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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT3G02940

Z-value: 1.15

Transcription factors associated with AT3G02940

Gene Symbol Gene ID Gene Info
AT3G02940
AT3G02940 myb domain protein 107

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB107arTal_v1_Chr3_+_661849_6618490.761.5e-03Click!

Activity profile of AT3G02940 motif

Sorted Z-values of AT3G02940 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr3_+_4104463_4104463 2.15 AT3G12900.1
AT3G12900
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr5_-_14753088_14753088 1.96 AT5G37260.1
RVE2
Homeodomain-like superfamily protein
arTal_v1_Chr1_-_10164452_10164452 1.88 AT1G29090.1
AT1G29090
Cysteine proteinases superfamily protein
arTal_v1_Chr4_+_10707344_10707378 1.71 AT4G19690.2
AT4G19690.1
IRT1
iron-regulated transporter 1
arTal_v1_Chr1_+_5872024_5872024 1.67 AT1G17180.1
GSTU25
glutathione S-transferase TAU 25
arTal_v1_Chr4_+_8646150_8646150 1.48 AT4G15160.2
AT4G15160.1
AT4G15160
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr4_-_15954803_15954803 1.42 AT4G33070.1
AT4G33070
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
arTal_v1_Chr4_-_13016235_13016235 1.36 AT4G25470.1
CBF2
C-repeat/DRE binding factor 2
arTal_v1_Chr3_-_21085245_21085245 1.31 AT3G56970.1
bHLH38
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr3_+_2465235_2465235 1.27 AT3G07720.1
AT3G07720
Galactose oxidase/kelch repeat superfamily protein
arTal_v1_Chr3_-_7796310_7796460 1.26 AT3G22120.1
AT3G22120.2
CWLP
cell wall-plasma membrane linker protein
arTal_v1_Chr4_+_8827600_8827710 1.13 AT4G15430.2
AT4G15430.1
AT4G15430
ERD (early-responsive to dehydration stress) family protein
arTal_v1_Chr1_-_16917053_16917053 1.12 AT1G44800.1
SIAR1
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr3_+_4449259_4449259 1.12 AT3G13610.1
AT3G13610
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr4_-_14542565_14542565 1.11 AT4G29690.1
AT4G29690
Alkaline-phosphatase-like family protein
arTal_v1_Chr3_-_10704010_10704018 1.07 AT3G28550.1
AT3G28550.2
AT3G28550
Proline-rich extensin-like family protein
arTal_v1_Chr3_+_3595694_3595694 1.07 AT3G11430.1
GPAT5
glycerol-3-phosphate acyltransferase 5
arTal_v1_Chr5_+_4370692_4370692 1.00 AT5G13580.1
ABCG6
ABC-2 type transporter family protein
arTal_v1_Chr4_-_9844290_9844334 0.98 AT4G17680.3
AT4G17680.2
AT4G17680.1
AT4G17680
SBP (S-ribonuclease binding protein) family protein
arTal_v1_Chr1_+_23331563_23331563 0.98 AT1G62980.1
EXPA18
expansin A18
arTal_v1_Chr4_+_700566_700566 0.97 AT4G01630.1
EXPA17
expansin A17
arTal_v1_Chr1_+_16263805_16263805 0.95 AT1G43160.1
RAP2.6
related to AP2 6
arTal_v1_Chr2_+_14892495_14892495 0.95 AT2G35380.2
AT2G35380.1
AT2G35380
Peroxidase superfamily protein
arTal_v1_Chr1_+_1529767_1529767 0.95 AT1G05260.1
RCI3
Peroxidase superfamily protein
arTal_v1_Chr5_+_22388782_22388782 0.94 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr5_-_2365605_2365605 0.94 AT5G07475.1
AT5G07475
Cupredoxin superfamily protein
arTal_v1_Chr1_-_27989865_27989865 0.94 AT1G74460.1
AT1G74460
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr4_-_18206684_18206684 0.93 AT4G39070.1
BZS1
B-box zinc finger family protein
arTal_v1_Chr2_-_18821889_18821889 0.91 AT2G45680.1
TCP9
TCP family transcription factor
arTal_v1_Chr5_+_8687188_8687188 0.91 AT5G25160.1
ZFP3
zinc finger protein 3
arTal_v1_Chr5_+_22388521_22388521 0.91 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr4_+_14762819_14762819 0.89 AT4G30170.1
AT4G30170
Peroxidase family protein
arTal_v1_Chr5_-_6547127_6547177 0.88 AT5G19410.1
AT5G19410.2
ABCG23
ABC-2 type transporter family protein
arTal_v1_Chr4_-_9680389_9680389 0.87 AT4G17280.1
AT4G17280
Auxin-responsive family protein
arTal_v1_Chr3_+_415389_415389 0.85 AT3G02230.1
RGP1
reversibly glycosylated polypeptide 1
arTal_v1_Chr5_+_1835047_1835047 0.85 AT5G06090.1
GPAT7
glycerol-3-phosphate acyltransferase 7
arTal_v1_Chr2_-_9049404_9049404 0.84 AT2G21100.1
AT2G21100.2
AT2G21100
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr4_-_14958080_14958080 0.84 AT4G30670.1
AT4G30670
Putative membrane lipoprotein
arTal_v1_Chr5_+_18791575_18791575 0.84 AT5G46330.1
AT5G46330.2
FLS2
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr5_+_894582_894582 0.83 AT5G03545.1
AT5G03545
expressed in response to phosphate starvation protein
arTal_v1_Chr5_+_16431304_16431391 0.83 AT5G41040.1
AT5G41040.2
RWP1
HXXXD-type acyl-transferase family protein
arTal_v1_Chr4_-_810574_810611 0.83 AT4G01870.1
AT4G01870.2
AT4G01870
tolB protein-like protein
arTal_v1_Chr5_+_463073_463073 0.83 AT5G02260.1
EXPA9
expansin A9
arTal_v1_Chr3_+_8008534_8008534 0.82 AT3G22620.1
AT3G22620
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr2_+_7703805_7703947 0.82 AT2G17730.1
AT2G17730.2
NIP2
NEP-interacting protein 2
arTal_v1_Chr5_-_7805968_7805968 0.82 AT5G23190.1
CYP86B1
cytochrome P450, family 86, subfamily B, polypeptide 1
arTal_v1_Chr5_-_4026849_4026849 0.82 AT5G12420.1
AT5G12420.2
AT5G12420
O-acyltransferase (WSD1-like) family protein
arTal_v1_Chr1_-_9890875_9891015 0.82 AT1G28290.2
AT1G28290.1
AGP31
arabinogalactan protein 31
arTal_v1_Chr1_-_20156520_20156520 0.80 AT1G54000.1
GLL22
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr3_+_23182722_23182722 0.80 AT3G62680.1
PRP3
proline-rich protein 3
arTal_v1_Chr5_+_630748_630876 0.80 AT5G02780.1
AT5G02780.3
AT5G02780.2
GSTL1
glutathione transferase lambda 1
arTal_v1_Chr3_-_8007836_8007836 0.80 AT3G22600.1
AT3G22600
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr4_-_18581696_18581696 0.79 AT4G40090.1
AGP3
arabinogalactan protein 3
arTal_v1_Chr4_-_12533924_12533924 0.79 AT4G24140.1
AT4G24140
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_-_20142763_20142763 0.79 AT3G54400.1
AT3G54400
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_-_5759817_5759817 0.78 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
arTal_v1_Chr1_+_5638779_5638779 0.77 AT1G16500.1
AT1G16500
filamentous hemagglutinin transporter
arTal_v1_Chr4_+_2572621_2572621 0.76 AT4G05020.2
NDB2
NAD(P)H dehydrogenase B2
arTal_v1_Chr1_+_20462940_20462940 0.76 AT1G54890.1
AT1G54890
Late embryogenesis abundant (LEA) protein-like protein
arTal_v1_Chr4_+_2572427_2572427 0.76 AT4G05020.1
NDB2
NAD(P)H dehydrogenase B2
arTal_v1_Chr1_+_920950_920950 0.76 AT1G03700.1
AT1G03700
Uncharacterized protein family (UPF0497)
arTal_v1_Chr2_-_19207608_19207608 0.76 AT2G46740.1
GulLO5
D-arabinono-1,4-lactone oxidase family protein
arTal_v1_Chr1_-_22950444_22950488 0.75 AT1G62085.1
AT1G62085.2
AT1G62085
Mitochondrial transcription termination factor family protein
arTal_v1_Chr5_+_20427749_20427749 0.75 AT5G50175.1
AT5G50175
transmembrane protein
arTal_v1_Chr1_+_18305445_18305445 0.75 AT1G49450.1
AT1G49450
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_+_17382998_17382998 0.75 AT1G47395.1
AT1G47395
hypothetical protein
arTal_v1_Chr3_-_19747114_19747114 0.74 AT3G53260.1
PAL2
phenylalanine ammonia-lyase 2
arTal_v1_Chr1_-_22871298_22871358 0.74 AT1G61890.3
AT1G61890.1
AT1G61890.2
AT1G61890
MATE efflux family protein
arTal_v1_Chr3_-_19139423_19139423 0.73 AT3G51600.1
LTP5
lipid transfer protein 5
arTal_v1_Chr4_+_9655669_9655669 0.72 AT4G17215.1
AT4G17215
Pollen Ole e 1 allergen and extensin family protein
arTal_v1_Chr5_+_5092140_5092140 0.72 AT5G15650.1
RGP2
reversibly glycosylated polypeptide 2
arTal_v1_Chr1_+_21136835_21136835 0.72 AT1G56430.1
NAS4
nicotianamine synthase 4
arTal_v1_Chr2_-_15036556_15036556 0.72 AT2G35770.1
scpl28
serine carboxypeptidase-like 28
arTal_v1_Chr4_-_10148656_10148764 0.72 AT4G18360.4
AT4G18360.2
AT4G18360.1
AT4G18360.3
GOX3
Aldolase-type TIM barrel family protein
arTal_v1_Chr1_-_7550741_7550741 0.71 AT1G21540.1
AT1G21540
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr5_+_21771811_21771811 0.71 AT5G53590.1
AT5G53590
SAUR-like auxin-responsive protein family
arTal_v1_Chr4_-_14257965_14257965 0.71 AT4G28890.1
AT4G28890
RING/U-box superfamily protein
arTal_v1_Chr4_-_15275404_15275404 0.71 AT4G31500.1
CYP83B1
cytochrome P450, family 83, subfamily B, polypeptide 1
arTal_v1_Chr1_+_3919237_3919237 0.70 AT1G11655.1
AT1G11655
hypothetical protein
arTal_v1_Chr5_-_17943283_17943283 0.70 AT5G44550.1
AT5G44550
Uncharacterized protein family (UPF0497)
arTal_v1_Chr3_+_3203988_3203988 0.70 AT3G10340.1
PAL4
phenylalanine ammonia-lyase 4
arTal_v1_Chr3_-_1756924_1756924 0.70 AT3G05880.1
RCI2A
Low temperature and salt responsive protein family
arTal_v1_Chr3_+_16138375_16138375 0.70 AT3G44550.2
FAR5
fatty acid reductase 5
arTal_v1_Chr2_+_6761635_6761635 0.70 AT2G15490.2
AT2G15490.3
AT2G15490.1
UGT73B4
UDP-glycosyltransferase 73B4
arTal_v1_Chr2_+_10024150_10024150 0.70 AT2G23540.1
AT2G23540
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr2_-_10711281_10711281 0.70 AT2G25160.2
AT2G25160.1
CYP82F1
cytochrome P450, family 82, subfamily F, polypeptide 1
arTal_v1_Chr3_-_2825114_2825241 0.69 AT3G09200.2
AT3G09200.1
AT3G09200
Ribosomal protein L10 family protein
arTal_v1_Chr1_+_18546086_18546165 0.69 AT1G50050.2
AT1G50050.1
AT1G50050
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
arTal_v1_Chr4_-_682601_682601 0.69 AT4G01575.1
AT4G01575
serine protease inhibitor, Kazal-type family protein
arTal_v1_Chr2_+_13381767_13381767 0.68 AT2G31380.1
STH
salt tolerance homologue
arTal_v1_Chr5_-_4481950_4481950 0.68 AT5G13900.1
AT5G13900
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr3_-_19629204_19629204 0.68 AT3G52930.1
FBA8
Aldolase superfamily protein
arTal_v1_Chr5_-_2958971_2958971 0.68 AT5G09520.1
PELPK2
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr2_+_17527167_17527167 0.68 AT2G41990.1
AT2G41990
late embryogenesis abundant protein
arTal_v1_Chr3_-_23046153_23046153 0.68 AT3G62270.1
AT3G62270
HCO3- transporter family
arTal_v1_Chr5_+_25328119_25328119 0.67 AT5G63140.1
PAP29
purple acid phosphatase 29
arTal_v1_Chr1_-_5783840_5783840 0.67 AT1G16905.1
AT1G16905
Curculin-like (mannose-binding) lectin family protein
arTal_v1_Chr1_+_1425539_1425539 0.67 AT1G05000.3
AT1G05000.1
AT1G05000.2
PFA-DSP1
Phosphotyrosine protein phosphatases superfamily protein
arTal_v1_Chr3_+_6393747_6393747 0.67 AT3G18560.1
AT3G18560
hypothetical protein
arTal_v1_Chr5_+_4087689_4087689 0.67 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_+_17002089_17002089 0.67 AT1G44970.1
AT1G44970
Peroxidase superfamily protein
arTal_v1_Chr5_-_1742161_1742186 0.67 AT5G05790.2
AT5G05790.1
AT5G05790
Duplicated homeodomain-like superfamily protein
arTal_v1_Chr4_+_16596640_16596640 0.66 AT4G34800.1
AT4G34800
SAUR-like auxin-responsive protein family
arTal_v1_Chr5_-_17421982_17421982 0.66 AT5G43380.1
AT5G43380.2
AT5G43380.3
TOPP6
type one serine/threonine protein phosphatase 6
arTal_v1_Chr1_-_507268_507268 0.66 AT1G02460.1
AT1G02460
Pectin lyase-like superfamily protein
arTal_v1_Chr4_-_9250343_9250343 0.66 AT4G16370.1
OPT3
oligopeptide transporter
arTal_v1_Chr5_+_16161449_16161449 0.66 AT5G40390.1
SIP1
Raffinose synthase family protein
arTal_v1_Chr3_+_16137576_16137576 0.65 AT3G44550.1
FAR5
fatty acid reductase 5
arTal_v1_Chr5_-_3172701_3172701 0.65 AT5G10130.1
AT5G10130
Pollen Ole e 1 allergen and extensin family protein
arTal_v1_Chr4_-_17267472_17267472 0.64 AT4G36610.1
AT4G36610
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr2_+_17367492_17367492 0.64 AT2G41660.1
MIZ1
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
arTal_v1_Chr1_+_19862821_19862821 0.64 AT1G53270.1
ABCG10
ABC-2 type transporter family protein
arTal_v1_Chr2_-_18095093_18095093 0.64 AT2G43620.1
AT2G43620
Chitinase family protein
arTal_v1_Chr4_-_15022445_15022505 0.64 AT4G30850.2
AT4G30850.1
HHP2
heptahelical transmembrane protein2
arTal_v1_Chr5_-_21357219_21357219 0.64 AT5G52650.1
AT5G52650
RNA binding Plectin/S10 domain-containing protein
arTal_v1_Chr1_+_28561281_28561281 0.64 AT1G76130.1
AMY2
alpha-amylase-like 2
arTal_v1_Chr1_-_20368511_20368511 0.63 AT1G54540.1
AT1G54540
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr3_+_673428_673428 0.63 AT3G02990.1
HSFA1E
heat shock transcription factor A1E
arTal_v1_Chr4_-_10934225_10934237 0.62 AT4G20240.1
AT4G20240.2
CYP71A27
cytochrome P450, family 71, subfamily A, polypeptide 27
arTal_v1_Chr1_-_29203418_29203418 0.62 AT1G77690.1
LAX3
like AUX1 3
arTal_v1_Chr4_+_15455083_15455083 0.62 AT4G31950.1
CYP82C3
cytochrome P450, family 82, subfamily C, polypeptide 3
arTal_v1_Chr1_+_29373803_29373889 0.61 AT1G78090.1
AT1G78090.2
TPPB
trehalose-6-phosphate phosphatase
arTal_v1_Chr3_-_7457393_7457404 0.61 AT3G21240.2
AT3G21240.1
AT3G21240.3
4CL2
4-coumarate:CoA ligase 2
arTal_v1_Chr4_+_16904059_16904059 0.61 AT4G35630.1
PSAT
phosphoserine aminotransferase
arTal_v1_Chr4_+_12649985_12649987 0.61 AT4G24480.2
AT4G24480.1
AT4G24480.3
AT4G24480
Protein kinase superfamily protein
arTal_v1_Chr5_+_4432297_4432306 0.61 AT5G13740.2
AT5G13740.1
ZIF1
zinc induced facilitator 1
arTal_v1_Chr5_+_6687030_6687030 0.60 AT5G19780.1
TUA5
tubulin alpha-5
arTal_v1_Chr1_-_7455009_7455009 0.60 AT1G21310.1
EXT3
extensin 3
arTal_v1_Chr3_-_10231567_10231567 0.60 AT3G27630.1
AT3G27630
cyclin-dependent kinase inhibitor SMR3-like protein
arTal_v1_Chr5_+_22261134_22261134 0.60 AT5G54800.1
GPT1
glucose 6-phosphate/phosphate translocator 1
arTal_v1_Chr2_-_14592140_14592140 0.60 AT2G34650.1
PID
Protein kinase superfamily protein
arTal_v1_Chr2_+_13450241_13450241 0.60 AT2G31610.1
AT2G31610
Ribosomal protein S3 family protein
arTal_v1_Chr4_-_12147993_12148041 0.60 AT4G23200.2
AT4G23200.1
CRK12
cysteine-rich RLK (RECEPTOR-like protein kinase) 12
arTal_v1_Chr1_+_3086101_3086101 0.60 AT1G09540.1
MYB61
myb domain protein 61
arTal_v1_Chr4_-_14776247_14776247 0.60 AT4G30190.1
HA2
H[+]-ATPase 2
arTal_v1_Chr3_+_21073330_21073421 0.59 AT3G56930.1
AT3G56930.2
AT3G56930
DHHC-type zinc finger family protein
arTal_v1_Chr4_+_16680209_16680323 0.59 AT4G35040.2
AT4G35040.1
AT4G35040.3
AT4G35040.4
bZIP19
Basic-leucine zipper (bZIP) transcription factor family protein
arTal_v1_Chr5_-_8331963_8331963 0.59 AT5G24400.1
EMB2024
NagB/RpiA/CoA transferase-like superfamily protein
arTal_v1_Chr2_-_15481377_15481412 0.59 AT2G36880.2
AT2G36880.1
MAT3
methionine adenosyltransferase 3
arTal_v1_Chr4_-_14776058_14776058 0.59 AT4G30190.2
HA2
H[+]-ATPase 2
arTal_v1_Chr1_+_28291698_28291698 0.59 AT1G75390.1
AT1G75390.2
bZIP44
basic leucine-zipper 44
arTal_v1_Chr5_+_23693259_23693259 0.59 AT5G58620.1
AT5G58620
zinc finger (CCCH-type) family protein
arTal_v1_Chr3_-_4739298_4739298 0.59 AT3G14230.2
RAP2.2
related to AP2 2
arTal_v1_Chr1_+_23747304_23747304 0.59 AT1G64000.1
WRKY56
WRKY DNA-binding protein 56
arTal_v1_Chr5_-_967432_967432 0.59 AT5G03700.1
AT5G03700
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
arTal_v1_Chr2_+_8647721_8647721 0.58 AT2G20030.1
AT2G20030
RING/U-box superfamily protein
arTal_v1_Chr3_-_4739136_4739136 0.58 AT3G14230.1
AT3G14230.3
RAP2.2
related to AP2 2
arTal_v1_Chr2_-_19685997_19686056 0.58 AT2G48130.3
AT2G48130.2
AT2G48130.6
AT2G48130.1
AT2G48130.5
AT2G48130.4
AT2G48130
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr1_+_7366775_7366775 0.58 AT1G21050.1
AT1G21050
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
arTal_v1_Chr5_-_8987898_8987898 0.58 AT5G25810.1
tny
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_-_4845847_4845913 0.58 AT1G14170.2
AT1G14170.1
AT1G14170.3
AT1G14170
RNA-binding KH domain-containing protein
arTal_v1_Chr5_-_4566988_4566988 0.58 AT5G14150.1
AT5G14150.2
AT5G14150
Emb:.1 protein, putative (Protein of unknown function, DUF642)
arTal_v1_Chr4_+_18525246_18525246 0.58 AT4G39950.1
CYP79B2
cytochrome P450, family 79, subfamily B, polypeptide 2
arTal_v1_Chr4_-_17687105_17687105 0.58 AT4G37640.1
ACA2
calcium ATPase 2
arTal_v1_Chr1_+_28560629_28560629 0.58 AT1G76130.2
AMY2
alpha-amylase-like 2
arTal_v1_Chr1_-_24395503_24395503 0.58 AT1G65610.1
KOR2
Six-hairpin glycosidases superfamily protein
arTal_v1_Chr4_+_18525042_18525042 0.57 AT4G39950.2
CYP79B2
cytochrome P450, family 79, subfamily B, polypeptide 2
arTal_v1_Chr4_+_596397_596399 0.57 AT4G01440.3
AT4G01440.2
AT4G01440.1
AT4G01440.4
UMAMIT31
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr2_-_12932828_12932828 0.57 AT2G30340.2
AT2G30340.1
LBD13
LOB domain-containing protein 13
arTal_v1_Chr5_+_24288596_24288664 0.57 AT5G60390.1
AT5G60390.2
AT5G60390.3
AT5G60390
GTP binding Elongation factor Tu family protein
arTal_v1_Chr1_-_21086499_21086499 0.57 AT1G56320.1
AT1G56320
hypothetical protein
arTal_v1_Chr4_-_8794433_8794442 0.57 AT4G15390.1
AT4G15390.2
AT4G15390
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_-_15201168_15201197 0.57 AT5G38100.4
AT5G38100.1
AT5G38100.2
AT5G38100
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_-_25870227_25870227 0.57 AT1G68825.1
RTFL15
ROTUNDIFOLIA like 15
arTal_v1_Chr2_-_15955752_15955752 0.57 AT2G38110.1
GPAT6
glycerol-3-phosphate acyltransferase 6
arTal_v1_Chr4_-_13216586_13216586 0.57 AT4G26060.1
AT4G26060
Ribosomal protein L18ae family
arTal_v1_Chr1_+_7366590_7366590 0.56 AT1G21050.2
AT1G21050
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
arTal_v1_Chr2_+_8426117_8426117 0.56 AT2G19450.1
TAG1
membrane bound O-acyl transferase (MBOAT) family protein
arTal_v1_Chr2_-_15560755_15560755 0.56 AT2G37040.1
PAL1
PHE ammonia lyase 1
arTal_v1_Chr1_-_654457_654457 0.56 AT1G02900.1
RALF1
rapid alkalinization factor 1
arTal_v1_Chr5_-_17157857_17157857 0.56 AT5G42785.1
AT5G42785
transmembrane protein
arTal_v1_Chr4_+_1569937_1569937 0.56 AT4G03540.1
AT4G03540
Uncharacterized protein family (UPF0497)
arTal_v1_Chr1_-_8414886_8414886 0.56 AT1G23800.1
AT1G23800.2
ALDH2B7
aldehyde dehydrogenase 2B7
arTal_v1_Chr5_-_779424_779424 0.55 AT5G03260.1
LAC11
laccase 11
arTal_v1_Chr4_+_8925571_8925571 0.55 AT4G15660.1
AT4G15660
Thioredoxin superfamily protein
arTal_v1_Chr5_-_8009436_8009436 0.55 AT5G23740.1
RPS11-BETA
ribosomal protein S11-beta
arTal_v1_Chr2_+_12805667_12805714 0.55 AT2G30010.2
AT2G30010.1
TBL45
TRICHOME BIREFRINGENCE-LIKE 45
arTal_v1_Chr4_-_11032677_11032754 0.55 AT4G20460.1
AT4G20470.1
AT4G20460
AT4G20470
NAD(P)-binding Rossmann-fold superfamily protein
transmembrane protein
arTal_v1_Chr1_+_21652988_21652988 0.55 AT1G58340.1
ZF14
MATE efflux family protein
arTal_v1_Chr5_-_18776735_18776839 0.55 AT5G46290.2
AT5G46290.3
AT5G46290.1
KASI
3-ketoacyl-acyl carrier protein synthase I
arTal_v1_Chr3_-_5148340_5148340 0.55 AT3G15300.1
AT3G15300
VQ motif-containing protein
arTal_v1_Chr2_+_18677311_18677311 0.55 AT2G45300.4
AT2G45300.3
AT2G45300.2
AT2G45300.1
AT2G45300
RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
arTal_v1_Chr4_-_9726834_9726834 0.55 AT4G17430.1
AT4G17430
O-fucosyltransferase family protein
arTal_v1_Chr1_-_8688246_8688247 0.54 AT1G24510.1
AT1G24510.2
AT1G24510.3
AT1G24510
TCP-1/cpn60 chaperonin family protein
arTal_v1_Chr5_-_3018342_3018342 0.54 AT5G09730.1
BXL3
beta-xylosidase 3
arTal_v1_Chr5_+_5087219_5087219 0.54 AT5G15640.1
AT5G15640.2
AT5G15640
Mitochondrial substrate carrier family protein
arTal_v1_Chr1_+_9298670_9298670 0.54 AT1G26840.1
ORC6
origin recognition complex protein 6
arTal_v1_Chr1_-_29077390_29077390 0.54 AT1G77380.1
AAP3
amino acid permease 3
arTal_v1_Chr1_-_9544303_9544303 0.54 AT1G27470.1
AT1G27470
transducin family protein / WD-40 repeat family protein
arTal_v1_Chr3_+_9480746_9480839 0.54 AT3G25900.1
AT3G25900.3
AT3G25900.2
HMT-1
Homocysteine S-methyltransferase family protein
arTal_v1_Chr4_+_11006815_11006815 0.54 AT4G20390.1
AT4G20390
Uncharacterized protein family (UPF0497)
arTal_v1_Chr1_+_25508639_25508639 0.54 AT1G68050.1
FKF1
flavin-binding, kelch repeat, f box 1
arTal_v1_Chr3_-_1268350_1268378 0.54 AT3G04670.2
AT3G04670.1
WRKY39
WRKY DNA-binding protein 39
arTal_v1_Chr4_+_13275200_13275200 0.53 AT4G26200.1
ACS7
1-amino-cyclopropane-1-carboxylate synthase 7
arTal_v1_Chr5_-_1925407_1925407 0.53 AT5G06300.1
LOG7
Putative lysine decarboxylase family protein
arTal_v1_Chr5_-_6222811_6222811 0.53 AT5G18661.1
AT5G18661
transmembrane protein
arTal_v1_Chr5_-_19735489_19735490 0.53 AT5G48657.6
AT5G48657.5
AT5G48657.1
AT5G48657
defense protein-like protein
arTal_v1_Chr5_-_2655732_2655870 0.53 AT5G08250.1
AT5G08250.2
AT5G08250
Cytochrome P450 superfamily protein
arTal_v1_Chr4_-_10321573_10321573 0.53 AT4G18800.1
RABA1d
RAB GTPase homolog A1D
arTal_v1_Chr5_+_9234600_9234600 0.53 AT5G26310.1
UGT72E3
UDP-Glycosyltransferase superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G02940

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.7 GO:0015675 nickel cation transport(GO:0015675)
0.4 0.8 GO:0015802 basic amino acid transport(GO:0015802)
0.4 1.2 GO:1990532 stress response to nickel ion(GO:1990532)
0.3 1.2 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.3 0.8 GO:0015786 UDP-glucose transport(GO:0015786)
0.3 1.8 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.2 1.2 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.2 1.2 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.2 1.7 GO:0043090 amino acid import(GO:0043090)
0.2 0.7 GO:0019593 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.2 1.2 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.2 5.7 GO:0010345 suberin biosynthetic process(GO:0010345)
0.2 0.6 GO:0010377 guard cell fate commitment(GO:0010377) regulation of G1/S transition of mitotic cell cycle(GO:2000045) regulation of genetic imprinting(GO:2000653)
0.2 0.7 GO:0072351 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.2 0.4 GO:0006348 chromatin silencing at telomere(GO:0006348)
0.2 0.5 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.2 0.5 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.2 1.5 GO:0010230 alternative respiration(GO:0010230)
0.2 1.5 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.2 4.9 GO:0010143 cutin biosynthetic process(GO:0010143)
0.2 0.2 GO:0071280 cellular response to copper ion(GO:0071280)
0.2 0.5 GO:0010792 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.2 0.9 GO:1900458 negative regulation of brassinosteroid mediated signaling pathway(GO:1900458)
0.2 0.5 GO:0032414 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.2 0.6 GO:0034635 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.2 0.3 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 0.6 GO:0034389 lipid particle organization(GO:0034389)
0.1 0.7 GO:0046208 spermine catabolic process(GO:0046208)
0.1 0.7 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.1 0.6 GO:0006097 glyoxylate cycle(GO:0006097)
0.1 0.4 GO:0070207 protein homotrimerization(GO:0070207)
0.1 0.4 GO:0071258 cellular response to gravity(GO:0071258)
0.1 0.4 GO:0042539 hypotonic salinity response(GO:0042539)
0.1 0.4 GO:0032196 transposition(GO:0032196)
0.1 0.7 GO:0006169 adenosine salvage(GO:0006169) adenosine biosynthetic process(GO:0046086)
0.1 0.4 GO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.1 0.4 GO:0042353 fucose biosynthetic process(GO:0042353)
0.1 0.5 GO:0019427 acetate metabolic process(GO:0006083) acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.1 0.4 GO:0006425 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.1 0.5 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 1.0 GO:2001006 regulation of beta-glucan metabolic process(GO:0032950) regulation of beta-glucan biosynthetic process(GO:0032951) regulation of cellulose biosynthetic process(GO:2001006)
0.1 0.4 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 0.6 GO:0060919 auxin influx(GO:0060919)
0.1 0.7 GO:1904961 quiescent center organization(GO:1904961)
0.1 0.9 GO:0048830 adventitious root development(GO:0048830)
0.1 1.3 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.1 0.6 GO:0048455 stamen formation(GO:0048455)
0.1 0.5 GO:0006023 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.1 0.4 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.1 0.4 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.1 0.4 GO:0015696 ammonium transport(GO:0015696)
0.1 0.2 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.1 0.2 GO:0090547 response to low humidity(GO:0090547)
0.1 0.3 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.1 1.6 GO:0010274 hydrotropism(GO:0010274)
0.1 0.6 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.1 0.3 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.1 1.6 GO:0048766 root hair initiation(GO:0048766)
0.1 0.7 GO:0010148 transpiration(GO:0010148)
0.1 0.3 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.1 0.5 GO:0090030 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.1 0.6 GO:0097502 mannosylation(GO:0097502)
0.1 0.3 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 0.4 GO:0032889 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144)
0.1 0.9 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 0.8 GO:0016045 detection of bacterium(GO:0016045)
0.1 5.0 GO:0010043 response to zinc ion(GO:0010043)
0.1 0.3 GO:0090435 protein localization to nuclear envelope(GO:0090435)
0.1 0.2 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.1 0.7 GO:1904481 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.1 0.4 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.1 1.0 GO:0010358 leaf shaping(GO:0010358)
0.1 0.5 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.9 GO:0010232 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.1 0.8 GO:0006085 acetyl-CoA biosynthetic process(GO:0006085)
0.1 0.7 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.1 0.2 GO:0009663 plasmodesma organization(GO:0009663)
0.1 0.3 GO:0032979 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.1 0.5 GO:1902969 mitotic DNA replication(GO:1902969)
0.1 0.4 GO:0007043 cell-cell junction assembly(GO:0007043)
0.1 0.4 GO:0009305 protein biotinylation(GO:0009305)
0.1 0.4 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.1 0.4 GO:0031297 replication fork processing(GO:0031297)
0.1 0.9 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.1 1.1 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.1 1.3 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.1 0.3 GO:0006423 cysteinyl-tRNA aminoacylation(GO:0006423)
0.1 0.3 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.1 0.3 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.1 0.5 GO:0009662 etioplast organization(GO:0009662)
0.1 0.3 GO:0051175 negative regulation of ethylene biosynthetic process(GO:0010366) negative regulation of sulfur amino acid metabolic process(GO:0031336) negative regulation of cellular amine metabolic process(GO:0033239) negative regulation of cellular amino acid metabolic process(GO:0045763) negative regulation of sulfur metabolic process(GO:0051175) negative regulation of olefin metabolic process(GO:1900909) negative regulation of olefin biosynthetic process(GO:1900912)
0.1 0.2 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.1 0.7 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 1.0 GO:0017157 regulation of exocytosis(GO:0017157)
0.1 0.3 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.1 0.2 GO:0051703 pollen tube reception(GO:0010483) intraspecies interaction between organisms(GO:0051703)
0.1 0.3 GO:0080168 abscisic acid transport(GO:0080168)
0.1 0.2 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.1 0.5 GO:0031572 mitotic G2 DNA damage checkpoint(GO:0007095) G2 DNA damage checkpoint(GO:0031572)
0.1 0.3 GO:0046825 regulation of protein export from nucleus(GO:0046825)
0.1 0.3 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.1 0.4 GO:0051189 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.1 1.1 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 0.2 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.5 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.1 0.6 GO:0044209 AMP salvage(GO:0044209)
0.1 0.2 GO:1900111 positive regulation of histone H3-K9 methylation(GO:0051574) positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.1 0.5 GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.1 0.4 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.1 0.2 GO:0018196 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.1 0.8 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.1 1.1 GO:0015770 sucrose transport(GO:0015770)
0.1 0.4 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.1 GO:0010971 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.1 0.2 GO:0016237 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.1 0.3 GO:0009660 amyloplast organization(GO:0009660)
0.1 0.5 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.1 0.5 GO:0006552 leucine catabolic process(GO:0006552)
0.1 0.3 GO:1904356 regulation of telomere maintenance via telomerase(GO:0032210) regulation of telomere maintenance via telomere lengthening(GO:1904356) negative regulation of DNA biosynthetic process(GO:2000279)
0.1 0.3 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.1 0.3 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.1 0.3 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.1 0.3 GO:0010731 protein glutathionylation(GO:0010731)
0.1 0.4 GO:0043100 pyrimidine nucleobase salvage(GO:0043100)
0.1 0.2 GO:2000278 regulation of telomerase activity(GO:0051972) positive regulation of telomerase activity(GO:0051973) regulation of DNA biosynthetic process(GO:2000278) positive regulation of DNA biosynthetic process(GO:2000573)
0.1 0.3 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 0.1 GO:0050000 chromosome localization(GO:0050000)
0.1 0.2 GO:0000965 mitochondrial RNA 3'-end processing(GO:0000965)
0.1 0.2 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.1 1.2 GO:0055075 potassium ion homeostasis(GO:0055075)
0.1 0.3 GO:0046713 borate transport(GO:0046713)
0.1 1.9 GO:0006094 gluconeogenesis(GO:0006094)
0.1 0.7 GO:0030308 negative regulation of cell growth(GO:0030308)
0.1 0.3 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 0.2 GO:0009093 cysteine catabolic process(GO:0009093)
0.1 0.2 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.1 0.1 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.1 0.5 GO:0009554 megasporogenesis(GO:0009554)
0.1 0.2 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.1 0.5 GO:0000478 endonucleolytic cleavage involved in rRNA processing(GO:0000478)
0.1 0.2 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.1 1.0 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.1 0.5 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.5 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.1 0.2 GO:0015840 urea transport(GO:0015840)
0.1 0.9 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.1 1.0 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 0.2 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.1 0.2 GO:0071219 cellular response to molecule of bacterial origin(GO:0071219)
0.1 0.2 GO:0033306 phytol metabolic process(GO:0033306) fatty alcohol metabolic process(GO:1903173)
0.1 0.3 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
0.1 1.4 GO:0006730 one-carbon metabolic process(GO:0006730)
0.1 0.1 GO:0051447 negative regulation of meiotic nuclear division(GO:0045835) negative regulation of meiotic cell cycle(GO:0051447)
0.1 0.2 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.1 0.7 GO:0006241 CTP biosynthetic process(GO:0006241) pyrimidine ribonucleoside triphosphate metabolic process(GO:0009208) pyrimidine ribonucleoside triphosphate biosynthetic process(GO:0009209) CTP metabolic process(GO:0046036)
0.1 0.3 GO:0080009 mRNA methylation(GO:0080009)
0.1 0.2 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 0.4 GO:0045898 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.1 0.2 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.1 0.5 GO:1990937 xylan acetylation(GO:1990937)
0.1 0.4 GO:0019079 viral genome replication(GO:0019079)
0.1 0.8 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.1 0.3 GO:0034504 protein localization to nucleus(GO:0034504)
0.1 0.3 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 0.2 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.1 0.2 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.1 0.5 GO:0070534 protein K63-linked ubiquitination(GO:0070534)
0.1 0.5 GO:0006301 postreplication repair(GO:0006301)
0.1 0.8 GO:1902074 response to salt(GO:1902074)
0.0 1.1 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.3 GO:0043650 dicarboxylic acid biosynthetic process(GO:0043650)
0.0 0.1 GO:0043132 NAD transport(GO:0043132)
0.0 0.2 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.0 0.2 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.0 0.5 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 1.0 GO:0051781 positive regulation of cell division(GO:0051781)
0.0 0.6 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.2 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.0 1.2 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.2 GO:0010683 tricyclic triterpenoid metabolic process(GO:0010683)
0.0 0.3 GO:0031335 regulation of ethylene biosynthetic process(GO:0010364) regulation of sulfur amino acid metabolic process(GO:0031335) regulation of olefin metabolic process(GO:1900908) regulation of olefin biosynthetic process(GO:1900911)
0.0 0.1 GO:0042256 mature ribosome assembly(GO:0042256)
0.0 0.6 GO:0050665 hydrogen peroxide biosynthetic process(GO:0050665)
0.0 1.9 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.7 GO:0006270 DNA replication initiation(GO:0006270)
0.0 0.7 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 1.3 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.1 GO:2000011 regulation of adaxial/abaxial pattern formation(GO:2000011)
0.0 0.4 GO:0007021 tubulin complex assembly(GO:0007021)
0.0 0.1 GO:0097056 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.0 0.1 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.0 0.9 GO:0019344 cysteine biosynthetic process(GO:0019344)
0.0 1.2 GO:0010252 auxin homeostasis(GO:0010252)
0.0 0.8 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.2 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.0 0.7 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.2 GO:0009557 antipodal cell differentiation(GO:0009557)
0.0 0.5 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.1 GO:0071046 polyadenylation-dependent RNA catabolic process(GO:0043633) polyadenylation-dependent ncRNA catabolic process(GO:0043634) nuclear ncRNA surveillance(GO:0071029) nuclear polyadenylation-dependent rRNA catabolic process(GO:0071035) nuclear polyadenylation-dependent ncRNA catabolic process(GO:0071046)
0.0 1.2 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.5 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.5 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.2 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.0 0.2 GO:0080117 secondary growth(GO:0080117)
0.0 2.5 GO:0048767 root hair elongation(GO:0048767)
0.0 0.4 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.0 0.4 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.0 0.9 GO:0009269 response to desiccation(GO:0009269)
0.0 0.2 GO:1901562 response to paraquat(GO:1901562)
0.0 0.0 GO:0042148 DNA recombinase assembly(GO:0000730) strand invasion(GO:0042148)
0.0 0.4 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.0 0.2 GO:0000719 photoreactive repair(GO:0000719)
0.0 0.2 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.0 1.4 GO:0010054 trichoblast differentiation(GO:0010054)
0.0 0.4 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.2 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.0 0.4 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.0 0.8 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.1 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.0 0.4 GO:0043966 histone H3 acetylation(GO:0043966)
0.0 0.5 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.0 0.1 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.0 1.6 GO:0009407 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.4 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.0 0.2 GO:1901006 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.0 0.3 GO:0061727 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 0.2 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.0 0.2 GO:0060261 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.0 0.1 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.0 0.2 GO:0016444 somatic cell DNA recombination(GO:0016444)
0.0 0.3 GO:0030104 water homeostasis(GO:0030104)
0.0 0.2 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.0 0.1 GO:0044090 positive regulation of vacuole organization(GO:0044090)
0.0 0.2 GO:0044375 regulation of peroxisome size(GO:0044375)
0.0 0.3 GO:0031125 rRNA 3'-end processing(GO:0031125)
0.0 0.4 GO:0006826 iron ion transport(GO:0006826)
0.0 0.1 GO:0009865 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.0 0.3 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.0 0.1 GO:0051031 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.0 0.2 GO:0018874 benzoate metabolic process(GO:0018874)
0.0 0.4 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.0 0.4 GO:0016073 snRNA metabolic process(GO:0016073)
0.0 0.1 GO:0098581 detection of biotic stimulus(GO:0009595) detection of molecule of fungal origin(GO:0032491) detection of external biotic stimulus(GO:0098581)
0.0 0.2 GO:0048575 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.0 0.1 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.7 GO:0009638 phototropism(GO:0009638)
0.0 0.1 GO:1902446 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.0 0.1 GO:0010018 far-red light signaling pathway(GO:0010018) cellular response to far red light(GO:0071490)
0.0 0.3 GO:0009088 threonine biosynthetic process(GO:0009088)
0.0 0.5 GO:0055070 copper ion homeostasis(GO:0055070)
0.0 0.1 GO:0080093 regulation of photorespiration(GO:0080093)
0.0 0.7 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.0 GO:0048469 cell maturation(GO:0048469)
0.0 0.4 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.1 GO:0048462 carpel formation(GO:0048462)
0.0 0.3 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.1 GO:1990069 stomatal opening(GO:1990069)
0.0 0.5 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 2.1 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 0.2 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 1.6 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.1 GO:0080051 cutin transport(GO:0080051)
0.0 0.1 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.0 0.2 GO:0080183 response to photooxidative stress(GO:0080183)
0.0 0.1 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.0 0.1 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.0 0.2 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0 0.3 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 0.1 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
0.0 0.1 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 0.2 GO:0010088 phloem development(GO:0010088)
0.0 1.0 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.1 GO:0071480 cellular response to gamma radiation(GO:0071480)
0.0 0.2 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.0 0.1 GO:0048832 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.0 0.1 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.1 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.4 GO:0032365 intracellular lipid transport(GO:0032365)
0.0 0.6 GO:0042026 protein refolding(GO:0042026)
0.0 0.3 GO:0015914 phospholipid transport(GO:0015914)
0.0 0.1 GO:1901998 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891) toxin transport(GO:1901998)
0.0 0.2 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.0 0.2 GO:0030641 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.0 0.4 GO:0010214 seed coat development(GO:0010214)
0.0 0.1 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.0 0.1 GO:0051016 negative regulation of actin filament depolymerization(GO:0030835) negative regulation of protein complex disassembly(GO:0043242) barbed-end actin filament capping(GO:0051016) actin filament capping(GO:0051693) negative regulation of protein depolymerization(GO:1901880)
0.0 0.6 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.0 0.1 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.2 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.0 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.0 0.1 GO:0009113 purine nucleobase biosynthetic process(GO:0009113)
0.0 0.1 GO:0006998 nuclear envelope organization(GO:0006998) nuclear envelope reassembly(GO:0031468)
0.0 0.2 GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.0 0.1 GO:0070127 tRNA aminoacylation for mitochondrial protein translation(GO:0070127)
0.0 1.3 GO:0009561 megagametogenesis(GO:0009561)
0.0 0.2 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.0 0.1 GO:0030031 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.0 0.1 GO:0009304 tRNA transcription(GO:0009304)
0.0 2.8 GO:0009845 seed germination(GO:0009845)
0.0 0.1 GO:0019740 regulation of nitrogen utilization(GO:0006808) nitrogen utilization(GO:0019740)
0.0 0.1 GO:0043489 RNA stabilization(GO:0043489)
0.0 0.5 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.3 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.2 GO:0000919 cell plate assembly(GO:0000919)
0.0 1.4 GO:0016125 sterol metabolic process(GO:0016125)
0.0 0.4 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.0 0.1 GO:0080060 integument development(GO:0080060)
0.0 0.2 GO:0042128 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.0 0.9 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.0 0.1 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.0 0.2 GO:0017183 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.2 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.0 0.1 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.4 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.6 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.1 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.4 GO:0007030 Golgi organization(GO:0007030)
0.0 0.6 GO:0046939 nucleotide phosphorylation(GO:0046939)
0.0 0.5 GO:0051170 nuclear import(GO:0051170)
0.0 0.1 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.0 0.1 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.0 0.1 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.0 0.2 GO:0046785 microtubule polymerization(GO:0046785)
0.0 0.2 GO:0051814 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.3 GO:0009825 multidimensional cell growth(GO:0009825)
0.0 0.2 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 0.2 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.2 GO:0006833 water transport(GO:0006833) fluid transport(GO:0042044)
0.0 0.3 GO:0009958 positive gravitropism(GO:0009958)
0.0 0.2 GO:0009231 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.0 0.0 GO:0015918 sterol transport(GO:0015918)
0.0 0.1 GO:0034762 regulation of transmembrane transport(GO:0034762)
0.0 0.3 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.4 GO:1900674 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 0.0 GO:0030100 regulation of endocytosis(GO:0030100)
0.0 0.1 GO:0006290 pyrimidine dimer repair(GO:0006290)
0.0 0.7 GO:0009631 cold acclimation(GO:0009631)
0.0 0.0 GO:0006072 glycerol-3-phosphate metabolic process(GO:0006072)
0.0 0.2 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.0 0.1 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 0.1 GO:0006828 manganese ion transport(GO:0006828)
0.0 0.4 GO:0032880 regulation of protein localization(GO:0032880)
0.0 0.2 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.1 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.2 GO:0001522 pseudouridine synthesis(GO:0001522)
0.0 0.2 GO:0031167 rRNA methylation(GO:0031167)
0.0 0.6 GO:0070585 protein targeting to mitochondrion(GO:0006626) protein localization to mitochondrion(GO:0070585) establishment of protein localization to mitochondrion(GO:0072655)
0.0 0.2 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.0 0.3 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.3 GO:0000959 mitochondrial RNA metabolic process(GO:0000959)
0.0 0.2 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.2 GO:0010152 pollen maturation(GO:0010152)
0.0 0.7 GO:0042176 regulation of protein catabolic process(GO:0042176)
0.0 0.9 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.5 GO:0006414 translational elongation(GO:0006414)
0.0 2.2 GO:0010498 proteasomal protein catabolic process(GO:0010498) proteasome-mediated ubiquitin-dependent protein catabolic process(GO:0043161)
0.0 0.1 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.1 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.0 0.0 GO:0048451 petal formation(GO:0048451)
0.0 0.3 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.2 GO:0046688 response to copper ion(GO:0046688)
0.0 0.2 GO:0019853 L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.3 GO:0006862 nucleotide transport(GO:0006862)
0.0 0.4 GO:0048825 cotyledon development(GO:0048825)
0.0 0.3 GO:0030244 cellulose biosynthetic process(GO:0030244)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.6 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.2 1.0 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.2 0.6 GO:0016328 lateral plasma membrane(GO:0016328)
0.2 1.1 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.2 0.5 GO:0009514 glyoxysome(GO:0009514)
0.1 0.4 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.1 0.8 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.1 0.4 GO:0036387 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.1 0.5 GO:0000783 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.1 0.8 GO:0009346 citrate lyase complex(GO:0009346)
0.1 0.4 GO:0030689 Noc complex(GO:0030689)
0.1 0.5 GO:0042788 polysomal ribosome(GO:0042788)
0.1 0.9 GO:0005784 Sec61 translocon complex(GO:0005784)
0.1 0.5 GO:0034515 proteasome storage granule(GO:0034515)
0.1 0.4 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.1 0.3 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.1 0.4 GO:0031429 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.1 1.0 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 0.4 GO:0018444 translation release factor complex(GO:0018444)
0.1 0.5 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.1 0.9 GO:0042555 MCM complex(GO:0042555)
0.1 0.8 GO:0017119 Golgi transport complex(GO:0017119)
0.1 0.2 GO:0044426 cell wall part(GO:0044426) external encapsulating structure part(GO:0044462)
0.1 1.0 GO:0045298 tubulin complex(GO:0045298)
0.1 0.7 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.1 0.4 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.1 0.5 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.1 0.3 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.1 1.2 GO:0009531 secondary cell wall(GO:0009531)
0.1 0.3 GO:0000836 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.1 0.7 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.1 0.2 GO:0010330 cellulose synthase complex(GO:0010330)
0.1 0.2 GO:0042721 mitochondrial inner membrane protein insertion complex(GO:0042721)
0.1 0.9 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.1 0.8 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.1 0.5 GO:0035861 site of double-strand break(GO:0035861)
0.1 0.5 GO:0031209 SCAR complex(GO:0031209)
0.1 0.2 GO:0032045 guanyl-nucleotide exchange factor complex(GO:0032045)
0.1 0.5 GO:0010168 ER body(GO:0010168)
0.0 0.6 GO:0005839 proteasome core complex(GO:0005839) proteasome core complex, beta-subunit complex(GO:0019774)
0.0 0.2 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.4 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.0 1.0 GO:0031351 intrinsic component of plastid membrane(GO:0031350) integral component of plastid membrane(GO:0031351)
0.0 0.9 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.4 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0 0.4 GO:0016272 prefoldin complex(GO:0016272)
0.0 3.8 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.5 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.2 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 0.8 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 1.6 GO:0005764 lysosome(GO:0005764)
0.0 0.3 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.4 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.0 0.3 GO:0034518 RNA cap binding complex(GO:0034518)
0.0 0.1 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.0 0.6 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.3 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 1.9 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 5.5 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.2 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 0.5 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 0.8 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.0 0.2 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 3.2 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.4 GO:0045257 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.0 0.5 GO:0009986 cell surface(GO:0009986)
0.0 0.9 GO:0005643 nuclear pore(GO:0005643)
0.0 0.2 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 1.7 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.1 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.0 0.3 GO:0030131 clathrin adaptor complex(GO:0030131)
0.0 0.3 GO:0008180 COP9 signalosome(GO:0008180)
0.0 0.2 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 0.4 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.0 0.2 GO:0051233 spindle midzone(GO:0051233)
0.0 11.5 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.1 GO:0030141 secretory granule(GO:0030141)
0.0 0.1 GO:0016461 unconventional myosin complex(GO:0016461)
0.0 0.8 GO:1903293 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 0.3 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.2 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.0 0.3 GO:0044450 microtubule organizing center part(GO:0044450)
0.0 0.3 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.0 0.7 GO:0009504 cell plate(GO:0009504)
0.0 0.6 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.8 GO:0000145 exocyst(GO:0000145)
0.0 0.1 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.0 2.7 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.2 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 2.1 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.1 GO:0017053 transcriptional repressor complex(GO:0017053)
0.0 0.3 GO:0005769 early endosome(GO:0005769)
0.0 0.3 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 0.1 GO:0032301 MutSalpha complex(GO:0032301)
0.0 0.1 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.0 0.2 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.0 0.5 GO:0000502 proteasome complex(GO:0000502)
0.0 0.1 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.0 3.2 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.2 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 14.0 GO:0005794 Golgi apparatus(GO:0005794)
0.0 0.4 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.1 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.4 GO:0005746 mitochondrial respiratory chain(GO:0005746)
0.0 0.4 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.1 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.0 0.1 GO:0035619 root hair tip(GO:0035619)
0.0 0.1 GO:0000124 SAGA complex(GO:0000124)
0.0 0.2 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.9 GO:0044421 extracellular region part(GO:0044421)
0.0 0.2 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.1 GO:0010445 nuclear dicing body(GO:0010445)
0.0 0.1 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 0.2 GO:0031304 intrinsic component of mitochondrial inner membrane(GO:0031304)
0.0 0.1 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 0.1 GO:0089701 U2AF(GO:0089701)
0.0 0.1 GO:0000796 condensin complex(GO:0000796)
0.0 0.2 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.2 GO:0015935 small ribosomal subunit(GO:0015935)
0.0 0.0 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.0 0.1 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.2 GO:0071013 catalytic step 2 spliceosome(GO:0071013)
0.0 0.1 GO:0043596 nuclear replication fork(GO:0043596)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.0 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.4 3.5 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.4 1.5 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.3 1.2 GO:0004556 alpha-amylase activity(GO:0004556)
0.3 1.3 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.2 1.2 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.2 1.2 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.2 1.5 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.2 1.0 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.2 0.6 GO:0009374 biotin binding(GO:0009374)
0.2 1.5 GO:0009916 alternative oxidase activity(GO:0009916)
0.2 0.7 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.2 0.5 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.2 0.5 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.2 0.7 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.2 2.4 GO:0004312 fatty acid synthase activity(GO:0004312)
0.2 0.5 GO:0000403 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.1 0.4 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.1 0.9 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.1 2.8 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.1 1.5 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 0.4 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.1 0.6 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.1 0.7 GO:0004001 adenosine kinase activity(GO:0004001)
0.1 0.4 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.1 0.4 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.1 0.4 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.1 0.4 GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.1 0.4 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.1 0.5 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.1 2.9 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 1.4 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.1 0.8 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.1 1.0 GO:0001653 peptide receptor activity(GO:0001653)
0.1 0.4 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.1 0.4 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.1 0.5 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.1 0.7 GO:0019904 protein domain specific binding(GO:0019904)
0.1 0.3 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.1 2.2 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 0.3 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.1 0.8 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 0.8 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.1 0.5 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.1 0.3 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.1 1.1 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 1.3 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 0.5 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.1 0.4 GO:0097617 annealing activity(GO:0097617)
0.1 0.6 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.1 0.3 GO:0003856 3-dehydroquinate synthase activity(GO:0003856)
0.1 0.7 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.5 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.1 0.5 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 0.3 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.1 0.4 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.1 0.3 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.1 0.5 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.1 0.7 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 1.1 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 2.7 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.1 0.1 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.1 0.4 GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity(GO:0004077) biotin-protein ligase activity(GO:0018271)
0.1 0.3 GO:0010521 telomerase inhibitor activity(GO:0010521)
0.1 1.1 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.1 0.4 GO:0000014 single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.1 0.3 GO:0004817 cysteine-tRNA ligase activity(GO:0004817)
0.1 0.3 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 0.5 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.2 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.1 0.2 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 1.7 GO:0016411 acylglycerol O-acyltransferase activity(GO:0016411)
0.1 0.3 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.1 0.5 GO:0003985 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.1 0.7 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 0.3 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.1 0.2 GO:0005034 osmosensor activity(GO:0005034) cytokinin receptor activity(GO:0009884)
0.1 0.8 GO:0010485 H4 histone acetyltransferase activity(GO:0010485)
0.1 0.5 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.1 0.5 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.1 1.1 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.1 0.6 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.3 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 0.5 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.1 0.3 GO:0046592 polyamine oxidase activity(GO:0046592)
0.1 0.5 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.4 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 0.4 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 0.4 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.3 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.1 0.4 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.1 0.3 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.1 1.0 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.1 0.3 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.1 0.3 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.1 0.2 GO:0051010 microtubule plus-end binding(GO:0051010)
0.1 0.7 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.1 0.2 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1 0.7 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 0.2 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.1 0.4 GO:0004739 pyruvate dehydrogenase activity(GO:0004738) pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.1 0.4 GO:0004834 tryptophan synthase activity(GO:0004834)
0.1 0.8 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.1 0.2 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.1 0.1 GO:0016841 ammonia-lyase activity(GO:0016841)
0.1 0.2 GO:0050377 dTDP-glucose 4,6-dehydratase activity(GO:0008460) UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.1 0.3 GO:0015120 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.1 0.5 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.1 0.2 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.1 0.3 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 0.2 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.1 0.7 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 0.6 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.1 0.3 GO:0000150 recombinase activity(GO:0000150)
0.1 0.6 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.1 0.4 GO:0052852 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.1 0.4 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.1 0.9 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.3 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.0 0.3 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.5 GO:0005319 lipid transporter activity(GO:0005319)
0.0 0.2 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 0.1 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.0 0.2 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.0 0.9 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.1 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.0 0.2 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 0.2 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 0.3 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.0 0.2 GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds(GO:0016863)
0.0 0.2 GO:0005223 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) intracellular cGMP activated cation channel activity(GO:0005223) cyclic nucleotide-gated ion channel activity(GO:0043855)
0.0 0.1 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.0 0.3 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.0 0.4 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.1 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.0 0.5 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 0.3 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.0 1.1 GO:0004568 chitinase activity(GO:0004568)
0.0 0.3 GO:0010011 auxin binding(GO:0010011)
0.0 0.3 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.2 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.0 0.4 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.1 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.0 0.5 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0 0.6 GO:0008536 Ran GTPase binding(GO:0008536)
0.0 0.1 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.0 0.8 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.2 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.3 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.0 1.4 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.2 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.0 0.1 GO:0016971 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.0 0.4 GO:0036442 hydrogen-exporting ATPase activity(GO:0036442) ATPase activity, coupled to transmembrane movement of ions, rotational mechanism(GO:0044769)
0.0 0.2 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.0 0.2 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.6 GO:0015175 neutral amino acid transmembrane transporter activity(GO:0015175)
0.0 0.1 GO:0071617 lysophospholipid acyltransferase activity(GO:0071617)
0.0 0.8 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.8 GO:0008143 poly(A) binding(GO:0008143)
0.0 0.2 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)
0.0 0.1 GO:0008481 sphinganine kinase activity(GO:0008481)
0.0 0.7 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.5 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.2 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.2 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.0 1.2 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.3 GO:0035198 miRNA binding(GO:0035198)
0.0 0.1 GO:0042392 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.0 0.5 GO:0031420 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.2 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.0 1.2 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.0 0.4 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.0 0.6 GO:0016157 sucrose synthase activity(GO:0016157)
0.0 0.2 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.0 0.4 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.1 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.0 0.3 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 0.8 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.5 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.3 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.2 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.0 2.2 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.3 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 0.3 GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.0 0.2 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 0.3 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.6 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.0 0.5 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.0 0.6 GO:0016844 strictosidine synthase activity(GO:0016844)
0.0 0.7 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 0.2 GO:0043765 T/G mismatch-specific endonuclease activity(GO:0043765)
0.0 0.3 GO:0019202 amino acid kinase activity(GO:0019202)
0.0 0.1 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.0 0.5 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.1 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.0 0.5 GO:0051117 ATPase binding(GO:0051117)
0.0 0.1 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.0 0.3 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.1 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.0 1.7 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.3 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.0 0.1 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.0 1.2 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.4 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 1.1 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.4 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.2 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.1 GO:0000339 RNA cap binding(GO:0000339)
0.0 0.1 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 0.6 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.1 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.0 0.1 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.0 0.2 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 0.3 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.5 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 3.4 GO:0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances(GO:0016820) ATPase activity, coupled to transmembrane movement of substances(GO:0042626) ATPase activity, coupled to movement of substances(GO:0043492)
0.0 0.7 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 1.9 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.4 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.5 GO:0019902 phosphatase binding(GO:0019902)
0.0 0.9 GO:0005048 signal sequence binding(GO:0005048)
0.0 0.2 GO:0030332 cyclin binding(GO:0030332)
0.0 1.3 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.2 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 1.3 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.1 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.0 0.3 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.1 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.0 0.3 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.0 0.1 GO:0004385 guanylate kinase activity(GO:0004385)
0.0 1.5 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.1 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.0 0.2 GO:0048038 quinone binding(GO:0048038)
0.0 0.4 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.0 0.8 GO:0046915 transition metal ion transmembrane transporter activity(GO:0046915)
0.0 0.1 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.0 3.2 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 0.1 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.0 0.6 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.3 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.2 GO:0008318 protein prenyltransferase activity(GO:0008318)
0.0 0.1 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.3 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.1 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.2 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.3 GO:0004124 cysteine synthase activity(GO:0004124)
0.0 0.5 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.0 0.4 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.1 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.1 GO:0032143 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.0 0.1 GO:0070034 telomerase RNA binding(GO:0070034)
0.0 0.3 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 0.6 GO:0005496 steroid binding(GO:0005496)
0.0 0.1 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.1 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.2 GO:0016160 amylase activity(GO:0016160) beta-amylase activity(GO:0016161)
0.0 0.5 GO:0016597 amino acid binding(GO:0016597)
0.0 0.2 GO:0060090 binding, bridging(GO:0060090)
0.0 0.1 GO:0001671 ATPase activator activity(GO:0001671)
0.0 2.4 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.8 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.3 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.0 0.0 GO:0019789 SUMO transferase activity(GO:0019789)
0.0 0.1 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.1 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.0 0.3 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 0.2 GO:0004532 3'-5'-exoribonuclease activity(GO:0000175) exoribonuclease activity(GO:0004532) exoribonuclease activity, producing 5'-phosphomonoesters(GO:0016896)
0.0 0.1 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.1 GO:0004766 spermidine synthase activity(GO:0004766)
0.0 0.1 GO:0043424 protein histidine kinase binding(GO:0043424)
0.0 0.2 GO:0008235 metalloexopeptidase activity(GO:0008235)
0.0 0.1 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.0 0.1 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.0 0.3 GO:0022843 voltage-gated cation channel activity(GO:0022843)
0.0 0.1 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.0 0.1 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.3 GO:0070628 proteasome binding(GO:0070628)
0.0 3.6 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 2.8 GO:0003924 GTPase activity(GO:0003924)
0.0 0.0 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.0 0.1 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.0 0.7 GO:0005346 purine ribonucleotide transmembrane transporter activity(GO:0005346)
0.0 0.3 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.2 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 0.2 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.6 GO:0043130 ubiquitin binding(GO:0043130)
0.0 0.7 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.0 0.1 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.1 GO:0008199 ferric iron binding(GO:0008199)
0.0 0.7 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.1 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 0.0 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.0 0.3 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 1.3 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.4 GO:0019901 protein kinase binding(GO:0019901)
0.0 0.2 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.1 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 0.1 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 0.1 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 0.2 GO:0019905 syntaxin binding(GO:0019905)
0.0 0.1 GO:0004467 long-chain fatty acid-CoA ligase activity(GO:0004467)
0.0 0.3 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.2 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.2 1.5 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.1 0.4 ST ADRENERGIC Adrenergic Pathway
0.1 0.4 SIG CHEMOTAXIS Genes related to chemotaxis
0.1 0.5 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.1 0.4 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.1 0.2 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.1 0.6 PID NOTCH PATHWAY Notch signaling pathway
0.1 0.2 ST B CELL ANTIGEN RECEPTOR B Cell Antigen Receptor
0.1 0.1 PID AJDISS 2PATHWAY Posttranslational regulation of adherens junction stability and dissassembly
0.1 0.5 PID MET PATHWAY Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met)
0.1 0.3 PID MTOR 4PATHWAY mTOR signaling pathway
0.1 0.7 PID ATR PATHWAY ATR signaling pathway
0.1 0.2 PID HIV NEF PATHWAY HIV-1 Nef: Negative effector of Fas and TNF-alpha
0.1 0.2 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.2 PID VEGFR1 PATHWAY VEGFR1 specific signals
0.1 0.4 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.0 0.1 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.0 0.2 PID PLK1 PATHWAY PLK1 signaling events
0.0 0.1 PID IL12 2PATHWAY IL12-mediated signaling events
0.0 0.1 PID INTEGRIN A4B1 PATHWAY Alpha4 beta1 integrin signaling events
0.0 0.1 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.0 0.1 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.0 0.1 PID A6B1 A6B4 INTEGRIN PATHWAY a6b1 and a6b4 Integrin signaling
0.0 0.1 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.0 0.1 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 0.1 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.0 0.1 PID E2F PATHWAY E2F transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 REACTOME GAB1 SIGNALOSOME Genes involved in GAB1 signalosome
0.2 0.5 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 0.5 REACTOME TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRONLESS TRANSCRIPT Genes involved in Transport of Mature mRNA Derived from an Intronless Transcript
0.1 0.4 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.1 0.4 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.1 0.8 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.1 0.4 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1 0.4 REACTOME CELL DEATH SIGNALLING VIA NRAGE NRIF AND NADE Genes involved in Cell death signalling via NRAGE, NRIF and NADE
0.1 0.3 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.1 0.6 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.1 0.4 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.3 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.1 0.4 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.1 0.2 REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION Genes involved in Cyclin E associated events during G1/S transition
0.1 0.2 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.0 0.2 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.0 0.7 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.2 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.0 0.1 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.0 0.1 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.0 0.3 REACTOME G ALPHA I SIGNALLING EVENTS Genes involved in G alpha (i) signalling events
0.0 0.1 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.0 0.1 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.0 0.1 REACTOME INTEGRIN CELL SURFACE INTERACTIONS Genes involved in Integrin cell surface interactions
0.0 0.1 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.0 0.1 REACTOME EXTENSION OF TELOMERES Genes involved in Extension of Telomeres