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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G18350

Z-value: 2.19

Transcription factors associated with AT2G18350

Gene Symbol Gene ID Gene Info
AT2G18350
AT2G18350 homeobox protein 24

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HB24arTal_v1_Chr2_-_7972396_7972396-0.214.7e-01Click!

Activity profile of AT2G18350 motif

Sorted Z-values of AT2G18350 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_+_28975255_28975255 3.24 AT1G77120.1
ADH1
alcohol dehydrogenase 1
arTal_v1_Chr1_+_18546086_18546165 3.15 AT1G50050.2
AT1G50050.1
AT1G50050
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
arTal_v1_Chr3_+_10565674_10565674 2.78 AT3G28300.1
AT14A
transmembrane protein, putative (DUF677)
arTal_v1_Chr2_-_6493512_6493512 2.70 AT2G15020.1
AT2G15020
hypothetical protein
arTal_v1_Chr3_+_15983199_15983199 2.53 AT3G44300.1
NIT2
nitrilase 2
arTal_v1_Chr5_-_6725966_6725966 2.33 AT5G19890.1
AT5G19890
Peroxidase superfamily protein
arTal_v1_Chr1_-_4651549_4651549 2.27 AT1G13600.1
bZIP58
basic leucine-zipper 58
arTal_v1_Chr5_-_22115539_22115539 2.21 AT5G54470.1
BBX29
B-box type zinc finger family protein
arTal_v1_Chr3_-_18718396_18718396 2.16 AT3G50440.1
MES10
methylesterase
arTal_v1_Chr3_-_2569700_2569700 2.10 AT3G08040.2
AT3G08040.1
FRD3
MATE efflux family protein
arTal_v1_Chr2_-_14310608_14310608 2.10 AT2G33830.2
AT2G33830
Dormancy/auxin associated family protein
arTal_v1_Chr4_+_8827600_8827710 2.08 AT4G15430.2
AT4G15430.1
AT4G15430
ERD (early-responsive to dehydration stress) family protein
arTal_v1_Chr2_-_14310339_14310339 2.05 AT2G33830.1
AT2G33830
Dormancy/auxin associated family protein
arTal_v1_Chr5_-_14753088_14753088 2.03 AT5G37260.1
RVE2
Homeodomain-like superfamily protein
arTal_v1_Chr3_+_22216540_22216540 2.01 AT3G60140.2
AT3G60140.1
DIN2
Glycosyl hydrolase superfamily protein
arTal_v1_Chr2_-_18811085_18811125 2.00 AT2G45660.2
AT2G45660.1
AGL20
AGAMOUS-like 20
arTal_v1_Chr4_+_17639_17784 1.99 AT4G00050.1
AT4G00050.3
AT4G00050.2
UNE10
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr4_+_8804070_8804120 1.98 AT4G15393.2
AT4G15393.3
AT4G15393.1
CYP702A5
cytochrome P450, family 702, subfamily A, polypeptide 5
arTal_v1_Chr4_+_9028262_9028262 1.96 AT4G15910.1
DI21
drought-induced 21
arTal_v1_Chr3_-_3963984_3963984 1.81 AT3G12500.1
HCHIB
basic chitinase
arTal_v1_Chr5_-_6976036_6976036 1.78 AT5G20630.1
GER3
germin 3
arTal_v1_Chr3_+_5243432_5243432 1.75 AT3G15510.1
NAC2
NAC domain containing protein 2
arTal_v1_Chr3_-_22915393_22915393 1.73 AT3G61890.1
HB-12
homeobox 12
arTal_v1_Chr5_+_17951442_17951449 1.66 AT5G44565.2
AT5G44565.1
AT5G44565.3
AT5G44565
transmembrane protein
arTal_v1_Chr4_-_12345652_12345652 1.64 AT4G23700.2
CHX17
cation/H+ exchanger 17
arTal_v1_Chr4_-_12346051_12346051 1.63 AT4G23700.1
CHX17
cation/H+ exchanger 17
arTal_v1_Chr1_-_3518035_3518035 1.61 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
arTal_v1_Chr2_+_5074384_5074384 1.61 AT2G12490.1
AT2G12490

arTal_v1_Chr3_-_20629295_20629295 1.60 AT3G55610.1
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
arTal_v1_Chr3_-_20629093_20629093 1.54 AT3G55610.2
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
arTal_v1_Chr2_-_18191280_18191348 1.52 AT2G43920.3
AT2G43920.4
AT2G43920.1
AT2G43920.2
HOL2
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr3_+_1693548_1693548 1.49 AT3G05727.1
AT3G05727
S locus-related glycoprotein 1 (SLR1) binding pollen coat protein family
arTal_v1_Chr4_-_18551183_18551183 1.49 AT4G40010.1
SNRK2.7
SNF1-related protein kinase 2.7
arTal_v1_Chr4_+_13163929_13163929 1.49 AT4G25910.1
NFU3
NFU domain protein 3
arTal_v1_Chr3_-_8085669_8085669 1.48 AT3G22840.1
ELIP1
Chlorophyll A-B binding family protein
arTal_v1_Chr1_-_21626402_21626402 1.46 AT1G58290.1
HEMA1
Glutamyl-tRNA reductase family protein
arTal_v1_Chr3_-_9642779_9642779 1.46 AT3G26310.1
CYP71B35
cytochrome P450, family 71, subfamily B, polypeptide 35
arTal_v1_Chr5_+_17968092_17968092 1.43 AT5G44572.1
AT5G44572
transmembrane protein
arTal_v1_Chr1_+_24554413_24554413 1.43 AT1G65960.4
GAD2
glutamate decarboxylase 2
arTal_v1_Chr3_-_17506124_17506124 1.42 AT3G47500.1
CDF3
cycling DOF factor 3
arTal_v1_Chr1_+_29759030_29759158 1.41 AT1G79110.2
AT1G79110.3
AT1G79110.1
BRG2
zinc ion binding protein
arTal_v1_Chr1_+_21868190_21868190 1.38 AT1G59530.1
bZIP4
basic leucine-zipper 4
arTal_v1_Chr5_+_17977172_17977172 1.37 AT5G44578.2
AT5G44578.1
AT5G44578
transmembrane protein
arTal_v1_Chr1_+_25016402_25016402 1.37 AT1G67030.1
ZFP6
zinc finger protein 6
arTal_v1_Chr2_-_19287590_19287590 1.34 AT2G46940.1
AT2G46940
fold protein
arTal_v1_Chr2_-_15092353_15092415 1.34 AT2G35940.3
AT2G35940.1
BLH1
BEL1-like homeodomain 1
arTal_v1_Chr2_-_18190665_18190665 1.34 AT2G43920.6
AT2G43920.5
HOL2
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_+_24551807_24551807 1.33 AT1G65960.3
AT1G65960.1
GAD2
glutamate decarboxylase 2
arTal_v1_Chr1_-_21630118_21630118 1.33 AT1G58300.1
HO4
heme oxygenase 4
arTal_v1_Chr4_-_9583290_9583290 1.33 AT4G17030.1
EXLB1
expansin-like B1
arTal_v1_Chr5_+_22515391_22515440 1.32 AT5G55580.1
AT5G55580.3
AT5G55580.2
AT5G55580
Mitochondrial transcription termination factor family protein
arTal_v1_Chr4_-_7553332_7553375 1.31 AT4G12910.2
AT4G12910.1
scpl20
serine carboxypeptidase-like 20
arTal_v1_Chr2_+_2015624_2015706 1.28 AT2G05510.1
AT2G05510.3
AT2G05510.4
AT2G05510.2
AT2G05510.6
AT2G05510.5
AT2G05510
Glycine-rich protein family
arTal_v1_Chr3_-_7709933_7709933 1.27 AT3G21890.1
BBX31
B-box type zinc finger family protein
arTal_v1_Chr3_+_19624278_19624287 1.26 AT3G52920.1
AT3G52920.2
AT3G52920
transcriptional activator (DUF662)
arTal_v1_Chr1_+_17847042_17847042 1.26 AT1G48300.1
DGAT3
diacylglycerol acyltransferase
arTal_v1_Chr1_+_7823066_7823066 1.26 AT1G22160.1
AT1G22160
senescence-associated family protein (DUF581)
arTal_v1_Chr3_+_19720077_19720165 1.26 AT3G53210.1
AT3G53210.2
AT3G53210.3
UMAMIT6
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr3_-_10790553_10790553 1.25 AT3G28740.1
CYP81D11
Cytochrome P450 superfamily protein
arTal_v1_Chr4_-_13501701_13501701 1.25 AT4G26850.1
VTC2
GDP-L-galactose phosphorylase 1
arTal_v1_Chr3_+_8941066_8941066 1.24 AT3G24520.1
HSFC1
heat shock transcription factor C1
arTal_v1_Chr1_-_22417244_22417312 1.23 AT1G60890.2
AT1G60890.1
AT1G60890
Phosphatidylinositol-4-phosphate 5-kinase family protein
arTal_v1_Chr5_+_25248690_25248690 1.23 AT5G62900.1
AT5G62900
basic-leucine zipper transcription factor K
arTal_v1_Chr1_+_24552003_24552003 1.23 AT1G65960.2
GAD2
glutamate decarboxylase 2
arTal_v1_Chr5_-_21724642_21724701 1.23 AT5G53490.3
AT5G53490.2
AT5G53490.1
AT5G53490.4
AT5G53490
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr2_+_18346306_18346306 1.21 AT2G44460.1
BGLU28
beta glucosidase 28
arTal_v1_Chr1_-_507268_507268 1.21 AT1G02460.1
AT1G02460
Pectin lyase-like superfamily protein
arTal_v1_Chr2_-_15092178_15092178 1.21 AT2G35940.2
BLH1
BEL1-like homeodomain 1
arTal_v1_Chr2_-_19361162_19361162 1.21 AT2G47160.2
BOR1
HCO3- transporter family
arTal_v1_Chr3_-_82182_82182 1.21 AT3G01260.1
AT3G01260
Galactose mutarotase-like superfamily protein
arTal_v1_Chr2_-_19361328_19361328 1.20 AT2G47160.1
BOR1
HCO3- transporter family
arTal_v1_Chr1_+_13026206_13026289 1.19 AT1G35420.1
AT1G35420.2
AT1G35420.3
AT1G35420
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_-_12745748_12745748 1.19 AT1G34760.1
AT1G34760.2
GRF11
general regulatory factor 11
arTal_v1_Chr3_+_10576961_10576961 1.19 AT3G28310.1
AT3G28310
hypothetical protein (DUF677)
arTal_v1_Chr1_+_17766738_17766738 1.19 AT1G48100.1
AT1G48100
Pectin lyase-like superfamily protein
arTal_v1_Chr2_+_18347765_18347765 1.18 AT2G44460.2
BGLU28
beta glucosidase 28
arTal_v1_Chr1_-_6074525_6074525 1.18 AT1G17665.1
AT1G17665
CA-responsive protein
arTal_v1_Chr1_-_28466971_28466971 1.18 AT1G75820.1
CLV1
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr5_+_3347381_3347437 1.17 AT5G10580.3
AT5G10580.4
AT5G10580.1
AT5G10580.2
AT5G10580
plant/protein (Protein of unknown function, DUF599)
arTal_v1_Chr1_+_16263805_16263805 1.17 AT1G43160.1
RAP2.6
related to AP2 6
arTal_v1_Chr5_+_18856454_18856454 1.16 AT5G46500.4
AT5G46500.3
AT5G46500.1
AT5G46500
protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein
arTal_v1_Chr2_-_856725_856725 1.15 AT2G02950.1
PKS1
phytochrome kinase substrate 1
arTal_v1_Chr1_-_23226983_23226983 1.15 AT1G62710.1
BETA-VPE
beta vacuolar processing enzyme
arTal_v1_Chr1_+_25701770_25701770 1.14 AT1G68500.1
AT1G68500
hypothetical protein
arTal_v1_Chr3_+_11810726_11810726 1.13 AT3G30180.1
BR6OX2
brassinosteroid-6-oxidase 2
arTal_v1_Chr5_+_16579936_16579936 1.13 AT5G41410.1
BEL1
POX (plant homeobox) family protein
arTal_v1_Chr3_-_16558169_16558169 1.13 AT3G45210.1
AT3G45210
transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
arTal_v1_Chr1_-_9451768_9451768 1.13 AT1G27200.1
AT1G27200
glycosyltransferase family protein (DUF23)
arTal_v1_Chr5_+_22085998_22085998 1.12 AT5G54390.1
HL
HAL2-like protein
arTal_v1_Chr1_-_24996117_24996359 1.11 AT1G66970.2
AT1G66970.3
AT1G66970.1
SVL2
SHV3-like 2
arTal_v1_Chr1_+_22737475_22737475 1.10 AT1G61620.1
AT1G61620
phosphoinositide binding protein
arTal_v1_Chr1_-_17706460_17706460 1.10 AT1G48000.1
MYB112
myb domain protein 112
arTal_v1_Chr1_+_27940594_27940594 1.09 AT1G74320.1
AT1G74320
Protein kinase superfamily protein
arTal_v1_Chr1_+_12256474_12256493 1.08 AT1G33790.3
AT1G33790.4
AT1G33790.5
AT1G33790
jacalin lectin family protein
arTal_v1_Chr2_+_17228733_17228760 1.07 AT2G41340.2
AT2G41340.3
AT2G41340.1
RPB5D
RNA polymerase II fifth largest subunit, D
arTal_v1_Chr1_-_9251659_9251659 1.06 AT1G26761.1
AT1G26761
Arabinanase/levansucrase/invertase
arTal_v1_Chr5_+_6461268_6461391 1.05 AT5G19210.2
AT5G19210.3
AT5G19210.1
AT5G19210
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr2_+_417427_417427 1.05 AT2G01910.2
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
arTal_v1_Chr2_-_14131143_14131224 1.04 AT2G33340.3
AT2G33340.2
AT2G33340.1
MAC3B
MOS4-associated complex 3B
arTal_v1_Chr4_-_15991536_15991633 1.04 AT4G33150.1
AT4G33150.2
AT4G33150
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
arTal_v1_Chr4_-_1197630_1197630 1.04 AT4G02710.1
NET1C
Kinase interacting (KIP1-like) family protein
arTal_v1_Chr3_-_14879792_14879792 1.03 AT3G42790.1
AL3
alfin-like 3
arTal_v1_Chr1_-_467873_467880 1.03 AT1G02340.2
AT1G02340.1
HFR1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr3_-_11468857_11468857 1.03 AT3G29636.1
AT3G29636
transferase-like protein
arTal_v1_Chr1_+_12256664_12256664 1.03 AT1G33790.1
AT1G33790.2
AT1G33790
jacalin lectin family protein
arTal_v1_Chr1_-_27257081_27257081 1.02 AT1G72410.2
AT1G72410.1
AT1G72410
COP1-interacting protein-like protein
arTal_v1_Chr3_+_17558793_17558793 1.02 AT3G47620.1
TCP14
TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14
arTal_v1_Chr1_-_19690589_19690589 1.02 AT1G52880.1
NAM
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
arTal_v1_Chr1_-_11595982_11596056 1.02 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_-_18026077_18026077 1.02 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
arTal_v1_Chr1_-_29147498_29147646 1.02 AT1G77580.1
AT1G77580.3
AT1G77580.4
AT1G77580.2
AT1G77580
filament-like protein (DUF869)
arTal_v1_Chr5_-_20775701_20775739 1.01 AT5G51100.2
AT5G51100.3
AT5G51100.4
AT5G51100.5
AT5G51100.1
FSD2
Fe superoxide dismutase 2
arTal_v1_Chr3_+_17549111_17549111 1.01 AT3G47610.1
AT3G47610
transcription regulator/ zinc ion binding protein
arTal_v1_Chr3_+_5081780_5081908 1.01 AT3G15095.2
AT3G15095.1
AT3G15095.3
HCF243
Serine/Threonine-kinase pakA-like protein
arTal_v1_Chr3_-_7993588_7993588 1.01 AT3G22550.1
AT3G22550
NAD(P)H-quinone oxidoreductase subunit, putative (DUF581)
arTal_v1_Chr1_+_23527570_23527570 1.00 AT1G63440.1
HMA5
heavy metal atpase 5
arTal_v1_Chr5_-_1409893_1409935 1.00 AT5G04850.2
AT5G04850.1
VPS60.2
SNF7 family protein
arTal_v1_Chr5_-_25775429_25775635 0.99 AT5G64460.4
AT5G64460.6
AT5G64460.9
AT5G64460.7
AT5G64460.8
AT5G64460.1
AT5G64460.10
AT5G64460.11
AT5G64460.5
AT5G64460.3
AT5G64460.2
AT5G64460
Phosphoglycerate mutase family protein
arTal_v1_Chr5_+_1727368_1727368 0.98 AT5G05750.1
AT5G05750
DNAJ heat shock N-terminal domain-containing protein
arTal_v1_Chr1_+_17686990_17686990 0.97 AT1G47970.1
AT1G47970
nucleolin
arTal_v1_Chr5_+_4427783_4427783 0.96 AT5G13720.1
AT5G13720
Uncharacterized protein family (UPF0114)
arTal_v1_Chr3_-_20048190_20048190 0.96 AT3G54140.2
PTR1
peptide transporter 1
arTal_v1_Chr4_+_18130237_18130237 0.96 AT4G38860.1
AT4G38860
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_+_12256990_12256990 0.95 AT1G33790.6
AT1G33790
jacalin lectin family protein
arTal_v1_Chr5_-_10092686_10092721 0.95 AT5G28080.7
AT5G28080.1
AT5G28080.6
AT5G28080.2
AT5G28080.5
AT5G28080.3
AT5G28080.4
AT5G28080.8
WNK9
Protein kinase superfamily protein
arTal_v1_Chr4_-_5964054_5964054 0.95 AT4G09420.1
AT4G09420
Disease resistance protein (TIR-NBS class)
arTal_v1_Chr4_-_8079408_8079408 0.94 AT4G13980.1
AT-HSFA5
winged-helix DNA-binding transcription factor family protein
arTal_v1_Chr5_+_23940745_23940782 0.93 AT5G59350.1
AT5G59350.2
AT5G59350.3
AT5G59350
transmembrane protein
arTal_v1_Chr2_+_821553_821553 0.93 AT2G02840.1
AT2G02840
nucleic acid/zinc ion-binding protein
arTal_v1_Chr2_-_16833294_16833294 0.93 AT2G40300.1
FER4
ferritin 4
arTal_v1_Chr2_-_7165266_7165410 0.93 AT2G16530.2
AT2G16530.5
AT2G16530.4
AT2G16530.1
AT2G16530.3
AT2G16530
3-oxo-5-alpha-steroid 4-dehydrogenase family protein
arTal_v1_Chr3_-_20048745_20048745 0.93 AT3G54140.1
PTR1
peptide transporter 1
arTal_v1_Chr5_-_761840_761840 0.93 AT5G03200.1
LUL1
RING/U-box superfamily protein
arTal_v1_Chr5_-_6993948_6993948 0.93 AT5G20670.1
AT5G20670
DUF1677 family protein (DUF1677)
arTal_v1_Chr5_+_903470_903472 0.93 AT5G03570.1
AT5G03570.3
IREG2
iron regulated 2
arTal_v1_Chr1_-_10356482_10356482 0.93 AT1G29640.1
AT1G29640
senescence regulator (Protein of unknown function, DUF584)
arTal_v1_Chr1_-_2143977_2143977 0.93 AT1G06980.1
AT1G06980
6,7-dimethyl-8-ribityllumazine synthase
arTal_v1_Chr1_-_2971457_2971568 0.92 AT1G09195.15
AT1G09195.11
AT1G09195.12
AT1G09195.2
AT1G09195.13
AT1G09195.1
AT1G09195.14
AT1G09195.7
AT1G09195.8
AT1G09195.3
AT1G09195.9
AT1G09195.6
AT1G09195.5
AT1G09195.10
AT1G09195.4
AT1G09195
Ppx-GppA phosphatase
arTal_v1_Chr1_-_13900831_13900831 0.92 AT1G36730.1
AT1G36730
Translation initiation factor IF2/IF5
arTal_v1_Chr1_-_8935544_8935544 0.92 AT1G25440.1
BBX15
B-box type zinc finger protein with CCT domain-containing protein
arTal_v1_Chr4_+_11880080_11880080 0.92 AT4G22560.1
AT4G22560
sulfated surface-like glycoprotein
arTal_v1_Chr3_-_9979843_9979843 0.92 AT3G27050.1
AT3G27050
plant/protein
arTal_v1_Chr5_+_5995479_5995479 0.92 AT5G18130.2
AT5G18130
transmembrane protein
arTal_v1_Chr4_+_8392825_8392825 0.92 AT4G14630.1
GLP9
germin-like protein 9
arTal_v1_Chr3_-_8639580_8639580 0.92 AT3G23910.1
AT3G23910
reverse transcriptase-like protein
arTal_v1_Chr4_-_7669250_7669250 0.91 AT4G13200.1
AT4G13200
hypothetical protein
arTal_v1_Chr4_+_11941001_11941001 0.91 AT4G22730.2
AT4G22730.1
AT4G22730
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_+_16297465_16297597 0.91 AT5G40720.1
AT5G40720.3
AT5G40720
C3H4 type zinc finger protein (DUF23)
arTal_v1_Chr2_+_416021_416021 0.91 AT2G01910.1
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
arTal_v1_Chr5_+_6670275_6670275 0.90 AT5G19730.1
AT5G19730
Pectin lyase-like superfamily protein
arTal_v1_Chr4_-_15991202_15991202 0.90 AT4G33150.4
AT4G33150
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
arTal_v1_Chr1_+_21043348_21043348 0.90 AT1G56220.2
AT1G56220.1
AT1G56220
Dormancy/auxin associated family protein
arTal_v1_Chr3_-_3044919_3044989 0.90 AT3G09920.3
AT3G09920.1
AT3G09920.2
AT3G09920.4
PIP5K9
phosphatidyl inositol monophosphate 5 kinase
arTal_v1_Chr3_+_15430660_15430660 0.90 AT3G43540.1
AT3G43540.2
AT3G43540
initiation factor 4F subunit (DUF1350)
arTal_v1_Chr1_+_3530353_3530451 0.90 AT1G10657.4
AT1G10657.2
AT1G10657.3
AT1G10657.1
AT1G10657
transmembrane protein
arTal_v1_Chr1_-_6860376_6860563 0.89 AT1G19835.1
AT1G19835.4
AT1G19835.6
AT1G19835.3
AT1G19835
filament-like protein (DUF869)
arTal_v1_Chr1_+_19484221_19484465 0.89 AT1G52320.5
AT1G52320.2
AT1G52320.1
AT1G52320
kinesin-like protein
arTal_v1_Chr3_+_10125659_10125659 0.89 AT3G27350.3
AT3G27350.2
AT3G27350
transcriptional regulator ATRX-like protein
arTal_v1_Chr1_+_21167565_21167565 0.89 AT1G56510.1
WRR4
Disease resistance protein (TIR-NBS-LRR class)
arTal_v1_Chr5_+_19309227_19309227 0.89 AT5G47640.1
NF-YB2
nuclear factor Y, subunit B2
arTal_v1_Chr1_+_14158452_14158452 0.89 AT1G37130.1
NIA2
nitrate reductase 2
arTal_v1_Chr3_+_7789901_7789993 0.89 AT3G22104.2
AT3G22104.3
AT3G22104
Phototropic-responsive NPH3 family protein
arTal_v1_Chr4_-_2481590_2481590 0.88 AT4G04890.2
PDF2
protodermal factor 2
arTal_v1_Chr1_+_21042951_21042977 0.88 AT1G56220.4
AT1G56220.5
AT1G56220.3
AT1G56220
Dormancy/auxin associated family protein
arTal_v1_Chr3_+_8044410_8044427 0.88 AT3G22760.2
AT3G22760.1
SOL1
Tesmin/TSO1-like CXC domain-containing protein
arTal_v1_Chr5_+_7703041_7703092 0.88 AT5G23010.2
AT5G23010.1
AT5G23010.3
MAM1
methylthioalkylmalate synthase 1
arTal_v1_Chr4_-_11732674_11732674 0.87 AT4G22150.1
PUX3
UBA/UBX domain protein
arTal_v1_Chr3_+_4112834_4112834 0.87 AT3G12915.1
AT3G12915.2
AT3G12915
Ribosomal protein S5/Elongation factor G/III/V family protein
arTal_v1_Chr1_-_11719988_11719988 0.87 AT1G32450.1
NRT1.5
nitrate transporter 1.5
arTal_v1_Chr5_+_8428078_8428078 0.87 AT5G24610.1
AT5G24610
cyclic AMP-responsive element-binding protein
arTal_v1_Chr5_+_5995323_5995323 0.86 AT5G18130.1
AT5G18130
transmembrane protein
arTal_v1_Chr1_-_1490947_1491005 0.86 AT1G05160.2
AT1G05160.1
CYP88A3
cytochrome P450, family 88, subfamily A, polypeptide 3
arTal_v1_Chr4_+_16944878_16944941 0.86 AT4G35770.1
AT4G35770.2
AT4G35770.5
AT4G35770.6
AT4G35770.4
AT4G35770.3
SEN1
Rhodanese/Cell cycle control phosphatase superfamily protein
arTal_v1_Chr2_+_1066578_1066578 0.86 AT2G03510.1
AT2G03510
SPFH/Band 7/PHB domain-containing membrane-associated protein family
arTal_v1_Chr3_-_8638735_8638735 0.86 AT3G23910.2
AT3G23910
reverse transcriptase-like protein
arTal_v1_Chr1_-_4746911_4746956 0.85 AT1G13860.2
AT1G13860.4
AT1G13860.5
AT1G13860.3
AT1G13860.1
QUL1
QUASIMODO2 LIKE 1
arTal_v1_Chr5_-_18435469_18435524 0.85 AT5G45500.3
AT5G45500.6
AT5G45500.2
AT5G45500.9
AT5G45500.1
AT5G45500.4
AT5G45500.7
AT5G45500.8
AT5G45500.5
AT5G45500
RNI-like superfamily protein
arTal_v1_Chr1_-_8570505_8570580 0.85 AT1G24190.1
AT1G24190.3
AT1G24190.2
SNL3
SIN3-like 3
arTal_v1_Chr3_-_6163453_6163453 0.84 AT3G18010.1
WOX1
WUSCHEL related homeobox 1
arTal_v1_Chr1_-_28792640_28792719 0.84 AT1G76710.2
AT1G76710.4
AT1G76710.1
AT1G76710.3
ASHH1
SET domain group 26
arTal_v1_Chr2_+_7382805_7382859 0.84 AT2G16990.2
AT2G16990.5
AT2G16990.4
AT2G16990.3
AT2G16990.1
AT2G16990.7
AT2G16990.6
AT2G16990.8
AT2G16990
Major facilitator superfamily protein
arTal_v1_Chr5_+_16789624_16789631 0.84 AT5G41960.1
AT5G41960.2
AT5G41960
zinc finger matrin-type protein
arTal_v1_Chr4_-_2482447_2482447 0.84 AT4G04890.1
PDF2
protodermal factor 2
arTal_v1_Chr1_+_29815470_29815506 0.84 AT1G79270.1
AT1G79270.3
AT1G79270.2
AT1G79270.4
ECT8
evolutionarily conserved C-terminal region 8
arTal_v1_Chr5_+_23225951_23225951 0.83 AT5G57340.2
AT5G57340.1
AT5G57340
ras guanine nucleotide exchange factor Q-like protein
arTal_v1_Chr5_-_9174598_9174598 0.83 AT5G26230.1
MAKR1
membrane-associated kinase regulator
arTal_v1_Chr3_-_18456125_18456125 0.83 AT3G49760.1
bZIP5
basic leucine-zipper 5
arTal_v1_Chr3_+_10447845_10447947 0.83 AT3G28070.1
AT3G28070.4
AT3G28070.3
AT3G28070.2
AT3G28070.5
UMAMIT46
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr2_-_8206478_8206478 0.83 AT2G18940.1
AT2G18940
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_+_21275889_21275956 0.83 AT5G52410.3
AT5G52410.1
AT5G52410.2
AT5G52410
oxidoreductase/transition metal ion-binding protein
arTal_v1_Chr5_+_904693_904693 0.83 AT5G03570.4
IREG2
iron regulated 2
arTal_v1_Chr2_-_5541355_5541479 0.83 AT2G13360.2
AT2G13360.1
AT2G13360.3
AGT
alanine:glyoxylate aminotransferase
arTal_v1_Chr5_+_16675582_16675868 0.83 AT5G41700.5
AT5G41700.1
AT5G41700.3
AT5G41700.4
AT5G41700.2
UBC8
ubiquitin conjugating enzyme 8
arTal_v1_Chr4_+_585598_585610 0.82 AT4G01430.1
AT4G01430.2
AT4G01430.3
UMAMIT29
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr2_+_324365_324365 0.82 AT2G01735.2
AT2G01735.1
RIE1
RING-finger protein for embryogenesi
arTal_v1_Chr5_+_9475679_9475682 0.82 AT5G26920.1
AT5G26920.2
AT5G26920.3
CBP60G
Cam-binding protein 60-like G
arTal_v1_Chr2_+_8183638_8183638 0.82 AT2G18890.1
AT2G18890.3
AT2G18890
Protein kinase superfamily protein
arTal_v1_Chr1_-_25190694_25190694 0.82 AT1G67280.1
AT1G67280.2
AT1G67280
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein
arTal_v1_Chr1_-_22756295_22756387 0.82 AT1G61660.2
AT1G61660.4
AT1G61660.3
AT1G61660.5
AT1G61660.6
AT1G61660.1
AT1G61660.7
AT1G61660
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr5_-_716347_716390 0.82 AT5G03050.1
AT5G03050.2
AT5G03050
knotted 1-binding protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G18350

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.5 GO:0035444 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
0.6 3.2 GO:0031000 response to caffeine(GO:0031000) response to alkaloid(GO:0043279)
0.6 1.8 GO:0071281 cellular response to iron ion(GO:0071281)
0.5 3.1 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.5 2.6 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system(GO:0010201)
0.5 2.4 GO:0046713 borate transport(GO:0046713)
0.5 1.8 GO:0009871 jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway(GO:0009871)
0.4 3.1 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.4 1.3 GO:0006788 heme oxidation(GO:0006788)
0.4 1.7 GO:0071963 establishment or maintenance of cell polarity regulating cell shape(GO:0071963) regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000769)
0.4 1.5 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.4 0.7 GO:0035865 cellular response to potassium ion(GO:0035865)
0.4 1.1 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.3 1.0 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.3 2.0 GO:0031116 positive regulation of microtubule polymerization or depolymerization(GO:0031112) positive regulation of microtubule polymerization(GO:0031116)
0.3 2.8 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.3 1.2 GO:0019388 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.3 0.9 GO:0006984 ER-nucleus signaling pathway(GO:0006984)
0.3 1.1 GO:0050878 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.3 2.5 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.3 0.8 GO:0042891 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.3 1.1 GO:0030643 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.3 0.8 GO:0051202 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.3 0.8 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.2 4.0 GO:0006538 glutamate catabolic process(GO:0006538)
0.2 3.1 GO:0048317 seed morphogenesis(GO:0048317)
0.2 0.9 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.2 0.7 GO:0009915 phloem sucrose loading(GO:0009915)
0.2 0.7 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.2 1.1 GO:0090342 regulation of cell aging(GO:0090342)
0.2 0.7 GO:0070537 histone H2A K63-linked deubiquitination(GO:0070537)
0.2 0.7 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.2 0.2 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.2 1.4 GO:2000037 regulation of stomatal complex patterning(GO:2000037)
0.2 1.2 GO:0030656 regulation of vitamin metabolic process(GO:0030656)
0.2 1.2 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.2 0.6 GO:0098532 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.2 0.6 GO:0071569 protein ufmylation(GO:0071569)
0.2 0.4 GO:0010541 acropetal auxin transport(GO:0010541)
0.2 1.1 GO:0006624 vacuolar protein processing(GO:0006624)
0.2 2.3 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.2 0.6 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.2 0.6 GO:0098795 mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795)
0.2 1.1 GO:1903428 positive regulation of reactive oxygen species biosynthetic process(GO:1903428)
0.2 0.9 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.2 1.1 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.2 4.0 GO:0007602 phototransduction(GO:0007602) red, far-red light phototransduction(GO:0009585)
0.2 1.6 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.2 0.5 GO:0019695 choline metabolic process(GO:0019695)
0.2 0.5 GO:0071217 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217)
0.2 1.2 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.2 1.0 GO:1990169 detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169)
0.2 0.8 GO:0019048 deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290) modulation by virus of host morphology or physiology(GO:0019048)
0.2 0.5 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.2 0.6 GO:0071836 nectar secretion(GO:0071836)
0.2 0.5 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.1 0.9 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.1 2.2 GO:0010039 response to iron ion(GO:0010039)
0.1 0.4 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.1 0.7 GO:0008608 attachment of spindle microtubules to kinetochore(GO:0008608)
0.1 3.3 GO:0008360 regulation of cell shape(GO:0008360)
0.1 0.7 GO:0051319 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.1 1.2 GO:0009610 response to symbiotic fungus(GO:0009610)
0.1 1.1 GO:0042182 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.1 1.2 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.1 0.9 GO:0042350 GDP-L-fucose biosynthetic process(GO:0042350) GDP-L-fucose metabolic process(GO:0046368)
0.1 0.4 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.1 0.8 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 2.2 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.1 0.5 GO:0097298 regulation of nucleus size(GO:0097298)
0.1 0.6 GO:0035627 ceramide transport(GO:0035627)
0.1 0.4 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 0.7 GO:0010375 stomatal complex patterning(GO:0010375)
0.1 2.6 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.1 0.5 GO:0015669 gas transport(GO:0015669)
0.1 0.8 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 0.8 GO:0051125 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.1 2.0 GO:0009704 de-etiolation(GO:0009704)
0.1 0.5 GO:0043954 cellular component maintenance(GO:0043954) chromatin maintenance(GO:0070827)
0.1 0.3 GO:0019483 thymine catabolic process(GO:0006210) uracil catabolic process(GO:0006212) beta-alanine metabolic process(GO:0019482) beta-alanine biosynthetic process(GO:0019483) thymine metabolic process(GO:0019859)
0.1 0.6 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.1 0.6 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
0.1 0.6 GO:0071715 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.1 0.3 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.1 0.4 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.1 0.9 GO:0034644 cellular response to UV(GO:0034644)
0.1 0.7 GO:0006013 mannose metabolic process(GO:0006013)
0.1 0.3 GO:0071486 cellular response to high light intensity(GO:0071486)
0.1 0.5 GO:0097036 regulation of plasma membrane sterol distribution(GO:0097036)
0.1 0.7 GO:0032204 regulation of telomere maintenance(GO:0032204)
0.1 0.7 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.1 1.8 GO:0019853 L-ascorbic acid metabolic process(GO:0019852) L-ascorbic acid biosynthetic process(GO:0019853)
0.1 0.7 GO:0043090 amino acid import(GO:0043090)
0.1 1.1 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.1 0.8 GO:0031936 negative regulation of chromatin silencing(GO:0031936)
0.1 0.7 GO:0010155 regulation of proton transport(GO:0010155)
0.1 0.6 GO:0010076 maintenance of floral meristem identity(GO:0010076)
0.1 1.1 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.1 0.7 GO:0009643 photosynthetic acclimation(GO:0009643)
0.1 0.7 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 0.3 GO:1904062 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.1 0.7 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 2.0 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.1 0.5 GO:0080187 floral organ senescence(GO:0080187)
0.1 0.6 GO:0051103 DNA ligation involved in DNA repair(GO:0051103)
0.1 0.4 GO:0007266 Rho protein signal transduction(GO:0007266)
0.1 3.7 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 1.9 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.1 0.2 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.1 0.6 GO:0045487 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 3.8 GO:0072666 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.1 0.5 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.1 0.6 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.1 0.4 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.5 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.1 0.3 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 1.6 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.1 0.7 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 1.2 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.1 0.4 GO:0046621 negative regulation of organ growth(GO:0046621)
0.1 1.1 GO:0048441 petal development(GO:0048441) corolla development(GO:0048465)
0.1 0.1 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.1 0.3 GO:0090308 positive regulation of chromatin silencing(GO:0031937) regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.1 0.4 GO:0043480 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 0.3 GO:0006884 cell volume homeostasis(GO:0006884)
0.1 2.0 GO:0016575 histone deacetylation(GO:0016575)
0.1 0.3 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.1 0.8 GO:0006265 DNA topological change(GO:0006265)
0.1 1.4 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.1 2.1 GO:0051225 spindle assembly(GO:0051225)
0.1 0.4 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.1 0.2 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 0.6 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.1 2.5 GO:0009625 response to insect(GO:0009625)
0.1 2.1 GO:0071370 cellular response to gibberellin stimulus(GO:0071370)
0.1 0.5 GO:1902074 response to salt(GO:1902074)
0.1 0.2 GO:0030100 regulation of endocytosis(GO:0030100)
0.1 0.6 GO:0043966 histone H3 acetylation(GO:0043966)
0.1 0.3 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.1 0.7 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.1 0.7 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 0.2 GO:0010266 response to vitamin B1(GO:0010266)
0.1 0.7 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.1 0.5 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 1.2 GO:0010229 inflorescence development(GO:0010229)
0.1 0.6 GO:0006826 iron ion transport(GO:0006826)
0.1 0.4 GO:0043489 RNA stabilization(GO:0043489)
0.1 0.7 GO:0050777 negative regulation of immune system process(GO:0002683) negative regulation of immune response(GO:0050777)
0.1 1.0 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.1 0.8 GO:0006545 glycine biosynthetic process(GO:0006545)
0.1 0.3 GO:0080009 mRNA methylation(GO:0080009)
0.1 0.1 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.1 0.9 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.1 0.6 GO:0010158 abaxial cell fate specification(GO:0010158)
0.1 3.3 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.7 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.0 0.9 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.4 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.0 0.2 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.0 0.5 GO:0044003 modification by symbiont of host morphology or physiology(GO:0044003)
0.0 0.4 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.0 0.3 GO:0046900 tetrahydrofolylpolyglutamate metabolic process(GO:0046900)
0.0 0.8 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 2.9 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.2 GO:0080168 abscisic acid transport(GO:0080168)
0.0 0.1 GO:0019320 hexose catabolic process(GO:0019320)
0.0 0.5 GO:0071329 cellular response to disaccharide stimulus(GO:0071324) cellular response to sucrose stimulus(GO:0071329)
0.0 0.6 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.9 GO:0043044 ATP-dependent chromatin remodeling(GO:0043044)
0.0 0.2 GO:0034508 centromere complex assembly(GO:0034508)
0.0 0.2 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.0 0.1 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.0 1.1 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.6 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 0.5 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 0.2 GO:0070509 calcium ion import(GO:0070509)
0.0 0.9 GO:0010182 carbohydrate mediated signaling(GO:0009756) sugar mediated signaling pathway(GO:0010182)
0.0 0.2 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.0 1.2 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.0 2.0 GO:0009631 cold acclimation(GO:0009631)
0.0 1.2 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.0 0.3 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 4.3 GO:0048511 circadian rhythm(GO:0007623) rhythmic process(GO:0048511)
0.0 0.4 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.0 0.1 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.0 0.1 GO:0048729 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.0 0.6 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.7 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.0 0.1 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.0 0.4 GO:0010052 guard cell differentiation(GO:0010052)
0.0 0.8 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.0 0.4 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 1.1 GO:0007062 sister chromatid cohesion(GO:0007062)
0.0 0.4 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 1.3 GO:0071805 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.0 0.3 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.0 0.3 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.6 GO:2000377 regulation of reactive oxygen species metabolic process(GO:2000377)
0.0 0.1 GO:0010067 procambium histogenesis(GO:0010067)
0.0 0.5 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.5 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.5 GO:0000266 mitochondrial fission(GO:0000266)
0.0 2.0 GO:0048544 recognition of pollen(GO:0048544)
0.0 1.0 GO:0043622 cortical microtubule organization(GO:0043622)
0.0 1.5 GO:0009749 response to glucose(GO:0009749)
0.0 0.8 GO:0009960 endosperm development(GO:0009960)
0.0 0.3 GO:0050821 protein stabilization(GO:0050821)
0.0 0.6 GO:0051260 protein homooligomerization(GO:0051260)
0.0 0.1 GO:0061085 regulation of histone H3-K27 methylation(GO:0061085) positive regulation of histone H3-K27 methylation(GO:0061087)
0.0 0.3 GO:0007143 female meiotic division(GO:0007143)
0.0 0.3 GO:0008361 regulation of cell size(GO:0008361)
0.0 0.1 GO:0080088 spermidine hydroxycinnamate conjugate biosynthetic process(GO:0080088)
0.0 0.4 GO:0006384 transcription initiation from RNA polymerase III promoter(GO:0006384)
0.0 0.3 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 1.1 GO:0042127 regulation of cell proliferation(GO:0042127)
0.0 0.7 GO:0009958 positive gravitropism(GO:0009958)
0.0 0.1 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.0 0.7 GO:0006284 base-excision repair(GO:0006284)
0.0 0.4 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.0 0.6 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.0 0.6 GO:0045324 late endosome to vacuole transport(GO:0045324)
0.0 0.8 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 0.4 GO:0051017 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.1 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.0 0.1 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.0 0.2 GO:0042177 negative regulation of protein catabolic process(GO:0042177)
0.0 0.4 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 0.2 GO:0070828 heterochromatin organization(GO:0070828)
0.0 0.3 GO:0015850 organic hydroxy compound transport(GO:0015850)
0.0 0.1 GO:0009683 indoleacetic acid metabolic process(GO:0009683)
0.0 0.2 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.6 GO:0016556 mRNA modification(GO:0016556)
0.0 0.1 GO:0010500 transmitting tissue development(GO:0010500)
0.0 0.4 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0 0.5 GO:0010091 trichome branching(GO:0010091)
0.0 0.6 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.0 GO:0045912 negative regulation of cellular carbohydrate metabolic process(GO:0010677) negative regulation of carbohydrate metabolic process(GO:0045912)
0.0 0.5 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.2 GO:0071423 malate transmembrane transport(GO:0071423)
0.0 0.3 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.5 GO:0006305 DNA alkylation(GO:0006305) DNA methylation(GO:0006306)
0.0 0.4 GO:0042631 cellular response to water deprivation(GO:0042631)
0.0 0.1 GO:0000731 DNA synthesis involved in DNA repair(GO:0000731)
0.0 0.1 GO:0019632 shikimate metabolic process(GO:0019632)
0.0 1.2 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.1 GO:0044090 positive regulation of vacuole organization(GO:0044090)
0.0 0.6 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.4 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.5 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.2 GO:0048829 root cap development(GO:0048829)
0.0 0.1 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.0 0.0 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.0 0.0 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.0 0.5 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 1.1 GO:0016579 protein deubiquitination(GO:0016579)
0.0 1.8 GO:0010228 vegetative to reproductive phase transition of meristem(GO:0010228)
0.0 0.6 GO:0007034 vacuolar transport(GO:0007034)
0.0 0.1 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 0.2 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.7 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.1 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 0.4 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.1 GO:0009405 pathogenesis(GO:0009405)
0.0 0.1 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.0 0.3 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 1.0 GO:0018209 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.0 5.4 GO:0016567 protein ubiquitination(GO:0016567)
0.0 0.7 GO:0009561 megagametogenesis(GO:0009561)
0.0 0.2 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.0 1.2 GO:0046777 protein autophosphorylation(GO:0046777)
0.0 0.2 GO:0060968 regulation of gene silencing(GO:0060968)
0.0 0.1 GO:0006625 protein targeting to peroxisome(GO:0006625) protein localization to peroxisome(GO:0072662) establishment of protein localization to peroxisome(GO:0072663)
0.0 0.1 GO:0008283 cell proliferation(GO:0008283)
0.0 0.2 GO:0009682 induced systemic resistance(GO:0009682)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 2.8 GO:0043235 receptor complex(GO:0043235)
0.8 2.4 GO:0043673 lateral plasma membrane(GO:0016328) pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.2 2.2 GO:0016272 prefoldin complex(GO:0016272)
0.2 1.1 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.2 0.5 GO:0060293 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.2 0.5 GO:0005652 nuclear lamina(GO:0005652)
0.2 1.1 GO:0016363 nuclear matrix(GO:0016363)
0.1 1.0 GO:0071006 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.1 1.2 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.1 1.6 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 0.4 GO:0030874 nucleolar chromatin(GO:0030874)
0.1 0.5 GO:0032807 DNA ligase IV complex(GO:0032807)
0.1 1.2 GO:0017119 Golgi transport complex(GO:0017119)
0.1 0.7 GO:0070552 BRISC complex(GO:0070552)
0.1 1.5 GO:0005880 nuclear microtubule(GO:0005880)
0.1 0.6 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.1 1.9 GO:0031012 extracellular matrix(GO:0031012)
0.1 0.4 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.1 2.8 GO:0005881 cytoplasmic microtubule(GO:0005881)
0.1 0.3 GO:0070847 core mediator complex(GO:0070847)
0.1 2.1 GO:0009574 preprophase band(GO:0009574)
0.1 0.3 GO:0034715 pICln-Sm protein complex(GO:0034715)
0.1 0.4 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.8 GO:0031209 SCAR complex(GO:0031209)
0.1 2.0 GO:0000118 histone deacetylase complex(GO:0000118)
0.1 0.5 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.1 0.5 GO:0010369 chromocenter(GO:0010369)
0.1 0.5 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.1 0.5 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.1 0.8 GO:0005720 nuclear heterochromatin(GO:0005720)
0.1 0.3 GO:0035102 PRC1 complex(GO:0035102)
0.1 8.3 GO:0000790 nuclear chromatin(GO:0000790)
0.1 0.7 GO:0072686 mitotic spindle(GO:0072686)
0.1 0.7 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.1 0.4 GO:0070652 HAUS complex(GO:0070652)
0.1 1.5 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.1 0.5 GO:0010445 nuclear dicing body(GO:0010445)
0.1 2.0 GO:0042644 chloroplast nucleoid(GO:0042644)
0.1 0.9 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.1 0.2 GO:0000782 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.1 3.1 GO:0016607 nuclear speck(GO:0016607)
0.0 0.2 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.0 0.3 GO:0017053 transcriptional repressor complex(GO:0017053)
0.0 0.7 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.0 0.4 GO:0009523 photosystem II(GO:0009523)
0.0 0.3 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 0.3 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.0 0.4 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 0.3 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.0 0.2 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.0 0.6 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.6 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.1 GO:0032044 DSIF complex(GO:0032044)
0.0 0.5 GO:0008023 transcription elongation factor complex(GO:0008023)
0.0 0.2 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 1.7 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 0.5 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 0.6 GO:0010319 stromule(GO:0010319)
0.0 1.1 GO:0009524 phragmoplast(GO:0009524)
0.0 7.5 GO:0042651 thylakoid membrane(GO:0042651)
0.0 0.5 GO:0031977 thylakoid lumen(GO:0031977)
0.0 0.3 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.0 0.6 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.3 GO:0000124 SAGA complex(GO:0000124)
0.0 0.8 GO:0036464 ribonucleoprotein granule(GO:0035770) cytoplasmic ribonucleoprotein granule(GO:0036464)
0.0 1.5 GO:0005770 late endosome(GO:0005770)
0.0 0.1 GO:0005845 mRNA cap binding complex(GO:0005845) RNA cap binding complex(GO:0034518)
0.0 0.9 GO:0005875 microtubule associated complex(GO:0005875)
0.0 0.3 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.3 GO:0071010 U2-type prespliceosome(GO:0071004) prespliceosome(GO:0071010)
0.0 0.5 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 1.0 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 1.9 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 1.8 GO:0044217 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 0.4 GO:0030134 ER to Golgi transport vesicle(GO:0030134)
0.0 2.2 GO:0000325 plant-type vacuole(GO:0000325)
0.0 0.1 GO:0000938 GARP complex(GO:0000938)
0.0 0.4 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 0.9 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.2 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 3.1 GO:0005768 endosome(GO:0005768)
0.0 0.5 GO:0019898 extrinsic component of membrane(GO:0019898)
0.0 1.1 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.1 GO:0043230 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 1.7 GO:0099503 secretory vesicle(GO:0099503)
0.0 1.5 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.4 GO:0000785 chromatin(GO:0000785)
0.0 0.1 GO:0045263 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276) proton-transporting ATP synthase complex, coupling factor F(o)(GO:0045263)
0.0 0.2 GO:0031903 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 0.1 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.5 GO:0015087 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.8 3.1 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.5 1.5 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.5 2.4 GO:0080139 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.5 2.9 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.4 1.8 GO:0050162 oxalate oxidase activity(GO:0050162)
0.4 2.5 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.4 3.2 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.4 1.2 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.4 4.0 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.4 1.1 GO:0043325 phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.3 1.4 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.3 1.2 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.3 2.1 GO:0080115 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.3 0.9 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.3 1.1 GO:0000213 tRNA-intron endonuclease activity(GO:0000213)
0.3 0.8 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.2 1.2 GO:0008905 mannose-phosphate guanylyltransferase activity(GO:0008905)
0.2 1.0 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.2 1.5 GO:0016312 inositol bisphosphate phosphatase activity(GO:0016312)
0.2 1.2 GO:0001664 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.2 0.8 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.2 0.6 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.2 1.4 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.2 1.9 GO:0035198 miRNA binding(GO:0035198)
0.2 2.7 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.2 0.9 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.2 0.6 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.2 0.4 GO:0003777 microtubule motor activity(GO:0003777)
0.2 0.5 GO:0070678 preprotein binding(GO:0070678)
0.2 1.1 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.2 0.7 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.2 0.7 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.2 0.5 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.2 1.3 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.2 0.5 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.2 0.8 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.2 2.8 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.2 1.0 GO:0030544 Hsp70 protein binding(GO:0030544)
0.2 1.1 GO:0032977 membrane insertase activity(GO:0032977)
0.2 0.6 GO:0016433 rRNA (adenine) methyltransferase activity(GO:0016433)
0.2 0.9 GO:0070568 guanylyltransferase activity(GO:0070568)
0.2 1.2 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.2 1.2 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.2 1.1 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.2 0.5 GO:0010331 gibberellin binding(GO:0010331)
0.1 0.6 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.1 1.5 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.1 0.6 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.1 0.4 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.1 0.4 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1 0.9 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.1 0.5 GO:0050347 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.1 0.6 GO:0035620 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.1 0.5 GO:0033188 sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
0.1 0.8 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 0.4 GO:0004046 aminoacylase activity(GO:0004046)
0.1 0.7 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.1 0.4 GO:0010521 telomerase inhibitor activity(GO:0010521)
0.1 0.5 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.1 0.8 GO:0051018 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.1 0.8 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.1 0.7 GO:0005034 osmosensor activity(GO:0005034)
0.1 0.7 GO:0004567 beta-mannosidase activity(GO:0004567)
0.1 1.7 GO:0035064 methylated histone binding(GO:0035064)
0.1 1.3 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.1 0.7 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 1.9 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 1.0 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.1 3.4 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.3 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.1 0.4 GO:0004001 adenosine kinase activity(GO:0004001)
0.1 1.2 GO:0019210 kinase inhibitor activity(GO:0019210)
0.1 0.7 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 1.2 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.1 3.4 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.1 0.6 GO:0016411 acylglycerol O-acyltransferase activity(GO:0016411)
0.1 0.4 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.1 0.8 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.1 1.8 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.1 1.1 GO:0004575 sucrose alpha-glucosidase activity(GO:0004575)
0.1 0.3 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.1 4.3 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 10.3 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 1.1 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 0.4 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.1 0.3 GO:0070034 telomerase RNA binding(GO:0070034)
0.1 0.8 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.1 0.5 GO:0004142 diacylglycerol cholinephosphotransferase activity(GO:0004142)
0.1 0.8 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.1 0.5 GO:0008022 protein C-terminus binding(GO:0008022)
0.1 0.8 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 0.8 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.1 0.5 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.1 1.2 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.1 1.0 GO:0030674 protein binding, bridging(GO:0030674)
0.1 0.1 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017) MAP kinase phosphatase activity(GO:0033549)
0.1 0.3 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.1 4.5 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 1.3 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 1.9 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.1 0.3 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.3 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.1 0.2 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 1.6 GO:0004568 chitinase activity(GO:0004568)
0.1 0.3 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 0.5 GO:0051185 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.1 0.6 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.1 0.7 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.1 1.0 GO:0051117 ATPase binding(GO:0051117)
0.1 1.4 GO:0008143 poly(A) binding(GO:0008143)
0.1 0.2 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.1 0.9 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.1 0.3 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
0.1 0.2 GO:0005344 oxygen transporter activity(GO:0005344)
0.1 0.8 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.3 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.4 GO:0002020 protease binding(GO:0002020)
0.1 2.0 GO:0004407 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.1 0.3 GO:0004129 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.1 1.0 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.1 1.1 GO:0008327 methyl-CpG binding(GO:0008327)
0.1 0.6 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 0.8 GO:0004629 phospholipase C activity(GO:0004629)
0.0 0.2 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.0 0.2 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.7 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.0 0.2 GO:0015923 mannosidase activity(GO:0015923)
0.0 1.2 GO:0004693 cyclin-dependent protein serine/threonine kinase activity(GO:0004693) cyclin-dependent protein kinase activity(GO:0097472)
0.0 0.2 GO:0010313 phytochrome binding(GO:0010313)
0.0 0.4 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.0 0.3 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.0 6.5 GO:0008017 microtubule binding(GO:0008017)
0.0 1.0 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.9 GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor(GO:0016641)
0.0 1.8 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.4 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 1.2 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.1 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.0 0.5 GO:0010997 anaphase-promoting complex binding(GO:0010997)
0.0 4.3 GO:0003712 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 0.6 GO:0016775 protein histidine kinase activity(GO:0004673) phosphotransferase activity, nitrogenous group as acceptor(GO:0016775)
0.0 0.2 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.3 GO:0043495 protein anchor(GO:0043495)
0.0 1.7 GO:0042393 histone binding(GO:0042393)
0.0 0.6 GO:0015179 L-amino acid transmembrane transporter activity(GO:0015179)
0.0 2.0 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 0.3 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.3 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 0.6 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.2 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.0 0.7 GO:0004864 protein phosphatase inhibitor activity(GO:0004864) phosphatase inhibitor activity(GO:0019212)
0.0 1.4 GO:0015079 potassium ion transmembrane transporter activity(GO:0015079)
0.0 0.1 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.0 0.5 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 0.7 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.5 GO:0019905 syntaxin binding(GO:0019905)
0.0 0.6 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.0 0.3 GO:0051087 chaperone binding(GO:0051087)
0.0 0.1 GO:0071617 lysophospholipid acyltransferase activity(GO:0071617)
0.0 0.3 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.1 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.0 0.7 GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives(GO:0016857)
0.0 0.1 GO:0004424 imidazoleglycerol-phosphate dehydratase activity(GO:0004424)
0.0 0.1 GO:0004765 shikimate kinase activity(GO:0004765)
0.0 0.2 GO:0016004 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.0 0.5 GO:0008266 poly(U) RNA binding(GO:0008266)
0.0 0.3 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.3 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.0 1.8 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.4 GO:0031418 L-ascorbic acid binding(GO:0031418)
0.0 1.2 GO:0009931 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.4 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.0 0.2 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 0.4 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.2 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.0 0.3 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.4 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.5 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 2.9 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.0 0.1 GO:0016247 ion channel inhibitor activity(GO:0008200) channel regulator activity(GO:0016247) channel inhibitor activity(GO:0016248) sodium channel regulator activity(GO:0017080) sodium channel inhibitor activity(GO:0019871)
0.0 0.2 GO:0016722 oxidoreductase activity, oxidizing metal ions(GO:0016722)
0.0 0.2 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.0 1.0 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.2 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.0 0.6 GO:0016597 amino acid binding(GO:0016597)
0.0 0.1 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 1.8 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 1.1 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.0 0.2 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.0 2.2 GO:0005516 calmodulin binding(GO:0005516)
0.0 0.6 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 1.0 GO:0008170 N-methyltransferase activity(GO:0008170)
0.0 0.6 GO:0001871 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.7 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 0.1 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.3 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.0 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.0 1.0 GO:0051082 unfolded protein binding(GO:0051082)
0.0 4.0 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 0.2 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.2 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.3 GO:0032934 sterol binding(GO:0032934)
0.0 0.5 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 2.0 GO:0019787 ubiquitin-like protein transferase activity(GO:0019787)
0.0 0.2 GO:0051536 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.0 5.1 GO:0000975 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)
0.0 0.1 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.2 PID PDGFRA PATHWAY PDGFR-alpha signaling pathway
0.2 0.9 ST INTEGRIN SIGNALING PATHWAY Integrin Signaling Pathway
0.2 0.8 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.2 1.4 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.4 PID DELTA NP63 PATHWAY Validated transcriptional targets of deltaNp63 isoforms
0.1 0.6 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.2 PID IL4 2PATHWAY IL4-mediated signaling events
0.1 0.2 PID VEGFR1 2 PATHWAY Signaling events mediated by VEGFR1 and VEGFR2

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.3 4.0 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.4 1.2 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.3 0.8 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.2 0.6 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 0.4 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.2 0.6 REACTOME SIGNAL ATTENUATION Genes involved in Signal attenuation
0.1 0.7 REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT Genes involved in SLC-mediated transmembrane transport
0.1 0.4 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.1 0.4 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.1 0.3 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.1 0.5 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
0.1 0.2 REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE Genes involved in Synthesis of PIPs at the Golgi membrane
0.0 0.1 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.0 0.2 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.0 0.1 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 0.3 REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex