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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G21230

Z-value: 0.23

Transcription factors associated with AT2G21230

Gene Symbol Gene ID Gene Info
AT2G21230
AT2G21230 Basic-leucine zipper (bZIP) transcription factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT2G21230arTal_v1_Chr2_-_9096347_9096414-0.039.1e-01Click!

Activity profile of AT2G21230 motif

Sorted Z-values of AT2G21230 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_+_24167996_24168072 0.23 AT5G60020.1
AT5G60020.2
LAC17
laccase 17
arTal_v1_Chr5_-_5741500_5741500 0.23 AT5G17420.1
IRX3
Cellulose synthase family protein
arTal_v1_Chr2_-_15589369_15589369 0.22 AT2G37090.1
IRX9
Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr4_-_16063070_16063251 0.18 AT4G33330.2
AT4G33330.1
AT4G33330.5
AT4G33330.3
AT4G33330.4
PGSIP3
plant glycogenin-like starch initiation protein 3
arTal_v1_Chr5_+_24168245_24168245 0.17 AT5G60020.3
LAC17
laccase 17
arTal_v1_Chr5_+_17714390_17714390 0.13 AT5G44030.2
AT5G44030.1
CESA4
cellulose synthase A4
arTal_v1_Chr1_-_9510263_9510269 0.08 AT1G27380.1
AT1G27380.3
AT1G27380.4
RIC2
ROP-interactive CRIB motif-containing protein 2
arTal_v1_Chr5_+_17715687_17715687 0.07 AT5G44030.3
CESA4
cellulose synthase A4
arTal_v1_Chr3_-_8217080_8217206 0.04 AT3G23090.1
AT3G23090.2
AT3G23090.4
AT3G23090.3
AT3G23090
TPX2 (targeting protein for Xklp2) protein family
arTal_v1_Chr4_+_14034536_14034614 0.03 AT4G28370.3
AT4G28370.2
AT4G28370.1
AT4G28370.4
AT4G28370
RING/U-box superfamily protein
arTal_v1_Chr3_-_8216305_8216305 0.01 AT3G23090.5
AT3G23090
TPX2 (targeting protein for Xklp2) protein family
arTal_v1_Chr1_-_9510066_9510066 0.01 AT1G27380.2
RIC2
ROP-interactive CRIB motif-containing protein 2
arTal_v1_Chr1_+_6177481_6177481 0.01 AT1G17950.1
MYB52
myb domain protein 52

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G21230

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.0 0.4 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0010330 cellulose synthase complex(GO:0010330)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.2 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)
0.0 0.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.4 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)