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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT3G15170

Z-value: 0.77

Transcription factors associated with AT3G15170

Gene Symbol Gene ID Gene Info
AT3G15170
AT3G15170 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
CUC1arTal_v1_Chr3_+_5109782_51097820.117.0e-01Click!

Activity profile of AT3G15170 motif

Sorted Z-values of AT3G15170 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_-_21992812_21992814 1.51 AT5G54190.2
AT5G54190.1
PORA
protochlorophyllide oxidoreductase A
arTal_v1_Chr1_+_18546086_18546165 1.43 AT1G50050.2
AT1G50050.1
AT1G50050
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
arTal_v1_Chr1_-_10475969_10475969 0.99 AT1G29920.1
CAB2
chlorophyll A/B-binding protein 2
arTal_v1_Chr5_-_8406132_8406151 0.97 AT5G24570.1
AT5G24575.1
AT5G24570
AT5G24575
hypothetical protein
hypothetical protein
arTal_v1_Chr1_-_9275193_9275193 0.96 AT1G26790.1
AT1G26790
Dof-type zinc finger DNA-binding family protein
arTal_v1_Chr3_+_15983199_15983199 0.92 AT3G44300.1
NIT2
nitrilase 2
arTal_v1_Chr2_-_12343443_12343443 0.83 AT2G28780.1
AT2G28780
P-hydroxybenzoic acid efflux pump subunit
arTal_v1_Chr2_+_6893949_6893949 0.80 AT2G15830.1
AT2G15830
hypothetical protein
arTal_v1_Chr4_+_13725546_13725546 0.79 AT4G27440.2
AT4G27440.1
PORB
protochlorophyllide oxidoreductase B
arTal_v1_Chr5_-_17626487_17626487 0.73 AT5G43840.1
HSFA6A
heat shock transcription factor A6A
arTal_v1_Chr1_-_27340044_27340044 0.67 AT1G72610.1
GER1
germin-like protein 1
arTal_v1_Chr5_+_2657054_2657054 0.63 AT5G08260.1
scpl35
serine carboxypeptidase-like 35
arTal_v1_Chr2_+_16079679_16079679 0.63 AT2G38390.1
AT2G38390
Peroxidase superfamily protein
arTal_v1_Chr4_-_18472048_18472048 0.62 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
arTal_v1_Chr5_-_15201168_15201197 0.62 AT5G38100.4
AT5G38100.1
AT5G38100.2
AT5G38100
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr2_-_8088302_8088302 0.61 AT2G18650.1
MEE16
RING/U-box superfamily protein
arTal_v1_Chr5_-_18189523_18189523 0.58 AT5G45070.1
PP2-A8
phloem protein 2-A8
arTal_v1_Chr4_+_8827600_8827710 0.58 AT4G15430.2
AT4G15430.1
AT4G15430
ERD (early-responsive to dehydration stress) family protein
arTal_v1_Chr1_+_18138169_18138169 0.57 AT1G49032.2
AT1G49032
hypothetical protein
arTal_v1_Chr1_+_12851983_12851983 0.56 AT1G35140.1
PHI-1
Phosphate-responsive 1 family protein
arTal_v1_Chr5_+_25248690_25248690 0.56 AT5G62900.1
AT5G62900
basic-leucine zipper transcription factor K
arTal_v1_Chr4_-_6976014_6976014 0.54 AT4G11485.1
LCR11
low-molecular-weight cysteine-rich 11
arTal_v1_Chr3_-_7101637_7101637 0.53 AT3G20360.1
AT3G20360
TRAF-like family protein
arTal_v1_Chr1_+_18137977_18137977 0.53 AT1G49032.1
AT1G49032
hypothetical protein
arTal_v1_Chr2_-_19361162_19361162 0.53 AT2G47160.2
BOR1
HCO3- transporter family
arTal_v1_Chr3_+_7959753_7959753 0.53 AT3G22440.1
AT3G22440
FRIGIDA-like protein
arTal_v1_Chr2_-_19361328_19361328 0.53 AT2G47160.1
BOR1
HCO3- transporter family
arTal_v1_Chr3_-_2175686_2175771 0.52 AT3G06880.1
AT3G06880.5
AT3G06880.4
AT3G06880.3
AT3G06880.2
AT3G06880
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr4_+_994726_994726 0.52 AT4G02280.1
SUS3
sucrose synthase 3
arTal_v1_Chr1_+_27538190_27538190 0.51 AT1G73220.1
OCT1
organic cation/carnitine transporter1
arTal_v1_Chr3_+_11810726_11810726 0.51 AT3G30180.1
BR6OX2
brassinosteroid-6-oxidase 2
arTal_v1_Chr5_+_23701392_23701392 0.49 AT5G58660.1
AT5G58660.2
AT5G58660
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr1_-_21630118_21630118 0.49 AT1G58300.1
HO4
heme oxygenase 4
arTal_v1_Chr5_+_18945543_18945543 0.47 AT5G46690.2
AT5G46690.1
bHLH071
beta HLH protein 71
arTal_v1_Chr1_+_24778257_24778257 0.47 AT1G66430.1
AT1G66430
pfkB-like carbohydrate kinase family protein
arTal_v1_Chr2_+_7198127_7198127 0.47 AT2G16595.1
AT2G16595
Translocon-associated protein (TRAP), alpha subunit
arTal_v1_Chr4_+_16653704_16653704 0.47 AT4G34970.1
ADF9
actin depolymerizing factor 9
arTal_v1_Chr5_+_23098872_23098872 0.46 AT5G57080.1
AT5G57080
transmembrane protein
arTal_v1_Chr4_-_2634917_2634917 0.46 AT4G05120.2
FUR1
Major facilitator superfamily protein
arTal_v1_Chr5_+_25233881_25233881 0.45 AT5G62865.1
AT5G62865
hypothetical protein
arTal_v1_Chr4_+_1412785_1412785 0.45 AT4G03205.2
AT4G03205.1
hemf2
Coproporphyrinogen III oxidase
arTal_v1_Chr5_+_6445245_6445245 0.45 AT5G19170.1
AT5G19170
NEP-interacting protein, putative (DUF239)
arTal_v1_Chr5_+_21943983_21943983 0.45 AT5G54070.1
HSFA9
heat shock transcription factor A9
arTal_v1_Chr5_-_19977620_19977620 0.45 AT5G49280.1
AT5G49280
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr2_+_12706627_12706627 0.44 AT2G29740.1
UGT71C2
UDP-glucosyl transferase 71C2
arTal_v1_Chr4_-_2635143_2635143 0.44 AT4G05120.1
FUR1
Major facilitator superfamily protein
arTal_v1_Chr5_-_21724642_21724701 0.44 AT5G53490.3
AT5G53490.2
AT5G53490.1
AT5G53490.4
AT5G53490
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_+_23381604_23381684 0.44 AT3G63290.1
AT3G63290.2
AT3G63290
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr4_+_4886962_4886962 0.44 AT4G08040.1
ACS11
1-aminocyclopropane-1-carboxylate synthase 11
arTal_v1_Chr1_-_10399873_10399873 0.44 AT1G29720.1
AT1G29720
Leucine-rich repeat transmembrane protein kinase
arTal_v1_Chr4_+_18576216_18576216 0.44 AT4G40070.1
AT4G40070
RING/U-box superfamily protein
arTal_v1_Chr1_-_17683629_17683719 0.44 AT1G47960.1
AT1G47960.2
C/VIF1
cell wall / vacuolar inhibitor of fructosidase 1
arTal_v1_Chr5_+_4898641_4898641 0.44 AT5G15120.1
AT5G15120
2-aminoethanethiol dioxygenase, putative (DUF1637)
arTal_v1_Chr2_-_12702443_12702443 0.43 AT2G29720.1
CTF2B
FAD/NAD(P)-binding oxidoreductase family protein
arTal_v1_Chr2_-_18321696_18321696 0.43 AT2G44360.1
AT2G44360
ecotropic viral integration site protein
arTal_v1_Chr5_+_15588623_15588723 0.43 AT5G38940.2
AT5G38940.1
AT5G38940
RmlC-like cupins superfamily protein
arTal_v1_Chr3_+_4729399_4729438 0.43 AT3G14210.1
AT3G14210.2
ESM1
GDSL-like lipase/acylhydrolase superfamily protein
arTal_v1_Chr5_-_24096532_24096532 0.42 AT5G59800.1
MBD7
methyl-CPG-binding domain 7
arTal_v1_Chr2_-_15797059_15797059 0.42 AT2G37660.1
AT2G37660
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_+_26122080_26122080 0.42 AT1G69490.1
NAP
NAC-like, activated by AP3/PI
arTal_v1_Chr1_+_26329863_26329863 0.42 AT1G69910.1
AT1G69910
Protein kinase superfamily protein
arTal_v1_Chr4_+_2189515_2189515 0.42 AT4G04410.1
AT4G04410

arTal_v1_Chr1_-_29518028_29518028 0.41 AT1G78450.1
AT1G78450
SOUL heme-binding family protein
arTal_v1_Chr4_-_7992429_7992429 0.41 AT4G13770.1
CYP83A1
cytochrome P450, family 83, subfamily A, polypeptide 1
arTal_v1_Chr2_+_14936565_14936565 0.41 AT2G35585.2
AT2G35585.1
AT2G35585
cystic fibrosis transmembrane conductance regulator
arTal_v1_Chr4_+_13177356_13177356 0.41 AT4G25960.1
ABCB2
P-glycoprotein 2
arTal_v1_Chr1_-_28554810_28554930 0.41 AT1G76100.1
AT1G76100.2
PETE1
plastocyanin 1
arTal_v1_Chr5_+_24772326_24772326 0.41 AT5G61620.1
AT5G61620
myb-like transcription factor family protein
arTal_v1_Chr3_+_5166175_5166206 0.40 AT3G15350.2
AT3G15350.1
AT3G15350
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
arTal_v1_Chr3_-_1624819_1624852 0.40 AT3G05600.2
AT3G05600.1
AT3G05600
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_-_9640918_9640918 0.40 AT3G26300.1
CYP71B34
cytochrome P450, family 71, subfamily B, polypeptide 34
arTal_v1_Chr4_-_18179183_18179266 0.40 AT4G39010.2
AT4G39010.1
GH9B18
glycosyl hydrolase 9B18
arTal_v1_Chr3_-_19410148_19410148 0.40 AT3G52350.1
AT3G52350
D111/G-patch domain-containing protein
arTal_v1_Chr4_-_6718550_6718550 0.40 AT4G10960.1
UGE5
UDP-D-glucose/UDP-D-galactose 4-epimerase 5
arTal_v1_Chr4_+_585598_585610 0.39 AT4G01430.1
AT4G01430.2
AT4G01430.3
UMAMIT29
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr4_+_485743_485777 0.39 AT4G01130.1
AT4G01130.2
AT4G01130.3
AT4G01130
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr1_+_10371675_10371675 0.39 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr1_+_18264944_18264944 0.39 AT1G49350.1
AT1G49350
pfkB-like carbohydrate kinase family protein
arTal_v1_Chr1_-_25049424_25049424 0.39 AT1G67090.2
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
arTal_v1_Chr1_-_25049667_25049667 0.39 AT1G67090.1
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
arTal_v1_Chr3_-_7286442_7286442 0.39 AT3G20830.1
UCNL
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
arTal_v1_Chr1_-_3135976_3135976 0.38 AT1G09680.1
AT1G09680
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr5_-_21291928_21291928 0.38 AT5G52450.1
AT5G52450
MATE efflux family protein
arTal_v1_Chr4_-_13112482_13112482 0.38 AT4G25750.1
ABCG4
ABC-2 type transporter family protein
arTal_v1_Chr2_+_8431363_8431444 0.38 AT2G19460.2
AT2G19460.1
AT2G19460
DUF3511 domain protein (DUF3511)
arTal_v1_Chr1_+_25319804_25319804 0.38 AT1G67560.1
LOX6
PLAT/LH2 domain-containing lipoxygenase family protein
arTal_v1_Chr5_-_19899301_19899301 0.38 AT5G49100.1
AT5G49100
vitellogenin-like protein
arTal_v1_Chr3_+_17629530_17629530 0.38 AT3G47790.2
AT3G47790.1
AT3G47790.3
ABCA8
ABC2 homolog 7
arTal_v1_Chr5_+_1536057_1536096 0.38 AT5G05180.2
AT5G05180.1
AT5G05180.3
AT5G05180
myosin heavy chain, striated protein
arTal_v1_Chr1_-_29869784_29869784 0.38 AT1G79410.1
OCT5
organic cation/carnitine transporter5
arTal_v1_Chr2_-_15185314_15185405 0.38 AT2G36200.2
AT2G36200.1
AT2G36200
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr5_+_26664842_26664842 0.38 AT5G66790.1
AT5G66790
Protein kinase superfamily protein
arTal_v1_Chr3_-_4493737_4493831 0.38 AT3G13700.2
AT3G13700.1
AT3G13710.1
AT3G13700
PRA1.F4
RNA-binding (RRM/RBD/RNP motifs) family protein
prenylated RAB acceptor 1.F4
arTal_v1_Chr4_+_10521259_10521379 0.37 AT4G19230.1
AT4G19230.2
CYP707A1
cytochrome P450, family 707, subfamily A, polypeptide 1
arTal_v1_Chr1_-_4020765_4020765 0.37 AT1G11910.2
APA1
aspartic proteinase A1
arTal_v1_Chr1_-_22096620_22096620 0.37 AT1G60010.1
AT1G60010
D-ribose-binding periplasmic protein
arTal_v1_Chr2_-_821291_821291 0.37 AT2G02835.1
AT2G02835
nucleic acid/zinc ion-binding protein
arTal_v1_Chr1_-_4021043_4021043 0.37 AT1G11910.1
APA1
aspartic proteinase A1
arTal_v1_Chr5_-_2622900_2622900 0.37 AT5G08150.1
SOB5
suppressor of phytochrome b 5
arTal_v1_Chr5_+_14273535_14273535 0.37 AT5G36230.2
AT5G36230
ARM repeat superfamily protein
arTal_v1_Chr1_+_23192146_23192146 0.37 AT1G62640.2
AT1G62640.1
KAS III
3-ketoacyl-acyl carrier protein synthase III
arTal_v1_Chr1_-_23262002_23262002 0.37 AT1G62810.1
CuAO1
Copper amine oxidase family protein
arTal_v1_Chr5_-_24256285_24256285 0.36 AT5G60260.1
AT5G60260
hypothetical protein
arTal_v1_Chr4_+_2543422_2543422 0.36 AT4G04972.1
AT4G04972
hypothetical protein
arTal_v1_Chr3_+_16945230_16945230 0.36 AT3G46130.2
AT3G46130.1
MYB48
myb domain protein 48
arTal_v1_Chr4_-_14439723_14439769 0.36 AT4G29310.1
AT4G29310.2
AT4G29310
DUF1005 family protein (DUF1005)
arTal_v1_Chr4_-_15275404_15275404 0.36 AT4G31500.1
CYP83B1
cytochrome P450, family 83, subfamily B, polypeptide 1
arTal_v1_Chr3_-_23195917_23195917 0.36 AT3G62700.1
ABCC14
multidrug resistance-associated protein 10
arTal_v1_Chr5_-_9574135_9574135 0.36 AT5G27210.1
Cand8
Protein of unknown function, transmembrane-40
arTal_v1_Chr3_+_16945433_16945525 0.36 AT3G46130.3
AT3G46130.4
MYB48
myb domain protein 48
arTal_v1_Chr5_+_14273345_14273345 0.36 AT5G36230.1
AT5G36230
ARM repeat superfamily protein
arTal_v1_Chr5_+_1767630_1767630 0.36 AT5G05870.1
UGT76C1
UDP-glucosyl transferase 76C1
arTal_v1_Chr1_+_8156504_8156504 0.36 AT1G23030.1
AT1G23030
ARM repeat superfamily protein
arTal_v1_Chr3_-_1583073_1583073 0.35 AT3G05470.1
AT3G05470
Actin-binding FH2 (formin homology 2) family protein
arTal_v1_Chr1_-_21436032_21436103 0.35 AT1G57870.4
AT1G57870.3
SK42
shaggy-like kinase 42
arTal_v1_Chr4_+_12072760_12072760 0.35 AT4G23030.1
AT4G23030
MATE efflux family protein
arTal_v1_Chr1_-_22382422_22382422 0.35 AT1G60790.1
TBL2
trichome birefringence-like protein (DUF828)
arTal_v1_Chr2_-_15599951_15599951 0.35 AT2G37130.2
AT2G37130
Peroxidase superfamily protein
arTal_v1_Chr4_+_12524186_12524186 0.35 AT4G24120.1
YSL1
YELLOW STRIPE like 1
arTal_v1_Chr1_-_59215_59215 0.35 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
arTal_v1_Chr3_+_5748497_5748497 0.35 AT3G16850.1
AT3G16850
Pectin lyase-like superfamily protein
arTal_v1_Chr4_-_10567838_10567838 0.35 AT4G19370.1
AT4G19370
chitin synthase, putative (DUF1218)
arTal_v1_Chr5_+_947311_947311 0.35 AT5G03670.2
TRM28
histone-lysine N-methyltransferase SETD1B-like protein
arTal_v1_Chr1_-_3427366_3427531 0.35 AT1G10417.3
AT1G10417.4
AT1G10417.1
AT1G10417.2
AT1G10417
RUN/FYVE domain protein
arTal_v1_Chr5_-_7385833_7385833 0.35 AT5G22310.1
AT5G22310
trichohyalin-like protein
arTal_v1_Chr1_+_23425352_23425352 0.34 AT1G63170.1
AT1G63170
Zinc finger, C3HC4 type (RING finger) family protein
arTal_v1_Chr3_+_21479380_21479380 0.34 AT3G58020.1
AT3G58020
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr1_+_24602033_24602033 0.34 AT1G66090.1
AT1G66090
Disease resistance protein (TIR-NBS class)
arTal_v1_Chr2_-_15600154_15600154 0.34 AT2G37130.1
AT2G37130
Peroxidase superfamily protein
arTal_v1_Chr2_+_18558885_18558938 0.34 AT2G44990.2
AT2G44990.3
AT2G44990.1
CCD7
carotenoid cleavage dioxygenase 7
arTal_v1_Chr5_-_9140211_9140257 0.34 AT5G26150.2
AT5G26150.1
AT5G26150
protein kinase family protein
arTal_v1_Chr1_-_3239554_3239554 0.34 AT1G09940.1
HEMA2
Glutamyl-tRNA reductase family protein
arTal_v1_Chr3_-_18817405_18817405 0.34 AT3G50660.1
AT3G50660.2
DWF4
Cytochrome P450 superfamily protein
arTal_v1_Chr4_-_176870_176870 0.34 AT4G00400.1
GPAT8
glycerol-3-phosphate acyltransferase 8
arTal_v1_Chr5_+_18681326_18681326 0.34 AT5G46060.1
AT5G46060
spastin, putative (Protein of unknown function, DUF599)
arTal_v1_Chr5_-_26933286_26933352 0.34 AT5G67480.1
AT5G67480.3
BT4
BTB and TAZ domain protein 4
arTal_v1_Chr4_+_14954204_14954204 0.33 AT4G30650.1
AT4G30650
Low temperature and salt responsive protein family
arTal_v1_Chr1_-_25870227_25870227 0.33 AT1G68825.1
RTFL15
ROTUNDIFOLIA like 15
arTal_v1_Chr3_-_21407434_21407434 0.33 AT3G57790.2
AT3G57790
Pectin lyase-like superfamily protein
arTal_v1_Chr2_+_7693596_7693596 0.33 AT2G17710.1
AT2G17710
Big1
arTal_v1_Chr3_+_21076505_21076505 0.33 AT3G56940.1
AT3G56940.2
CRD1
dicarboxylate diiron protein, putative (Crd1)
arTal_v1_Chr4_-_11566377_11566377 0.33 AT4G21770.1
AT4G21770.2
AT4G21770
Pseudouridine synthase family protein
arTal_v1_Chr5_-_22658084_22658084 0.33 AT5G55940.1
emb2731
Uncharacterized protein family (UPF0172)
arTal_v1_Chr4_+_10366044_10366059 0.33 AT4G18910.1
AT4G18910.2
NIP1%3B2
NOD26-like intrinsic protein 1;2
arTal_v1_Chr5_-_15200868_15200868 0.33 AT5G38100.3
AT5G38100
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr5_-_25398282_25398282 0.32 AT5G63410.1
AT5G63410
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_-_26970668_26970668 0.32 AT5G67640.1
AT5G67640
hypothetical protein
arTal_v1_Chr1_-_5911695_5911708 0.32 AT1G17270.1
AT1G17270.2
AT1G17270
O-fucosyltransferase family protein
arTal_v1_Chr5_-_26932825_26932825 0.32 AT5G67480.2
BT4
BTB and TAZ domain protein 4
arTal_v1_Chr4_+_6745100_6745119 0.32 AT4G11040.2
AT4G11040.1
AT4G11040
Protein phosphatase 2C family protein
arTal_v1_Chr5_-_1293723_1293723 0.32 AT5G04530.1
KCS19
3-ketoacyl-CoA synthase 19
arTal_v1_Chr1_-_4679594_4679594 0.31 AT1G13640.2
AT1G13640
Phosphatidylinositol 3- and 4-kinase family protein
arTal_v1_Chr5_-_16021916_16021916 0.31 AT5G40010.1
AATP1
AAA-ATPase 1
arTal_v1_Chr5_+_947146_947146 0.31 AT5G03670.1
TRM28
histone-lysine N-methyltransferase SETD1B-like protein
arTal_v1_Chr2_-_521707_521737 0.31 AT2G02080.4
AT2G02080.2
AT2G02080.5
AT2G02080.6
AT2G02080.3
AT2G02080.1
IDD4
indeterminate(ID)-domain 4
arTal_v1_Chr1_-_10647650_10647650 0.31 AT1G30250.1
AT1G30250
hypothetical protein
arTal_v1_Chr5_-_17486309_17486309 0.31 AT5G43520.1
AT5G43520
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr4_-_10647079_10647280 0.31 AT4G19520.1
AT4G19520.3
AT4G19520.2
AT4G19520.5
AT4G19520.4
AT4G19520
disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr3_-_21407624_21407624 0.31 AT3G57790.1
AT3G57790
Pectin lyase-like superfamily protein
arTal_v1_Chr5_-_25978439_25978439 0.31 AT5G65040.1
AT5G65040
senescence-associated family protein (DUF581)
arTal_v1_Chr5_-_3322910_3322935 0.31 AT5G10520.1
AT5G10520.2
RBK1
ROP binding protein kinases 1
arTal_v1_Chr5_+_20090648_20090648 0.31 AT5G49520.1
WRKY48
WRKY DNA-binding protein 48
arTal_v1_Chr5_+_23074867_23074867 0.31 AT5G57020.1
NMT1
myristoyl-CoA:protein N-myristoyltransferase
arTal_v1_Chr1_+_6886669_6886669 0.31 AT1G19850.1
MP
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
arTal_v1_Chr2_+_14892495_14892495 0.31 AT2G35380.2
AT2G35380.1
AT2G35380
Peroxidase superfamily protein
arTal_v1_Chr5_-_25080858_25080858 0.30 AT5G62470.1
MYB96
myb domain protein 96
arTal_v1_Chr5_+_6430486_6430486 0.30 AT5G19160.2
AT5G19160.1
TBL11
TRICHOME BIREFRINGENCE-LIKE 11
arTal_v1_Chr4_-_13920352_13920378 0.30 AT4G27970.2
AT4G27970.3
AT4G27970.1
AT4G27970.6
AT4G27970.5
AT4G27970.4
SLAH2
SLAC1 homologue 2
arTal_v1_Chr1_+_24929887_24929887 0.30 AT1G66820.1
AT1G66820
glycine-rich protein
arTal_v1_Chr1_-_18753941_18753941 0.30 AT1G50630.1
AT1G50630.2
AT1G50630
extracellular ligand-gated ion channel protein (DUF3537)
arTal_v1_Chr1_-_1996355_1996355 0.30 AT1G06520.1
GPAT1
glycerol-3-phosphate acyltransferase 1
arTal_v1_Chr1_+_6886867_6886867 0.30 AT1G19850.2
MP
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
arTal_v1_Chr5_+_463073_463073 0.30 AT5G02260.1
EXPA9
expansin A9
arTal_v1_Chr5_-_25081141_25081141 0.30 AT5G62470.2
MYB96
myb domain protein 96
arTal_v1_Chr1_-_27263719_27263828 0.30 AT1G72420.3
AT1G72420.6
AT1G72420.4
AT1G72420.5
AT1G72420.2
AT1G72420.1
AT1G72420
NADH:ubiquinone oxidoreductase intermediate-associated protein 30
arTal_v1_Chr1_-_4679862_4679862 0.30 AT1G13640.1
AT1G13640
Phosphatidylinositol 3- and 4-kinase family protein
arTal_v1_Chr4_-_9178139_9178139 0.30 AT4G16210.1
ECHIA
enoyl-CoA hydratase/isomerase A
arTal_v1_Chr4_-_15991536_15991633 0.30 AT4G33150.1
AT4G33150.2
AT4G33150
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
arTal_v1_Chr5_+_8113754_8113754 0.30 AT5G24010.1
AT5G24010
Protein kinase superfamily protein
arTal_v1_Chr1_-_4973726_4973726 0.30 AT1G14530.1
AT1G14530.2
THH1
tobamovirus multiplication-like protein (DUF1084)
arTal_v1_Chr2_-_19166949_19166967 0.29 AT2G46680.2
AT2G46680.1
HB-7
homeobox 7
arTal_v1_Chr3_+_5539631_5539631 0.29 AT3G16340.2
ABCG29
pleiotropic drug resistance 1
arTal_v1_Chr3_-_19699392_19699392 0.29 AT3G53150.1
UGT73D1
UDP-glucosyl transferase 73D1
arTal_v1_Chr3_+_5539385_5539385 0.29 AT3G16340.1
ABCG29
pleiotropic drug resistance 1
arTal_v1_Chr5_-_5367612_5367612 0.29 AT5G16410.1
AT5G16410
HXXXD-type acyl-transferase family protein
arTal_v1_Chr3_-_16634569_16634569 0.29 AT3G45330.1
AT3G45330
Concanavalin A-like lectin protein kinase family protein
arTal_v1_Chr3_+_188321_188384 0.29 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
arTal_v1_Chr1_+_11265816_11265816 0.29 AT1G31480.1
SGR2
shoot gravitropism 2 (SGR2)
arTal_v1_Chr3_-_5618322_5618322 0.29 AT3G16510.1
AT3G16510
Calcium-dependent lipid-binding (CaLB domain) family protein
arTal_v1_Chr1_+_18305445_18305445 0.29 AT1G49450.1
AT1G49450
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr2_+_18677311_18677311 0.29 AT2G45300.4
AT2G45300.3
AT2G45300.2
AT2G45300.1
AT2G45300
RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
arTal_v1_Chr1_-_4964515_4964515 0.29 AT1G14510.1
AL7
alfin-like 7
arTal_v1_Chr2_+_16588556_16588696 0.29 AT2G39770.1
AT2G39770.2
CYT1
Glucose-1-phosphate adenylyltransferase family protein
arTal_v1_Chr5_+_24003888_24003888 0.29 AT5G59570.1
AT5G59570.2
BOA
Homeodomain-like superfamily protein
arTal_v1_Chr1_+_23850572_23850572 0.29 AT1G64270.1
AT1G64270

arTal_v1_Chr2_+_16588872_16588872 0.29 AT2G39770.3
CYT1
Glucose-1-phosphate adenylyltransferase family protein
arTal_v1_Chr1_+_22835078_22835078 0.29 AT1G61820.1
BGLU46
beta glucosidase 46
arTal_v1_Chr3_+_1621355_1621405 0.28 AT3G05590.1
AT3G05590.2
AT3G05590.3
RPL18
ribosomal protein L18
arTal_v1_Chr1_-_21436329_21436329 0.28 AT1G57870.1
SK42
shaggy-like kinase 42
arTal_v1_Chr3_-_5605765_5605765 0.28 AT3G16490.1
IQD26
IQ-domain 26

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G15170

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.5 GO:0009647 skotomorphogenesis(GO:0009647)
0.2 0.7 GO:0042353 fucose biosynthetic process(GO:0042353)
0.2 1.1 GO:0046713 borate transport(GO:0046713)
0.2 0.6 GO:0006659 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.2 0.5 GO:0015696 ammonium transport(GO:0015696)
0.1 0.4 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.1 0.4 GO:0016118 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.1 0.9 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.1 0.3 GO:0006499 N-terminal protein lipidation(GO:0006498) N-terminal protein myristoylation(GO:0006499) protein myristoylation(GO:0018377)
0.1 0.9 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.1 0.5 GO:0006788 heme oxidation(GO:0006788)
0.1 0.4 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.1 0.3 GO:0035017 cuticle pattern formation(GO:0035017)
0.1 0.6 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.1 0.3 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.1 0.2 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.1 1.2 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.2 GO:0080051 cutin transport(GO:0080051)
0.1 0.3 GO:1900409 positive regulation of cellular response to oxidative stress(GO:1900409)
0.1 0.2 GO:0044277 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.1 0.4 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.1 0.3 GO:0009660 amyloplast organization(GO:0009660)
0.1 0.4 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.1 0.2 GO:0031054 pre-miRNA processing(GO:0031054)
0.1 0.2 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.1 0.2 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.1 0.5 GO:0010098 suspensor development(GO:0010098)
0.1 0.2 GO:0098609 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.1 0.4 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 0.2 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.1 1.1 GO:0009750 response to fructose(GO:0009750)
0.1 0.4 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.1 0.2 GO:0010446 response to alkaline pH(GO:0010446)
0.1 0.2 GO:0010434 nectary development(GO:0010254) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.1 0.2 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.4 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.1 0.5 GO:0060359 response to ammonium ion(GO:0060359)
0.1 0.5 GO:0010358 leaf shaping(GO:0010358)
0.1 0.2 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.0 0.4 GO:0010047 fruit dehiscence(GO:0010047)
0.0 0.8 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.0 0.2 GO:0035627 ceramide transport(GO:0035627)
0.0 1.4 GO:0010025 wax biosynthetic process(GO:0010025)
0.0 0.2 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.0 0.2 GO:0019377 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.0 0.2 GO:0010362 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.0 0.6 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.0 0.4 GO:1990937 xylan acetylation(GO:1990937)
0.0 0.0 GO:0080029 cellular response to boron-containing substance levels(GO:0080029)
0.0 0.2 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.0 0.4 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.4 GO:0009942 longitudinal axis specification(GO:0009942)
0.0 0.1 GO:0080088 spermidine hydroxycinnamate conjugate biosynthetic process(GO:0080088)
0.0 0.1 GO:0071217 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217)
0.0 0.1 GO:1990532 stress response to nickel ion(GO:1990532)
0.0 0.7 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.2 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.0 0.4 GO:0017157 regulation of exocytosis(GO:0017157)
0.0 0.3 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.0 0.1 GO:0036473 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.0 0.2 GO:1901004 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.0 0.3 GO:0043486 histone exchange(GO:0043486)
0.0 0.2 GO:0018874 benzoate metabolic process(GO:0018874)
0.0 0.1 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.0 0.1 GO:0080093 regulation of photorespiration(GO:0080093)
0.0 0.2 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.0 0.1 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.0 0.2 GO:0046622 positive regulation of organ growth(GO:0046622)
0.0 0.1 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.0 0.2 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 0.2 GO:0090057 root radial pattern formation(GO:0090057)
0.0 1.1 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.2 GO:0035067 negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.0 0.1 GO:0015904 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.0 0.1 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 1.0 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.2 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.3 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.0 0.1 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.0 0.5 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.0 0.2 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.0 0.3 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 0.1 GO:0006517 protein deglycosylation(GO:0006517)
0.0 0.1 GO:0048530 fruit morphogenesis(GO:0048530)
0.0 0.2 GO:0009683 indoleacetic acid metabolic process(GO:0009683)
0.0 0.9 GO:0016144 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.0 0.1 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.0 0.3 GO:0009880 embryonic pattern specification(GO:0009880)
0.0 0.3 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 0.4 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.3 GO:0010555 response to mannitol(GO:0010555)
0.0 1.1 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.6 GO:0007186 G-protein coupled receptor signaling pathway(GO:0007186)
0.0 0.3 GO:0010332 response to gamma radiation(GO:0010332)
0.0 0.1 GO:0015802 basic amino acid transport(GO:0015802)
0.0 0.3 GO:0006538 glutamate catabolic process(GO:0006538)
0.0 0.2 GO:0045903 positive regulation of translational fidelity(GO:0045903)
0.0 0.1 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.0 0.2 GO:0010044 response to aluminum ion(GO:0010044)
0.0 0.2 GO:0080026 response to indolebutyric acid(GO:0080026)
0.0 0.5 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.1 GO:0035494 SNARE complex disassembly(GO:0035494)
0.0 0.2 GO:0010088 phloem development(GO:0010088)
0.0 0.1 GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.0 0.2 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 0.5 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.2 GO:0010206 photosystem II repair(GO:0010206)
0.0 0.5 GO:0030042 actin filament depolymerization(GO:0030042)
0.0 0.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.4 GO:0046688 response to copper ion(GO:0046688)
0.0 0.5 GO:1900674 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 0.1 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 1.3 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.1 GO:0030203 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.0 0.1 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.0 0.0 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.0 0.0 GO:0098534 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
0.0 0.2 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.1 GO:0080183 response to photooxidative stress(GO:0080183)
0.0 0.0 GO:0018364 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.0 1.0 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.1 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.1 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.0 GO:0090603 sieve element differentiation(GO:0090603)
0.0 0.3 GO:0009785 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 0.1 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.0 0.4 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.2 GO:0006102 isocitrate metabolic process(GO:0006102)
0.0 0.2 GO:0036297 interstrand cross-link repair(GO:0036297)
0.0 0.1 GO:0042550 photosystem I stabilization(GO:0042550)
0.0 0.1 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.0 0.2 GO:0010039 response to iron ion(GO:0010039)
0.0 0.2 GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.0 0.1 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.0 0.2 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.0 0.1 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122) mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.0 0.1 GO:0043102 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.0 0.1 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 0.4 GO:0006284 base-excision repair(GO:0006284)
0.0 0.4 GO:0007030 Golgi organization(GO:0007030)
0.0 0.1 GO:0005980 glycogen catabolic process(GO:0005980)
0.0 0.2 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.1 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.0 0.2 GO:0006826 iron ion transport(GO:0006826)
0.0 0.2 GO:0006265 DNA topological change(GO:0006265)
0.0 0.0 GO:0030100 regulation of endocytosis(GO:0030100)
0.0 0.3 GO:0070417 cellular response to cold(GO:0070417)
0.0 0.5 GO:0009690 cytokinin metabolic process(GO:0009690)
0.0 0.6 GO:0009809 lignin biosynthetic process(GO:0009809)
0.0 0.2 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.9 GO:0009734 auxin-activated signaling pathway(GO:0009734)
0.0 0.2 GO:0050821 protein stabilization(GO:0050821)
0.0 0.2 GO:0080156 mitochondrial mRNA modification(GO:0080156)
0.0 0.4 GO:0009625 response to insect(GO:0009625)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.1 GO:0016328 lateral plasma membrane(GO:0016328)
0.1 0.2 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 0.3 GO:0000812 Swr1 complex(GO:0000812)
0.1 0.5 GO:0016272 prefoldin complex(GO:0016272)
0.0 0.1 GO:0045495 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.0 0.2 GO:0009897 external side of plasma membrane(GO:0009897)
0.0 0.4 GO:0010369 chromocenter(GO:0010369)
0.0 0.3 GO:0000813 ESCRT I complex(GO:0000813)
0.0 0.3 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.3 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 0.2 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 0.1 GO:0031261 DNA replication preinitiation complex(GO:0031261)
0.0 0.3 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.2 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.0 0.1 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.0 0.1 GO:0030093 chloroplast photosystem I(GO:0030093)
0.0 0.4 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.1 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.2 GO:0031298 replication fork protection complex(GO:0031298)
0.0 0.1 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.0 0.2 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.0 0.2 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.0 1.1 GO:0031977 thylakoid lumen(GO:0031977)
0.0 0.2 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.0 1.5 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.1 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.0 GO:0005813 centrosome(GO:0005813) centriole(GO:0005814)
0.0 0.3 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.0 GO:0009501 amyloplast(GO:0009501)
0.0 0.2 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.3 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.1 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.3 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.2 0.7 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.2 1.1 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.2 0.5 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.2 0.6 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.2 0.9 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.1 0.4 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.1 0.6 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.1 0.5 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
0.1 0.8 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.1 0.3 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.1 0.3 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.1 0.2 GO:0015180 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
0.1 0.4 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 0.4 GO:0052593 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.1 0.3 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.1 0.6 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.4 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.3 GO:0019172 glyoxalase III activity(GO:0019172)
0.1 0.4 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.2 GO:0080106 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.1 0.2 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
0.1 0.2 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.1 0.5 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 0.7 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 0.2 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 0.2 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.1 0.3 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.2 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.1 0.2 GO:0070034 telomerase RNA binding(GO:0070034)
0.1 0.7 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.1 0.3 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.0 0.2 GO:0035620 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.0 0.3 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 0.2 GO:0051980 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.0 0.7 GO:0004312 fatty acid synthase activity(GO:0004312)
0.0 0.1 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.0 0.2 GO:0015245 fatty acid transporter activity(GO:0015245)
0.0 0.2 GO:0004594 pantothenate kinase activity(GO:0004594)
0.0 0.1 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.0 0.2 GO:0004348 glucosylceramidase activity(GO:0004348)
0.0 0.2 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.0 0.2 GO:0080002 UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.0 0.6 GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor(GO:0016634)
0.0 0.7 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.4 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.3 GO:0004300 enoyl-CoA hydratase activity(GO:0004300)
0.0 0.1 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.0 0.4 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.3 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0 0.5 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.6 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.1 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.0 0.2 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.3 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.1 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.0 0.1 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.0 1.1 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 0.2 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.0 0.1 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.0 0.2 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.1 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.1 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.0 0.4 GO:0016157 sucrose synthase activity(GO:0016157)
0.0 0.2 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.0 0.2 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.0 0.2 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.0 0.1 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.0 0.2 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.0 0.1 GO:0008493 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 0.6 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.0 0.2 GO:0010011 auxin binding(GO:0010011) auxin influx transmembrane transporter activity(GO:0010328)
0.0 0.4 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.1 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 0.1 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.0 1.2 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.6 GO:0005267 potassium channel activity(GO:0005267)
0.0 0.1 GO:0004113 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.0 0.2 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0 0.6 GO:0016597 amino acid binding(GO:0016597)
0.0 0.1 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.0 0.3 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.1 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.0 0.1 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.1 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.0 0.1 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.0 0.0 GO:0036009 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.0 0.1 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.2 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.1 GO:0000213 tRNA-intron endonuclease activity(GO:0000213)
0.0 0.3 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 0.3 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 0.9 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.3 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.1 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.0 0.4 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.1 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.0 0.1 GO:0016872 intramolecular lyase activity(GO:0016872)
0.0 0.2 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.0 0.3 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.0 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.2 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.6 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.1 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.0 0.1 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.1 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 1.0 GO:0005337 nucleoside transmembrane transporter activity(GO:0005337)
0.0 0.2 GO:0051117 ATPase binding(GO:0051117)
0.0 0.2 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.0 0.0 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.0 0.1 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 0.4 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.3 GO:0005179 hormone activity(GO:0005179)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 PID P53 REGULATION PATHWAY p53 pathway
0.1 0.4 NABA CORE MATRISOME Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans
0.0 0.1 ST ERK1 ERK2 MAPK PATHWAY ERK1/ERK2 MAPK Pathway
0.0 0.1 SIG CHEMOTAXIS Genes related to chemotaxis
0.0 0.2 PID HES HEY PATHWAY Notch-mediated HES/HEY network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.1 0.3 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.1 0.2 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.0 0.3 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.0 0.1 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.0 0.2 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.0 0.2 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.0 0.2 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 0.1 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.0 0.2 REACTOME METABOLISM OF CARBOHYDRATES Genes involved in Metabolism of carbohydrates
0.0 0.3 REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE Genes involved in SRP-dependent cotranslational protein targeting to membrane