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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G45420

Z-value: 0.67

Transcription factors associated with AT2G45420

Gene Symbol Gene ID Gene Info
AT2G45420
AT2G45420 LOB domain-containing protein 18

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
LBD18arTal_v1_Chr2_+_18718348_187183480.283.4e-01Click!

Activity profile of AT2G45420 motif

Sorted Z-values of AT2G45420 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr2_-_17712290_17712330 1.29 AT2G42540.2
AT2G42540.4
AT2G42540.1
AT2G42540.3
COR15A
cold-regulated 15a
arTal_v1_Chr5_+_21240717_21240717 1.05 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
arTal_v1_Chr3_+_4104463_4104463 0.75 AT3G12900.1
AT3G12900
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr5_-_5692920_5692992 0.64 AT5G17300.2
AT5G17300.1
RVE1
Homeodomain-like superfamily protein
arTal_v1_Chr1_+_23953099_23953099 0.57 AT1G64500.1
AT1G64500
Glutaredoxin family protein
arTal_v1_Chr5_+_20151163_20151163 0.56 AT5G49640.1
AT5G49640
hypothetical protein
arTal_v1_Chr4_+_8827600_8827710 0.55 AT4G15430.2
AT4G15430.1
AT4G15430
ERD (early-responsive to dehydration stress) family protein
arTal_v1_Chr3_-_17475274_17475274 0.52 AT3G47420.3
AT3G47420.1
AT3G47420.2
G3Pp1
putative glycerol-3-phosphate transporter 1
arTal_v1_Chr5_-_6976036_6976036 0.51 AT5G20630.1
GER3
germin 3
arTal_v1_Chr2_-_9266393_9266393 0.49 AT2G21660.2
GRP7
cold, circadian rhythm, and rna binding 2
arTal_v1_Chr2_-_9266557_9266557 0.49 AT2G21660.1
GRP7
cold, circadian rhythm, and rna binding 2
arTal_v1_Chr1_-_30142697_30142697 0.47 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_+_3595694_3595694 0.47 AT3G11430.1
GPAT5
glycerol-3-phosphate acyltransferase 5
arTal_v1_Chr2_-_18082776_18082776 0.46 AT2G43590.1
AT2G43590
Chitinase family protein
arTal_v1_Chr4_+_8646150_8646150 0.46 AT4G15160.2
AT4G15160.1
AT4G15160
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr2_+_15106940_15106940 0.45 AT2G35960.1
NHL12
NDR1/HIN1-like 12
arTal_v1_Chr2_-_7153430_7153430 0.44 AT2G16500.1
ADC1
arginine decarboxylase 1
arTal_v1_Chr4_-_13001948_13001948 0.43 AT4G25433.1
AT4G25433
peptidoglycan-binding LysM domain-containing protein
arTal_v1_Chr4_-_18472048_18472048 0.43 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
arTal_v1_Chr4_+_10707344_10707378 0.42 AT4G19690.2
AT4G19690.1
IRT1
iron-regulated transporter 1
arTal_v1_Chr4_+_12649985_12649987 0.42 AT4G24480.2
AT4G24480.1
AT4G24480.3
AT4G24480
Protein kinase superfamily protein
arTal_v1_Chr3_+_5025383_5025383 0.41 AT3G14940.2
PPC3
phosphoenolpyruvate carboxylase 3
arTal_v1_Chr3_+_5025184_5025184 0.41 AT3G14940.1
PPC3
phosphoenolpyruvate carboxylase 3
arTal_v1_Chr3_-_2569700_2569700 0.40 AT3G08040.2
AT3G08040.1
FRD3
MATE efflux family protein
arTal_v1_Chr5_-_23117403_23117686 0.40 AT5G57110.3
AT5G57110.1
AT5G57110.2
ACA8
autoinhibited Ca2+ -ATPase, isoform 8
arTal_v1_Chr4_-_810574_810611 0.38 AT4G01870.1
AT4G01870.2
AT4G01870
tolB protein-like protein
arTal_v1_Chr5_-_17755742_17755768 0.38 AT5G44110.2
AT5G44110.4
AT5G44110.3
AT5G44110.1
ABCI21
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr5_-_2958971_2958971 0.38 AT5G09520.1
PELPK2
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr5_-_19291103_19291103 0.37 AT5G47560.1
TDT
tonoplast dicarboxylate transporter
arTal_v1_Chr5_+_22388521_22388521 0.37 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr1_+_23168767_23168767 0.37 AT1G62570.1
FMO GS-OX4
flavin-monooxygenase glucosinolate S-oxygenase 4
arTal_v1_Chr5_+_22388782_22388782 0.36 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr5_-_4526068_4526167 0.35 AT5G14020.7
AT5G14020.6
AT5G14020.4
AT5G14020.1
AT5G14020.2
AT5G14020.5
AT5G14020.3
AT5G14020
Endosomal targeting BRO1-like domain-containing protein
arTal_v1_Chr1_+_27538190_27538190 0.35 AT1G73220.1
OCT1
organic cation/carnitine transporter1
arTal_v1_Chr1_-_9890875_9891015 0.35 AT1G28290.2
AT1G28290.1
AGP31
arabinogalactan protein 31
arTal_v1_Chr2_+_1993038_1993084 0.35 AT2G05440.2
AT2G05440.9
AT2G05440.5
AT2G05440.1
AT2G05440.6
AT2G05440.3
AT2G05440.4
AT2G05440.8
AT2G05440.7
GRP9
GLYCINE RICH PROTEIN 9
arTal_v1_Chr5_-_2961382_2961382 0.34 AT5G09530.1
PELPK1
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr2_-_14489767_14489767 0.34 AT2G34340.1
AT2G34340
senescence regulator (Protein of unknown function, DUF584)
arTal_v1_Chr3_-_845096_845096 0.33 AT3G03530.1
NPC4
non-specific phospholipase C4
arTal_v1_Chr4_+_13675537_13675537 0.33 AT4G27310.1
BBX28
B-box type zinc finger family protein
arTal_v1_Chr4_+_5244865_5244865 0.33 AT4G08300.1
UMAMIT17
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr3_-_1652149_1652149 0.32 AT3G05660.1
RLP33
receptor like protein 33
arTal_v1_Chr5_+_16161449_16161449 0.32 AT5G40390.1
SIP1
Raffinose synthase family protein
arTal_v1_Chr2_+_14155853_14155853 0.31 AT2G33410.1
AT2G33410
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr4_-_13752103_13752103 0.31 AT4G27520.1
ENODL2
early nodulin-like protein 2
arTal_v1_Chr5_+_5594632_5594724 0.31 AT5G17020.1
AT5G17020.2
XPO1A
exportin 1A
arTal_v1_Chr5_-_23301689_23301689 0.31 AT5G57530.1
XTH12
xyloglucan endotransglucosylase/hydrolase 12
arTal_v1_Chr4_+_17882644_17882644 0.31 AT4G38080.1
AT4G38080
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr1_-_29537417_29537482 0.31 AT1G78510.2
AT1G78510.1
SPS1
solanesyl diphosphate synthase 1
arTal_v1_Chr5_-_5609589_5609589 0.31 AT5G17050.1
UGT78D2
UDP-glucosyl transferase 78D2
arTal_v1_Chr1_+_16847684_16847684 0.31 AT1G44414.1
AT1G44414
zinc-ribbon domain protein
arTal_v1_Chr3_-_4834015_4834015 0.30 AT3G14440.1
NCED3
nine-cis-epoxycarotenoid dioxygenase 3
arTal_v1_Chr2_-_15955752_15955752 0.30 AT2G38110.1
GPAT6
glycerol-3-phosphate acyltransferase 6
arTal_v1_Chr1_+_25016402_25016402 0.30 AT1G67030.1
ZFP6
zinc finger protein 6
arTal_v1_Chr1_+_15976805_15976805 0.30 AT1G42550.1
PMI1
plastid movement impaired1
arTal_v1_Chr4_-_13709013_13709013 0.30 AT4G27410.3
RD26
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
arTal_v1_Chr2_+_9592956_9592956 0.30 AT2G22590.1
AT2G22590
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr4_+_11182092_11182092 0.30 AT4G20890.1
TUB9
tubulin beta-9 chain
arTal_v1_Chr3_-_4974521_4974534 0.29 AT3G14810.1
AT3G14810.2
MSL5
mechanosensitive channel of small conductance-like 5
arTal_v1_Chr3_+_5705541_5705541 0.29 AT3G16770.1
EBP
ethylene-responsive element binding protein
arTal_v1_Chr1_-_30186716_30186716 0.29 AT1G80280.1
AT1G80280
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_-_13709170_13709170 0.29 AT4G27410.2
RD26
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
arTal_v1_Chr1_-_22363854_22363854 0.29 AT1G60750.1
AT1G60750
NAD(P)-linked oxidoreductase superfamily protein
arTal_v1_Chr3_-_19821505_19821519 0.29 AT3G53460.1
AT3G53460.2
AT3G53460.3
AT3G53460.4
CP29
chloroplast RNA-binding protein 29
arTal_v1_Chr5_+_6690520_6690520 0.28 AT5G19800.1
AT5G19800
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr1_-_156011_156011 0.28 AT1G01420.1
UGT72B3
UDP-glucosyl transferase 72B3
arTal_v1_Chr3_+_7275645_7275706 0.28 AT3G20810.1
AT3G20810.4
AT3G20810.2
AT3G20810.5
AT3G20810.3
JMJD5
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr4_-_13708861_13708861 0.28 AT4G27410.1
RD26
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
arTal_v1_Chr4_-_9680389_9680389 0.28 AT4G17280.1
AT4G17280
Auxin-responsive family protein
arTal_v1_Chr5_+_8082650_8082744 0.28 AT5G23950.2
AT5G23950.1
AT5G23950
Calcium-dependent lipid-binding (CaLB domain) family protein
arTal_v1_Chr1_-_156178_156178 0.28 AT1G01420.2
UGT72B3
UDP-glucosyl transferase 72B3
arTal_v1_Chr2_+_9248525_9248573 0.28 AT2G21620.1
AT2G21620.2
RD2
Adenine nucleotide alpha hydrolases-like superfamily protein
arTal_v1_Chr1_-_25885261_25885261 0.28 AT1G68850.1
AT1G68850
Peroxidase superfamily protein
arTal_v1_Chr4_-_9844290_9844334 0.27 AT4G17680.3
AT4G17680.2
AT4G17680.1
AT4G17680
SBP (S-ribonuclease binding protein) family protein
arTal_v1_Chr4_-_17267472_17267472 0.27 AT4G36610.1
AT4G36610
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_+_993400_993400 0.27 AT1G03905.4
AT1G03905.2
AT1G03905.1
AT1G03905.3
ABCI19
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr3_-_19747114_19747114 0.27 AT3G53260.1
PAL2
phenylalanine ammonia-lyase 2
arTal_v1_Chr5_-_4697078_4697078 0.27 AT5G14570.1
NRT2.7
high affinity nitrate transporter 2.7
arTal_v1_Chr1_+_1425539_1425539 0.27 AT1G05000.3
AT1G05000.1
AT1G05000.2
PFA-DSP1
Phosphotyrosine protein phosphatases superfamily protein
arTal_v1_Chr3_+_484256_484287 0.27 AT3G02370.1
AT3G02370.4
AT3G02370.2
AT3G02370.3
AT3G02370
tRNA-splicing endonuclease subunit
arTal_v1_Chr4_+_32748_32748 0.27 AT4G00080.1
UNE11
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr2_-_19638678_19638678 0.27 AT2G47990.1
SWA1
transducin family protein / WD-40 repeat family protein
arTal_v1_Chr5_+_20644525_20644525 0.27 AT5G50760.1
AT5G50760
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_+_28174187_28174187 0.27 AT1G75030.1
TLP-3
thaumatin-like protein 3
arTal_v1_Chr2_-_19667192_19667192 0.27 AT2G48080.1
AT2G48080
oxidoreductase, 2OG-Fe(II) oxygenase family protein
arTal_v1_Chr1_-_26930347_26930347 0.26 AT1G71460.1
AT1G71460
Pentatricopeptide repeat (PPR-like) superfamily protein
arTal_v1_Chr5_-_2951701_2951701 0.26 AT5G09480.1
AT5G09480
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr5_+_871204_871204 0.26 AT5G03490.1
AT5G03490
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr4_-_857020_857020 0.26 AT4G01970.1
STS
stachyose synthase
arTal_v1_Chr3_+_1086516_1086516 0.26 AT3G04140.1
AT3G04140
Ankyrin repeat family protein
arTal_v1_Chr1_-_6555610_6555610 0.26 AT1G18970.1
GLP4
germin-like protein 4
arTal_v1_Chr4_+_16091535_16091535 0.26 AT4G33440.1
AT4G33440
Pectin lyase-like superfamily protein
arTal_v1_Chr1_-_3029549_3029549 0.26 AT1G09380.1
UMAMIT25
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr1_+_8139114_8139145 0.26 AT1G22990.1
AT1G22990.2
HIPP22
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr1_-_27340044_27340044 0.26 AT1G72610.1
GER1
germin-like protein 1
arTal_v1_Chr3_-_21097481_21097481 0.25 AT3G57010.1
AT3G57010
Calcium-dependent phosphotriesterase superfamily protein
arTal_v1_Chr4_-_857401_857401 0.25 AT4G01970.2
STS
stachyose synthase
arTal_v1_Chr5_+_22808641_22808641 0.25 AT5G56320.2
AT5G56320.1
AT5G56320.3
EXPA14
expansin A14
arTal_v1_Chr3_+_1727151_1727151 0.25 AT3G05800.1
AIF1
AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1
arTal_v1_Chr1_+_18346958_18346958 0.25 AT1G49570.1
AT1G49570
Peroxidase superfamily protein
arTal_v1_Chr4_+_8839256_8839387 0.25 AT4G15450.1
AT4G15450.2
AT4G15450
Senescence/dehydration-associated protein-like protein
arTal_v1_Chr4_-_13022996_13022996 0.25 AT4G25490.1
CBF1
C-repeat/DRE binding factor 1
arTal_v1_Chr5_-_25322265_25322284 0.25 AT5G63120.4
AT5G63120.1
AT5G63120.2
AT5G63120.3
AT5G63120.5
AT5G63120
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr4_+_12527675_12527675 0.25 AT4G24130.1
AT4G24130
DUF538 family protein (Protein of unknown function, DUF538)
arTal_v1_Chr4_-_14542565_14542565 0.24 AT4G29690.1
AT4G29690
Alkaline-phosphatase-like family protein
arTal_v1_Chr5_+_24748023_24748250 0.24 AT5G61550.1
AT5G61550.3
AT5G61550.2
AT5G61550.4
AT5G61550
U-box domain-containing protein kinase family protein
arTal_v1_Chr2_-_16690182_16690182 0.24 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_+_24674963_24674963 0.24 AT5G61380.1
TOC1
CCT motif -containing response regulator protein
arTal_v1_Chr3_-_10011712_10011807 0.24 AT3G27150.2
AT3G27150.1
AT3G27150
Galactose oxidase/kelch repeat superfamily protein
arTal_v1_Chr4_-_11702785_11702785 0.24 AT4G22080.1
RHS14
root hair specific 14
arTal_v1_Chr1_-_29034822_29034822 0.23 AT1G77280.2
AT1G77280.1
AT1G77280
kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
arTal_v1_Chr4_+_14307195_14307195 0.23 AT4G29030.1
AT4G29030
Putative membrane lipoprotein
arTal_v1_Chr4_-_16344818_16344818 0.23 AT4G34131.1
UGT73B3
UDP-glucosyl transferase 73B3
arTal_v1_Chr2_+_16257157_16257157 0.23 AT2G38940.1
PHT1%3B4
phosphate transporter 1;4
arTal_v1_Chr3_+_21701520_21701520 0.23 AT3G58660.1
AT3G58660
Ribosomal protein L1p/L10e family
arTal_v1_Chr2_-_19207608_19207608 0.23 AT2G46740.1
GulLO5
D-arabinono-1,4-lactone oxidase family protein
arTal_v1_Chr5_+_2563366_2563366 0.23 AT5G08000.1
AT5G08000.2
E13L3
glucan endo-1,3-beta-glucosidase-like protein 3
arTal_v1_Chr1_+_26608600_26608625 0.23 AT1G70570.1
AT1G70570.2
AT1G70570
anthranilate phosphoribosyltransferase
arTal_v1_Chr3_-_21645486_21645548 0.23 AT3G58520.2
AT3G58520.1
AT3G58520
Ubiquitin carboxyl-terminal hydrolase family protein
arTal_v1_Chr1_-_10249704_10249704 0.23 AT1G29300.1
UNE1
intracellular protein transporter, putative (DUF641)
arTal_v1_Chr2_-_8235440_8235440 0.23 AT2G18980.1
AT2G18980
Peroxidase superfamily protein
arTal_v1_Chr4_-_8016582_8016582 0.23 AT4G13840.1
AT4G13840
HXXXD-type acyl-transferase family protein
arTal_v1_Chr4_-_16576753_16576753 0.22 AT4G34740.1
ASE2
GLN phosphoribosyl pyrophosphate amidotransferase 2
arTal_v1_Chr4_-_14889855_14889855 0.22 AT4G30460.1
AT4G30460
glycine-rich protein
arTal_v1_Chr3_+_5047376_5047400 0.22 AT3G14990.1
AT3G14990.3
DJ1A
Class I glutamine amidotransferase-like superfamily protein
arTal_v1_Chr4_-_2745635_2745635 0.22 AT4G05410.1
YAO
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr3_+_5047589_5047589 0.22 AT3G14990.2
DJ1A
Class I glutamine amidotransferase-like superfamily protein
arTal_v1_Chr4_-_15934762_15934762 0.22 AT4G33020.2
ZIP9
ZIP metal ion transporter family
arTal_v1_Chr1_+_846664_846664 0.22 AT1G03420.1
Sadhu4-2

arTal_v1_Chr2_+_17367492_17367492 0.22 AT2G41660.1
MIZ1
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
arTal_v1_Chr3_-_21100459_21100519 0.22 AT3G57020.2
AT3G57020.1
AT3G57020
Calcium-dependent phosphotriesterase superfamily protein
arTal_v1_Chr5_-_7255944_7256156 0.22 AT5G21950.7
AT5G21950.2
AT5G21950.3
AT5G21950.1
AT5G21950.4
AT5G21950.6
AT5G21950.5
AT5G21950
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_-_29715017_29715017 0.22 AT1G78990.1
AT1G78990
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_+_5306740_5306740 0.22 AT5G16240.1
AT5G16240
Plant stearoyl-acyl-carrier-protein desaturase family protein
arTal_v1_Chr3_-_7704958_7704958 0.22 AT3G21870.1
CYCP2%3B1
cyclin p2;1
arTal_v1_Chr5_-_7265851_7265874 0.22 AT5G21280.2
AT5G21280.1
AT5G21280
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr4_-_1112033_1112033 0.22 AT4G02520.1
GSTF2
glutathione S-transferase PHI 2
arTal_v1_Chr1_-_7310250_7310271 0.22 AT1G20960.2
AT1G20960.1
emb1507
U5 small nuclear ribonucleoprotein helicase
arTal_v1_Chr2_-_18744322_18744322 0.22 AT2G45470.1
FLA8
FASCICLIN-like arabinogalactan protein 8
arTal_v1_Chr5_-_20762461_20762461 0.21 AT5G51060.1
RHD2
NADPH/respiratory burst oxidase protein D
arTal_v1_Chr2_-_8192536_8192536 0.21 AT2G18900.1
AT2G18900
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr2_-_19287590_19287590 0.21 AT2G46940.1
AT2G46940
fold protein
arTal_v1_Chr5_-_24335858_24335858 0.21 AT5G60530.1
AT5G60530
late embryogenesis abundant protein-related / LEA protein-like protein
arTal_v1_Chr4_+_16130593_16130669 0.21 AT4G33540.1
AT4G33540.2
AT4G33540
metallo-beta-lactamase family protein
arTal_v1_Chr2_+_18537177_18537177 0.21 AT2G44940.1
AT2G44940
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_-_11595982_11596056 0.21 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_+_21073330_21073421 0.21 AT3G56930.1
AT3G56930.2
AT3G56930
DHHC-type zinc finger family protein
arTal_v1_Chr2_+_1935540_1935540 0.21 AT2G05320.1
AT2G05320
beta-1,2-N-acetylglucosaminyltransferase II
arTal_v1_Chr4_+_700566_700566 0.21 AT4G01630.1
EXPA17
expansin A17
arTal_v1_Chr2_+_10024150_10024150 0.21 AT2G23540.1
AT2G23540
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr1_+_954290_954290 0.20 AT1G03790.1
SOM
Zinc finger C-x8-C-x5-C-x3-H type family protein
arTal_v1_Chr5_+_23701392_23701392 0.20 AT5G58660.1
AT5G58660.2
AT5G58660
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr1_+_29220349_29220349 0.20 AT1G77740.1
PIP5K2
phosphatidylinositol-4-phosphate 5-kinase 2
arTal_v1_Chr3_-_4330218_4330218 0.20 AT3G13330.1
PA200
proteasome activating protein 200
arTal_v1_Chr1_+_26742940_26742940 0.20 AT1G70940.1
PIN3
Auxin efflux carrier family protein
arTal_v1_Chr1_+_11993298_11993298 0.20 AT1G33090.1
AT1G33090
MATE efflux family protein
arTal_v1_Chr2_+_17177539_17177539 0.20 AT2G41220.1
GLU2
glutamate synthase 2
arTal_v1_Chr2_+_13722362_13722427 0.20 AT2G32300.2
AT2G32300.1
UCC1
uclacyanin 1
arTal_v1_Chr4_+_13116028_13116028 0.20 AT4G25760.1
GDU2
glutamine dumper 2
arTal_v1_Chr2_-_10850797_10850797 0.20 AT2G25490.1
EBF1
EIN3-binding F box protein 1
arTal_v1_Chr5_+_25328119_25328119 0.20 AT5G63140.1
PAP29
purple acid phosphatase 29
arTal_v1_Chr3_+_3352077_3352077 0.20 AT3G10710.1
RHS12
root hair specific 12
arTal_v1_Chr1_+_11181504_11181504 0.20 AT1G31280.1
AGO2
Argonaute family protein
arTal_v1_Chr4_-_10291058_10291058 0.20 AT4G18700.1
CIPK12
CBL-interacting protein kinase 12
arTal_v1_Chr3_+_17268700_17268700 0.20 AT3G46900.1
COPT2
copper transporter 2
arTal_v1_Chr3_-_23375338_23375405 0.19 AT3G63260.2
AT3G63260.1
ATMRK1
Protein kinase superfamily protein
arTal_v1_Chr1_+_29220538_29220538 0.19 AT1G77740.2
PIP5K2
phosphatidylinositol-4-phosphate 5-kinase 2
arTal_v1_Chr5_+_21030943_21030943 0.19 AT5G51770.1
AT5G51770
Protein kinase superfamily protein
arTal_v1_Chr5_+_7946285_7946285 0.19 AT5G23575.1
AT5G23575
Transmembrane CLPTM1 family protein
arTal_v1_Chr5_-_8987898_8987898 0.19 AT5G25810.1
tny
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_-_6754073_6754073 0.19 AT1G19490.1
AT1G19490
Basic-leucine zipper (bZIP) transcription factor family protein
arTal_v1_Chr1_-_30202349_30202349 0.19 AT1G80340.1
GA3OX2
gibberellin 3-oxidase 2
arTal_v1_Chr1_+_3999157_3999202 0.19 AT1G11850.2
AT1G11850.4
AT1G11850.3
AT1G11850.1
AT1G11850
transmembrane protein
arTal_v1_Chr1_-_2563706_2563706 0.19 AT1G08170.1
AT1G08170
Histone superfamily protein
arTal_v1_Chr3_+_17651841_17651841 0.19 AT3G47840.1
AT3G47840
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr4_+_16131373_16131373 0.19 AT4G33540.3
AT4G33540
metallo-beta-lactamase family protein
arTal_v1_Chr2_+_13277710_13277710 0.19 AT2G31160.1
LSH3
LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)
arTal_v1_Chr2_+_77888_77888 0.19 AT2G01080.1
AT2G01080
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr2_-_18620451_18620451 0.19 AT2G45160.1
HAM1
GRAS family transcription factor
arTal_v1_Chr4_-_18098633_18098633 0.19 AT4G38770.1
PRP4
proline-rich protein 4
arTal_v1_Chr5_+_26416126_26416126 0.19 AT5G66052.1
AT5G66052
transmembrane protein
arTal_v1_Chr4_+_9965742_9965742 0.19 AT4G17940.1
AT4G17940
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_-_4328546_4328616 0.19 AT1G12710.2
AT1G12710.1
PP2-A12
phloem protein 2-A12
arTal_v1_Chr3_+_270221_270229 0.19 AT3G01750.1
AT3G01750.2
AT3G01750
Ankyrin repeat family protein
arTal_v1_Chr1_-_1659611_1659611 0.19 AT1G05570.1
CALS1
callose synthase 1
arTal_v1_Chr5_-_1558486_1558486 0.18 AT5G05250.1
AT5G05250
hypothetical protein
arTal_v1_Chr2_+_7674319_7674351 0.18 AT2G17670.1
AT2G17670.2
AT2G17670
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_+_26423874_26423874 0.18 AT1G70170.1
MMP
matrix metalloproteinase
arTal_v1_Chr1_-_1659437_1659437 0.18 AT1G05570.2
CALS1
callose synthase 1
arTal_v1_Chr3_+_22757761_22757761 0.18 AT3G61490.1
AT3G61490.4
AT3G61490.2
AT3G61490
Pectin lyase-like superfamily protein
arTal_v1_Chr3_+_5518211_5518331 0.18 AT3G16280.2
AT3G16280.1
AT3G16280
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_-_3272110_3272110 0.18 AT1G10020.1
AT1G10020
formin-like protein (DUF1005)
arTal_v1_Chr3_-_4075643_4075643 0.18 AT3G12820.1
MYB10
myb domain protein 10
arTal_v1_Chr1_-_1659079_1659079 0.18 AT1G05570.3
CALS1
callose synthase 1
arTal_v1_Chr5_+_23096024_23096024 0.18 AT5G57070.1
AT5G57070
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr1_-_28603932_28603932 0.18 AT1G76240.1
AT1G76240
DUF241 domain protein (DUF241)
arTal_v1_Chr5_+_24480291_24480291 0.18 AT5G60850.1
OBP4
OBF binding protein 4
arTal_v1_Chr4_-_14776247_14776247 0.18 AT4G30190.1
HA2
H[+]-ATPase 2
arTal_v1_Chr5_+_8354637_8354637 0.18 AT5G24460.1
AT5G24460
RING-H2 zinc finger protein
arTal_v1_Chr5_+_23087122_23087153 0.18 AT5G57050.1
AT5G57050.3
AT5G57050.2
ABI2
Protein phosphatase 2C family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G45420

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0019594 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.2 1.4 GO:0009819 drought recovery(GO:0009819)
0.1 0.6 GO:0006527 arginine catabolic process(GO:0006527)
0.1 0.4 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.1 0.4 GO:1990532 stress response to nickel ion(GO:1990532)
0.1 0.4 GO:0015696 ammonium transport(GO:0015696)
0.1 0.4 GO:1900409 positive regulation of cellular response to oxidative stress(GO:1900409)
0.1 0.4 GO:0015675 nickel cation transport(GO:0015675)
0.1 1.2 GO:0009608 response to symbiont(GO:0009608)
0.1 0.3 GO:0042353 fucose biosynthetic process(GO:0042353)
0.1 0.4 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.1 0.2 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 0.4 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 0.2 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.1 0.4 GO:0000056 ribosomal small subunit export from nucleus(GO:0000056) regulation of protein export from nucleus(GO:0046825)
0.1 0.3 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.1 0.1 GO:0010617 circadian regulation of calcium ion oscillation(GO:0010617)
0.1 0.2 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.1 0.2 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 0.2 GO:0009996 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.1 0.2 GO:0044236 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 0.3 GO:0046713 borate transport(GO:0046713)
0.1 0.3 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.1 0.1 GO:0075733 intracellular transport of virus(GO:0075733) multi-organism intracellular transport(GO:1902583)
0.1 0.2 GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000447)
0.1 0.2 GO:0035247 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.1 0.2 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.1 0.2 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.1 0.4 GO:0043489 RNA stabilization(GO:0043489)
0.1 0.2 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.1 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.0 0.2 GO:0000393 spliceosomal conformational changes to generate catalytic conformation(GO:0000393)
0.0 0.2 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.0 0.1 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.0 0.4 GO:0046473 phosphatidic acid metabolic process(GO:0046473)
0.0 0.3 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.0 0.9 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.2 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.0 0.1 GO:0033240 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.0 0.2 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.0 0.1 GO:0006348 chromatin silencing at telomere(GO:0006348)
0.0 0.1 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.0 0.6 GO:0071329 cellular response to sucrose stimulus(GO:0071329)
0.0 0.2 GO:0007032 endosome organization(GO:0007032)
0.0 0.1 GO:0050996 positive regulation of fatty acid beta-oxidation(GO:0032000) positive regulation of lipid catabolic process(GO:0050996)
0.0 0.2 GO:0010271 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.0 0.2 GO:0097298 regulation of nucleus size(GO:0097298)
0.0 0.1 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.0 0.2 GO:0048863 stem cell differentiation(GO:0048863)
0.0 0.3 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.2 GO:0034635 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.0 0.2 GO:0080117 secondary growth(GO:0080117)
0.0 0.4 GO:0099587 inorganic cation import into cell(GO:0098659) inorganic ion import into cell(GO:0099587)
0.0 0.1 GO:0090143 nucleoid organization(GO:0090143)
0.0 0.2 GO:0046683 response to organophosphorus(GO:0046683)
0.0 0.7 GO:0072505 divalent inorganic anion homeostasis(GO:0072505)
0.0 0.1 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.0 0.1 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.0 0.1 GO:0010042 response to manganese ion(GO:0010042)
0.0 0.1 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.0 0.2 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.0 0.2 GO:0051955 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.0 0.2 GO:0048442 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.0 0.1 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.0 0.2 GO:0060919 auxin influx(GO:0060919)
0.0 0.1 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.0 0.1 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.0 0.2 GO:0043153 entrainment of circadian clock by photoperiod(GO:0043153)
0.0 0.1 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.0 0.1 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.0 0.2 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.0 0.1 GO:0009233 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
0.0 0.1 GO:0010273 detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169)
0.0 0.6 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 0.2 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.0 0.3 GO:0010315 auxin efflux(GO:0010315)
0.0 0.1 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.0 0.2 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.4 GO:0016577 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.0 0.1 GO:0010432 nectary development(GO:0010254) bract development(GO:0010432) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.0 0.4 GO:0010274 hydrotropism(GO:0010274)
0.0 0.1 GO:0019388 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.0 0.2 GO:0043480 cuticle hydrocarbon biosynthetic process(GO:0006723) pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.0 0.2 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.1 GO:0090065 regulation of production of siRNA involved in RNA interference(GO:0090065)
0.0 0.1 GO:0080168 abscisic acid transport(GO:0080168)
0.0 0.1 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.0 0.2 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.0 0.1 GO:0010520 regulation of reciprocal meiotic recombination(GO:0010520)
0.0 0.5 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.0 0.1 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.0 0.1 GO:0090547 response to low humidity(GO:0090547)
0.0 0.1 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 0.8 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.0 GO:0006824 cobalt ion transport(GO:0006824)
0.0 0.1 GO:0030259 lipid glycosylation(GO:0030259)
0.0 0.3 GO:0006490 oligosaccharide-lipid intermediate biosynthetic process(GO:0006490)
0.0 0.2 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.0 0.3 GO:1902456 regulation of stomatal opening(GO:1902456)
0.0 0.3 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 0.0 GO:0016237 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.0 0.4 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.0 0.1 GO:0072698 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.0 0.2 GO:0009957 epidermal cell fate specification(GO:0009957)
0.0 0.1 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.0 0.1 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.0 0.2 GO:0046348 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.1 GO:1904356 regulation of telomere maintenance via telomerase(GO:0032210) regulation of telomere maintenance via telomere lengthening(GO:1904356) negative regulation of DNA biosynthetic process(GO:2000279)
0.0 0.1 GO:0050792 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903) regulation of viral process(GO:0050792)
0.0 0.1 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.0 0.3 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.0 0.2 GO:0060866 leaf abscission(GO:0060866)
0.0 0.1 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.0 1.1 GO:0010311 lateral root formation(GO:0010311)
0.0 0.1 GO:0016540 protein autoprocessing(GO:0016540)
0.0 1.0 GO:0006099 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 0.1 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.1 GO:0046622 positive regulation of organ growth(GO:0046622)
0.0 0.1 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.1 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.0 0.3 GO:0048359 mucilage metabolic process involved in seed coat development(GO:0048359)
0.0 0.4 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.2 GO:0050879 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.0 0.6 GO:0051667 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.0 0.1 GO:0046500 S-adenosylmethionine metabolic process(GO:0046500)
0.0 0.2 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.2 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.0 0.1 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.0 0.1 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.0 0.1 GO:0090615 mitochondrial mRNA processing(GO:0090615)
0.0 0.4 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.1 GO:0006424 glutamyl-tRNA aminoacylation(GO:0006424)
0.0 0.1 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.0 0.1 GO:0080186 developmental vegetative growth(GO:0080186)
0.0 0.2 GO:2001289 lipid X metabolic process(GO:2001289)
0.0 0.2 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.0 GO:0031542 positive regulation of anthocyanin biosynthetic process(GO:0031542)
0.0 0.2 GO:0009088 threonine biosynthetic process(GO:0009088)
0.0 0.1 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.0 0.2 GO:0009113 purine nucleobase biosynthetic process(GO:0009113)
0.0 0.1 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.0 0.0 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.0 0.1 GO:0005980 glycogen catabolic process(GO:0005980)
0.0 0.5 GO:0006730 one-carbon metabolic process(GO:0006730)
0.0 0.1 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.0 0.1 GO:0051775 response to redox state(GO:0051775)
0.0 0.4 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.1 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.0 0.1 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.2 GO:0018345 protein palmitoylation(GO:0018345)
0.0 0.2 GO:0001709 cell fate determination(GO:0001709)
0.0 0.0 GO:0006561 proline biosynthetic process(GO:0006561)
0.0 0.1 GO:0071836 nectar secretion(GO:0071836)
0.0 0.0 GO:0043982 histone H4-K8 acetylation(GO:0043982)
0.0 0.1 GO:0010065 primary meristem tissue development(GO:0010065)
0.0 0.1 GO:0051646 mitochondrion localization(GO:0051646)
0.0 0.1 GO:0006283 transcription-coupled nucleotide-excision repair(GO:0006283)
0.0 0.0 GO:0019499 cyanide metabolic process(GO:0019499)
0.0 0.3 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.0 GO:0006436 tryptophanyl-tRNA aminoacylation(GO:0006436)
0.0 0.1 GO:0015693 magnesium ion transport(GO:0015693)
0.0 0.1 GO:0010101 post-embryonic root morphogenesis(GO:0010101) lateral root morphogenesis(GO:0010102)
0.0 0.1 GO:0033386 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.0 0.0 GO:0071491 red light signaling pathway(GO:0010161) cellular response to red light(GO:0071491)
0.0 0.7 GO:0071368 cellular response to cytokinin stimulus(GO:0071368)
0.0 0.1 GO:0006826 iron ion transport(GO:0006826)
0.0 0.6 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.1 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.1 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.0 0.0 GO:0055047 generative cell mitosis(GO:0055047)
0.0 0.1 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0016328 lateral plasma membrane(GO:0016328)
0.1 0.3 GO:0042788 polysomal ribosome(GO:0042788)
0.1 1.2 GO:0031012 extracellular matrix(GO:0031012)
0.1 0.3 GO:0071818 BAT3 complex(GO:0071818)
0.1 0.2 GO:0005652 nuclear lamina(GO:0005652)
0.0 0.3 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.0 0.9 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.3 GO:0090395 plant cell papilla(GO:0090395)
0.0 0.1 GO:0009501 amyloplast(GO:0009501)
0.0 0.2 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.0 0.3 GO:0005884 actin filament(GO:0005884)
0.0 0.1 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.0 0.2 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.0 0.1 GO:0031429 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.0 0.1 GO:0005775 vacuolar lumen(GO:0005775)
0.0 0.1 GO:0001673 male germ cell nucleus(GO:0001673)
0.0 0.1 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.0 0.1 GO:0010330 cellulose synthase complex(GO:0010330) microtubule end(GO:1990752)
0.0 0.1 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.0 0.2 GO:0089701 U2AF(GO:0089701)
0.0 0.4 GO:0030686 90S preribosome(GO:0030686)
0.0 0.1 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.2 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.0 0.2 GO:0045298 tubulin complex(GO:0045298)
0.0 0.1 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.0 0.1 GO:0070390 transcription export complex 2(GO:0070390)
0.0 0.1 GO:0035619 root hair tip(GO:0035619)
0.0 0.4 GO:0032040 small-subunit processome(GO:0032040)
0.0 0.1 GO:0034715 pICln-Sm protein complex(GO:0034715)
0.0 0.1 GO:0030870 Mre11 complex(GO:0030870)
0.0 0.1 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 0.1 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 0.4 GO:1903293 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 0.1 GO:0005845 mRNA cap binding complex(GO:0005845)
0.0 0.2 GO:0005720 nuclear heterochromatin(GO:0005720)
0.0 0.7 GO:0016607 nuclear speck(GO:0016607)
0.0 1.8 GO:0046658 anchored component of plasma membrane(GO:0046658)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.2 0.7 GO:0050162 oxalate oxidase activity(GO:0050162)
0.1 1.0 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.5 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.5 GO:0050347 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.1 0.4 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.1 0.4 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.1 0.3 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.1 0.8 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.4 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.1 0.4 GO:0019172 glyoxalase III activity(GO:0019172)
0.1 0.2 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 0.5 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 0.2 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.1 0.5 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.2 GO:0016504 peptidase activator activity(GO:0016504)
0.1 0.2 GO:0016643 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.1 0.5 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.2 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.1 0.3 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.1 0.2 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.1 0.3 GO:0005223 intracellular cGMP activated cation channel activity(GO:0005223)
0.1 0.2 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.1 0.2 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.1 0.3 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.4 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.1 0.2 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.0 0.2 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.2 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.0 0.9 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.0 0.2 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.9 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.6 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.5 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.0 0.1 GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity(GO:0008963)
0.0 0.1 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.0 0.2 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.0 0.1 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.0 0.1 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.0 0.3 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 1.2 GO:0048029 monosaccharide binding(GO:0048029)
0.0 0.3 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.0 0.1 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.0 0.2 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.0 0.1 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.0 0.1 GO:0004774 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.0 0.1 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.0 0.3 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 0.1 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.0 0.3 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.1 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.0 0.1 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.0 0.2 GO:0035197 siRNA binding(GO:0035197)
0.0 1.1 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.1 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.0 0.1 GO:0016418 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.0 0.1 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.0 0.1 GO:0004174 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.0 0.2 GO:0043142 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.3 GO:0010485 H4 histone acetyltransferase activity(GO:0010485)
0.0 0.5 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.2 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.0 0.1 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.0 0.3 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.0 0.1 GO:0019776 Atg8 ligase activity(GO:0019776) Atg8 activating enzyme activity(GO:0019779)
0.0 0.2 GO:0019202 amino acid kinase activity(GO:0019202)
0.0 0.2 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.0 0.1 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.0 0.2 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.0 0.1 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.0 0.1 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.0 0.1 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.0 0.1 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.0 0.3 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.1 GO:0030527 structural constituent of chromatin(GO:0030527)
0.0 0.6 GO:0004568 chitinase activity(GO:0004568)
0.0 0.1 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.1 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.0 0.1 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.0 0.1 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.0 0.4 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 0.3 GO:0080161 auxin efflux transmembrane transporter activity(GO:0010329) auxin transmembrane transporter activity(GO:0080161)
0.0 0.1 GO:0000035 acyl binding(GO:0000035)
0.0 0.5 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.4 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.2 GO:0031078 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.2 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 0.2 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.0 0.1 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.0 0.4 GO:0008143 poly(A) binding(GO:0008143)
0.0 0.1 GO:0032135 DNA insertion or deletion binding(GO:0032135)
0.0 0.4 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.1 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 0.1 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.0 0.1 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 0.1 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.2 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.1 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.0 0.1 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.0 0.1 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.1 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.1 GO:0010011 auxin binding(GO:0010011)
0.0 0.1 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.0 0.1 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.0 0.8 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.5 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.0 0.2 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.1 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.0 0.1 GO:0030332 cyclin binding(GO:0030332)
0.0 0.1 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.0 0.1 GO:0052654 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.0 0.2 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.2 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.2 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.1 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.0 0.2 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.0 GO:0000064 L-ornithine transmembrane transporter activity(GO:0000064) azole transmembrane transporter activity(GO:1901474)
0.0 0.1 GO:0035198 miRNA binding(GO:0035198)
0.0 0.1 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.0 0.2 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.3 GO:0051787 misfolded protein binding(GO:0051787)
0.0 0.8 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.3 GO:0010427 abscisic acid binding(GO:0010427)
0.0 0.8 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 1.0 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.7 GO:0016831 carboxy-lyase activity(GO:0016831)
0.0 0.2 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.0 GO:0010521 telomerase inhibitor activity(GO:0010521)
0.0 0.3 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.0 GO:0008821 crossover junction endodeoxyribonuclease activity(GO:0008821)
0.0 0.5 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.0 GO:0004830 tryptophan-tRNA ligase activity(GO:0004830)
0.0 0.2 GO:1901981 phosphatidylinositol phosphate binding(GO:1901981)
0.0 0.0 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.0 0.1 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.0 0.2 GO:0004629 phospholipase C activity(GO:0004629)
0.0 0.0 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.0 0.2 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 0.1 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.5 GO:0036442 hydrogen-exporting ATPase activity(GO:0036442)
0.0 0.1 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 1.1 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.0 GO:1990841 promoter-specific chromatin binding(GO:1990841)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.0 0.2 PID MTOR 4PATHWAY mTOR signaling pathway
0.0 0.1 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.0 0.1 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.0 0.1 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.0 0.2 PID RAC1 PATHWAY RAC1 signaling pathway
0.0 0.1 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.1 0.3 REACTOME DEADENYLATION OF MRNA Genes involved in Deadenylation of mRNA
0.0 0.1 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.0 0.2 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.0 0.1 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.0 0.2 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.0 0.1 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.0 0.1 REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE Genes involved in Synthesis of PIPs at the Golgi membrane
0.0 0.1 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.0 0.1 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle