_v1_Chr2_-_18251156_18251156 1.03 AT2G44120.1
AT2G44120
Ribosomal protein L30/L7 family protein
arTal_v1_Chr3_+_19648711_19648711 1.03 AT3G52990.1
AT3G52990
Pyruvate kinase family protein
arTal_v1_Chr3_-_4042075_4042075 1.02 AT3G12710.1
AT3G12710
DNA glycosylase superfamily protein
arTal_v1_Chr3_-_1624819_1624852 1.02 AT3G05600.2
AT3G05600.1
AT3G05600
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_+_23037018_23037018 1.01 AT3G62250.1
UBQ5
ubiquitin 5
arTal_v1_Chr5_+_15903279_15903315 1.00 AT5G39740.1
AT5G39740.2
RPL5B
ribosomal protein L5 B
arTal_v1_Chr5_+_2794388_2794388 1.00 AT5G08620.1
STRS2
DEA(D/H)-box RNA helicase family protein
arTal_v1_Chr5_+_21910471_21910471 1.00 AT5G53970.1
TAT7
Tyrosine transaminase family protein
arTal_v1_Chr3_-_21156075_21156075 0.97 AT3G57150.1
NAP57
homologue of NAP57
arTal_v1_Chr3_+_5454762_5454762 0.95 AT3G16080.1
AT3G16080.2
AT3G16080
Zinc-binding ribosomal protein family protein
arTal_v1_Chr5_-_24381599_24381599 0.95 AT5G60670.1
AT5G60670
Ribosomal protein L11 family protein
arTal_v1_Chr1_+_18870059_18870059 0.94 AT1G50920.1
AT1G50920
Nucleolar GTP-binding protein
arTal_v1_Chr1_+_19509241_19509241 0.94 AT1G52380.4
AT1G52380
NUP50 (Nucleoporin 50 kDa) protein
arTal_v1_Chr1_-_6153982_6153982 0.94 AT1G17880.1
BTF3
basic transcription factor 3
arTal_v1_Chr5_+_7328870_7328870 0.94 AT5G22100.1
AT5G22100
RNA cyclase family protein
arTal_v1_Chr1_+_6759859_6759965 0.94 AT1G19520.1
AT1G19520.2
NFD5
pentatricopeptide (PPR) repeat-containing protein
arTal_v1_Chr4_-_347191_347293 0.93 AT4G00810.1
AT4G00810.2
AT4G00810
60S acidic ribosomal protein family
arTal_v1_Chr4_-_857020_857020 0.93 AT4G01970.1
STS
stachyose synthase
arTal_v1_Chr4_-_6464544_6464558 0.93 AT4G10450.2
AT4G10450.1
AT4G10450
Ribosomal protein L6 family
arTal_v1_Chr5_+_19595536_19595536 0.93 AT5G48360.1
AT5G48360
Actin-binding FH2 (formin homology 2) family protein
arTal_v1_Chr4_-_12560944_12560974 0.92 AT4G24200.1
AT4G24200.2
AT4G24200
Transcription elongation factor (TFIIS) family protein
arTal_v1_Chr2_+_7190937_7190937 0.91 AT2G16586.1
AT2G16586
transmembrane protein
arTal_v1_Chr4_+_13177356_13177356 0.91 AT4G25960.1
ABCB2
P-glycoprotein 2
arTal_v1_Chr5_-_25022417_25022564 0.91 AT5G62300.2
AT5G62300.1
AT5G62300
Ribosomal protein S10p/S20e family protein
arTal_v1_Chr3_+_9064525_9064525 0.90 AT3G24830.1
AT3G24830
Ribosomal protein L13 family protein
arTal_v1_Chr2_-_16210428_16210428 0.90 AT2G38770.1
EMB2765
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr5_-_7456865_7456865 0.90 AT5G22480.1
AT5G22480
ZPR1 zinc-finger domain protein
arTal_v1_Chr1_-_27849008_27849008 0.90 AT1G74050.1
AT1G74050
Ribosomal protein L6 family protein
arTal_v1_Chr1_-_3610616_3610616 0.90 AT1G10840.1
TIF3H1
translation initiation factor 3 subunit H1
arTal_v1_Chr1_+_14158452_14158452 0.89 AT1G37130.1
NIA2
nitrate reductase 2
arTal_v1_Chr3_+_4544364_4544384 0.89 AT3G13810.5
AT3G13810.3
AT3G13810.4
AT3G13810.6
AT3G13810.2
AT3G13810.1
IDD11
indeterminate(ID)-domain 11
arTal_v1_Chr5_+_15208358_15208358 0.89 AT5G38110.1
ASF1B
anti- silencing function 1b
arTal_v1_Chr4_-_857401_857401 0.88 AT4G01970.2
STS
stachyose synthase
arTal_v1_Chr3_+_5008676_5008742 0.88 AT3G14890.1
AT3G14890.2
AT3G14890
phosphoesterase
arTal_v1_Chr3_+_20500234_20500402 0.88 AT3G55280.1
AT3G55280.3
AT3G55280.2
RPL23AB
ribosomal protein L23AB
arTal_v1_Chr1_-_27232996_27233167 0.88 AT1G72320.3
AT1G72320.2
AT1G72320.1
AT1G72320.4
PUM23
pumilio 23
arTal_v1_Chr5_+_21661444_21661444 0.88 AT5G53400.1
BOB1
HSP20-like chaperones superfamily protein
arTal_v1_Chr1_-_3610386_3610386 0.87 AT1G10840.2
TIF3H1
translation initiation factor 3 subunit H1
arTal_v1_Chr5_+_26732795_26732795 0.87 AT5G66950.1
AT5G66950
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
arTal_v1_Chr1_-_25710989_25710989 0.86 AT1G68520.1
BBX14
B-box type zinc finger protein with CCT domain-containing protein
arTal_v1_Chr1_+_3631_3631 0.86 AT1G01010.1
NAC001
NAC domain containing protein 1
arTal_v1_Chr2_+_19393584_19393584 0.86 AT2G47240.3
LACS1
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr1_+_4888114_4888214 0.86 AT1G14320.1
AT1G14320.2
SAC52
Ribosomal protein L16p/L10e family protein
arTal_v1_Chr1_+_23337167_23337167 0.86 AT1G62990.1
KNAT7
homeobox knotted-like protein
arTal_v1_Chr5_+_15895682_15895682 0.86 AT5G39710.1
EMB2745
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr2_+_19394106_19394106 0.85 AT2G47240.4
LACS1
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr4_-_545566_545566 0.85 AT4G01310.1
AT4G01310
Ribosomal L5P family protein
arTal_v1_Chr4_+_1274465_1274479 0.85 AT4G02880.2
AT4G02880.1
AT4G02880
ELKS/Rab6-interacting/CAST family protein
arTal_v1_Chr1_+_1096882_1096882 0.85 AT1G04170.1
AT1G04170.2
EIF2 GAMMA
eukaryotic translation initiation factor 2 gamma subunit
arTal_v1_Chr3_-_1192659_1192659 0.85 AT3G04470.1
AT3G04470
Ankyrin repeat family protein
arTal_v1_Chr3_+_7528181_7528181 0.85 AT3G21380.1
AT3G21380
Mannose-binding lectin superfamily protein
arTal_v1_Chr1_+_3453191_3453228 0.85 AT1G10490.1
AT1G10490.2
AT1G10490
GNAT acetyltransferase (DUF699)
arTal_v1_Chr1_+_21355475_21355475 0.85 AT1G57660.1
AT1G57660
Translation protein SH3-like family protein
arTal_v1_Chr3_+_21218981_21218981 0.84 AT3G57340.2
AT3G57340
DnaJ heat shock amino-terminal domain protein (DUF1977)
arTal_v1_Chr5_+_21607410_21607410 0.84 AT5G53280.1
PDV1
plastid division1
arTal_v1_Chr1_-_7310250_7310271 0.83 AT1G20960.2
AT1G20960.1
emb1507
U5 small nuclear ribonucleoprotein helicase
arTal_v1_Chr2_+_7837067_7837067 0.83 AT2G18020.1
EMB2296
Ribosomal protein L2 family
arTal_v1_Chr3_-_4970274_4970274 0.83 AT3G14800.2
AT3G14800

arTal_v1_Chr2_-_14131143_14131224 0.83 AT2G33340.3
AT2G33340.2
AT2G33340.1
MAC3B
MOS4-associated complex 3B
arTal_v1_Chr1_-_29002135_29002143 0.83 AT1G77180.1
AT1G77180.3
AT1G77180.2
SKIP
chromatin protein family
arTal_v1_Chr5_+_4533131_4533131 0.82 AT5G14050.1
AT5G14050
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr2_+_19392744_19392744 0.82 AT2G47240.2
LACS1
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr3_+_2723153_2723183 0.82 AT3G08947.1
AT3G08947.2
AT3G08947
ARM repeat superfamily protein
arTal_v1_Chr4_-_8016582_8016582 0.82 AT4G13840.1
AT4G13840
HXXXD-type acyl-transferase family protein
arTal_v1_Chr3_+_20698431_20698431 0.82 AT3G55750.1
AT3G55750
Ribosomal protein L35Ae family protein
arTal_v1_Chr2_-_15620156_15620156 0.82 AT2G37190.1
AT2G37190
Ribosomal protein L11 family protein
arTal_v1_Chr1_-_4855287_4855287 0.82 AT1G14200.1
AT1G14200
RING/U-box superfamily protein
arTal_v1_Chr3_+_21218751_21218751 0.81 AT3G57340.1
AT3G57340
DnaJ heat shock amino-terminal domain protein (DUF1977)
arTal_v1_Chr4_+_8637666_8637666 0.81 AT4G15130.1
CCT2
phosphorylcholine cytidylyltransferase2
arTal_v1_Chr1_+_23131928_23131928 0.81 AT1G62500.1
AT1G62500
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr3_+_5731519_5731519 0.81 AT3G16830.1
TPR2
TOPLESS-related 2
arTal_v1_Chr4_-_2481590_2481590 0.81 AT4G04890.2
PDF2
protodermal factor 2
arTal_v1_Chr2_-_16856771_16856771 0.81 AT2G40360.2
AT2G40360.1
AT2G40360
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_+_17798979_17798979 0.80 AT1G48210.5
AT1G48210.7
AT1G48210.4
AT1G48210.6
AT1G48210
Protein kinase superfamily protein
arTal_v1_Chr2_-_12646057_12646057 0.80 AT2G29550.1
TUB7
tubulin beta-7 chain
arTal_v1_Chr3_+_17510981_17510981 0.80 AT3G47510.1
AT3G47510
transmembrane protein
arTal_v1_Chr3_-_219104_219136 0.80 AT3G01550.2
AT3G01550.1
PPT2
phosphoenolpyruvate (pep)/phosphate translocator 2
arTal_v1_Chr1_-_9316880_9316880 0.80 AT1G26880.1
AT1G26880
Ribosomal protein L34e superfamily protein
arTal_v1_Chr1_+_17319119_17319119 0.80 AT1G47250.1
PAF2
20S proteasome alpha subunit F2
arTal_v1_Chr1_-_26621779_26621779 0.80 AT1G70600.1
AT1G70600
Ribosomal protein L18e/L15 superfamily protein
arTal_v1_Chr2_+_388055_388055 0.80 AT2G01860.1
EMB975
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_+_1684566_1684566 0.79 AT5G05640.1
AT5G05640
nucleoprotein-like protein
arTal_v1_Chr4_+_7019664_7019664 0.79 AT4G11630.1
AT4G11630
Ribosomal protein L19 family protein
arTal_v1_Chr5_+_9305479_9305479 0.79 AT5G26710.1
AT5G26710
Glutamyl/glutaminyl-tRNA synthetase, class Ic
arTal_v1_Chr5_-_4936408_4936429 0.79 AT5G15200.2
AT5G15200.1
AT5G15200
Ribosomal protein S4
arTal_v1_Chr1_+_29165170_29165170 0.79 AT1G77610.1
AT1G77610
EamA-like transporter family protein
arTal_v1_Chr1_-_12371554_12371554 0.79 AT1G34030.1
AT1G34030
Ribosomal protein S13/S18 family
arTal_v1_Chr2_+_19392497_19392497 0.78 AT2G47240.1
LACS1
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr1_+_584134_584260 0.78 AT1G02690.1
AT1G02690.2
IMPA-6
importin alpha isoform 6
arTal_v1_Chr3_+_8668772_8668772 0.78 AT3G23990.1
HSP60
heat shock protein 60
arTal_v1_Chr1_-_15652542_15652542 0.78 AT1G41880.2
AT1G41880.1
AT1G41880
Ribosomal protein L35Ae family protein
arTal_v1_Chr5_+_26041045_26041174 0.78 AT5G65170.1
AT5G65170.2
AT5G65170
VQ motif-containing protein
arTal_v1_Chr2_+_12484658_12484658 0.78 AT2G29065.1
AT2G29065
GRAS family transcription factor
arTal_v1_Chr3_+_7887276_7887286 0.77 AT3G22310.1
AT3G22310.2
PMH1
putative mitochondrial RNA helicase 1
arTal_v1_Chr3_+_22268688_22268688 0.77 AT3G60245.1
AT3G60245
Zinc-binding ribosomal protein family protein
arTal_v1_Chr4_+_8816922_8817032 0.77 AT4G15415.2
AT4G15415.3
AT4G15415.1
AT4G15415.4
AT4G15415.5
ATB' GAMMA
Protein phosphatase 2A regulatory B subunit family protein
arTal_v1_Chr4_-_2482447_2482447 0.77 AT4G04890.1
PDF2
protodermal factor 2
arTal_v1_Chr5_+_26861266_26861266 0.77 AT5G67330.1
NRAMP4
natural resistance associated macrophage protein 4
arTal_v1_Chr1_-_29778016_29778016 0.76 AT1G79150.1
AT1G79150
binding protein
arTal_v1_Chr1_-_10399873_10399873 0.76 AT1G29720.1
AT1G29720
Leucine-rich repeat transmembrane protein kinase
arTal_v1_Chr4_+_8571816_8571833 0.76 AT4G15000.1
AT4G15000.2
AT4G15000
Ribosomal L27e protein family
arTal_v1_Chr5_+_17007366_17007389 0.76 AT5G42540.1
AT5G42540.2
XRN2
exoribonuclease 2
arTal_v1_Chr1_-_28951655_28951655 0.76 AT1G77030.1
AT1G77030
putative DEAD-box ATP-dependent RNA helicase 29
arTal_v1_Chr3_+_18504164_18504164 0.76 AT3G49910.1
AT3G49910
Translation protein SH3-like family protein
arTal_v1_Chr1_-_9318277_9318277 0.76 AT1G26880.2
AT1G26880
Ribosomal protein L34e superfamily protein
arTal_v1_Chr2_+_19595529_19595640 0.76 AT2G47850.1
AT2G47850.4
AT2G47850.2
AT2G47850.3
AT2G47850
Zinc finger C-x8-C-x5-C-x3-H type family protein
arTal_v1_Chr4_-_16662549_16662549 0.76 AT4G34990.1
MYB32
myb domain protein 32
arTal_v1_Chr3_+_1261857_1261857 0.75 AT3G04650.1
AT3G04650
FAD/NAD(P)-binding oxidoreductase family protein
arTal_v1_Chr1_-_17892596_17892632 0.75 AT1G48410.3
AT1G48410.1
AT1G48410.2
AGO1
Stabilizer of iron transporter SufD / Polynucleotidyl transferase
arTal_v1_Chr2_+_11816634_11816634 0.75 AT2G27710.2
AT2G27710.4
AT2G27710.1
AT2G27710
60S acidic ribosomal protein family
arTal_v1_Chr3_-_15871256_15871256 0.75 AT3G44110.1
AT3G44110.2
J3
DNAJ homologue 3
arTal_v1_Chr1_+_1906963_1907060 0.75 AT1G06230.4
AT1G06230.3
AT1G06230.2
AT1G06230.1
GTE4
global transcription factor group E4
arTal_v1_Chr1_+_11359512_11359512 0.75 AT1G31730.1
AT1G31730
Adaptin family protein
arTal_v1_Chr5_+_9823513_9823513 0.75 AT5G27740.1
EMB2775
ATPase family associated with various cellular activities (AAA)
arTal_v1_Chr3_-_1254956_1254984 0.75 AT3G04610.4
AT3G04610.3
AT3G04610.1
AT3G04610.2
FLK
RNA-binding KH domain-containing protein
arTal_v1_Chr3_+_20244284_20244284 0.75 AT3G54680.1
AT3G54680
proteophosphoglycan-like protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G72740

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.7 GO:1990882 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.5 2.1 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.5 1.4 GO:1902534 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.4 1.3 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.4 14.5 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.4 2.5 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.4 1.6 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.4 1.1 GO:0071258 cellular response to gravity(GO:0071258)
0.4 1.5 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
0.4 1.5 GO:0030856 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.3 1.7 GO:0000393 spliceosomal conformational changes to generate catalytic conformation(GO:0000393)
0.3 3.7 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.3 0.9 GO:0048832 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.3 10.8 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.3 0.8 GO:0006424 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.3 0.8 GO:0015783 GDP-fucose transport(GO:0015783) UDP-glucose transport(GO:0015786)
0.3 1.0 GO:1902914 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.3 1.5 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.3 0.8 GO:0071763 nuclear membrane organization(GO:0071763)
0.3 0.8 GO:0000478 endonucleolytic cleavage involved in rRNA processing(GO:0000478)
0.3 2.8 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.2 0.7 GO:0033194 response to hydroperoxide(GO:0033194) response to methyl methanesulfonate(GO:0072702)
0.2 0.7 GO:0048451 petal formation(GO:0048451)
0.2 0.5 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.2 1.3 GO:0010587 miRNA catabolic process(GO:0010587)
0.2 1.1 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.2 0.7 GO:0030970 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.2 0.7 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.2 0.9 GO:0000472 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000447) endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000472) endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000480)
0.2 1.1 GO:0000706 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.2 0.6 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.2 0.8 GO:0000491 small nucleolar ribonucleoprotein complex assembly(GO:0000491)
0.2 0.6 GO:0048729 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.2 0.6 GO:0051447 negative regulation of meiotic nuclear division(GO:0045835) negative regulation of meiotic cell cycle(GO:0051447)
0.2 0.6 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.2 0.6 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.2 0.6 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.2 3.0 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.2 1.0 GO:0042550 photosystem I stabilization(GO:0042550)
0.2 0.8 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.2 0.8 GO:0015692 lead ion transport(GO:0015692)
0.2 0.8 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.2 1.9 GO:0010098 suspensor development(GO:0010098)
0.2 0.6 GO:1904031 positive regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045737) positive regulation of cyclin-dependent protein kinase activity(GO:1904031)
0.2 0.5 GO:0010377 guard cell fate commitment(GO:0010377) regulation of G1/S transition of mitotic cell cycle(GO:2000045) regulation of genetic imprinting(GO:2000653)
0.2 0.5 GO:0006056 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506) response to cobalt ion(GO:0032025)
0.2 1.1 GO:1902326 glucose mediated signaling pathway(GO:0010255) positive regulation of chlorophyll biosynthetic process(GO:1902326)
0.2 0.9 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.2 1.0 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.2 0.7 GO:1901562 response to paraquat(GO:1901562)
0.2 0.2 GO:0051101 regulation of DNA binding(GO:0051101)
0.2 1.6 GO:0010264 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.2 0.6 GO:0043954 cellular component maintenance(GO:0043954) chromatin maintenance(GO:0070827)
0.2 1.0 GO:0006821 chloride transport(GO:0006821)
0.2 0.5 GO:1903312 negative regulation of mRNA 3'-end processing(GO:0031441) negative regulation of mRNA processing(GO:0050686) negative regulation of mRNA polyadenylation(GO:1900364) negative regulation of mRNA metabolic process(GO:1903312)
0.2 0.5 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.2 1.3 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.2 0.5 GO:0071486 cellular response to high light intensity(GO:0071486)
0.2 0.2 GO:0061014 positive regulation of mRNA catabolic process(GO:0061014)
0.2 0.6 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.1 0.9 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.1 0.4 GO:0002188 translation reinitiation(GO:0002188)
0.1 0.6 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.1 0.7 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.1 2.0 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.1 0.6 GO:0030656 regulation of vitamin metabolic process(GO:0030656) regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.1 0.8 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.1 0.8 GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process(GO:0006207)
0.1 0.7 GO:0080009 mRNA methylation(GO:0080009)
0.1 1.9 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.1 0.5 GO:0035865 cellular response to potassium ion(GO:0035865)
0.1 0.8 GO:0016444 somatic cell DNA recombination(GO:0016444)
0.1 2.4 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.1 0.3 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.1 0.5 GO:0071452 cellular response to singlet oxygen(GO:0071452)
0.1 0.8 GO:0043981 histone H4-K5 acetylation(GO:0043981)
0.1 7.8 GO:0042274 ribosomal small subunit biogenesis(GO:0042274)
0.1 0.6 GO:0080121 AMP transport(GO:0080121)
0.1 0.8 GO:0040023 nuclear migration(GO:0007097) establishment of nucleus localization(GO:0040023) nucleus localization(GO:0051647)
0.1 0.4 GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.1 1.0 GO:0006570 tyrosine metabolic process(GO:0006570)
0.1 0.4 GO:0040014 regulation of multicellular organism growth(GO:0040014) sepal giant cell differentiation(GO:0090392) regulation of adaxial/abaxial pattern formation(GO:2000011)
0.1 5.3 GO:0009682 induced systemic resistance(GO:0009682)
0.1 0.5 GO:0035308 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.1 1.1 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.1 1.0 GO:0016045 detection of bacterium(GO:0016045)
0.1 0.4 GO:0009211 deoxyribonucleoside triphosphate catabolic process(GO:0009204) pyrimidine deoxyribonucleoside triphosphate metabolic process(GO:0009211) pyrimidine deoxyribonucleotide metabolic process(GO:0009219) pyrimidine deoxyribonucleotide biosynthetic process(GO:0009221) 2'-deoxyribonucleotide biosynthetic process(GO:0009265) deoxyribose phosphate biosynthetic process(GO:0046385) deoxyribose phosphate catabolic process(GO:0046386)
0.1 0.3 GO:0048863 stem cell differentiation(GO:0048863)
0.1 0.6 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 1.0 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.1 0.7 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.1 0.4 GO:0009139 UDP biosynthetic process(GO:0006225) nucleoside diphosphate biosynthetic process(GO:0009133) pyrimidine nucleoside diphosphate metabolic process(GO:0009138) pyrimidine nucleoside diphosphate biosynthetic process(GO:0009139) ribonucleoside diphosphate biosynthetic process(GO:0009188) pyrimidine ribonucleoside diphosphate metabolic process(GO:0009193) pyrimidine ribonucleoside diphosphate biosynthetic process(GO:0009194) UDP metabolic process(GO:0046048)
0.1 1.4 GO:0008214 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.1 0.4 GO:0009557 antipodal cell differentiation(GO:0009557)
0.1 0.6 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.1 1.0 GO:0007105 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.1 1.1 GO:0031539 positive regulation of anthocyanin metabolic process(GO:0031539)
0.1 0.3 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.1 0.4 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 0.4 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.1 0.4 GO:0016598 protein arginylation(GO:0016598)
0.1 3.9 GO:0006606 protein import into nucleus(GO:0006606) protein targeting to nucleus(GO:0044744)
0.1 0.2 GO:0034724 DNA replication-independent nucleosome organization(GO:0034724)
0.1 0.3 GO:0055047 generative cell mitosis(GO:0055047)
0.1 0.5 GO:0010338 leaf formation(GO:0010338)
0.1 1.8 GO:0060429 epithelium development(GO:0060429)
0.1 0.8 GO:0006089 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.1 0.7 GO:0071731 response to nitric oxide(GO:0071731)
0.1 2.4 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 0.3 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.1 0.2 GO:0007021 tubulin complex assembly(GO:0007021)
0.1 4.0 GO:0002181 cytoplasmic translation(GO:0002181)
0.1 0.8 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.1 0.8 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.1 0.3 GO:0071484 cellular response to light intensity(GO:0071484)
0.1 1.4 GO:0051050 positive regulation of transport(GO:0051050)
0.1 0.3 GO:0031087 nuclear-transcribed mRNA catabolic process, deadenylation-independent decay(GO:0031086) deadenylation-independent decapping of nuclear-transcribed mRNA(GO:0031087)
0.1 0.7 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 0.3 GO:0080005 photosystem stoichiometry adjustment(GO:0080005)
0.1 0.7 GO:0043489 RNA stabilization(GO:0043489)
0.1 0.6 GO:0016926 protein desumoylation(GO:0016926)
0.1 0.5 GO:0006379 mRNA cleavage(GO:0006379)
0.1 0.2 GO:1905182 regulation of urease activity(GO:1905181) positive regulation of urease activity(GO:1905182)
0.1 0.7 GO:0034508 centromere complex assembly(GO:0034508)
0.1 2.7 GO:0010143 cutin biosynthetic process(GO:0010143)
0.1 1.1 GO:0043248 proteasome assembly(GO:0043248)
0.1 0.6 GO:0019079 viral genome replication(GO:0019079)
0.1 3.3 GO:0010286 heat acclimation(GO:0010286)
0.1 0.4 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.1 3.6 GO:0040034 regulation of development, heterochronic(GO:0040034)
0.1 0.8 GO:0043462 regulation of ATPase activity(GO:0043462)
0.1 2.2 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.1 0.4 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.1 0.2 GO:0051194 positive regulation of cofactor metabolic process(GO:0051194) positive regulation of tetrapyrrole metabolic process(GO:1901403)
0.1 1.5 GO:0010229 inflorescence development(GO:0010229)
0.1 0.7 GO:0045824 negative regulation of innate immune response(GO:0045824)
0.1 0.4 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 1.2 GO:0010555 response to mannitol(GO:0010555)
0.1 0.3 GO:0015739 sialic acid transport(GO:0015739)
0.1 0.2 GO:0009945 radial axis specification(GO:0009945)
0.1 0.7 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.1 1.0 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.1 0.3 GO:0060261 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.1 0.6 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.1 0.3 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.1 27.1 GO:0006412 translation(GO:0006412)
0.1 0.3 GO:0048480 style development(GO:0048479) stigma development(GO:0048480)
0.1 0.8 GO:0006265 DNA topological change(GO:0006265)
0.1 1.5 GO:0051260 protein homooligomerization(GO:0051260)
0.1 0.6 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.2 GO:0034762 regulation of transmembrane transport(GO:0034762) regulation of ion transmembrane transport(GO:0034765)
0.1 1.4 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 0.4 GO:2001022 positive regulation of response to DNA damage stimulus(GO:2001022)
0.1 0.2 GO:0045046 protein import into peroxisome membrane(GO:0045046)
0.1 0.3 GO:0018874 benzoate metabolic process(GO:0018874)
0.1 1.2 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 0.2 GO:0048530 fruit morphogenesis(GO:0048530)
0.1 0.5 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 0.7 GO:0048766 root hair initiation(GO:0048766)
0.1 0.2 GO:0090548 response to nitrate starvation(GO:0090548)
0.1 1.7 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.1 0.4 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.1 0.4 GO:0010306 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.7 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.1 GO:0043970 histone H3-K9 acetylation(GO:0043970)
0.0 0.3 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.0 1.1 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.3 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.0 0.4 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 3.0 GO:0006096 glycolytic process(GO:0006096) ATP generation from ADP(GO:0006757) purine nucleoside diphosphate metabolic process(GO:0009135) purine ribonucleoside diphosphate metabolic process(GO:0009179) ribonucleoside diphosphate metabolic process(GO:0009185) ADP metabolic process(GO:0046031)
0.0 1.3 GO:0006284 base-excision repair(GO:0006284)
0.0 0.3 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.0 1.3 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.5 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.6 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 2.4 GO:0005985 sucrose metabolic process(GO:0005985)
0.0 0.1 GO:0034063 stress granule assembly(GO:0034063)
0.0 0.4 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.0 1.1 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 1.4 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.8 GO:0007602 phototransduction(GO:0007602) red, far-red light phototransduction(GO:0009585)
0.0 0.1 GO:0045815 positive regulation of gene expression, epigenetic(GO:0045815)
0.0 0.3 GO:0043410 positive regulation of MAPK cascade(GO:0043410)
0.0 0.2 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.6 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.0 0.4 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.7 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.0 0.1 GO:0010269 response to selenium ion(GO:0010269)
0.0 0.3 GO:0032844 regulation of telomere maintenance(GO:0032204) regulation of homeostatic process(GO:0032844)
0.0 0.8 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.2 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.0 0.6 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.0 0.5 GO:0007020 microtubule nucleation(GO:0007020)
0.0 0.2 GO:0006598 polyamine catabolic process(GO:0006598)
0.0 0.2 GO:1901984 negative regulation of histone modification(GO:0031057) negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.0 1.0 GO:0006334 nucleosome assembly(GO:0006334)
0.0 0.6 GO:0043044 ATP-dependent chromatin remodeling(GO:0043044)
0.0 0.9 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.2 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.0 0.5 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.0 0.3 GO:0016554 base conversion or substitution editing(GO:0016553) cytidine to uridine editing(GO:0016554)
0.0 0.8 GO:0006614 cotranslational protein targeting to membrane(GO:0006613) SRP-dependent cotranslational protein targeting to membrane(GO:0006614)
0.0 0.2 GO:0090114 COPII-coated vesicle budding(GO:0090114)
0.0 0.3 GO:0009750 response to fructose(GO:0009750)
0.0 0.5 GO:0051788 response to misfolded protein(GO:0051788)
0.0 4.0 GO:0048511 circadian rhythm(GO:0007623) rhythmic process(GO:0048511)
0.0 2.2 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.7 GO:0034243 regulation of transcription elongation from RNA polymerase II promoter(GO:0034243)
0.0 0.2 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.0 0.4 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.5 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.0 1.2 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.1 GO:0000919 cell plate assembly(GO:0000919)
0.0 2.5 GO:0018209 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.0 0.3 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.5 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.0 0.8 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 0.5 GO:0007062 sister chromatid cohesion(GO:0007062)
0.0 1.6 GO:0009561 megagametogenesis(GO:0009561)
0.0 0.5 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.1 GO:0035461 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.0 3.2 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.0 0.3 GO:0060321 acceptance of pollen(GO:0060321)
0.0 1.9 GO:0009734 auxin-activated signaling pathway(GO:0009734)
0.0 0.2 GO:0046621 negative regulation of organ growth(GO:0046621)
0.0 0.1 GO:0010226 response to lithium ion(GO:0010226)
0.0 0.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.2 GO:0006882 cellular zinc ion homeostasis(GO:0006882)
0.0 0.4 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.0 0.3 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.0 2.0 GO:0042254 ribosome biogenesis(GO:0042254)
0.0 0.7 GO:0032880 regulation of protein localization(GO:0032880)
0.0 0.3 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.0 0.7 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.4 GO:0009206 purine nucleoside triphosphate biosynthetic process(GO:0009145) purine ribonucleoside triphosphate biosynthetic process(GO:0009206)
0.0 0.4 GO:0006612 protein targeting to membrane(GO:0006612)
0.0 3.0 GO:0007017 microtubule-based process(GO:0007017)
0.0 0.1 GO:0033206 meiotic cytokinesis(GO:0033206)
0.0 0.1 GO:0045740 positive regulation of DNA replication(GO:0045740)
0.0 0.6 GO:0032984 macromolecular complex disassembly(GO:0032984)
0.0 0.9 GO:0008037 cell recognition(GO:0008037) recognition of pollen(GO:0048544)
0.0 0.1 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.0 0.3 GO:0006862 nucleotide transport(GO:0006862)
0.0 0.5 GO:0010449 root meristem growth(GO:0010449)
0.0 0.1 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.0 0.6 GO:0071805 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.0 0.3 GO:0010214 seed coat development(GO:0010214)
0.0 0.4 GO:0006289 nucleotide-excision repair(GO:0006289)
0.0 0.1 GO:0016558 protein import into peroxisome matrix(GO:0016558)
0.0 0.2 GO:0006384 transcription initiation from RNA polymerase III promoter(GO:0006384)
0.0 0.0 GO:0010219 regulation of vernalization response(GO:0010219)
0.0 0.3 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 0.2 GO:1905037 autophagosome assembly(GO:0000045) autophagosome organization(GO:1905037)
0.0 0.6 GO:0034976 response to endoplasmic reticulum stress(GO:0034976)
0.0 0.3 GO:0007030 Golgi organization(GO:0007030)
0.0 0.1 GO:1903051 mitotic spindle assembly checkpoint(GO:0007094) spindle checkpoint(GO:0031577) negative regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032435) negative regulation of sister chromatid segregation(GO:0033046) negative regulation of mitotic sister chromatid segregation(GO:0033048) negative regulation of mitotic metaphase/anaphase transition(GO:0045841) negative regulation of chromosome segregation(GO:0051985) spindle assembly checkpoint(GO:0071173) mitotic spindle checkpoint(GO:0071174) negative regulation of proteasomal protein catabolic process(GO:1901799) negative regulation of metaphase/anaphase transition of cell cycle(GO:1902100) negative regulation of proteolysis involved in cellular protein catabolic process(GO:1903051) negative regulation of cellular protein catabolic process(GO:1903363) negative regulation of mitotic sister chromatid separation(GO:2000816)
0.0 0.6 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.1 GO:0006986 response to unfolded protein(GO:0006986) cellular response to unfolded protein(GO:0034620)
0.0 0.2 GO:0048768 root hair cell tip growth(GO:0048768)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.7 GO:0042788 polysomal ribosome(GO:0042788)
0.5 5.0 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.4 1.2 GO:0034457 Mpp10 complex(GO:0034457)
0.4 1.6 GO:0034719 SMN-Sm protein complex(GO:0034719)
0.4 1.2 GO:0030689 Noc complex(GO:0030689)
0.4 1.9 GO:0031429 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.3 39.0 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.3 3.3 GO:0045298 tubulin complex(GO:0045298)
0.3 1.3 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.2 23.4 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.2 1.3 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.2 1.1 GO:0000812 Swr1 complex(GO:0000812)
0.2 1.5 GO:0071006 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.2 1.8 GO:0016272 prefoldin complex(GO:0016272)
0.2 1.9 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.2 0.5 GO:0005732 small nucleolar ribonucleoprotein complex(GO:0005732)
0.2 9.1 GO:0009707 chloroplast outer membrane(GO:0009707)
0.2 0.5 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.2 1.1 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.2 0.5 GO:0097361 CIA complex(GO:0097361)
0.1 1.0 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 0.7 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.1 0.6 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.1 1.2 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 0.4 GO:0070847 core mediator complex(GO:0070847)
0.1 0.7 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.1 1.1 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.1 0.5 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.1 1.1 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.1 1.2 GO:0005682 U5 snRNP(GO:0005682)
0.1 1.6 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.1 0.8 GO:0032153 cell division site(GO:0032153)
0.1 0.7 GO:0044545 NSL complex(GO:0044545)
0.1 1.9 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.1 0.7 GO:0015030 Cajal body(GO:0015030)
0.1 0.7 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.1 0.1 GO:0000439 core TFIIH complex(GO:0000439)
0.1 0.8 GO:0005844 polysome(GO:0005844)
0.1 1.5 GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.1 0.4 GO:0043614 multi-eIF complex(GO:0043614)
0.1 0.8 GO:0005663 DNA replication factor C complex(GO:0005663)
0.1 2.9 GO:0005643 nuclear pore(GO:0005643)
0.1 1.3 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.1 0.9 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.1 1.3 GO:0022624 proteasome regulatory particle(GO:0005838) proteasome accessory complex(GO:0022624)
0.1 0.9 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.1 1.7 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 0.2 GO:0005846 nuclear cap binding complex(GO:0005846)
0.1 0.3 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.1 0.5 GO:0016363 nuclear matrix(GO:0016363)
0.1 0.4 GO:0030141 secretory granule(GO:0030141)
0.1 5.0 GO:0005819 spindle(GO:0005819)
0.1 1.1 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.1 0.8 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.1 0.5 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.1 0.7 GO:0042555 MCM complex(GO:0042555)
0.1 21.6 GO:0005730 nucleolus(GO:0005730)
0.1 1.0 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.1 0.4 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.1 0.3 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.4 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.1 0.2 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.1 0.6 GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261)
0.1 0.3 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.1 0.2 GO:0005775 vacuolar lumen(GO:0005775)
0.1 0.5 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 1.5 GO:0071013 catalytic step 2 spliceosome(GO:0071013)
0.0 0.6 GO:0030131 clathrin adaptor complex(GO:0030131)
0.0 1.7 GO:1902554 serine/threonine protein kinase complex(GO:1902554)
0.0 0.6 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 0.9 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.3 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 0.6 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.1 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.7 GO:0008023 transcription elongation factor complex(GO:0008023)
0.0 0.3 GO:0000124 SAGA complex(GO:0000124)
0.0 0.8 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 3.4 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.3 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.0 2.3 GO:0016604 nuclear body(GO:0016604)
0.0 0.2 GO:0000796 condensin complex(GO:0000796)
0.0 0.8 GO:0030981 cortical microtubule cytoskeleton(GO:0030981)
0.0 0.2 GO:0030127 COPII vesicle coat(GO:0030127)
0.0 0.5 GO:0009986 cell surface(GO:0009986)
0.0 0.2 GO:0030139 endocytic vesicle(GO:0030139)
0.0 0.4 GO:0000775 chromosome, centromeric region(GO:0000775)
0.0 0.3 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.0 0.9 GO:0005635 nuclear envelope(GO:0005635)
0.0 0.6 GO:0034708 methyltransferase complex(GO:0034708)
0.0 0.8 GO:0016592 mediator complex(GO:0016592)
0.0 0.5 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 1.5 GO:0005667 transcription factor complex(GO:0005667)
0.0 0.1 GO:0000783 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.0 0.2 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.4 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.5 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.3 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 0.8 GO:0022626 cytosolic ribosome(GO:0022626)
0.0 0.6 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 1.7 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 1.2 GO:0015630 microtubule cytoskeleton(GO:0015630)
0.0 0.9 GO:0000228 nuclear chromosome(GO:0000228)
0.0 1.1 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.1 GO:0071818 BAT3 complex(GO:0071818)
0.0 1.3 GO:0042025 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 2.7 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.0 0.2 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.1 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.5 GO:0005080 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.7 3.3 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.6 1.7 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.5 1.6 GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725)
0.5 1.9 GO:0046481 digalactosyldiacylglycerol synthase activity(GO:0046481)
0.4 1.2 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.4 1.2 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.4 2.2 GO:0030544 Hsp70 protein binding(GO:0030544)
0.3 1.3 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.3 1.0 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.3 1.0 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.3 1.5 GO:0042879 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.3 0.9 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.3 3.3 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.3 0.8 GO:0008311 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.3 0.8 GO:0050997 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.3 4.5 GO:0016157 sucrose synthase activity(GO:0016157)
0.3 0.8 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.3 1.8 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.2 5.0 GO:0030515 snoRNA binding(GO:0030515)
0.2 0.7 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.2 1.6 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.2 0.7 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.2 1.1 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.2 1.1 GO:0003680 AT DNA binding(GO:0003680)
0.2 0.7 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.2 3.2 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.2 0.8 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.2 0.6 GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575)
0.2 0.5 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.2 0.5 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.2 2.1 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.2 1.4 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.2 2.4 GO:0008097 5S rRNA binding(GO:0008097)
0.2 1.0 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.2 0.7 GO:0070140 ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.2 1.6 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.2 0.5 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.2 0.2 GO:0000386 second spliceosomal transesterification activity(GO:0000386)
0.2 36.4 GO:0003735 structural constituent of ribosome(GO:0003735)
0.2 0.5 GO:0001054 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.2 0.6 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.1 0.4 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.1 0.6 GO:0000035 acyl binding(GO:0000035)
0.1 0.6 GO:0097617 annealing activity(GO:0097617)
0.1 2.3 GO:0070122 isopeptidase activity(GO:0070122)
0.1 2.1 GO:0031420 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.1 1.0 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 0.7 GO:0035197 siRNA binding(GO:0035197)
0.1 2.1 GO:0008536 Ran GTPase binding(GO:0008536)
0.1 0.4 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.1 0.4 GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity(GO:0008534)
0.1 0.8 GO:0019843 rRNA binding(GO:0019843)
0.1 0.7 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.1 0.8 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.1 0.6 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.1 1.3 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 0.7 GO:0022829 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.1 0.7 GO:0016841 ammonia-lyase activity(GO:0016841)
0.1 0.7 GO:0046972 histone acetyltransferase activity (H4-K8 specific)(GO:0043996) histone acetyltransferase activity (H4-K16 specific)(GO:0046972)
0.1 0.3 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 0.5 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.1 0.4 GO:0033862 UMP kinase activity(GO:0033862)
0.1 0.3 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.1 0.5 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.1 0.6 GO:0017070 U6 snRNA binding(GO:0017070)
0.1 0.4 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.1 0.4 GO:0004057 arginyltransferase activity(GO:0004057)
0.1 0.4 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.1 0.7 GO:0048487 beta-tubulin binding(GO:0048487)
0.1 0.3 GO:0043140 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.1 3.1 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.8 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.1 0.5 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.1 0.3 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.1 0.5 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.1 1.0 GO:0010997 anaphase-promoting complex binding(GO:0010997)
0.1 2.9 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.1 2.1 GO:0008143 poly(A) binding(GO:0008143)
0.1 0.4 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.3 GO:0001006 polymerase III regulatory region sequence-specific DNA binding(GO:0000992) RNA polymerase III type 3 promoter sequence-specific DNA binding(GO:0001006) RNA polymerase III regulatory region DNA binding(GO:0001016) RNA polymerase III type 3 promoter DNA binding(GO:0001032)
0.1 0.8 GO:0036002 pre-mRNA binding(GO:0036002)
0.1 5.0 GO:0043621 protein self-association(GO:0043621)
0.1 0.2 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 0.6 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.1 0.9 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.1 0.5 GO:0043015 gamma-tubulin binding(GO:0043015)
0.1 0.4 GO:0008251 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.1 0.5 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.3 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.1 0.7 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 0.4 GO:0043142 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.1 1.2 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 0.3 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.1 1.4 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.1 0.3 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 1.2 GO:0051117 ATPase binding(GO:0051117)
0.1 1.6 GO:0031386 protein tag(GO:0031386)
0.1 1.1 GO:0031369 translation initiation factor binding(GO:0031369)
0.1 5.3 GO:0051082 unfolded protein binding(GO:0051082)
0.1 0.3 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.1 0.6 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 1.3 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 0.7 GO:0003746 translation elongation factor activity(GO:0003746)
0.1 0.2 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.1 0.7 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.1 0.3 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 0.1 GO:0043995 histone acetyltransferase activity (H4-K5 specific)(GO:0043995)
0.1 1.3 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.1 0.7 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.1 0.2 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.1 4.0 GO:0042393 histone binding(GO:0042393)
0.1 0.7 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 4.0 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.7 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.0 2.3 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.3 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.7 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 1.7 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 2.4 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.4 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.3 GO:0004849 uridine kinase activity(GO:0004849)
0.0 0.7 GO:0043022 ribosome binding(GO:0043022)
0.0 0.7 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.8 GO:0008187 poly-pyrimidine tract binding(GO:0008187) poly(U) RNA binding(GO:0008266)
0.0 0.6 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.6 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.2 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.0 28.9 GO:0003729 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.0 0.5 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.0 0.3 GO:0019137 thioglucosidase activity(GO:0019137)
0.0 0.2 GO:0016151 nickel cation binding(GO:0016151)
0.0 0.8 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.3 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.0 0.2 GO:0000339 RNA cap binding(GO:0000339)
0.0 1.3 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds(GO:0016799)
0.0 0.2 GO:0008312 7S RNA binding(GO:0008312)
0.0 0.6 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.2 GO:0051139 calcium:proton antiporter activity(GO:0015369) metal ion:proton antiporter activity(GO:0051139)
0.0 0.3 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.2 GO:0046592 polyamine oxidase activity(GO:0046592)
0.0 0.5 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.1 GO:0042577 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.0 0.4 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.7 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 1.0 GO:0033558 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.0 0.3 GO:0008235 metalloexopeptidase activity(GO:0008235)
0.0 1.6 GO:0010857 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.5 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.2 GO:0051185 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.0 0.2 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085) protein C-terminus binding(GO:0008022)
0.0 0.4 GO:0005048 signal sequence binding(GO:0005048)
0.0 0.6 GO:0016780 phosphotransferase activity, for other substituted phosphate groups(GO:0016780)
0.0 0.1 GO:0090422 thiamine pyrophosphate transporter activity(GO:0090422) azole transmembrane transporter activity(GO:1901474)
0.0 0.3 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 0.4 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 1.6 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.0 0.5 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.5 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.0 0.1 GO:0001671 ATPase activator activity(GO:0001671)
0.0 1.0 GO:0022884 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.0 0.4 GO:0019905 syntaxin binding(GO:0019905)
0.0 7.7 GO:0003723 RNA binding(GO:0003723)
0.0 0.6 GO:0044389 ubiquitin-like protein ligase binding(GO:0044389)
0.0 0.3 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 0.1 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.0 0.3 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.3 GO:0043138 3'-5' DNA helicase activity(GO:0043138)
0.0 0.5 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.0 0.1 GO:0008430 selenium binding(GO:0008430)
0.0 0.2 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.6 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.8 GO:0019888 protein phosphatase regulator activity(GO:0019888)
0.0 1.9 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.7 GO:0003712 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 1.1 GO:0005525 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 0.4 GO:0008094 DNA-dependent ATPase activity(GO:0008094)
0.0 1.3 GO:0019900 kinase binding(GO:0019900)
0.0 0.1 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 2.5 GO:0008289 lipid binding(GO:0008289)
0.0 0.9 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.1 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.4 GO:0051540 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.0 0.3 GO:0003684 damaged DNA binding(GO:0003684)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.1 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.6 0.6 PID RAS PATHWAY Regulation of Ras family activation
0.3 1.0 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.2 0.8 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network
0.2 0.4 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.2 1.0 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I
0.1 0.3 PID BCR 5PATHWAY BCR signaling pathway
0.1 0.3 ST INTEGRIN SIGNALING PATHWAY Integrin Signaling Pathway
0.1 0.5 PID PLK1 PATHWAY PLK1 signaling events
0.1 0.4 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.0 0.1 PID AVB3 OPN PATHWAY Osteopontin-mediated events
0.0 0.1 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 4.1 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.6 1.8 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.3 1.0 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.3 1.0 REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION Genes involved in Cyclin E associated events during G1/S transition
0.2 0.6 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.2 0.8 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.2 1.1 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.2 1.2 REACTOME PROTEIN FOLDING Genes involved in Protein folding
0.2 0.7 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.2 0.6 REACTOME INTEGRIN ALPHAIIB BETA3 SIGNALING Genes involved in Integrin alphaIIb beta3 signaling
0.2 0.5 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.1 0.7 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.1 0.7 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.7 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.1 0.9 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.1 1.6 REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS Genes involved in Metabolism of lipids and lipoproteins
0.1 0.4 REACTOME RESOLUTION OF AP SITES VIA THE MULTIPLE NUCLEOTIDE PATCH REPLACEMENT PATHWAY Genes involved in Resolution of AP sites via the multiple-nucleotide patch replacement pathway
0.0 0.6 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.1 REACTOME INTEGRIN CELL SURFACE INTERACTIONS Genes involved in Integrin cell surface interactions
0.0 1.0 REACTOME 3 UTR MEDIATED TRANSLATIONAL REGULATION Genes involved in 3' -UTR-mediated translational regulation