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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G01940

Z-value: 0.54

Transcription factors associated with AT2G01940

Gene Symbol Gene ID Gene Info
AT2G01940
AT2G01940 C2H2-like zinc finger protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
SGR5arTal_v1_Chr2_+_432195_4322750.797.0e-04Click!

Activity profile of AT2G01940 motif

Sorted Z-values of AT2G01940 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr3_-_7796310_7796460 0.69 AT3G22120.1
AT3G22120.2
CWLP
cell wall-plasma membrane linker protein
arTal_v1_Chr4_-_18472048_18472048 0.52 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
arTal_v1_Chr1_+_3093644_3093644 0.52 AT1G09560.1
GLP5
germin-like protein 5
arTal_v1_Chr4_+_8646150_8646150 0.49 AT4G15160.2
AT4G15160.1
AT4G15160
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr3_-_10599042_10599042 0.45 AT3G28345.1
ABCB15
ABC transporter family protein
arTal_v1_Chr4_-_6479165_6479171 0.43 AT4G10480.2
AT4G10480.1
AT4G10480
Nascent polypeptide-associated complex (NAC), alpha subunit family protein
arTal_v1_Chr5_-_23301689_23301689 0.43 AT5G57530.1
XTH12
xyloglucan endotransglucosylase/hydrolase 12
arTal_v1_Chr5_+_3347381_3347437 0.42 AT5G10580.3
AT5G10580.4
AT5G10580.1
AT5G10580.2
AT5G10580
plant/protein (Protein of unknown function, DUF599)
arTal_v1_Chr5_-_10070899_10070899 0.41 AT5G28060.1
AT5G28060
Ribosomal protein S24e family protein
arTal_v1_Chr4_-_8794433_8794442 0.41 AT4G15390.1
AT4G15390.2
AT4G15390
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_+_903470_903472 0.41 AT5G03570.1
AT5G03570.3
IREG2
iron regulated 2
arTal_v1_Chr1_-_20156520_20156520 0.39 AT1G54000.1
GLL22
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr4_+_5244865_5244865 0.39 AT4G08300.1
UMAMIT17
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr4_-_9583290_9583290 0.37 AT4G17030.1
EXLB1
expansin-like B1
arTal_v1_Chr3_+_1024144_1024144 0.37 AT3G03960.1
AT3G03960
TCP-1/cpn60 chaperonin family protein
arTal_v1_Chr5_-_18679191_18679191 0.37 AT5G46050.1
PTR3
peptide transporter 3
arTal_v1_Chr2_-_394184_394184 0.36 AT2G01880.1
PAP7
purple acid phosphatase 7
arTal_v1_Chr5_-_26517599_26517599 0.35 AT5G66390.1
AT5G66390
Peroxidase superfamily protein
arTal_v1_Chr4_+_10521259_10521379 0.34 AT4G19230.1
AT4G19230.2
CYP707A1
cytochrome P450, family 707, subfamily A, polypeptide 1
arTal_v1_Chr1_-_29064637_29064637 0.33 AT1G77330.1
AT1G77330
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr1_+_18198227_18198227 0.33 AT1G49200.1
AT1G49200
RING/U-box superfamily protein
arTal_v1_Chr3_+_11810726_11810726 0.33 AT3G30180.1
BR6OX2
brassinosteroid-6-oxidase 2
arTal_v1_Chr5_+_904693_904693 0.33 AT5G03570.4
IREG2
iron regulated 2
arTal_v1_Chr3_-_5148340_5148340 0.32 AT3G15300.1
AT3G15300
VQ motif-containing protein
arTal_v1_Chr2_+_12706627_12706627 0.32 AT2G29740.1
UGT71C2
UDP-glucosyl transferase 71C2
arTal_v1_Chr3_-_13530098_13530098 0.32 AT3G32980.1
AT3G32980
Peroxidase superfamily protein
arTal_v1_Chr1_+_12010879_12010879 0.32 AT1G33120.1
AT1G33120
Ribosomal protein L6 family
arTal_v1_Chr5_-_24381599_24381599 0.31 AT5G60670.1
AT5G60670
Ribosomal protein L11 family protein
arTal_v1_Chr2_+_7697311_7697311 0.31 AT2G17720.1
P4H5
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr5_+_6687030_6687030 0.31 AT5G19780.1
TUA5
tubulin alpha-5
arTal_v1_Chr5_-_7973995_7973995 0.31 AT5G23660.1
SWEET12
bidirectional sugar transporter SWEET12-like protein
arTal_v1_Chr3_+_415389_415389 0.31 AT3G02230.1
RGP1
reversibly glycosylated polypeptide 1
arTal_v1_Chr5_+_903756_903756 0.30 AT5G03570.2
IREG2
iron regulated 2
arTal_v1_Chr2_-_12277417_12277417 0.30 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr2_+_18132484_18132484 0.30 AT2G43760.3
AT2G43760.2
AT2G43760.1
AT2G43760
molybdopterin biosynthesis MoaE family protein
arTal_v1_Chr1_-_23610653_23610779 0.30 AT1G63670.5
AT1G63670.3
AT1G63670.2
TRM12
hypothetical protein (DUF3741)
arTal_v1_Chr4_+_17739514_17739514 0.30 AT4G37750.1
ANT
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_-_18676883_18676883 0.29 AT5G46050.2
PTR3
peptide transporter 3
arTal_v1_Chr3_-_7592373_7592373 0.29 AT3G21550.1
DMP2
transmembrane protein, putative (DUF679 domain membrane protein 2)
arTal_v1_Chr5_+_23701392_23701392 0.29 AT5G58660.1
AT5G58660.2
AT5G58660
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr5_+_20151163_20151163 0.29 AT5G49640.1
AT5G49640
hypothetical protein
arTal_v1_Chr4_-_12560944_12560974 0.29 AT4G24200.1
AT4G24200.2
AT4G24200
Transcription elongation factor (TFIIS) family protein
arTal_v1_Chr5_-_18899646_18899646 0.28 AT5G46580.1
AT5G46580
pentatricopeptide (PPR) repeat-containing protein
arTal_v1_Chr5_+_23337832_23337832 0.28 AT5G57625.1
AT5G57625
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
arTal_v1_Chr1_+_23337167_23337167 0.28 AT1G62990.1
KNAT7
homeobox knotted-like protein
arTal_v1_Chr1_-_28466971_28466971 0.28 AT1G75820.1
CLV1
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr4_+_10949573_10949573 0.28 AT4G20270.1
BAM3
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr1_-_22349297_22349317 0.27 AT1G60680.2
AT1G60680.1
AT1G60680
NAD(P)-linked oxidoreductase superfamily protein
arTal_v1_Chr2_-_12277245_12277245 0.27 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr5_-_15011257_15011257 0.27 AT5G37790.1
AT5G37790
Protein kinase superfamily protein
arTal_v1_Chr2_-_7153430_7153430 0.27 AT2G16500.1
ADC1
arginine decarboxylase 1
arTal_v1_Chr3_-_18817405_18817405 0.27 AT3G50660.1
AT3G50660.2
DWF4
Cytochrome P450 superfamily protein
arTal_v1_Chr3_+_251868_251868 0.27 AT3G01680.1
SEOR1
sieve element occlusion amino-terminus protein
arTal_v1_Chr2_+_13328862_13328862 0.27 AT2G31270.1
CDT1A
CDT1-like protein A
arTal_v1_Chr4_+_1249971_1249971 0.26 AT4G02800.1
AT4G02800
GRIP/coiled-coil protein
arTal_v1_Chr1_-_23610327_23610327 0.26 AT1G63670.4
AT1G63670.1
TRM12
hypothetical protein (DUF3741)
arTal_v1_Chr5_+_25016860_25016860 0.26 AT5G62280.1
AT5G62280
DUF1442 family protein (DUF1442)
arTal_v1_Chr2_+_11650358_11650359 0.26 AT2G27230.1
AT2G27230.2
LHW
transcription factor-like protein
arTal_v1_Chr3_+_14320943_14320952 0.26 AT3G42170.1
AT3G42170.2
DAYSLEEPER
BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER
arTal_v1_Chr1_+_5124670_5124670 0.26 AT1G14860.1
NUDT18
nudix hydrolase homolog 18
arTal_v1_Chr5_+_18444607_18444607 0.26 AT5G45510.2
AT5G45510.1
AT5G45510
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr5_+_8863224_8863224 0.26 AT5G25460.1
DGR2
transmembrane protein, putative (Protein of unknown function, DUF642)
arTal_v1_Chr4_+_1032350_1032350 0.26 AT4G02330.1
ATPMEPCRB
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr1_-_20105948_20106077 0.26 AT1G53850.2
AT1G53850.1
PAE1
20S proteasome alpha subunit E1
arTal_v1_Chr1_+_6886669_6886669 0.26 AT1G19850.1
MP
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
arTal_v1_Chr5_+_463073_463073 0.26 AT5G02260.1
EXPA9
expansin A9
arTal_v1_Chr3_-_19063538_19063538 0.25 AT3G51350.1
AT3G51350
Eukaryotic aspartyl protease family protein
arTal_v1_Chr1_+_6886867_6886867 0.25 AT1G19850.2
MP
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
arTal_v1_Chr5_+_2046785_2046785 0.25 AT5G06660.1
AT5G06660
transmembrane/coiled-coil protein (Protein of unknown function DUF106, transmembrane)
arTal_v1_Chr1_-_23892193_23892193 0.25 AT1G64380.1
AT1G64380
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr3_-_10011712_10011807 0.25 AT3G27150.2
AT3G27150.1
AT3G27150
Galactose oxidase/kelch repeat superfamily protein
arTal_v1_Chr3_+_4303822_4303825 0.25 AT3G13300.3
AT3G13300.1
AT3G13300.2
VCS
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_+_17940050_17940088 0.25 AT1G48520.2
AT1G48520.1
AT1G48520.3
GATB
GLU-ADT subunit B
arTal_v1_Chr5_-_6684744_6684744 0.25 AT5G19770.1
TUA3
tubulin alpha-3
arTal_v1_Chr2_+_12805667_12805714 0.25 AT2G30010.2
AT2G30010.1
TBL45
TRICHOME BIREFRINGENCE-LIKE 45
arTal_v1_Chr3_-_723784_723784 0.25 AT3G03130.1
AT3G03130
lisH domain-like protein
arTal_v1_Chr3_-_14879792_14879792 0.25 AT3G42790.1
AL3
alfin-like 3
arTal_v1_Chr3_+_20679664_20679664 0.24 AT3G55720.1
AT3G55720
replication factor C subunit, putative (DUF620)
arTal_v1_Chr4_-_5325363_5325374 0.24 AT4G08400.3
AT4G08400.1
AT4G08400.2
AT4G08400
Proline-rich extensin-like family protein
arTal_v1_Chr2_-_10017373_10017373 0.24 AT2G23520.1
AT2G23520
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
arTal_v1_Chr1_-_8961183_8961183 0.24 AT1G25510.1
AT1G25510
Eukaryotic aspartyl protease family protein
arTal_v1_Chr2_+_18727504_18727504 0.24 AT2G45430.1
AHL22
AT-hook motif nuclear-localized protein 22
arTal_v1_Chr5_-_20406731_20406731 0.24 AT5G50150.1
AT5G50150
NEP-interacting protein, putative (DUF239)
arTal_v1_Chr4_-_18370698_18370698 0.24 AT4G39510.1
CYP96A12
cytochrome P450, family 96, subfamily A, polypeptide 12
arTal_v1_Chr5_-_22822904_22822904 0.24 AT5G56350.1
AT5G56350
Pyruvate kinase family protein
arTal_v1_Chr3_-_19459203_19459203 0.24 AT3G52490.1
AT3G52490
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr3_-_18492241_18492241 0.24 AT3G49860.1
ARLA1B
ADP-ribosylation factor-like A1B
arTal_v1_Chr3_-_20170320_20170320 0.24 AT3G54470.1
AT3G54470
uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS)
arTal_v1_Chr5_+_22261134_22261134 0.24 AT5G54800.1
GPT1
glucose 6-phosphate/phosphate translocator 1
arTal_v1_Chr3_+_1914506_1914506 0.24 AT3G06320.1
AT3G06320
Ribosomal protein L33 family protein
arTal_v1_Chr5_-_24083528_24083562 0.23 AT5G59780.2
AT5G59780.1
AT5G59780.3
MYB59
myb domain protein 59
arTal_v1_Chr5_+_19559201_19559243 0.23 AT5G48240.1
AT5G48240.2
AT5G48240.3
AT5G48240
Rrp15p protein
arTal_v1_Chr2_+_7190937_7190937 0.23 AT2G16586.1
AT2G16586
transmembrane protein
arTal_v1_Chr1_+_6728747_6728747 0.23 AT1G19440.1
KCS4
3-ketoacyl-CoA synthase 4
arTal_v1_Chr3_+_6323143_6323166 0.23 AT3G18410.1
AT3G18410.2
AT3G18410
NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 10-B-like protein (Complex I subunit NDUFS6)
arTal_v1_Chr1_+_19737405_19737405 0.23 AT1G52980.1
AtNug2
GTP-binding family protein
arTal_v1_Chr5_-_24528151_24528151 0.23 AT5G60950.1
COBL5
COBRA-like protein 5 precursor
arTal_v1_Chr4_+_11773221_11773221 0.23 AT4G22270.2
AT4G22270.1
MRB1
transmembrane protein, putative (DUF3537)
arTal_v1_Chr5_+_17977172_17977172 0.23 AT5G44578.2
AT5G44578.1
AT5G44578
transmembrane protein
arTal_v1_Chr1_-_9848015_9848015 0.23 AT1G28190.1
AT1G28190
hypothetical protein
arTal_v1_Chr1_-_22801416_22801416 0.23 AT1G61740.1
AT1G61740
Sulfite exporter TauE/SafE family protein
arTal_v1_Chr5_-_20164729_20164729 0.23 AT5G49660.1
XIP1
Leucine-rich repeat transmembrane protein kinase family protein
arTal_v1_Chr5_-_23117403_23117686 0.22 AT5G57110.3
AT5G57110.1
AT5G57110.2
ACA8
autoinhibited Ca2+ -ATPase, isoform 8
arTal_v1_Chr1_-_25895056_25895056 0.22 AT1G68880.1
bZIP
basic leucine-zipper 8
arTal_v1_Chr3_+_20028052_20028052 0.22 AT3G54090.1
FLN1
fructokinase-like 1
arTal_v1_Chr5_+_26012775_26012833 0.22 AT5G65120.1
AT5G65120.2
AT5G65120
DNA-directed RNA polymerase subunit beta
arTal_v1_Chr2_-_11214662_11214662 0.22 AT2G26330.1
ER
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr4_+_1151611_1151611 0.22 AT4G02630.1
AT4G02630
Protein kinase superfamily protein
arTal_v1_Chr5_+_23814763_23814763 0.22 AT5G58990.1
AT5G58990
28S ribosomal S34 protein
arTal_v1_Chr5_-_21439133_21439133 0.22 AT5G52882.1
AT5G52882
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr1_-_16798675_16798675 0.22 AT1G44170.3
ALDH3H1
aldehyde dehydrogenase 3H1
arTal_v1_Chr3_-_4748859_4748859 0.22 AT3G14260.1
AT3G14260
LURP-one-like protein (DUF567)
arTal_v1_Chr4_+_545796_545796 0.22 AT4G01320.3
AT4G01320.2
AT4G01320.1
ATSTE24
Peptidase family M48 family protein
arTal_v1_Chr1_-_6999523_6999523 0.22 AT1G20190.2
EXPA11
expansin 11
arTal_v1_Chr1_+_23789062_23789128 0.22 AT1G64090.2
AT1G64090.1
RTNLB3
Reticulan like protein B3
arTal_v1_Chr1_-_10122919_10122973 0.21 AT1G29020.1
AT1G29020.2
AT1G29020
Calcium-binding EF-hand family protein
arTal_v1_Chr5_-_7007502_7007502 0.21 AT5G20700.1
AT5G20700
senescence-associated family protein, putative (DUF581)
arTal_v1_Chr5_-_24984044_24984044 0.21 AT5G62190.1
PRH75
DEAD box RNA helicase (PRH75)
arTal_v1_Chr5_-_20870848_20870848 0.21 AT5G51350.1
MOL1
Leucine-rich repeat transmembrane protein kinase family protein
arTal_v1_Chr5_+_19263826_19263935 0.21 AT5G47490.2
AT5G47490.1
AT5G47490.3
AT5G47490
RGPR-like protein
arTal_v1_Chr1_+_1350080_1350080 0.21 AT1G04810.1
AT1G04810
26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
arTal_v1_Chr5_-_7820760_7820760 0.21 AT5G23220.1
NIC3
nicotinamidase 3
arTal_v1_Chr3_-_20629295_20629295 0.21 AT3G55610.1
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
arTal_v1_Chr1_+_23425352_23425352 0.21 AT1G63170.1
AT1G63170
Zinc finger, C3HC4 type (RING finger) family protein
arTal_v1_Chr2_+_487398_487398 0.21 AT2G02040.1
PTR2
peptide transporter 2
arTal_v1_Chr5_-_4307570_4307570 0.21 AT5G13430.1
AT5G13430
Ubiquinol-cytochrome C reductase iron-sulfur subunit
arTal_v1_Chr4_+_13370951_13370951 0.21 AT4G26470.3
AT4G26470.1
AT4G26470.2
AT4G26470
Calcium-binding EF-hand family protein
arTal_v1_Chr2_-_5936371_5936371 0.21 AT2G14100.1
CYP705A13
cytochrome P450, family 705, subfamily A, polypeptide 13
arTal_v1_Chr1_-_16800307_16800321 0.21 AT1G44170.2
AT1G44170.1
ALDH3H1
aldehyde dehydrogenase 3H1
arTal_v1_Chr3_-_20629093_20629093 0.21 AT3G55610.2
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
arTal_v1_Chr5_-_25355500_25355535 0.21 AT5G63220.2
AT5G63220.1
AT5G63220
golgi-to-ER traffic-like protein
arTal_v1_Chr2_-_14390317_14390339 0.21 AT2G34070.1
AT2G34070.2
TBL37
TRICHOME BIREFRINGENCE-LIKE 37
arTal_v1_Chr3_-_21499676_21499676 0.21 AT3G58060.2
AT3G58060
Cation efflux family protein
arTal_v1_Chr2_+_1993038_1993084 0.21 AT2G05440.2
AT2G05440.9
AT2G05440.5
AT2G05440.1
AT2G05440.6
AT2G05440.3
AT2G05440.4
AT2G05440.8
AT2G05440.7
GRP9
GLYCINE RICH PROTEIN 9
arTal_v1_Chr1_-_5016604_5016708 0.21 AT1G14620.2
AT1G14620.1
DECOY
decoy
arTal_v1_Chr5_-_18743077_18743077 0.21 AT5G46230.1
AT5G46230
hypothetical protein (Protein of unknown function, DUF538)
arTal_v1_Chr1_-_1373103_1373103 0.20 AT1G04860.1
UBP2
ubiquitin-specific protease 2
arTal_v1_Chr2_-_6880898_6880898 0.20 AT2G15790.1
SQN
peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase
arTal_v1_Chr2_+_7200807_7200807 0.20 AT2G16600.2
ROC3
rotamase CYP 3
arTal_v1_Chr1_+_2168561_2168561 0.20 AT1G07070.1
AT1G07070
Ribosomal protein L35Ae family protein
arTal_v1_Chr1_-_19256783_19256927 0.20 AT1G51850.1
AT1G51850.2
AT1G51850
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_+_22889073_22889083 0.20 AT5G56530.2
AT5G56530.1
AT5G56530
tRNA-splicing ligase (DUF239)
arTal_v1_Chr3_+_7541384_7541384 0.20 AT3G21420.1
LBO1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr3_+_3717894_3717894 0.20 AT3G11760.1
AT3G11760
structural maintenance of chromosomes flexible hinge domain protein
arTal_v1_Chr1_+_27054030_27054030 0.20 AT1G71880.1
SUC1
sucrose-proton symporter 1
arTal_v1_Chr2_+_7200423_7200423 0.20 AT2G16600.1
ROC3
rotamase CYP 3
arTal_v1_Chr3_+_3318975_3318975 0.20 AT3G10610.1
AT3G10610
Ribosomal S17 family protein
arTal_v1_Chr1_+_16970214_16970240 0.20 AT1G44900.2
AT1G44900.1
MCM2
minichromosome maintenance (MCM2/3/5) family protein
arTal_v1_Chr5_-_9000345_9000345 0.20 AT5G25820.1
AT5G25820
Exostosin family protein
arTal_v1_Chr3_-_2394550_2394694 0.20 AT3G07510.2
AT3G07510.3
AT3G07510.1
AT3G07510
maternal effect embryo arrest protein
arTal_v1_Chr4_+_626220_626220 0.20 AT4G01480.2
PPa5
pyrophosphorylase 5
arTal_v1_Chr1_+_524087_524087 0.20 AT1G02520.3
ABCB11
P-glycoprotein 11
arTal_v1_Chr5_-_25462458_25462568 0.20 AT5G63600.2
AT5G63600.1
FLS5
flavonol synthase 5
arTal_v1_Chr1_-_6999839_6999839 0.20 AT1G20190.1
EXPA11
expansin 11
arTal_v1_Chr4_+_15084098_15084098 0.20 AT4G30990.2
AT4G30990.1
AT4G30990.3
AT4G30990
ARM repeat superfamily protein
arTal_v1_Chr2_-_444324_444324 0.20 AT2G01950.1
BRL2
BRI1-like 2
arTal_v1_Chr1_+_3639835_3639835 0.20 AT1G10910.2
AT1G10910.1
EMB3103
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr4_+_626069_626069 0.20 AT4G01480.1
PPa5
pyrophosphorylase 5
arTal_v1_Chr1_-_7455009_7455009 0.20 AT1G21310.1
EXT3
extensin 3
arTal_v1_Chr1_+_7016599_7016599 0.20 AT1G20260.1
VAB3
ATPase, V1 complex, subunit B protein
arTal_v1_Chr2_+_937383_937383 0.20 AT2G03120.1
SPP
signal peptide peptidase
arTal_v1_Chr4_-_12270738_12270739 0.20 AT4G23510.2
AT4G23510.3
AT4G23510
Disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr3_-_532612_532612 0.20 AT3G02530.1
AT3G02530
TCP-1/cpn60 chaperonin family protein
arTal_v1_Chr3_+_4608076_4608076 0.19 AT3G13960.1
GRF5
growth-regulating factor 5
arTal_v1_Chr3_+_8603212_8603212 0.19 AT3G23820.1
GAE6
UDP-D-glucuronate 4-epimerase 6
arTal_v1_Chr1_+_3901950_3901950 0.19 AT1G11600.1
CYP77B1
cytochrome P450, family 77, subfamily B, polypeptide 1
arTal_v1_Chr5_-_768917_768917 0.19 AT5G03220.1
AT5G03220
Mediator complex, subunit Med7
arTal_v1_Chr2_-_15955752_15955752 0.19 AT2G38110.1
GPAT6
glycerol-3-phosphate acyltransferase 6
arTal_v1_Chr1_+_6002888_6002959 0.19 AT1G17470.1
AT1G17470.2
DRG1
developmentally regulated G-protein 1
arTal_v1_Chr5_+_3580396_3580396 0.19 AT5G11230.1
AT5G11230
Nucleotide-sugar transporter family protein
arTal_v1_Chr5_-_25168060_25168060 0.19 AT5G62680.1
GTR2
Major facilitator superfamily protein
arTal_v1_Chr1_+_523703_523703 0.19 AT1G02520.2
ABCB11
P-glycoprotein 11
arTal_v1_Chr5_+_533058_533058 0.19 AT5G02450.1
AT5G02450
Ribosomal protein L36e family protein
arTal_v1_Chr1_-_9304133_9304328 0.19 AT1G26850.3
AT1G26850.1
AT1G26850.2
AT1G26850
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_+_523536_523536 0.19 AT1G02520.1
ABCB11
P-glycoprotein 11
arTal_v1_Chr5_+_2317126_2317213 0.19 AT5G07340.1
AT5G07340.2
AT5G07340
Calreticulin family protein
arTal_v1_Chr5_+_3315401_3315529 0.19 AT5G10510.4
AT5G10510.5
AT5G10510.2
AT5G10510.3
AIL6
AINTEGUMENTA-like 6
arTal_v1_Chr3_-_21499943_21499943 0.19 AT3G58060.1
AT3G58060
Cation efflux family protein
arTal_v1_Chr1_-_25649254_25649254 0.19 AT1G68400.1
AT1G68400
leucine-rich repeat transmembrane protein kinase family protein
arTal_v1_Chr3_-_8902835_8902835 0.19 AT3G24480.1
AT3G24480
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_+_18400003_18400066 0.19 AT1G49720.1
AT1G49720.2
AT1G49720.3
ABF1
abscisic acid responsive element-binding factor 1
arTal_v1_Chr1_+_29391630_29391630 0.19 AT1G78110.1
AT1G78110
nucleolar GTP-binding protein
arTal_v1_Chr1_+_9259432_9259432 0.19 AT1G26770.1
EXPA10
expansin A10
arTal_v1_Chr3_-_3197457_3197457 0.18 AT3G10320.1
AT3G10320
Glycosyltransferase family 61 protein
arTal_v1_Chr5_+_18396254_18396254 0.18 AT5G45390.1
CLPP4
CLP protease P4
arTal_v1_Chr4_-_7998595_7998595 0.18 AT4G13780.1
AT4G13780
methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS
arTal_v1_Chr3_+_8837542_8837608 0.18 AT3G24350.1
AT3G24350.2
SYP32
syntaxin of plants 32
arTal_v1_Chr4_-_9199840_9199840 0.18 AT4G16250.1
PHYD
phytochrome D
arTal_v1_Chr5_+_21607410_21607410 0.18 AT5G53280.1
PDV1
plastid division1
arTal_v1_Chr1_-_6579314_6579314 0.18 AT1G19050.1
ARR7
response regulator 7
arTal_v1_Chr5_-_25866972_25867025 0.18 AT5G64700.2
AT5G64700.1
UMAMIT21
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr2_+_11545656_11545656 0.18 AT2G27050.1
EIL1
ETHYLENE-INSENSITIVE3-like 1
arTal_v1_Chr5_+_14897329_14897410 0.18 AT5G37510.1
AT5G37510.2
EMB1467
NADH-ubiquinone dehydrogenase
arTal_v1_Chr5_+_7758100_7758100 0.18 AT5G23110.1
AT5G23110
Zinc finger, C3HC4 type (RING finger) family protein
arTal_v1_Chr4_+_8618259_8618259 0.18 AT4G15093.1
LigB
catalytic LigB subunit of aromatic ring-opening dioxygenase family
arTal_v1_Chr3_-_6671638_6671638 0.18 AT3G19260.1
LOH2
LAG1 homologue 2
arTal_v1_Chr1_-_30280359_30280359 0.18 AT1G80530.1
AT1G80530
Major facilitator superfamily protein
arTal_v1_Chr3_-_16472409_16472409 0.18 AT3G45030.1
AT3G45030
Ribosomal protein S10p/S20e family protein
arTal_v1_Chr2_+_7666548_7666548 0.18 AT2G17630.1
AT2G17630
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
arTal_v1_Chr2_-_3527460_3527500 0.18 AT2G07690.2
AT2G07690.1
MCM5
Minichromosome maintenance (MCM2/3/5) family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G01940

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0035444 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
0.2 0.5 GO:0006659 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.1 0.4 GO:0035865 cellular response to potassium ion(GO:0035865)
0.1 0.3 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.1 0.3 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.1 0.2 GO:0071258 cellular response to gravity(GO:0071258)
0.1 0.2 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.1 0.4 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.1 0.3 GO:0006527 arginine catabolic process(GO:0006527)
0.1 0.3 GO:0010080 regulation of floral meristem growth(GO:0010080)
0.1 0.3 GO:0070863 regulation of protein exit from endoplasmic reticulum(GO:0070861) positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.1 0.2 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.1 0.5 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 0.2 GO:1901600 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.1 0.2 GO:1902292 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.1 0.2 GO:0000256 allantoin catabolic process(GO:0000256)
0.0 0.3 GO:0031116 positive regulation of microtubule polymerization or depolymerization(GO:0031112) positive regulation of microtubule polymerization(GO:0031116)
0.0 0.1 GO:0032196 transposition(GO:0032196)
0.0 0.2 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.0 0.2 GO:0009647 skotomorphogenesis(GO:0009647)
0.0 0.1 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.0 0.2 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.0 0.2 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.0 0.2 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.0 0.2 GO:0019388 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.0 0.2 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.0 0.1 GO:0015696 ammonium transport(GO:0015696)
0.0 0.2 GO:0010071 root meristem specification(GO:0010071)
0.0 0.4 GO:0010088 phloem development(GO:0010088)
0.0 0.2 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.0 0.2 GO:0006677 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.0 0.2 GO:0042256 mature ribosome assembly(GO:0042256)
0.0 0.2 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.0 0.1 GO:0090547 response to low humidity(GO:0090547)
0.0 0.1 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.0 0.2 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.0 0.2 GO:0060919 auxin influx(GO:0060919)
0.0 0.2 GO:0071586 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.0 0.2 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.0 0.3 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.0 0.1 GO:0051455 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.0 0.2 GO:0006517 protein deglycosylation(GO:0006517)
0.0 0.6 GO:0015770 sucrose transport(GO:0015770)
0.0 0.1 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.0 0.3 GO:0006821 chloride transport(GO:0006821)
0.0 0.2 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.0 0.1 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.0 0.1 GO:0018196 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.0 0.1 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) inositol phosphorylation(GO:0052746) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.0 0.5 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 0.3 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.0 0.1 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.0 0.1 GO:0070829 heterochromatin maintenance(GO:0070829)
0.0 0.1 GO:0045764 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.0 0.1 GO:0046203 spermidine catabolic process(GO:0046203)
0.0 0.4 GO:0051050 positive regulation of transport(GO:0051050)
0.0 0.1 GO:0000729 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.0 0.1 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.0 0.1 GO:0015692 lead ion transport(GO:0015692)
0.0 0.1 GO:0010271 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.0 0.1 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.0 0.1 GO:0051211 anisotropic cell growth(GO:0051211)
0.0 0.3 GO:0010358 leaf shaping(GO:0010358)
0.0 0.2 GO:0009584 detection of visible light(GO:0009584)
0.0 0.3 GO:0017157 regulation of exocytosis(GO:0017157)
0.0 0.2 GO:0051775 response to redox state(GO:0051775)
0.0 0.1 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.0 0.1 GO:0010254 nectary development(GO:0010254)
0.0 0.1 GO:0002188 translation reinitiation(GO:0002188)
0.0 0.2 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.0 1.0 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.2 GO:0051693 negative regulation of actin filament depolymerization(GO:0030835) actin filament capping(GO:0051693)
0.0 0.1 GO:0010338 leaf formation(GO:0010338)
0.0 0.1 GO:0044277 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.0 0.2 GO:0007105 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.0 0.4 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.1 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.0 0.1 GO:0051601 exocyst localization(GO:0051601)
0.0 0.2 GO:0080183 response to photooxidative stress(GO:0080183)
0.0 0.3 GO:0018126 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.1 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.0 0.2 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.1 GO:0048872 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.0 0.5 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.1 GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process(GO:0006207)
0.0 0.1 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.0 0.1 GO:0071217 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217)
0.0 0.3 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 0.1 GO:0006567 threonine catabolic process(GO:0006567)
0.0 0.2 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.0 0.1 GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000479)
0.0 0.1 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.0 0.3 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.0 0.1 GO:0035494 SNARE complex disassembly(GO:0035494)
0.0 0.1 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.0 0.0 GO:0009726 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.0 0.3 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.6 GO:0018208 protein peptidyl-prolyl isomerization(GO:0000413) peptidyl-proline modification(GO:0018208)
0.0 0.5 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.1 GO:1900908 regulation of ethylene biosynthetic process(GO:0010364) regulation of sulfur amino acid metabolic process(GO:0031335) regulation of olefin metabolic process(GO:1900908) regulation of olefin biosynthetic process(GO:1900911)
0.0 0.1 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.0 0.1 GO:0071108 protein K63-linked deubiquitination(GO:0070536) protein K48-linked deubiquitination(GO:0071108)
0.0 0.2 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.1 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.0 0.1 GO:1902751 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.0 0.3 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.0 0.0 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.0 0.1 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.0 0.1 GO:0048480 stigma development(GO:0048480)
0.0 0.1 GO:0042360 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.0 0.1 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.0 0.3 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.2 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.1 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.1 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.0 0.2 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.0 0.1 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.0 0.2 GO:0051555 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.0 0.0 GO:0051176 positive regulation of sulfur metabolic process(GO:0051176)
0.0 0.3 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.1 GO:0010165 female meiotic division(GO:0007143) response to X-ray(GO:0010165)
0.0 0.1 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.0 0.1 GO:2000580 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.0 0.2 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.1 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.6 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.3 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.0 0.1 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 0.3 GO:0032543 mitochondrial translation(GO:0032543)
0.0 0.1 GO:0045903 positive regulation of translational fidelity(GO:0045903)
0.0 0.1 GO:0010044 response to aluminum ion(GO:0010044)
0.0 0.1 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.0 0.1 GO:0006559 L-phenylalanine catabolic process(GO:0006559) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.0 0.1 GO:0016123 xanthophyll biosynthetic process(GO:0016123)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.1 0.4 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.1 0.6 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 0.2 GO:0035371 microtubule plus-end(GO:0035371)
0.0 0.6 GO:0045298 tubulin complex(GO:0045298)
0.0 0.2 GO:0034515 proteasome storage granule(GO:0034515)
0.0 0.4 GO:0042555 MCM complex(GO:0042555)
0.0 0.3 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 0.2 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 0.2 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 0.3 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 0.1 GO:0009501 amyloplast(GO:0009501)
0.0 0.2 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.2 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.0 0.5 GO:0009574 preprophase band(GO:0009574)
0.0 0.1 GO:0031298 replication fork protection complex(GO:0031298)
0.0 0.7 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.2 GO:0005688 U6 snRNP(GO:0005688)
0.0 0.2 GO:0098827 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.0 0.2 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.0 0.0 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.0 0.1 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.4 GO:0005881 cytoplasmic microtubule(GO:0005881)
0.0 0.3 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 2.5 GO:0000325 plant-type vacuole(GO:0000325)
0.0 0.3 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.2 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 0.0 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.0 0.1 GO:0055037 recycling endosome(GO:0055037)
0.0 0.1 GO:0008278 cohesin complex(GO:0008278)
0.0 0.1 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 0.1 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.1 GO:0030286 dynein complex(GO:0030286)
0.0 1.0 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.1 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.0 0.1 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0015099 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.1 0.4 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.1 0.5 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.1 0.4 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.1 0.4 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.1 0.3 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.1 0.4 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 0.4 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.2 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 0.2 GO:0015152 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.1 0.2 GO:0008936 nicotinamidase activity(GO:0008936)
0.1 0.3 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.2 GO:0019003 GDP binding(GO:0019003)
0.1 0.5 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.1 0.2 GO:0008517 folic acid transporter activity(GO:0008517)
0.1 0.2 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 0.5 GO:0001653 peptide receptor activity(GO:0001653)
0.1 0.2 GO:0004106 chorismate mutase activity(GO:0004106)
0.1 0.3 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.0 0.2 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.0 0.1 GO:0051010 microtubule plus-end binding(GO:0051010)
0.0 0.4 GO:0017116 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.1 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.0 0.2 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.7 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.3 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.0 0.2 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.0 0.3 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.2 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.0 0.1 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.0 0.1 GO:0043325 phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.0 0.1 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.0 0.1 GO:0030275 LRR domain binding(GO:0030275)
0.0 0.6 GO:0008144 drug binding(GO:0008144)
0.0 0.2 GO:0004348 glucosylceramidase activity(GO:0004348)
0.0 0.1 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 0.3 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.0 0.2 GO:0009883 red or far-red light photoreceptor activity(GO:0009883)
0.0 0.1 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.0 0.8 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.1 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.0 0.6 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.7 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.4 GO:0008199 ferric iron binding(GO:0008199)
0.0 0.2 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.2 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.1 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.0 0.1 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.1 GO:0051740 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 0.1 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.2 GO:0045431 flavonol synthase activity(GO:0045431)
0.0 0.1 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.0 0.1 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.1 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.1 GO:0016034 maleylacetoacetate isomerase activity(GO:0016034)
0.0 0.3 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 0.2 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.0 0.2 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 0.4 GO:0031418 L-ascorbic acid binding(GO:0031418)
0.0 0.2 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.0 0.1 GO:0047780 citrate dehydratase activity(GO:0047780)
0.0 0.1 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.0 0.2 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 0.1 GO:0009884 cytokinin receptor activity(GO:0009884)
0.0 0.3 GO:0004743 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.1 GO:0015105 arsenite transmembrane transporter activity(GO:0015105)
0.0 0.1 GO:0051765 inositol tetrakisphosphate kinase activity(GO:0051765)
0.0 0.2 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.1 GO:0015026 coreceptor activity(GO:0015026)
0.0 0.1 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 0.1 GO:0016841 ammonia-lyase activity(GO:0016841)
0.0 0.1 GO:0046030 inositol trisphosphate phosphatase activity(GO:0046030)
0.0 0.1 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.0 0.1 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.0 0.1 GO:0008481 sphinganine kinase activity(GO:0008481)
0.0 0.1 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.0 0.2 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 0.1 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.0 0.6 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.0 0.1 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.0 0.1 GO:0047443 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.0 0.1 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.0 0.2 GO:0035198 miRNA binding(GO:0035198)
0.0 0.2 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.0 0.1 GO:0033862 UMP kinase activity(GO:0033862)
0.0 0.1 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.0 0.1 GO:0001664 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.0 0.2 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.9 GO:0043621 protein self-association(GO:0043621)
0.0 0.1 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.0 0.1 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.0 0.1 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.2 GO:0008137 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.2 GO:0051117 ATPase binding(GO:0051117)
0.0 1.3 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.4 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.1 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.0 0.5 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.1 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 0.2 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.2 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 0.1 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.0 0.2 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.1 GO:0045505 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.0 0.0 GO:0005344 oxygen transporter activity(GO:0005344)
0.0 0.1 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.0 0.1 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 PID ATR PATHWAY ATR signaling pathway
0.0 0.1 PID IL12 2PATHWAY IL12-mediated signaling events
0.0 0.1 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.6 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 7ALPHA HYDROXYCHOLESTEROL Genes involved in Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
0.1 0.3 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.1 0.3 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.1 0.2 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.1 0.4 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.1 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.0 0.1 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.0 0.1 REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT Genes involved in SLC-mediated transmembrane transport
0.0 0.2 REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION Genes involved in Platelet activation, signaling and aggregation
0.0 0.2 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
0.0 0.1 REACTOME SPHINGOLIPID METABOLISM Genes involved in Sphingolipid metabolism