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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G18160

Z-value: 1.27

Transcription factors associated with AT2G18160

Gene Symbol Gene ID Gene Info
AT2G18160
AT2G18160 basic leucine-zipper 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
bZIP2arTal_v1_Chr2_-_7899242_78992420.431.3e-01Click!

Activity profile of AT2G18160 motif

Sorted Z-values of AT2G18160 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_+_9829261_9829261 3.46 AT1G28135.1
AT1G28135
hypothetical protein
arTal_v1_Chr5_+_6833564_6833659 1.75 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
DIN10
Raffinose synthase family protein
arTal_v1_Chr5_+_19183523_19183571 1.49 AT5G47240.2
AT5G47240.1
NUDT8
nudix hydrolase homolog 8
arTal_v1_Chr3_-_3091766_3091766 1.40 AT3G10020.2
AT3G10020
plant/protein
arTal_v1_Chr1_+_30241452_30241452 1.36 AT1G80440.1
AT1G80440
Galactose oxidase/kelch repeat superfamily protein
arTal_v1_Chr3_-_3091922_3091922 1.25 AT3G10020.1
AT3G10020
plant/protein
arTal_v1_Chr3_+_22804998_22804998 1.19 AT3G61630.1
CRF6
cytokinin response factor 6
arTal_v1_Chr2_-_6493512_6493512 1.18 AT2G15020.1
AT2G15020
hypothetical protein
arTal_v1_Chr4_-_18581696_18581696 1.16 AT4G40090.1
AGP3
arabinogalactan protein 3
arTal_v1_Chr4_+_7304323_7304323 1.16 AT4G12290.2
AT4G12290
Copper amine oxidase family protein
arTal_v1_Chr5_+_26266180_26266266 1.14 AT5G65690.1
AT5G65690.2
AT5G65690.3
AT5G65690.4
PCK2
phosphoenolpyruvate carboxykinase 2
arTal_v1_Chr5_-_8181107_8181107 1.13 AT5G24155.2
AT5G24155.3
AT5G24155.1
AT5G24155
FAD/NAD(P)-binding oxidoreductase family protein
arTal_v1_Chr4_+_7303985_7303985 1.11 AT4G12290.1
AT4G12290
Copper amine oxidase family protein
arTal_v1_Chr3_+_17920795_17920795 1.10 AT3G48390.1
AT3G48390
MA3 domain-containing protein
arTal_v1_Chr5_+_7664871_7664871 1.08 AT5G22920.2
AT5G22920.1
AT5G22920
CHY-type/CTCHY-type/RING-type Zinc finger protein
arTal_v1_Chr3_+_5212984_5212984 1.08 AT3G15450.3
AT3G15450.1
AT3G15450.2
AT3G15450
aluminum induced protein with YGL and LRDR motifs
arTal_v1_Chr1_+_7612834_7612834 1.07 AT1G21680.1
AT1G21680
DPP6 N-terminal domain-like protein
arTal_v1_Chr2_+_7845923_7845999 1.02 AT2G18050.2
AT2G18050.1
HIS1-3
histone H1-3
arTal_v1_Chr3_-_21293158_21293171 1.00 AT3G57520.2
AT3G57520.3
AT3G57520.1
SIP2
seed imbibition 2
arTal_v1_Chr1_+_3832563_3832563 0.98 AT1G11380.1
AT1G11380
PLAC8 family protein
arTal_v1_Chr5_-_22115539_22115539 0.98 AT5G54470.1
BBX29
B-box type zinc finger family protein
arTal_v1_Chr5_-_10798235_10798305 0.98 AT5G28770.4
AT5G28770.1
AT5G28770.3
AT5G28770.2
BZO2H3
bZIP transcription factor family protein
arTal_v1_Chr5_-_7250770_7250770 0.97 AT5G21940.1
AT5G21940
hybrid signal transduction histidine kinase M-like protein
arTal_v1_Chr5_-_23768111_23768111 0.96 AT5G58860.1
CYP86A1
cytochrome P450, family 86, subfamily A, polypeptide 1
arTal_v1_Chr3_+_21982989_21982989 0.96 AT3G59480.1
AT3G59480
pfkB-like carbohydrate kinase family protein
arTal_v1_Chr5_-_26810116_26810116 0.95 AT5G67190.1
DEAR2
DREB and EAR motif protein 2
arTal_v1_Chr1_+_28174187_28174187 0.93 AT1G75030.1
TLP-3
thaumatin-like protein 3
arTal_v1_Chr2_-_10429487_10429487 0.93 AT2G24550.1
AT2G24550
major centromere autoantigen B-like protein
arTal_v1_Chr1_+_25657757_25657757 0.92 AT1G68440.1
AT1G68440
transmembrane protein
arTal_v1_Chr4_-_8974690_8974769 0.92 AT4G15760.2
AT4G15760.1
MO1
monooxygenase 1
arTal_v1_Chr2_-_761013_761064 0.90 AT2G02710.2
AT2G02710.3
AT2G02710.4
AT2G02710.1
PLPB
PAS/LOV protein B
arTal_v1_Chr3_-_19312281_19312281 0.90 AT3G52060.1
AT3G52060
core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
arTal_v1_Chr1_+_17847042_17847042 0.90 AT1G48300.1
DGAT3
diacylglycerol acyltransferase
arTal_v1_Chr1_+_28107822_28107873 0.89 AT1G74810.2
AT1G74810.5
AT1G74810.3
AT1G74810.4
AT1G74810.6
AT1G74810.7
AT1G74810.1
BOR5
HCO3- transporter family
arTal_v1_Chr3_+_22602816_22602910 0.88 AT3G61060.1
AT3G61060.2
PP2-A13
phloem protein 2-A13
arTal_v1_Chr5_-_3278461_3278461 0.87 AT5G10430.1
AGP4
arabinogalactan protein 4
arTal_v1_Chr2_+_12847518_12847518 0.86 AT2G30100.1
AT2G30100
pentatricopeptide (PPR) repeat-containing protein
arTal_v1_Chr5_-_5904380_5904380 0.85 AT5G17860.2
CAX7
calcium exchanger 7
arTal_v1_Chr5_-_23367063_23367063 0.85 AT5G57685.1
GDU3
glutamine dumper 3
arTal_v1_Chr1_-_1647147_1647147 0.85 AT1G05560.1
UGT75B1
UDP-glucosyltransferase 75B1
arTal_v1_Chr4_+_334573_334573 0.85 AT4G00780.1
AT4G00780
TRAF-like family protein
arTal_v1_Chr1_-_4066344_4066344 0.85 AT1G12030.1
AT1G12030
phosphoenolpyruvate carboxylase, putative (DUF506)
arTal_v1_Chr1_-_17285749_17285749 0.84 AT1G47128.1
RD21A
Granulin repeat cysteine protease family protein
arTal_v1_Chr4_+_9759203_9759203 0.83 AT4G17500.1
ERF-1
ethylene responsive element binding factor 1
arTal_v1_Chr5_-_5904532_5904532 0.82 AT5G17860.1
CAX7
calcium exchanger 7
arTal_v1_Chr5_+_16290386_16290386 0.82 AT5G40690.1
AT5G40690
histone-lysine N-methyltransferase trithorax-like protein
arTal_v1_Chr1_+_25508639_25508639 0.82 AT1G68050.1
FKF1
flavin-binding, kelch repeat, f box 1
arTal_v1_Chr2_+_11041331_11041331 0.81 AT2G25900.2
AT2G25900.1
ATCTH
Zinc finger C-x8-C-x5-C-x3-H type family protein
arTal_v1_Chr1_-_1647435_1647435 0.81 AT1G05560.2
UGT75B1
UDP-glucosyltransferase 75B1
arTal_v1_Chr2_-_8913747_8913747 0.80 AT2G20670.1
AT2G20670
sugar phosphate exchanger, putative (DUF506)
arTal_v1_Chr5_-_19172956_19172956 0.77 AT5G47220.1
ERF2
ethylene responsive element binding factor 2
arTal_v1_Chr5_+_26447642_26447648 0.77 AT5G66170.3
AT5G66170.2
AT5G66170.1
STR18
sulfurtransferase 18
arTal_v1_Chr1_+_10897925_10897925 0.77 AT1G30720.1
AT1G30720
FAD-binding Berberine family protein
arTal_v1_Chr3_-_1055196_1055196 0.77 AT3G04060.1
NAC046
NAC domain containing protein 46
arTal_v1_Chr3_-_3025945_3025945 0.76 AT3G09850.1
AT3G09850
D111/G-patch domain-containing protein
arTal_v1_Chr5_+_17324909_17324909 0.76 AT5G43150.1
AT5G43150
elongation factor
arTal_v1_Chr3_+_20736508_20736512 0.76 AT3G55880.1
AT3G55880.3
AT3G55880.2
AT3G55880.4
SUE4
Alpha/beta hydrolase related protein
arTal_v1_Chr1_-_4526204_4526204 0.76 AT1G13245.1
RTFL17
ROTUNDIFOLIA like 17
arTal_v1_Chr3_-_22907958_22907958 0.76 AT3G61880.1
AT3G61880.2
CYP78A9
cytochrome p450 78a9
arTal_v1_Chr1_-_8912642_8912642 0.76 AT1G25400.2
AT1G25400
transmembrane protein
arTal_v1_Chr1_-_8912822_8912822 0.76 AT1G25400.1
AT1G25400
transmembrane protein
arTal_v1_Chr1_+_4688018_4688018 0.75 AT1G13670.1
AT1G13670
hypothetical protein
arTal_v1_Chr3_-_4660945_4660945 0.75 AT3G14067.1
AT3G14067
Subtilase family protein
arTal_v1_Chr4_+_7866784_7866784 0.75 AT4G13530.2
AT4G13530
transmembrane protein
arTal_v1_Chr2_-_16690182_16690182 0.74 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
arTal_v1_Chr2_-_7765276_7765276 0.74 AT2G17870.1
CSP3
cold shock domain protein 3
arTal_v1_Chr2_-_10446434_10446434 0.74 AT2G24580.1
AT2G24580
FAD-dependent oxidoreductase family protein
arTal_v1_Chr3_+_5979814_5979834 0.74 AT3G17470.2
AT3G17470.3
AT3G17470.1
CRSH
Ca2+-activated RelA/spot-like protein
arTal_v1_Chr2_-_1140204_1140204 0.73 AT2G03730.1
AT2G03730.2
ACR5
ACT domain repeat 5
arTal_v1_Chr4_-_7686873_7687006 0.73 AT4G13250.2
AT4G13250.1
NYC1
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr3_-_17506124_17506124 0.73 AT3G47500.1
CDF3
cycling DOF factor 3
arTal_v1_Chr1_-_29715017_29715017 0.72 AT1G78990.1
AT1G78990
HXXXD-type acyl-transferase family protein
arTal_v1_Chr2_-_14146471_14146555 0.72 AT2G33380.2
AT2G33380.1
RD20
Caleosin-related family protein
arTal_v1_Chr5_-_17629363_17629363 0.72 AT5G43850.1
ARD4
RmlC-like cupins superfamily protein
arTal_v1_Chr3_-_18946621_18946621 0.72 AT3G51000.1
AT3G51000
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_+_22951323_22951323 0.72 AT3G61970.1
NGA2
AP2/B3-like transcriptional factor family protein
arTal_v1_Chr1_-_12003005_12003005 0.71 AT1G33102.1
AT1G33102
hypothetical protein
arTal_v1_Chr5_-_8358546_8358546 0.71 AT5G24470.1
PRR5
two-component response regulator-like protein
arTal_v1_Chr1_-_1962965_1962965 0.71 AT1G06430.2
AT1G06430.3
FTSH8
FTSH protease 8
arTal_v1_Chr3_-_18469962_18469962 0.70 AT3G49790.1
AT3G49790
Carbohydrate-binding protein
arTal_v1_Chr4_+_5238773_5238917 0.69 AT4G08290.1
AT4G08290.2
UMAMIT20
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr2_-_9037782_9037782 0.69 AT2G21060.1
GRP2B
glycine-rich protein 2B
arTal_v1_Chr1_-_1963189_1963189 0.68 AT1G06430.1
FTSH8
FTSH protease 8
arTal_v1_Chr4_+_7866328_7866328 0.68 AT4G13530.1
AT4G13530
transmembrane protein
arTal_v1_Chr1_-_4358894_4358894 0.68 AT1G12780.1
UGE1
UDP-D-glucose/UDP-D-galactose 4-epimerase 1
arTal_v1_Chr5_-_14920025_14920025 0.68 AT5G37550.1
AT5G37550
hypothetical protein
arTal_v1_Chr1_+_6945695_6945695 0.68 AT1G20030.1
AT1G20030
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr1_+_4084162_4084162 0.67 AT1G12080.1
AT1G12080.2
AT1G12080
Vacuolar calcium-binding protein-like protein
arTal_v1_Chr2_-_14541617_14541617 0.67 AT2G34500.1
CYP710A1
cytochrome P450, family 710, subfamily A, polypeptide 1
arTal_v1_Chr5_-_17831336_17831336 0.67 AT5G44260.1
AT5G44260
Zinc finger C-x8-C-x5-C-x3-H type family protein
arTal_v1_Chr2_+_8108898_8108898 0.67 AT2G18700.1
TPS11
trehalose phosphatase/synthase 11
arTal_v1_Chr1_+_4542168_4542168 0.66 AT1G13260.1
RAV1
related to ABI3/VP1 1
arTal_v1_Chr3_-_19453212_19453212 0.65 AT3G52480.1
AT3G52480
transmembrane protein
arTal_v1_Chr3_-_20086967_20086967 0.65 AT3G54260.1
TBL36
TRICHOME BIREFRINGENCE-LIKE 36
arTal_v1_Chr5_+_17526660_17526729 0.65 AT5G43630.2
AT5G43630.1
AT5G43630.3
AT5G43630.4
TZP
zinc knuckle (CCHC-type) family protein
arTal_v1_Chr1_-_11561899_11561920 0.65 AT1G32130.1
AT1G32130.2
IWS1
Transcription elongation factor (TFIIS) family protein
arTal_v1_Chr2_+_19446730_19446730 0.65 AT2G47400.1
CP12-1
CP12 domain-containing protein 1
arTal_v1_Chr5_-_19629167_19629167 0.65 AT5G48430.1
AT5G48430
Eukaryotic aspartyl protease family protein
arTal_v1_Chr1_+_6945425_6945425 0.64 AT1G20030.2
AT1G20030
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr1_-_26721563_26721563 0.64 AT1G70870.1
AT1G70870
Polyketide cyclase/dehydrase and lipid transport superfamily protein
arTal_v1_Chr5_-_5358789_5358789 0.64 AT5G16370.1
AAE5
acyl activating enzyme 5
arTal_v1_Chr2_+_17909007_17909007 0.64 AT2G43060.1
IBH1
ILI1 binding bHLH 1
arTal_v1_Chr4_+_15676240_15676240 0.64 AT4G32480.1
AT4G32480
sugar phosphate exchanger, putative (DUF506)
arTal_v1_Chr5_+_16441808_16441808 0.63 AT5G41080.2
GDPD2
PLC-like phosphodiesterases superfamily protein
arTal_v1_Chr4_-_17875201_17875268 0.63 AT4G38060.1
AT4G38060.3
AT4G38060.4
AT4G38060
hypothetical protein
arTal_v1_Chr5_-_573634_573634 0.62 AT5G02550.1
AT5G02550
hypothetical protein
arTal_v1_Chr5_-_25410669_25410725 0.62 AT5G63450.1
AT5G63450.2
CYP94B1
cytochrome P450, family 94, subfamily B, polypeptide 1
arTal_v1_Chr4_+_13675537_13675537 0.62 AT4G27310.1
BBX28
B-box type zinc finger family protein
arTal_v1_Chr1_-_977761_977911 0.62 AT1G03850.1
AT1G03850.2
AT1G03850.3
GRXS13
Glutaredoxin family protein
arTal_v1_Chr5_-_25920254_25920254 0.62 AT5G64840.1
ABCF5
general control non-repressible 5
arTal_v1_Chr5_-_4430901_4430901 0.61 AT5G13730.1
SIG4
sigma factor 4
arTal_v1_Chr4_-_16703486_16703504 0.61 AT4G35090.3
AT4G35090.1
CAT2
catalase 2
arTal_v1_Chr1_+_5290582_5290582 0.61 AT1G15380.1
GLYI4
Lactoylglutathione lyase / glyoxalase I family protein
arTal_v1_Chr3_-_6632164_6632164 0.61 AT3G19170.1
PREP1
presequence protease 1
arTal_v1_Chr3_-_6631968_6631968 0.61 AT3G19170.2
PREP1
presequence protease 1
arTal_v1_Chr4_-_16703286_16703286 0.61 AT4G35090.2
CAT2
catalase 2
arTal_v1_Chr1_-_10949482_10949482 0.61 AT1G30820.1
AT1G30820
CTP synthase family protein
arTal_v1_Chr1_+_5290747_5290747 0.60 AT1G15380.2
GLYI4
Lactoylglutathione lyase / glyoxalase I family protein
arTal_v1_Chr5_-_3971452_3971452 0.60 AT5G12270.1
AT5G12270
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr1_+_23128651_23128651 0.60 AT1G62480.1
AT1G62480
Vacuolar calcium-binding protein-like protein
arTal_v1_Chr2_+_16083645_16083691 0.60 AT2G38400.1
AT2G38400.2
AGT3
alanine:glyoxylate aminotransferase 3
arTal_v1_Chr5_-_18597823_18597907 0.60 AT5G45840.1
AT5G45840.2
AT5G45840
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr4_-_17874803_17874803 0.60 AT4G38060.2
AT4G38060
hypothetical protein
arTal_v1_Chr1_-_28284036_28284168 0.60 AT1G75380.3
AT1G75380.1
AT1G75380.2
AT1G75380.4
BBD1
bifunctional nuclease in basal defense response 1
arTal_v1_Chr2_+_18624264_18624354 0.59 AT2G45170.1
AT2G45170.2
ATG8E
AUTOPHAGY 8E
arTal_v1_Chr3_-_6172005_6172005 0.59 AT3G18035.1
AT3G18035.2
HON4
winged-helix DNA-binding transcription factor family protein
arTal_v1_Chr5_+_16441655_16441655 0.59 AT5G41080.1
GDPD2
PLC-like phosphodiesterases superfamily protein
arTal_v1_Chr2_+_14097369_14097369 0.59 AT2G33250.1
AT2G33250
transmembrane protein
arTal_v1_Chr4_-_18217616_18217616 0.58 AT4G39090.1
RD19
Papain family cysteine protease
arTal_v1_Chr4_-_17674589_17674589 0.58 AT4G37620.1
AT4G37620

arTal_v1_Chr4_+_17925180_17925180 0.58 AT4G38220.2
AT4G38220.1
AQI
Peptidase M20/M25/M40 family protein
arTal_v1_Chr2_-_16432751_16432751 0.58 AT2G39350.1
ABCG1
ABC-2 type transporter family protein
arTal_v1_Chr1_-_25895056_25895056 0.57 AT1G68880.1
bZIP
basic leucine-zipper 8
arTal_v1_Chr2_-_16850487_16850494 0.57 AT2G40340.3
AT2G40340.1
AT2G40340.2
AT2G40340.5
AT2G40340.6
AT2G40340.4
DREB2C
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_+_23346876_23346876 0.56 AT5G57655.1
AT5G57655
xylose isomerase family protein
arTal_v1_Chr4_+_18406627_18406714 0.56 AT4G39660.1
AT4G39660.2
AGT2
alanine:glyoxylate aminotransferase 2
arTal_v1_Chr3_-_17910736_17910738 0.56 AT3G48360.3
AT3G48360.1
AT3G48360.2
BT2
BTB and TAZ domain protein 2
arTal_v1_Chr5_+_23346675_23346675 0.56 AT5G57655.2
AT5G57655
xylose isomerase family protein
arTal_v1_Chr1_+_17686990_17686990 0.56 AT1G47970.1
AT1G47970
nucleolin
arTal_v1_Chr1_+_10974383_10974445 0.56 AT1G30840.1
AT1G30840.2
PUP4
purine permease 4
arTal_v1_Chr2_-_15294857_15294857 0.56 AT2G36450.1
HRD
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_+_564018_564018 0.56 AT1G02640.1
BXL2
beta-xylosidase 2
arTal_v1_Chr1_+_10892445_10892445 0.54 AT1G30700.1
AT1G30700
FAD-binding Berberine family protein
arTal_v1_Chr4_+_6905848_6905848 0.54 AT4G11360.1
RHA1B
RING-H2 finger A1B
arTal_v1_Chr5_+_16285711_16285711 0.54 AT5G40670.1
AT5G40670
PQ-loop repeat family protein / transmembrane family protein
arTal_v1_Chr1_-_2195996_2195996 0.54 AT1G07150.1
MAPKKK13
mitogen-activated protein kinase kinase kinase 13
arTal_v1_Chr1_+_739544_739678 0.54 AT1G03090.2
AT1G03090.1
MCCA
methylcrotonyl-CoA carboxylase alpha chain
arTal_v1_Chr2_+_17044932_17044932 0.54 AT2G40840.1
DPE2
disproportionating enzyme 2
arTal_v1_Chr2_+_15257418_15257418 0.54 AT2G36380.1
ABCG34
pleiotropic drug resistance 6
arTal_v1_Chr4_+_17346805_17346805 0.54 AT4G36820.1
AT4G36820
calcium uniporter (DUF607)
arTal_v1_Chr5_-_2995675_2995784 0.54 AT5G09660.5
AT5G09660.4
AT5G09660.1
PMDH2
peroxisomal NAD-malate dehydrogenase 2
arTal_v1_Chr1_-_10942292_10942292 0.53 AT1G30810.2
AT1G30810.3
JMJ18
Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
arTal_v1_Chr5_-_2995307_2995307 0.53 AT5G09660.2
PMDH2
peroxisomal NAD-malate dehydrogenase 2
arTal_v1_Chr5_+_26710302_26710302 0.53 AT5G66880.1
SNRK2.3
sucrose nonfermenting 1(SNF1)-related protein kinase 2.3
arTal_v1_Chr4_-_810574_810611 0.53 AT4G01870.1
AT4G01870.2
AT4G01870
tolB protein-like protein
arTal_v1_Chr5_-_2995512_2995512 0.53 AT5G09660.3
PMDH2
peroxisomal NAD-malate dehydrogenase 2
arTal_v1_Chr1_-_26293173_26293173 0.53 AT1G69830.1
AMY3
alpha-amylase-like 3
arTal_v1_Chr5_-_3100291_3100291 0.53 AT5G09930.1
ABCF2
ABC transporter family protein
arTal_v1_Chr3_-_5992078_5992078 0.53 AT3G17510.2
CIPK1
CBL-interacting protein kinase 1
arTal_v1_Chr1_+_26122080_26122080 0.52 AT1G69490.1
NAP
NAC-like, activated by AP3/PI
arTal_v1_Chr3_+_8743113_8743113 0.52 AT3G24190.1
AT3G24190
Protein kinase superfamily protein
arTal_v1_Chr1_-_4228471_4228471 0.52 AT1G12420.2
ACR8
ACT domain repeat 8
arTal_v1_Chr3_+_3442237_3442237 0.52 AT3G10985.1
SAG20
senescence associated gene 20
arTal_v1_Chr5_-_24903131_24903131 0.51 AT5G61990.1
AT5G61990
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr5_-_24201364_24201415 0.51 AT5G60100.7
AT5G60100.2
AT5G60100.6
AT5G60100.1
AT5G60100.4
AT5G60100.5
AT5G60100.3
PRR3
pseudo-response regulator 3
arTal_v1_Chr4_-_10236041_10236057 0.51 AT4G18580.2
AT4G18580.1
AT4G18580
hypothetical protein
arTal_v1_Chr5_-_7377667_7377776 0.51 AT5G22290.2
AT5G22290.1
NAC089
NAC domain containing protein 89
arTal_v1_Chr1_-_6308243_6308243 0.51 AT1G18330.1
EPR1
Homeodomain-like superfamily protein
arTal_v1_Chr1_+_8709941_8709941 0.51 AT1G24580.1
AT1G24580
RING/U-box superfamily protein
arTal_v1_Chr5_+_24046512_24046512 0.51 AT5G59680.1
AT5G59680
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr1_-_6308010_6308010 0.51 AT1G18330.2
EPR1
Homeodomain-like superfamily protein
arTal_v1_Chr3_-_6555040_6555147 0.51 AT3G19000.2
AT3G19000.1
AT3G19000
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr3_-_5993001_5993001 0.51 AT3G17510.1
CIPK1
CBL-interacting protein kinase 1
arTal_v1_Chr1_+_1279351_1279351 0.51 AT1G04610.1
YUC3
YUCCA 3
arTal_v1_Chr5_+_26710469_26710469 0.51 AT5G66880.2
SNRK2.3
sucrose nonfermenting 1(SNF1)-related protein kinase 2.3
arTal_v1_Chr4_-_8794433_8794442 0.50 AT4G15390.1
AT4G15390.2
AT4G15390
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_-_4933620_4933620 0.50 AT5G15190.2
AT5G15190.1
AT5G15190
hypothetical protein
arTal_v1_Chr1_+_5124670_5124670 0.50 AT1G14860.1
NUDT18
nudix hydrolase homolog 18
arTal_v1_Chr3_-_2160646_2160669 0.50 AT3G06850.1
AT3G06850.2
BCE2
2-oxoacid dehydrogenases acyltransferase family protein
arTal_v1_Chr3_-_8718211_8718211 0.50 AT3G24140.1
AT3G24140.2
FMA
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr5_-_8186100_8186100 0.50 AT5G24160.3
SQE6
squalene monooxygenase 6
arTal_v1_Chr1_-_2013459_2013545 0.50 AT1G06570.1
AT1G06570.2
PDS1
4-hydroxyphenylpyruvate dioxygenase
arTal_v1_Chr2_-_8533779_8533779 0.50 AT2G19800.1
MIOX2
myo-inositol oxygenase 2
arTal_v1_Chr3_-_17306633_17306633 0.50 AT3G46970.1
PHS2
alpha-glucan phosphorylase 2
arTal_v1_Chr2_+_18894030_18894065 0.49 AT2G45910.2
AT2G45910.1
AT2G45910
U-box domain-containing protein kinase family protein
arTal_v1_Chr5_+_84474_84474 0.49 AT5G01210.1
AT5G01210
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_+_21910471_21910471 0.49 AT5G53970.1
TAT7
Tyrosine transaminase family protein
arTal_v1_Chr1_+_21043348_21043348 0.48 AT1G56220.2
AT1G56220.1
AT1G56220
Dormancy/auxin associated family protein
arTal_v1_Chr1_-_2195798_2195798 0.48 AT1G07150.2
MAPKKK13
mitogen-activated protein kinase kinase kinase 13
arTal_v1_Chr3_-_20272504_20272504 0.48 AT3G54760.2
AT3G54760.1
AT3G54760
dentin sialophosphoprotein-like protein
arTal_v1_Chr1_+_20210772_20210772 0.48 AT1G54130.1
RSH3
RELA/SPOT homolog 3
arTal_v1_Chr5_-_5033540_5033540 0.48 AT5G15500.2
AT5G15500.1
AT5G15500
Ankyrin repeat family protein
arTal_v1_Chr1_-_4229211_4229211 0.47 AT1G12420.1
ACR8
ACT domain repeat 8
arTal_v1_Chr1_+_28746833_28746833 0.47 AT1G76600.1
AT1G76600
poly polymerase
arTal_v1_Chr3_-_20178982_20179070 0.47 AT3G54500.1
AT3G54500.4
AT3G54500.3
AT3G54500.8
AT3G54500.2
AT3G54500.5
AT3G54500.7
AT3G54500.6
AT3G54500
agglutinin-like protein
arTal_v1_Chr4_+_17659382_17659382 0.47 AT4G37580.2
HLS1
Acyl-CoA N-acyltransferases (NAT) superfamily protein
arTal_v1_Chr1_-_7940805_7940805 0.47 AT1G22490.1
AT1G22490
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr1_+_21042951_21042977 0.47 AT1G56220.4
AT1G56220.5
AT1G56220.3
AT1G56220
Dormancy/auxin associated family protein
arTal_v1_Chr5_-_7735566_7735566 0.46 AT5G23050.1
AT5G23050.2
AAE17
acyl-activating enzyme 17
arTal_v1_Chr4_+_14566183_14566265 0.46 AT4G29740.3
AT4G29740.2
AT4G29740.1
CKX4
cytokinin oxidase 4

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G18160

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.7 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.4 1.6 GO:0080093 regulation of photorespiration(GO:0080093)
0.3 2.7 GO:0009061 anaerobic respiration(GO:0009061)
0.3 1.0 GO:0033530 raffinose metabolic process(GO:0033530)
0.3 0.9 GO:0010198 synergid death(GO:0010198)
0.3 0.8 GO:0010266 response to vitamin B1(GO:0010266)
0.3 2.3 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.2 0.7 GO:1904580 regulation of intracellular mRNA localization(GO:1904580)
0.2 1.7 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.2 0.7 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.2 0.6 GO:0080153 regulation of photosynthesis, dark reaction(GO:0010110) cellular response to anoxia(GO:0071454) regulation of reductive pentose-phosphate cycle(GO:0080152) negative regulation of reductive pentose-phosphate cycle(GO:0080153)
0.2 1.7 GO:0016584 nucleosome positioning(GO:0016584) negative regulation of chromatin silencing(GO:0031936)
0.2 1.2 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.2 0.6 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.2 0.8 GO:0006741 NADP biosynthetic process(GO:0006741)
0.2 0.6 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.2 0.9 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.2 0.5 GO:0010377 guard cell fate commitment(GO:0010377) response to low humidity(GO:0090547)
0.2 0.8 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.2 0.6 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.2 0.6 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.2 0.8 GO:1901404 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.1 2.0 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.1 0.8 GO:0043617 cellular response to sucrose starvation(GO:0043617)
0.1 0.5 GO:0000023 maltose metabolic process(GO:0000023)
0.1 0.4 GO:0051639 actin filament network formation(GO:0051639)
0.1 0.6 GO:0019323 pentose catabolic process(GO:0019323)
0.1 0.9 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.1 0.7 GO:0010731 protein glutathionylation(GO:0010731)
0.1 0.7 GO:0071267 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.1 0.4 GO:1902586 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.1 0.4 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.1 0.3 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 0.9 GO:0006570 tyrosine metabolic process(GO:0006570)
0.1 0.3 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.1 0.5 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
0.1 0.6 GO:0051176 positive regulation of sulfur metabolic process(GO:0051176)
0.1 0.3 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.1 0.3 GO:0010343 singlet oxygen-mediated programmed cell death(GO:0010343)
0.1 0.3 GO:0016540 protein autoprocessing(GO:0016540)
0.1 0.5 GO:0019310 inositol catabolic process(GO:0019310)
0.1 0.5 GO:0005980 glycogen catabolic process(GO:0005980)
0.1 0.5 GO:0060151 peroxisome localization(GO:0060151)
0.1 1.6 GO:0009649 entrainment of circadian clock(GO:0009649)
0.1 0.5 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.1 0.3 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.1 0.4 GO:0050792 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903) regulation of viral process(GO:0050792)
0.1 0.3 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.1 0.5 GO:0051098 regulation of binding(GO:0051098)
0.1 0.7 GO:0060969 negative regulation of gene silencing(GO:0060969)
0.1 0.4 GO:1902767 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.1 0.8 GO:1902222 L-phenylalanine catabolic process(GO:0006559) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.1 1.4 GO:0005983 starch catabolic process(GO:0005983)
0.1 0.6 GO:0042182 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.1 0.5 GO:0072337 modified amino acid transport(GO:0072337)
0.1 0.5 GO:0006552 leucine catabolic process(GO:0006552)
0.1 0.3 GO:0010042 response to manganese ion(GO:0010042)
0.1 0.5 GO:0043409 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
0.1 0.2 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.1 0.4 GO:0010226 response to lithium ion(GO:0010226)
0.1 0.6 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.2 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.1 0.3 GO:0030322 stabilization of membrane potential(GO:0030322)
0.1 0.6 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 0.4 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 0.2 GO:0006883 cellular sodium ion homeostasis(GO:0006883) chloride ion homeostasis(GO:0055064)
0.1 0.4 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.1 0.2 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.1 0.2 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.1 0.8 GO:0048317 seed morphogenesis(GO:0048317)
0.1 0.3 GO:0042550 photosystem I stabilization(GO:0042550)
0.1 0.7 GO:0045227 UDP-L-arabinose biosynthetic process(GO:0033358) extracellular polysaccharide biosynthetic process(GO:0045226) capsule polysaccharide biosynthetic process(GO:0045227) capsule organization(GO:0045230) extracellular polysaccharide metabolic process(GO:0046379)
0.1 0.4 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.1 0.8 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.1 0.4 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.1 0.3 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.7 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.1 0.1 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.1 1.2 GO:0046219 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.0 0.3 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.0 2.0 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.3 GO:0044211 CTP salvage(GO:0044211)
0.0 0.2 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.0 0.7 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 0.3 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.0 0.1 GO:1900033 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.0 0.5 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.0 0.8 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.4 GO:0052317 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.0 0.3 GO:0009972 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.0 1.2 GO:2000031 regulation of salicylic acid mediated signaling pathway(GO:2000031)
0.0 1.2 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.4 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.0 0.2 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.0 0.5 GO:0070828 heterochromatin organization(GO:0070828)
0.0 0.4 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 0.3 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.9 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.7 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.0 0.0 GO:0071732 cellular response to nitric oxide(GO:0071732)
0.0 0.3 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.0 0.2 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.0 0.4 GO:0006308 DNA catabolic process(GO:0006308)
0.0 0.3 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.0 1.7 GO:0016485 protein processing(GO:0016485)
0.0 1.6 GO:0048510 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.2 GO:0000719 photoreactive repair(GO:0000719)
0.0 0.2 GO:2000037 regulation of stomatal complex patterning(GO:2000037)
0.0 0.1 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.0 0.3 GO:0050879 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.0 0.8 GO:0006995 cellular response to nitrogen starvation(GO:0006995)
0.0 0.8 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.0 1.0 GO:0006094 gluconeogenesis(GO:0006094)
0.0 0.1 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.0 0.1 GO:0008608 attachment of spindle microtubules to kinetochore(GO:0008608)
0.0 0.1 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.0 0.1 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.0 0.2 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.0 2.2 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.7 GO:0046653 tetrahydrofolate metabolic process(GO:0046653)
0.0 0.2 GO:0051693 negative regulation of actin filament depolymerization(GO:0030835) actin filament capping(GO:0051693)
0.0 0.2 GO:0009268 response to pH(GO:0009268)
0.0 0.7 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 0.1 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.0 0.1 GO:0048255 mRNA stabilization(GO:0048255)
0.0 0.6 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.1 GO:0010028 xanthophyll cycle(GO:0010028)
0.0 1.9 GO:0009624 response to nematode(GO:0009624)
0.0 0.8 GO:0031056 regulation of histone modification(GO:0031056)
0.0 0.1 GO:0048533 sporocyte differentiation(GO:0048533)
0.0 0.2 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.0 0.2 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 2.1 GO:0009640 photomorphogenesis(GO:0009640)
0.0 0.1 GO:0048446 petal morphogenesis(GO:0048446)
0.0 0.1 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.0 0.3 GO:0080113 regulation of seed growth(GO:0080113)
0.0 0.6 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.0 0.2 GO:0010230 alternative respiration(GO:0010230)
0.0 0.0 GO:1900034 regulation of cellular response to heat(GO:1900034)
0.0 1.0 GO:0009910 negative regulation of flower development(GO:0009910)
0.0 0.5 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.0 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.0 0.2 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.0 0.1 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.0 0.0 GO:0010589 leaf proximal/distal pattern formation(GO:0010589) viral gene silencing in virus induced gene silencing(GO:0060145)
0.0 0.1 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.0 1.0 GO:0006338 chromatin remodeling(GO:0006338)
0.0 0.2 GO:0010262 somatic embryogenesis(GO:0010262)
0.0 0.4 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.6 GO:0010109 regulation of photosynthesis(GO:0010109)
0.0 0.2 GO:0080086 stamen filament development(GO:0080086)
0.0 0.2 GO:0009231 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.0 0.1 GO:0052126 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.1 GO:0009643 photosynthetic acclimation(GO:0009643)
0.0 0.1 GO:0016574 histone ubiquitination(GO:0016574)
0.0 0.2 GO:0071329 cellular response to disaccharide stimulus(GO:0071324) cellular response to sucrose stimulus(GO:0071329)
0.0 0.5 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.0 0.4 GO:0009395 phospholipid catabolic process(GO:0009395)
0.0 0.2 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.5 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.0 0.0 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.0 0.1 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.0 0.1 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.0 0.4 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.0 0.2 GO:0046451 lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 0.2 GO:0007050 cell cycle arrest(GO:0007050)
0.0 0.1 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.0 1.6 GO:0080167 response to karrikin(GO:0080167)
0.0 0.2 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.1 GO:0010047 fruit dehiscence(GO:0010047)
0.0 0.5 GO:0005982 starch metabolic process(GO:0005982)
0.0 0.4 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 0.1 GO:1990641 response to iron ion starvation(GO:1990641)
0.0 0.1 GO:0009554 megasporogenesis(GO:0009554)
0.0 0.1 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 0.3 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.2 GO:0006415 translational termination(GO:0006415)
0.0 0.1 GO:1902221 L-phenylalanine metabolic process(GO:0006558) erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process(GO:1902221)
0.0 0.1 GO:0007130 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.0 0.2 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.0 0.1 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.3 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.0 0.5 GO:0090487 glutathione metabolic process(GO:0006749) toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.3 GO:0030091 protein repair(GO:0030091)
0.0 0.4 GO:0010017 red or far-red light signaling pathway(GO:0010017)
0.0 0.0 GO:0043467 regulation of generation of precursor metabolites and energy(GO:0043467)
0.0 0.3 GO:0035196 production of miRNAs involved in gene silencing by miRNA(GO:0035196)
0.0 0.1 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.2 GO:0010207 photosystem II assembly(GO:0010207)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0032432 actin filament bundle(GO:0032432)
0.1 1.7 GO:0000786 nucleosome(GO:0000786)
0.1 0.6 GO:0005776 autophagosome(GO:0005776)
0.1 0.4 GO:0009569 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.1 0.5 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 0.2 GO:0030874 nucleolar chromatin(GO:0030874)
0.1 1.2 GO:0031965 nuclear membrane(GO:0031965)
0.1 0.5 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 0.5 GO:0035619 root hair tip(GO:0035619)
0.1 0.4 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.1 0.2 GO:0070847 core mediator complex(GO:0070847)
0.1 0.3 GO:0030062 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
0.1 0.3 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 0.3 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 0.2 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.0 3.0 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.4 GO:0043189 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.8 GO:0035097 histone methyltransferase complex(GO:0035097)
0.0 0.8 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.1 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 0.1 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.0 0.5 GO:0000792 heterochromatin(GO:0000792)
0.0 0.1 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.6 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.2 GO:0030897 HOPS complex(GO:0030897)
0.0 0.2 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 1.0 GO:0010319 stromule(GO:0010319)
0.0 0.5 GO:0032592 integral component of mitochondrial membrane(GO:0032592)
0.0 0.2 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 0.3 GO:0031902 late endosome membrane(GO:0031902)
0.0 1.2 GO:0009524 phragmoplast(GO:0009524)
0.0 0.1 GO:0072686 mitotic spindle(GO:0072686)
0.0 0.3 GO:0045281 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.0 0.1 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 2.7 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.1 GO:0034990 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.0 0.7 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.4 GO:0005764 lysosome(GO:0005764)
0.0 0.4 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.0 0.0 GO:0032807 DNA ligase IV complex(GO:0032807)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.7 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.4 1.7 GO:0047215 indole-3-acetate beta-glucosyltransferase activity(GO:0047215) UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.3 2.4 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.3 1.7 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.3 1.2 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.3 0.5 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.3 2.1 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.2 0.7 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.2 0.6 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.2 1.2 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.2 0.6 GO:0004046 aminoacylase activity(GO:0004046)
0.2 0.7 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity(GO:0010309)
0.2 0.7 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.2 1.1 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.2 0.6 GO:0050815 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.1 0.8 GO:0080041 ADP-sugar diphosphatase activity(GO:0019144) ADP-ribose pyrophosphohydrolase activity(GO:0080041)
0.1 1.2 GO:0004096 catalase activity(GO:0004096)
0.1 0.4 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.1 0.8 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.5 GO:0004556 alpha-amylase activity(GO:0004556)
0.1 0.8 GO:0004792 thiosulfate sulfurtransferase activity(GO:0004792)
0.1 0.5 GO:0030523 dihydrolipoamide S-acyltransferase activity(GO:0030523)
0.1 1.5 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.1 1.4 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.1 1.7 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 0.5 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.1 0.3 GO:0045174 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.1 0.4 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.1 0.9 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.1 1.2 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.1 0.3 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.1 0.5 GO:0050113 inositol oxygenase activity(GO:0050113)
0.1 0.5 GO:0008184 glycogen phosphorylase activity(GO:0008184)
0.1 0.3 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.1 0.4 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.1 0.4 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.1 0.3 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.1 0.8 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.1 0.6 GO:0016151 nickel cation binding(GO:0016151)
0.1 0.5 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.1 1.0 GO:0032452 histone demethylase activity(GO:0032452) histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 2.8 GO:0016597 amino acid binding(GO:0016597)
0.1 0.7 GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor(GO:0016647)
0.1 0.9 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.1 0.5 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.1 0.7 GO:1990137 plant seed peroxidase activity(GO:1990137)
0.1 0.3 GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity(GO:0004719)
0.1 0.6 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 0.6 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 0.6 GO:0019158 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 0.2 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.1 0.3 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.4 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.1 0.7 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.1 0.9 GO:2001070 starch binding(GO:2001070)
0.1 0.5 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.1 0.3 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
0.1 0.9 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.1 0.2 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.1 0.3 GO:0022840 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.1 1.4 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 0.4 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.1 0.3 GO:0030371 translation repressor activity(GO:0030371)
0.1 0.3 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.1 0.2 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.1 0.7 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.1 0.2 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 0.5 GO:0072349 modified amino acid transmembrane transporter activity(GO:0072349)
0.1 1.1 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.4 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.3 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.0 0.3 GO:0004849 uridine kinase activity(GO:0004849)
0.0 0.9 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.3 GO:0030527 structural constituent of chromatin(GO:0030527)
0.0 0.1 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.0 0.3 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.0 0.8 GO:0003951 NAD+ kinase activity(GO:0003951)
0.0 0.2 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.0 0.3 GO:0004126 cytidine deaminase activity(GO:0004126)
0.0 0.3 GO:0051139 metal ion:proton antiporter activity(GO:0051139)
0.0 0.6 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 0.3 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.2 GO:0003935 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.0 0.2 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.2 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.0 0.4 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.7 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 0.1 GO:0008138 protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.0 0.4 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.3 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.0 1.5 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.7 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 0.2 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.0 0.5 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.4 GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730)
0.0 0.7 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.0 0.4 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.0 0.2 GO:0008022 protein C-terminus binding(GO:0008022)
0.0 0.9 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.6 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.2 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.1 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.0 0.3 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.2 GO:0008083 growth factor activity(GO:0008083)
0.0 0.2 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.0 0.2 GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.0 0.7 GO:0097602 cullin family protein binding(GO:0097602)
0.0 1.5 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 0.2 GO:0009916 alternative oxidase activity(GO:0009916)
0.0 0.4 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.6 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 0.2 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.2 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 0.3 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.1 GO:0008517 folic acid transporter activity(GO:0008517)
0.0 1.5 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.1 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.3 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.1 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.4 GO:0008143 poly(A) binding(GO:0008143)
0.0 0.1 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.0 0.2 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 0.9 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.2 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.3 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.2 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0 0.2 GO:0031420 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 1.0 GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors(GO:0016706)
0.0 0.5 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.0 GO:0016208 AMP binding(GO:0016208)
0.0 0.4 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.1 GO:0043765 T/G mismatch-specific endonuclease activity(GO:0043765)
0.0 0.3 GO:0015248 sterol transporter activity(GO:0015248)
0.0 0.2 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 1.8 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.6 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 2.0 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.0 0.1 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.0 0.0 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.1 GO:0004373 glycogen (starch) synthase activity(GO:0004373)
0.0 0.2 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 0.5 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.1 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.1 0.7 PID MTOR 4PATHWAY mTOR signaling pathway
0.1 0.2 PID IL12 2PATHWAY IL12-mediated signaling events
0.0 0.2 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II
0.0 0.1 PID ATR PATHWAY ATR signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.1 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.2 0.6 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.1 0.3 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.0 0.1 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.0 0.1 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.0 0.3 REACTOME DNA REPAIR Genes involved in DNA Repair
0.0 0.2 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.1 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes