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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G44730

Z-value: 0.43

Transcription factors associated with AT2G44730

Gene Symbol Gene ID Gene Info
AT2G44730
AT2G44730 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT2G44730arTal_v1_Chr2_-_18438565_18438565-0.117.1e-01Click!

Activity profile of AT2G44730 motif

Sorted Z-values of AT2G44730 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr4_+_13283526_13283526 0.53 AT4G26220.1
AT4G26220
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr5_-_5741500_5741500 0.48 AT5G17420.1
IRX3
Cellulose synthase family protein
arTal_v1_Chr5_+_24167996_24168072 0.43 AT5G60020.1
AT5G60020.2
LAC17
laccase 17
arTal_v1_Chr4_+_16310768_16310815 0.41 AT4G34050.1
AT4G34050.2
CCoAOMT1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr4_+_16310409_16310409 0.39 AT4G34050.3
CCoAOMT1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr2_-_15589369_15589369 0.38 AT2G37090.1
IRX9
Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr4_+_13723610_13723610 0.36 AT4G27435.1
AT4G27435
fiber (DUF1218)
arTal_v1_Chr4_-_16063070_16063251 0.35 AT4G33330.2
AT4G33330.1
AT4G33330.5
AT4G33330.3
AT4G33330.4
PGSIP3
plant glycogenin-like starch initiation protein 3
arTal_v1_Chr5_+_5084524_5084695 0.31 AT5G15630.1
AT5G15630.2
AT5G15630.3
AT5G15630.4
AT5G15630.5
IRX6
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
arTal_v1_Chr2_-_17060652_17060652 0.30 AT2G40890.1
CYP98A3
cytochrome P450, family 98, subfamily A, polypeptide 3
arTal_v1_Chr5_+_24168245_24168245 0.30 AT5G60020.3
LAC17
laccase 17
arTal_v1_Chr2_-_12996012_12996012 0.27 AT2G30490.1
C4H
cinnamate-4-hydroxylase
arTal_v1_Chr1_-_9531489_9531489 0.24 AT1G27440.1
GUT2
Exostosin family protein
arTal_v1_Chr5_+_17714390_17714390 0.24 AT5G44030.2
AT5G44030.1
CESA4
cellulose synthase A4
arTal_v1_Chr5_+_17715687_17715687 0.14 AT5G44030.3
CESA4
cellulose synthase A4
arTal_v1_Chr5_-_24422274_24422274 0.10 AT5G60720.1
AT5G60720
electron transporter, putative (Protein of unknown function, DUF547)
arTal_v1_Chr5_+_25050679_25050679 0.09 AT5G62380.2
NAC101
NAC-domain protein 101
arTal_v1_Chr5_+_25050152_25050152 0.08 AT5G62380.1
NAC101
NAC-domain protein 101
arTal_v1_Chr3_+_6744377_6744377 0.06 AT3G19450.1
ATCAD4
GroES-like zinc-binding alcohol dehydrogenase family protein
arTal_v1_Chr1_+_17634697_17634757 0.06 AT1G47870.1
AT1G47870.2
ATE2F2
winged-helix DNA-binding transcription factor family protein
arTal_v1_Chr3_-_2578276_2578276 0.03 AT3G08500.1
MYB83
myb domain protein 83

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G44730

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.1 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 0.5 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 0.8 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.2 GO:0090058 metaxylem development(GO:0090058)
0.0 0.3 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.0 0.1 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.0 0.4 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.3 GO:0006744 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0010330 cellulose synthase complex(GO:0010330)
0.0 0.2 GO:0009531 secondary cell wall(GO:0009531)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.2 0.4 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.2 0.6 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.1 0.3 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.0 0.7 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.9 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)