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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT3G21890

Z-value: 1.10

Transcription factors associated with AT3G21890

Gene Symbol Gene ID Gene Info
AT3G21890
AT3G21890 B-box type zinc finger family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
BBX31arTal_v1_Chr3_-_7709933_7709933-0.461.0e-01Click!

Activity profile of AT3G21890 motif

Sorted Z-values of AT3G21890 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr4_-_7421828_7421828 1.63 AT4G12520.1
AT4G12520
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr4_+_6832650_6832650 1.48 AT4G11210.1
AT4G11210
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr4_-_13016235_13016235 1.48 AT4G25470.1
CBF2
C-repeat/DRE binding factor 2
arTal_v1_Chr4_+_6826587_6826587 1.46 AT4G11190.1
AT4G11190
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr1_-_10164452_10164452 1.40 AT1G29090.1
AT1G29090
Cysteine proteinases superfamily protein
arTal_v1_Chr2_-_9538963_9538963 1.30 AT2G22470.1
AGP2
arabinogalactan protein 2
arTal_v1_Chr4_-_13022996_13022996 1.28 AT4G25490.1
CBF1
C-repeat/DRE binding factor 1
arTal_v1_Chr5_+_1119937_1119937 1.24 AT5G04120.1
AT5G04120
Phosphoglycerate mutase family protein
arTal_v1_Chr4_+_11753842_11753842 1.24 AT4G22212.1
AT4G22212
defensin-like protein
arTal_v1_Chr5_-_19036938_19036938 1.24 AT5G46890.1
AT5G46890
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr3_-_1758807_1758807 1.24 AT3G05890.1
RCI2B
Low temperature and salt responsive protein family
arTal_v1_Chr1_-_27998821_27998821 1.24 AT1G74500.1
BS1
activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1
arTal_v1_Chr5_-_19040456_19040456 1.19 AT5G46900.1
AT5G46900
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_-_16995062_16995062 1.19 AT5G42500.1
AT5G42500
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr1_-_30173109_30173109 1.18 AT1G80240.1
DGR1
choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)
arTal_v1_Chr5_-_14753088_14753088 1.18 AT5G37260.1
RVE2
Homeodomain-like superfamily protein
arTal_v1_Chr1_+_5872024_5872024 1.17 AT1G17180.1
GSTU25
glutathione S-transferase TAU 25
arTal_v1_Chr3_-_21097481_21097481 1.17 AT3G57010.1
AT3G57010
Calcium-dependent phosphotriesterase superfamily protein
arTal_v1_Chr2_-_15036556_15036556 1.17 AT2G35770.1
scpl28
serine carboxypeptidase-like 28
arTal_v1_Chr3_+_8008534_8008534 1.14 AT3G22620.1
AT3G22620
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_+_23337832_23337832 1.10 AT5G57625.1
AT5G57625
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
arTal_v1_Chr4_+_16185044_16185044 1.10 AT4G33730.1
AT4G33730
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
arTal_v1_Chr4_+_11754912_11754912 1.09 AT4G22214.1
AT4G22214
Defensin-like (DEFL) family protein
arTal_v1_Chr4_+_7439115_7439115 1.08 AT4G12550.1
AIR1
Auxin-Induced in Root cultures 1
arTal_v1_Chr4_+_8646150_8646150 1.07 AT4G15160.2
AT4G15160.1
AT4G15160
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr2_+_19151481_19151481 1.06 AT2G46650.1
CB5-C
cytochrome B5 isoform C
arTal_v1_Chr5_+_25064793_25064793 1.06 AT5G62420.1
AT5G62420
NAD(P)-linked oxidoreductase superfamily protein
arTal_v1_Chr1_-_6579314_6579314 1.06 AT1G19050.1
ARR7
response regulator 7
arTal_v1_Chr5_+_16301072_16301072 1.05 AT5G40730.1
AGP24
arabinogalactan protein 24
arTal_v1_Chr4_-_10934225_10934237 1.04 AT4G20240.1
AT4G20240.2
CYP71A27
cytochrome P450, family 71, subfamily A, polypeptide 27
arTal_v1_Chr5_+_19434758_19434758 1.03 AT5G47990.1
CYP705A5
cytochrome P450, family 705, subfamily A, polypeptide 5
arTal_v1_Chr5_-_3728726_3728726 1.03 AT5G11590.1
TINY2
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr2_-_19352088_19352088 1.02 AT2G47140.1
SDR5
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr5_+_19481897_19481897 1.00 AT5G48070.1
XTH20
xyloglucan endotransglucosylase/hydrolase 20
arTal_v1_Chr3_-_8589754_8589754 0.99 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
arTal_v1_Chr1_+_8195776_8195776 0.98 AT1G23100.1
AT1G23100
GroES-like family protein
arTal_v1_Chr4_-_15954803_15954803 0.98 AT4G33070.1
AT4G33070
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
arTal_v1_Chr5_-_3172701_3172701 0.98 AT5G10130.1
AT5G10130
Pollen Ole e 1 allergen and extensin family protein
arTal_v1_Chr5_+_8033665_8033738 0.97 AT5G23830.1
AT5G23830.2
AT5G23830
MD-2-related lipid recognition domain-containing protein
arTal_v1_Chr1_+_4342209_4342282 0.97 AT1G12740.1
AT1G12740.2
AT1G12740.3
AT1G12740.4
CYP87A2
cytochrome P450, family 87, subfamily A, polypeptide 2
arTal_v1_Chr4_-_18206684_18206684 0.97 AT4G39070.1
BZS1
B-box zinc finger family protein
arTal_v1_Chr1_+_1529767_1529767 0.97 AT1G05260.1
RCI3
Peroxidase superfamily protein
arTal_v1_Chr5_-_16174783_16174783 0.97 AT5G40420.1
OLEO2
oleosin 2
arTal_v1_Chr5_+_26772644_26772644 0.96 AT5G67080.1
MAPKKK19
mitogen-activated protein kinase kinase kinase 19
arTal_v1_Chr2_-_8235440_8235440 0.96 AT2G18980.1
AT2G18980
Peroxidase superfamily protein
arTal_v1_Chr4_+_13811612_13811612 0.96 AT4G27654.1
AT4G27654
transmembrane protein
arTal_v1_Chr5_-_2365605_2365605 0.96 AT5G07475.1
AT5G07475
Cupredoxin superfamily protein
arTal_v1_Chr3_+_512220_512220 0.96 AT3G02480.1
AT3G02480
Late embryogenesis abundant protein (LEA) family protein
arTal_v1_Chr1_+_4604688_4604688 0.96 AT1G13420.1
ST4B
sulfotransferase 4B
arTal_v1_Chr4_-_12339967_12339967 0.95 AT4G23690.1
DIR6
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr1_+_23168767_23168767 0.95 AT1G62570.1
FMO GS-OX4
flavin-monooxygenase glucosinolate S-oxygenase 4
arTal_v1_Chr1_-_28581315_28581315 0.95 AT1G76160.1
sks5
SKU5 similar 5
arTal_v1_Chr3_-_7656053_7656053 0.95 AT3G21720.1
ICL
isocitrate lyase
arTal_v1_Chr4_+_1569937_1569937 0.94 AT4G03540.1
AT4G03540
Uncharacterized protein family (UPF0497)
arTal_v1_Chr2_+_13674255_13674398 0.94 AT2G32190.2
AT2G32190.1
AT2G32190
cysteine-rich/transmembrane domain A-like protein
arTal_v1_Chr1_+_17385707_17385707 0.94 AT1G47400.1
AT1G47400
hypothetical protein
arTal_v1_Chr3_-_7864895_7864895 0.93 AT3G22240.1
AT3G22240
cysteine-rich/transmembrane domain PCC1-like protein
arTal_v1_Chr5_-_16236_16236 0.92 AT5G01040.1
LAC8
laccase 8
arTal_v1_Chr4_-_17041131_17041131 0.92 AT4G36010.2
AT4G36010
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr4_-_17041326_17041326 0.91 AT4G36010.1
AT4G36010
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr1_-_8075037_8075037 0.91 AT1G22810.1
AT1G22810
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_+_19428888_19428888 0.91 AT5G47980.1
AT5G47980
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_+_25485486_25485486 0.90 AT5G63660.1
PDF2.5
Scorpion toxin-like knottin superfamily protein
arTal_v1_Chr2_-_7182287_7182287 0.89 AT2G16570.1
ASE1
GLN phosphoribosyl pyrophosphate amidotransferase 1
arTal_v1_Chr4_-_682601_682601 0.89 AT4G01575.1
AT4G01575
serine protease inhibitor, Kazal-type family protein
arTal_v1_Chr5_+_26818949_26818949 0.89 AT5G67210.1
IRX15-L
IRREGULAR XYLEM protein (DUF579)
arTal_v1_Chr3_+_9480746_9480839 0.89 AT3G25900.1
AT3G25900.3
AT3G25900.2
HMT-1
Homocysteine S-methyltransferase family protein
arTal_v1_Chr1_+_28291698_28291698 0.89 AT1G75390.1
AT1G75390.2
bZIP44
basic leucine-zipper 44
arTal_v1_Chr3_-_10704010_10704018 0.88 AT3G28550.1
AT3G28550.2
AT3G28550
Proline-rich extensin-like family protein
arTal_v1_Chr1_+_20462940_20462940 0.88 AT1G54890.1
AT1G54890
Late embryogenesis abundant (LEA) protein-like protein
arTal_v1_Chr4_+_14762819_14762819 0.88 AT4G30170.1
AT4G30170
Peroxidase family protein
arTal_v1_Chr4_-_2413447_2413447 0.88 AT4G04745.1
AT4G04745
hypothetical protein
arTal_v1_Chr3_+_3595694_3595694 0.88 AT3G11430.1
GPAT5
glycerol-3-phosphate acyltransferase 5
arTal_v1_Chr2_+_539898_539898 0.88 AT2G02130.1
LCR68
low-molecular-weight cysteine-rich 68
arTal_v1_Chr1_-_6241510_6241510 0.88 AT1G18140.1
LAC1
laccase 1
arTal_v1_Chr4_+_12827856_12827937 0.86 AT4G24960.1
AT4G24960.3
AT4G24960.2
HVA22D
HVA22 homologue D
arTal_v1_Chr3_+_5025184_5025184 0.86 AT3G14940.1
PPC3
phosphoenolpyruvate carboxylase 3
arTal_v1_Chr3_+_5025383_5025383 0.86 AT3G14940.2
PPC3
phosphoenolpyruvate carboxylase 3
arTal_v1_Chr2_-_16493343_16493343 0.86 AT2G39510.1
UMAMIT14
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr2_+_13677986_13677986 0.86 AT2G32210.3
AT2G32210.2
AT2G32210.1
AT2G32210
cysteine-rich/transmembrane domain A-like protein
arTal_v1_Chr2_-_10711281_10711281 0.85 AT2G25160.2
AT2G25160.1
CYP82F1
cytochrome P450, family 82, subfamily F, polypeptide 1
arTal_v1_Chr5_+_15256243_15256276 0.85 AT5G38200.2
AT5G38200.3
AT5G38200.1
AT5G38200
Class I glutamine amidotransferase-like superfamily protein
arTal_v1_Chr4_+_13275200_13275200 0.85 AT4G26200.1
ACS7
1-amino-cyclopropane-1-carboxylate synthase 7
arTal_v1_Chr1_-_3029549_3029549 0.85 AT1G09380.1
UMAMIT25
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr3_+_5187082_5187082 0.84 AT3G15357.1
AT3G15357
phosphopantothenoylcysteine decarboxylase subunit
arTal_v1_Chr2_+_12004658_12004700 0.84 AT2G28160.1
AT2G28160.2
FRU
FER-like regulator of iron uptake
arTal_v1_Chr5_+_22808641_22808641 0.84 AT5G56320.2
AT5G56320.1
AT5G56320.3
EXPA14
expansin A14
arTal_v1_Chr3_+_9208861_9208941 0.83 AT3G25290.1
AT3G25290.2
AT3G25290
Auxin-responsive family protein
arTal_v1_Chr4_+_13130291_13130291 0.83 AT4G25820.1
XTH14
xyloglucan endotransglucosylase/hydrolase 14
arTal_v1_Chr3_-_21499676_21499676 0.83 AT3G58060.2
AT3G58060
Cation efflux family protein
arTal_v1_Chr1_-_27569823_27569823 0.83 AT1G73330.1
DR4
drought-repressed 4
arTal_v1_Chr2_+_11723398_11723398 0.82 AT2G27402.2
AT2G27402
plastid transcriptionally active protein
arTal_v1_Chr4_+_18185437_18185437 0.82 AT4G39030.1
EDS5
MATE efflux family protein
arTal_v1_Chr5_-_8167776_8167776 0.82 AT5G24140.1
SQP2
squalene monooxygenase 2
arTal_v1_Chr1_-_19672021_19672021 0.82 AT1G52827.1
CDT1
cadmium tolerance 1
arTal_v1_Chr5_-_8406132_8406151 0.81 AT5G24570.1
AT5G24575.1
AT5G24570
AT5G24575
hypothetical protein
hypothetical protein
arTal_v1_Chr3_-_6236091_6236139 0.81 AT3G18200.1
AT3G18200.2
UMAMIT4
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr1_-_11222789_11222827 0.81 AT1G31350.1
AT1G31350.2
KUF1
KAR-UP F-box 1
arTal_v1_Chr2_-_17438168_17438168 0.80 AT2G41800.1
AT2G41800
imidazolonepropionase (Protein of unknown function, DUF642)
arTal_v1_Chr1_-_3880391_3880391 0.80 AT1G11545.1
XTH8
xyloglucan endotransglucosylase/hydrolase 8
arTal_v1_Chr4_-_10176638_10176638 0.79 AT4G18422.1
AT4G18422
transmembrane protein
arTal_v1_Chr1_-_10127098_10127098 0.79 AT1G29025.1
AT1G29025
Calcium-binding EF-hand family protein
arTal_v1_Chr2_+_10622396_10622453 0.79 AT2G24980.2
AT2G24980.3
AT2G24980.1
EXT6
Proline-rich extensin-like family protein
arTal_v1_Chr3_-_21499943_21499943 0.79 AT3G58060.1
AT3G58060
Cation efflux family protein
arTal_v1_Chr1_+_25574381_25574381 0.79 AT1G68238.1
AT1G68238
transmembrane protein
arTal_v1_Chr5_-_21619281_21619281 0.78 AT5G53290.1
CRF3
cytokinin response factor 3
arTal_v1_Chr2_-_9564850_9564850 0.78 AT2G22500.1
UCP5
uncoupling protein 5
arTal_v1_Chr3_+_2441565_2441657 0.78 AT3G07650.4
AT3G07650.1
AT3G07650.3
AT3G07650.2
COL9
CONSTANS-like 9
arTal_v1_Chr5_-_7859201_7859201 0.78 AT5G23350.1
AT5G23350
GRAM domain protein/ABA-responsive-like protein
arTal_v1_Chr3_-_17760950_17760950 0.78 AT3G48100.1
RR5
response regulator 5
arTal_v1_Chr1_+_18209194_18209194 0.78 AT1G49230.1
AT1G49230
RING/U-box superfamily protein
arTal_v1_Chr2_-_5776289_5776342 0.77 AT2G13820.2
AT2G13820.1
AT2G13820.3
XYP2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr3_+_4104463_4104463 0.76 AT3G12900.1
AT3G12900
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr2_+_11773187_11773187 0.76 AT2G27550.1
ATC
centroradiali
arTal_v1_Chr1_+_7481184_7481197 0.76 AT1G21360.2
AT1G21360.1
AT1G21360.3
GLTP2
glycolipid transfer protein 2
arTal_v1_Chr2_-_6960216_6960216 0.76 AT2G16005.1
AT2G16005
MD-2-related lipid recognition domain-containing protein
arTal_v1_Chr5_+_23100516_23100641 0.75 AT5G57090.1
AT5G57090.2
EIR1
Auxin efflux carrier family protein
arTal_v1_Chr5_+_22721373_22721373 0.75 AT5G56120.1
AT5G56120
RNA polymerase II elongation factor
arTal_v1_Chr2_+_13254152_13254152 0.75 AT2G31085.1
CLE6
CLAVATA3/ESR-RELATED 6
arTal_v1_Chr5_-_17847549_17847549 0.75 AT5G44306.1
AT5G44306
hypothetical protein
arTal_v1_Chr4_-_7786161_7786161 0.75 AT4G13395.1
RTFL12
ROTUNDIFOLIA like 12
arTal_v1_Chr3_-_20418910_20418910 0.75 AT3G55090.1
ABCG16
ABC-2 type transporter family protein
arTal_v1_Chr2_+_11722770_11722770 0.74 AT2G27402.1
AT2G27402
plastid transcriptionally active protein
arTal_v1_Chr1_+_1425539_1425539 0.74 AT1G05000.3
AT1G05000.1
AT1G05000.2
PFA-DSP1
Phosphotyrosine protein phosphatases superfamily protein
arTal_v1_Chr5_+_463073_463073 0.72 AT5G02260.1
EXPA9
expansin A9
arTal_v1_Chr1_+_24292372_24292490 0.72 AT1G65390.1
AT1G65390.3
AT1G65390.2
PP2-A5
phloem protein 2 A5
arTal_v1_Chr4_+_8931617_8931617 0.72 AT4G15680.1
AT4G15680
Thioredoxin superfamily protein
arTal_v1_Chr5_+_2803833_2803957 0.72 AT5G08640.1
AT5G08640.2
FLS1
flavonol synthase 1
arTal_v1_Chr3_-_4834015_4834015 0.72 AT3G14440.1
NCED3
nine-cis-epoxycarotenoid dioxygenase 3
arTal_v1_Chr1_-_3167924_3167924 0.72 AT1G09780.1
iPGAM1
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
arTal_v1_Chr3_+_17465510_17465510 0.72 AT3G47400.1
AT3G47400
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr3_-_790693_790693 0.71 AT3G03341.1
AT3G03341
cold-regulated protein
arTal_v1_Chr5_+_18875382_18875382 0.71 AT5G46530.1
AT5G46530
AWPM-19-like family protein
arTal_v1_Chr5_+_5899046_5899046 0.71 AT5G17850.2
AT5G17850
Sodium/calcium exchanger family protein
arTal_v1_Chr5_-_18371021_18371021 0.71 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
arTal_v1_Chr1_-_18124289_18124289 0.71 AT1G49000.1
AT1G49000
transmembrane protein
arTal_v1_Chr5_+_19116719_19116785 0.70 AT5G47060.1
AT5G47060.2
AT5G47060
hypothetical protein (DUF581)
arTal_v1_Chr3_+_4462841_4462841 0.70 AT3G13650.1
AT3G13650
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr3_-_19497650_19497650 0.70 AT3G52561.1
AT3G52561
hypothetical protein
arTal_v1_Chr5_+_5898852_5898852 0.70 AT5G17850.1
AT5G17850
Sodium/calcium exchanger family protein
arTal_v1_Chr3_+_9409160_9409160 0.69 AT3G25780.1
AOC3
allene oxide cyclase 3
arTal_v1_Chr4_+_18466519_18466519 0.69 AT4G39795.1
AT4G39795
hypothetical protein (DUF581)
arTal_v1_Chr5_-_17943283_17943283 0.69 AT5G44550.1
AT5G44550
Uncharacterized protein family (UPF0497)
arTal_v1_Chr1_-_24395503_24395503 0.69 AT1G65610.1
KOR2
Six-hairpin glycosidases superfamily protein
arTal_v1_Chr3_+_22340859_22340891 0.69 AT3G60450.2
AT3G60450.1
AT3G60450
Phosphoglycerate mutase family protein
arTal_v1_Chr3_-_8125931_8125931 0.69 AT3G22930.1
AT3G22930.2
CML11
calmodulin-like 11
arTal_v1_Chr1_+_8709941_8709941 0.69 AT1G24580.1
AT1G24580
RING/U-box superfamily protein
arTal_v1_Chr1_-_29203418_29203418 0.69 AT1G77690.1
LAX3
like AUX1 3
arTal_v1_Chr3_+_21932627_21932712 0.68 AT3G59350.4
AT3G59350.5
AT3G59350.3
AT3G59350
Protein kinase superfamily protein
arTal_v1_Chr5_-_19974530_19974530 0.68 AT5G49270.1
SHV2
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
arTal_v1_Chr3_+_20354351_20354351 0.68 AT3G54940.3
AT3G54940.2
AT3G54940
Papain family cysteine protease
arTal_v1_Chr2_+_13987669_13987669 0.68 AT2G32960.1
PFA-DSP2
Phosphotyrosine protein phosphatases superfamily protein
arTal_v1_Chr5_+_25550937_25550937 0.68 AT5G63850.1
AAP4
amino acid permease 4
arTal_v1_Chr4_-_11896480_11896480 0.68 AT4G22590.1
TPPG
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr5_-_4483247_4483247 0.68 AT5G13910.1
LEP
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr3_-_1756924_1756924 0.68 AT3G05880.1
RCI2A
Low temperature and salt responsive protein family
arTal_v1_Chr5_+_15543115_15543156 0.67 AT5G38820.1
AT5G38820.2
AT5G38820
Transmembrane amino acid transporter family protein
arTal_v1_Chr5_-_19563832_19563832 0.67 AT5G48250.1
BBX8
B-box type zinc finger protein with CCT domain-containing protein
arTal_v1_Chr2_+_19508929_19508929 0.67 AT2G47550.1
AT2G47550
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr1_+_486800_486801 0.66 AT1G02400.1
AT1G02400.2
GA2OX6
gibberellin 2-oxidase 6
arTal_v1_Chr3_-_20864594_20864727 0.66 AT3G56240.2
AT3G56240.1
AT3G56240.3
CCH
copper chaperone
arTal_v1_Chr1_+_22767617_22767617 0.66 AT1G61667.1
AT1G61667
serine protease, putative (Protein of unknown function, DUF538)
arTal_v1_Chr5_+_25721733_25721733 0.66 AT5G64310.1
AGP1
arabinogalactan protein 1
arTal_v1_Chr4_+_13812989_13812989 0.66 AT4G27657.1
AT4G27657
hypothetical protein
arTal_v1_Chr3_+_21932337_21932362 0.66 AT3G59350.2
AT3G59350.1
AT3G59350
Protein kinase superfamily protein
arTal_v1_Chr2_-_14489767_14489767 0.66 AT2G34340.1
AT2G34340
senescence regulator (Protein of unknown function, DUF584)
arTal_v1_Chr3_+_3857780_3857780 0.66 AT3G12110.1
ACT11
actin-11
arTal_v1_Chr5_-_21125065_21125065 0.66 AT5G52020.1
AT5G52020
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr2_+_17945662_17945662 0.66 AT2G43150.1
AT2G43150
Proline-rich extensin-like family protein
arTal_v1_Chr5_+_21811633_21811633 0.66 AT5G53740.1
AT5G53740
hypothetical protein
arTal_v1_Chr5_+_3783930_3783930 0.65 AT5G11740.1
AGP15
arabinogalactan protein 15
arTal_v1_Chr2_-_13272534_13272534 0.65 AT2G31141.1
AT2G31141.2
AT2G31141
hypothetical protein
arTal_v1_Chr2_+_7275657_7275657 0.65 AT2G16760.1
AT2G16760
Calcium-dependent phosphotriesterase superfamily protein
arTal_v1_Chr2_+_9810525_9810642 0.65 AT2G23050.2
AT2G23050.1
NPY4
Phototropic-responsive NPH3 family protein
arTal_v1_Chr3_-_6980523_6980523 0.65 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_-_25254318_25254318 0.65 AT5G62920.1
ARR6
response regulator 6
arTal_v1_Chr3_-_20276016_20276016 0.65 AT3G54770.1
AT3G54770.3
ARP1
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr3_-_10590685_10590685 0.65 AT3G28340.1
GATL10
galacturonosyltransferase-like 10
arTal_v1_Chr2_-_14373901_14373901 0.65 AT2G34020.1
AT2G34020.2
AT2G34020
Calcium-binding EF-hand family protein
arTal_v1_Chr1_-_24433165_24433165 0.65 AT1G65690.1
AT1G65690
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr2_+_19253670_19253670 0.65 AT2G46860.1
PPa3
pyrophosphorylase 3
arTal_v1_Chr1_-_473160_473336 0.65 AT1G02360.1
AT1G02360.2
AT1G02360.3
AT1G02360
Chitinase family protein
arTal_v1_Chr4_+_16614204_16614204 0.65 AT4G34870.1
ROC5
rotamase cyclophilin 5
arTal_v1_Chr1_+_2524023_2524023 0.64 AT1G08090.1
NRT2:1
nitrate transporter 2:1
arTal_v1_Chr3_+_7673276_7673276 0.64 AT3G21770.1
AT3G21770
Peroxidase superfamily protein
arTal_v1_Chr3_-_565801_565801 0.64 AT3G02640.1
AT3G02640
transmembrane protein
arTal_v1_Chr5_-_26129547_26129547 0.64 AT5G65390.1
AGP7
arabinogalactan protein 7
arTal_v1_Chr4_+_6836106_6836106 0.64 AT4G11211.1
AT4G11211
hypothetical protein
arTal_v1_Chr3_+_5535124_5535124 0.64 AT3G16330.1
AT3G16330
Avr9/Cf-9 rapidly elicited protein
arTal_v1_Chr5_-_19977620_19977620 0.64 AT5G49280.1
AT5G49280
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr1_+_29836644_29836644 0.64 AT1G79320.1
MC6
metacaspase 6
arTal_v1_Chr5_+_2132350_2132350 0.64 AT5G06860.1
PGIP1
polygalacturonase inhibiting protein 1
arTal_v1_Chr2_-_19268195_19268195 0.64 AT2G46890.1
AT2G46890
3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295)
arTal_v1_Chr4_-_5659574_5659574 0.63 AT4G08869.2
AT4G08869
Putative membrane lipoprotein
arTal_v1_Chr5_-_17421982_17421982 0.63 AT5G43380.1
AT5G43380.2
AT5G43380.3
TOPP6
type one serine/threonine protein phosphatase 6
arTal_v1_Chr4_+_16810482_16810482 0.63 AT4G35350.2
AT4G35350.1
XCP1
xylem cysteine peptidase 1
arTal_v1_Chr5_-_16413202_16413202 0.63 AT5G40960.1
AT5G40960
transmembrane protein, putative (DUF 3339)
arTal_v1_Chr5_-_23700226_23700226 0.63 AT5G58650.1
PSY1
plant peptide containing sulfated tyrosine 1
arTal_v1_Chr4_+_6869863_6869863 0.63 AT4G11290.1
AT4G11290
Peroxidase superfamily protein
arTal_v1_Chr5_-_17185032_17185032 0.63 AT5G42860.1
AT5G42860
late embryogenesis abundant protein, group 2

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G21890

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 0.6 GO:1901529 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.4 2.2 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.4 1.6 GO:0080003 thalianol metabolic process(GO:0080003)
0.4 1.1 GO:0015709 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.4 0.4 GO:0015744 succinate transport(GO:0015744)
0.3 1.3 GO:0019322 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.3 1.8 GO:0043090 amino acid import(GO:0043090)
0.3 1.5 GO:0072708 response to sorbitol(GO:0072708)
0.3 0.9 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.3 1.5 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.3 0.9 GO:0015802 basic amino acid transport(GO:0015802)
0.3 1.0 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.2 1.5 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.2 0.2 GO:0071280 cellular response to copper ion(GO:0071280)
0.2 0.2 GO:0032261 purine nucleotide salvage(GO:0032261) purine-containing compound salvage(GO:0043101)
0.2 0.7 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.2 0.9 GO:0006097 glyoxylate cycle(GO:0006097)
0.2 0.7 GO:0015783 GDP-fucose transport(GO:0015783)
0.2 0.2 GO:0010683 tricyclic triterpenoid metabolic process(GO:0010683)
0.2 1.8 GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning(GO:0060774)
0.2 1.4 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.2 0.9 GO:0006971 hypotonic response(GO:0006971)
0.2 1.0 GO:0007043 cell-cell junction assembly(GO:0007043)
0.2 0.2 GO:0071398 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.2 0.9 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.2 0.9 GO:0015824 proline transport(GO:0015824)
0.2 0.7 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.2 0.6 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.2 0.5 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.2 0.7 GO:1900912 negative regulation of ethylene biosynthetic process(GO:0010366) negative regulation of sulfur amino acid metabolic process(GO:0031336) negative regulation of cellular amine metabolic process(GO:0033239) negative regulation of cellular amino acid metabolic process(GO:0045763) negative regulation of sulfur metabolic process(GO:0051175) negative regulation of olefin metabolic process(GO:1900909) negative regulation of olefin biosynthetic process(GO:1900912)
0.2 0.4 GO:0010376 stomatal complex formation(GO:0010376)
0.2 0.7 GO:0001887 selenium compound metabolic process(GO:0001887)
0.2 0.7 GO:0010507 negative regulation of autophagy(GO:0010507)
0.2 1.2 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.2 3.4 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.2 0.5 GO:0006984 ER-nucleus signaling pathway(GO:0006984)
0.2 1.0 GO:1900458 negative regulation of brassinosteroid mediated signaling pathway(GO:1900458)
0.2 0.7 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.2 0.8 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.2 1.8 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.2 1.7 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.2 1.1 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.2 1.3 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.2 0.5 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.2 0.8 GO:0035627 ceramide transport(GO:0035627)
0.2 0.6 GO:0006065 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.2 0.6 GO:0006687 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.1 1.0 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.1 0.4 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.1 1.2 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 0.4 GO:0043181 vacuolar sequestering(GO:0043181)
0.1 2.9 GO:0010037 response to carbon dioxide(GO:0010037)
0.1 0.6 GO:0030417 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.1 0.6 GO:0019474 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.1 0.6 GO:0042989 sequestering of actin monomers(GO:0042989)
0.1 0.8 GO:0006531 aspartate metabolic process(GO:0006531)
0.1 0.5 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 0.6 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.1 0.5 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.1 0.2 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 0.8 GO:0048830 adventitious root development(GO:0048830)
0.1 1.0 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.1 0.6 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 0.7 GO:0016107 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.5 GO:2000692 negative regulation of seed maturation(GO:2000692)
0.1 0.1 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.1 0.5 GO:2001009 regulation of plant-type cell wall cellulose biosynthetic process(GO:2001009)
0.1 0.8 GO:0006552 leucine catabolic process(GO:0006552)
0.1 0.6 GO:0006169 adenosine salvage(GO:0006169) adenosine biosynthetic process(GO:0046086)
0.1 0.3 GO:0006474 N-terminal protein amino acid acetylation(GO:0006474) N-terminal peptidyl-methionine acetylation(GO:0017196)
0.1 1.2 GO:1901959 positive regulation of cutin biosynthetic process(GO:1901959)
0.1 0.3 GO:0034963 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.1 0.4 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.1 0.4 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.1 0.3 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.1 0.8 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.1 0.5 GO:0050810 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.1 0.3 GO:0035445 borate transmembrane transport(GO:0035445)
0.1 0.9 GO:0009435 NAD biosynthetic process(GO:0009435)
0.1 0.9 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.1 0.3 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 0.5 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.1 0.4 GO:0010351 lithium ion transport(GO:0010351)
0.1 0.1 GO:0033566 gamma-tubulin complex localization(GO:0033566)
0.1 0.4 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.1 1.9 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.1 0.5 GO:0071277 cellular response to calcium ion(GO:0071277)
0.1 0.3 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.1 0.5 GO:0010338 leaf formation(GO:0010338)
0.1 1.5 GO:0015865 purine nucleotide transport(GO:0015865)
0.1 1.2 GO:0052541 plant-type cell wall cellulose metabolic process(GO:0052541)
0.1 1.3 GO:0009113 purine nucleobase biosynthetic process(GO:0009113)
0.1 0.2 GO:0071731 response to nitric oxide(GO:0071731)
0.1 0.3 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.1 0.4 GO:0016139 glycoside catabolic process(GO:0016139)
0.1 0.9 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 0.2 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
0.1 0.4 GO:0048462 carpel formation(GO:0048462)
0.1 0.6 GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290)
0.1 1.4 GO:0048766 root hair initiation(GO:0048766)
0.1 0.4 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.1 3.5 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.1 0.4 GO:2001006 regulation of beta-glucan metabolic process(GO:0032950) regulation of beta-glucan biosynthetic process(GO:0032951) regulation of cellulose biosynthetic process(GO:2001006)
0.1 0.3 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.1 1.0 GO:0010466 negative regulation of peptidase activity(GO:0010466) regulation of peptidase activity(GO:0052547)
0.1 2.4 GO:0090333 regulation of stomatal closure(GO:0090333)
0.1 0.1 GO:1903340 positive regulation of secondary cell wall biogenesis(GO:1901348) positive regulation of cell wall organization or biogenesis(GO:1903340)
0.1 0.8 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 1.0 GO:0000304 response to singlet oxygen(GO:0000304)
0.1 0.4 GO:0009305 protein biotinylation(GO:0009305)
0.1 0.4 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.1 0.4 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.1 0.6 GO:0019264 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.1 0.3 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.1 0.3 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 1.1 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 1.4 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.1 0.3 GO:0009799 specification of symmetry(GO:0009799)
0.1 0.4 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.1 1.1 GO:0006862 nucleotide transport(GO:0006862)
0.1 0.5 GO:0070070 proton-transporting V-type ATPase complex assembly(GO:0070070)
0.1 0.3 GO:0070509 calcium ion import(GO:0070509)
0.1 0.8 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.1 0.3 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.1 1.1 GO:0002697 regulation of immune effector process(GO:0002697) regulation of defense response to virus(GO:0050688)
0.1 1.0 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.1 0.3 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.1 0.2 GO:0080026 response to indolebutyric acid(GO:0080026)
0.1 0.2 GO:0097468 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.1 0.7 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.1 0.6 GO:0045487 diterpenoid catabolic process(GO:0016103) terpenoid catabolic process(GO:0016115) gibberellin catabolic process(GO:0045487)
0.1 0.9 GO:0071668 cell wall assembly(GO:0070726) plant-type cell wall assembly(GO:0071668)
0.1 0.2 GO:0033240 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.1 0.4 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.1 0.5 GO:0000965 mitochondrial RNA 3'-end processing(GO:0000965)
0.1 1.0 GO:0006621 protein retention in ER lumen(GO:0006621)
0.1 0.9 GO:0006108 malate metabolic process(GO:0006108)
0.1 0.6 GO:0006183 GTP biosynthetic process(GO:0006183)
0.1 0.2 GO:0010045 response to nickel cation(GO:0010045)
0.1 0.6 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.1 0.4 GO:0009662 etioplast organization(GO:0009662)
0.1 0.8 GO:0032366 intracellular sterol transport(GO:0032366)
0.1 0.4 GO:0006567 threonine catabolic process(GO:0006567)
0.1 0.6 GO:0010233 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.1 0.4 GO:0006772 thiamine metabolic process(GO:0006772) thiamine-containing compound metabolic process(GO:0042723)
0.1 0.2 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 0.3 GO:0010432 bract development(GO:0010432)
0.1 0.3 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.1 0.6 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 0.4 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.8 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 1.0 GO:0010274 hydrotropism(GO:0010274)
0.1 1.0 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.1 0.3 GO:0048455 stamen formation(GO:0048455)
0.1 0.5 GO:0009445 putrescine metabolic process(GO:0009445) putrescine biosynthetic process(GO:0009446) putrescine biosynthetic process from arginine(GO:0033388)
0.1 0.7 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.1 0.6 GO:0098543 detection of bacterium(GO:0016045) detection of other organism(GO:0098543)
0.1 0.3 GO:0046208 spermine catabolic process(GO:0046208)
0.1 0.3 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.1 1.5 GO:0080155 regulation of fertilization(GO:0080154) regulation of double fertilization forming a zygote and endosperm(GO:0080155)
0.1 1.9 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.1 0.5 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.1 0.1 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.1 0.6 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 0.4 GO:0070141 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.1 0.3 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.1 0.2 GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000479)
0.1 0.8 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.1 0.6 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.1 0.4 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.1 1.1 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.1 0.6 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 3.3 GO:0009631 cold acclimation(GO:0009631)
0.1 0.4 GO:1990019 protein storage vacuole organization(GO:1990019)
0.1 0.7 GO:1902222 L-phenylalanine catabolic process(GO:0006559) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.1 0.1 GO:1990937 xylan acetylation(GO:1990937)
0.1 0.3 GO:0006449 regulation of translational termination(GO:0006449)
0.1 0.4 GO:0008216 spermidine metabolic process(GO:0008216)
0.1 0.1 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.1 0.1 GO:0009945 radial axis specification(GO:0009945)
0.1 3.0 GO:0006099 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.1 1.3 GO:0009556 microsporogenesis(GO:0009556)
0.1 0.4 GO:0008215 spermine biosynthetic process(GO:0006597) spermine metabolic process(GO:0008215)
0.1 3.1 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 0.6 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.1 0.6 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.9 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.1 0.2 GO:0010541 acropetal auxin transport(GO:0010541)
0.1 0.2 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.1 0.2 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.1 1.3 GO:0045492 xylan biosynthetic process(GO:0045492)
0.1 0.6 GO:0006558 L-phenylalanine metabolic process(GO:0006558) erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process(GO:1902221)
0.1 0.2 GO:0001193 maintenance of transcriptional fidelity during DNA-templated transcription elongation(GO:0001192) maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter(GO:0001193)
0.1 0.2 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.1 0.7 GO:0005987 sucrose catabolic process(GO:0005987)
0.1 0.3 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 0.3 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 0.3 GO:1900542 regulation of nucleotide metabolic process(GO:0006140) regulation of purine nucleotide metabolic process(GO:1900542)
0.1 0.5 GO:2001289 lipid X metabolic process(GO:2001289)
0.1 0.4 GO:0000967 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.1 0.2 GO:0033530 raffinose metabolic process(GO:0033530)
0.1 0.6 GO:0006490 oligosaccharide-lipid intermediate biosynthetic process(GO:0006490)
0.1 0.3 GO:0098659 sodium ion transmembrane transport(GO:0035725) sodium ion import(GO:0097369) inorganic cation import into cell(GO:0098659) sodium ion import across plasma membrane(GO:0098719) inorganic ion import into cell(GO:0099587) sodium ion import into cell(GO:1990118)
0.1 0.2 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.0 0.0 GO:0048359 mucilage metabolic process involved in seed coat development(GO:0048359)
0.0 0.1 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.0 0.2 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.0 0.2 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.0 0.1 GO:0006425 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.0 0.4 GO:0009554 megasporogenesis(GO:0009554)
0.0 0.6 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 0.2 GO:1900409 positive regulation of cellular response to oxidative stress(GO:1900409)
0.0 0.2 GO:0080187 floral organ senescence(GO:0080187)
0.0 1.1 GO:0008360 regulation of cell shape(GO:0008360)
0.0 0.1 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.0 0.7 GO:0046688 response to copper ion(GO:0046688)
0.0 0.5 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.9 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.1 GO:0051443 positive regulation of ubiquitin-protein transferase activity(GO:0051443)
0.0 0.2 GO:0045682 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.0 0.1 GO:0055089 fatty acid homeostasis(GO:0055089)
0.0 0.2 GO:0046786 viral replication complex formation and maintenance(GO:0046786)
0.0 0.8 GO:1902074 response to salt(GO:1902074)
0.0 1.8 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 1.0 GO:0043450 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 0.3 GO:0005513 detection of calcium ion(GO:0005513)
0.0 0.4 GO:0006308 DNA catabolic process(GO:0006308)
0.0 0.2 GO:0071431 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.0 0.1 GO:0010055 atrichoblast differentiation(GO:0010055)
0.0 1.9 GO:0009407 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.9 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.0 0.1 GO:0006000 fructose metabolic process(GO:0006000)
0.0 0.6 GO:0019471 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.3 GO:0009099 valine biosynthetic process(GO:0009099)
0.0 0.1 GO:0000492 box C/D snoRNP assembly(GO:0000492)
0.0 0.9 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.1 GO:0006348 chromatin silencing at telomere(GO:0006348)
0.0 1.0 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.4 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.1 GO:0006283 transcription-coupled nucleotide-excision repair(GO:0006283)
0.0 0.3 GO:0007021 tubulin complex assembly(GO:0007021)
0.0 0.3 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.0 0.1 GO:0018874 benzoate metabolic process(GO:0018874)
0.0 0.1 GO:0090207 regulation of triglyceride metabolic process(GO:0090207)
0.0 1.2 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 0.1 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.0 1.0 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 1.3 GO:0008643 carbohydrate transport(GO:0008643)
0.0 0.5 GO:0015693 magnesium ion transport(GO:0015693)
0.0 0.2 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.0 0.1 GO:0010353 response to trehalose(GO:0010353)
0.0 0.1 GO:0002215 defense response to nematode(GO:0002215)
0.0 0.1 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.0 0.1 GO:0080171 lytic vacuole organization(GO:0080171)
0.0 0.2 GO:1901568 icosanoid metabolic process(GO:0006690) fatty acid derivative metabolic process(GO:1901568)
0.0 0.4 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.0 0.5 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.0 1.1 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.5 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 0.3 GO:0036260 7-methylguanosine RNA capping(GO:0009452) RNA capping(GO:0036260)
0.0 0.2 GO:0002943 tRNA dihydrouridine synthesis(GO:0002943)
0.0 0.1 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.0 0.2 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.0 0.9 GO:0030091 protein repair(GO:0030091)
0.0 0.2 GO:0051096 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0 0.1 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.7 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.0 0.1 GO:1902534 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.0 0.4 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.0 0.2 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.1 GO:0046339 diacylglycerol metabolic process(GO:0046339)
0.0 0.4 GO:0015706 nitrate transport(GO:0015706)
0.0 0.6 GO:0019374 galactolipid metabolic process(GO:0019374)
0.0 1.0 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.1 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.0 0.1 GO:0031507 heterochromatin assembly(GO:0031507)
0.0 0.3 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 2.4 GO:0006869 lipid transport(GO:0006869)
0.0 2.3 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.5 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.0 0.2 GO:0032973 amino acid export(GO:0032973)
0.0 0.5 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.2 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.0 0.2 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.0 0.2 GO:0006915 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.0 0.2 GO:0035067 negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.0 0.1 GO:0007142 male meiosis II(GO:0007142)
0.0 0.4 GO:0006826 iron ion transport(GO:0006826)
0.0 4.3 GO:0009845 seed germination(GO:0009845)
0.0 0.1 GO:0048449 floral organ formation(GO:0048449)
0.0 1.7 GO:0009846 pollen germination(GO:0009846)
0.0 0.1 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 0.3 GO:0006513 protein monoubiquitination(GO:0006513)
0.0 0.2 GO:0019742 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.0 0.3 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 0.1 GO:0042040 molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040)
0.0 0.3 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.0 0.1 GO:2000036 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.0 0.4 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.0 0.2 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.0 0.1 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.1 GO:2000278 regulation of DNA biosynthetic process(GO:2000278)
0.0 0.1 GO:0045117 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.0 0.1 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.0 0.8 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.2 GO:0046348 aminoglycan metabolic process(GO:0006022) aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.2 GO:0015846 polyamine transport(GO:0015846)
0.0 0.1 GO:0009204 deoxyribonucleoside triphosphate catabolic process(GO:0009204) deoxyribose phosphate catabolic process(GO:0046386)
0.0 0.3 GO:0010205 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.0 0.2 GO:0043406 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.0 0.1 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.0 0.1 GO:0009413 response to flooding(GO:0009413)
0.0 0.1 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.0 0.2 GO:0006446 regulation of translational initiation(GO:0006446)
0.0 1.8 GO:0009664 plant-type cell wall organization(GO:0009664)
0.0 0.2 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.1 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.6 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.2 GO:0045116 protein neddylation(GO:0045116)
0.0 0.1 GO:0030100 regulation of endocytosis(GO:0030100)
0.0 0.1 GO:0035247 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) histone arginine methylation(GO:0034969) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.0 1.9 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.7 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.2 GO:0016553 base conversion or substitution editing(GO:0016553) cytidine to uridine editing(GO:0016554)
0.0 0.3 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.2 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 0.1 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.3 GO:0052542 defense response by callose deposition(GO:0052542)
0.0 0.2 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.0 0.0 GO:0046033 AMP metabolic process(GO:0046033)
0.0 0.1 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.0 0.1 GO:0000963 mitochondrial RNA processing(GO:0000963)
0.0 0.2 GO:0010262 somatic embryogenesis(GO:0010262)
0.0 0.1 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.0 0.4 GO:0065001 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.0 0.3 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 0.1 GO:0090202 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.0 0.1 GO:0035964 COPI-coated vesicle budding(GO:0035964) Golgi vesicle budding(GO:0048194) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.0 0.1 GO:0071266 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.0 0.2 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.1 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.0 0.3 GO:0015743 malate transport(GO:0015743)
0.0 0.3 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.0 0.1 GO:0016129 phytosteroid biosynthetic process(GO:0016129) brassinosteroid biosynthetic process(GO:0016132)
0.0 0.1 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.0 0.0 GO:0046125 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.0 0.0 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.0 0.4 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 0.1 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.0 0.1 GO:0046133 pyrimidine ribonucleoside catabolic process(GO:0046133) pyrimidine nucleoside catabolic process(GO:0046135)
0.0 0.1 GO:0034473 U1 snRNA 3'-end processing(GO:0034473) U5 snRNA 3'-end processing(GO:0034476) nuclear polyadenylation-dependent mRNA catabolic process(GO:0071042) polyadenylation-dependent mRNA catabolic process(GO:0071047)
0.0 0.3 GO:0042545 cell wall modification(GO:0042545)
0.0 0.4 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.6 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.1 GO:0010088 phloem development(GO:0010088)
0.0 0.2 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.1 GO:0043970 histone H3-K9 acetylation(GO:0043970)
0.0 0.6 GO:0030244 cellulose biosynthetic process(GO:0030244)
0.0 0.5 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.0 0.5 GO:0006413 translational initiation(GO:0006413)
0.0 0.1 GO:0019632 shikimate metabolic process(GO:0019632)
0.0 0.2 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.1 GO:0016093 polyprenol metabolic process(GO:0016093)
0.0 0.3 GO:0010496 intercellular transport(GO:0010496)
0.0 0.1 GO:1990414 replication-born double-strand break repair via sister chromatid exchange(GO:1990414)
0.0 0.1 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.0 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.0 0.1 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.0 GO:0046085 adenosine metabolic process(GO:0046085)
0.0 0.1 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.0 0.1 GO:0019310 inositol catabolic process(GO:0019310)
0.0 0.1 GO:0009704 de-etiolation(GO:0009704)
0.0 0.4 GO:0010582 floral meristem determinacy(GO:0010582)
0.0 0.2 GO:0010449 root meristem growth(GO:0010449)
0.0 0.1 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.0 0.2 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.4 GO:0099518 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.3 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.1 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.2 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.0 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 0.2 GO:0009686 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)
0.0 0.1 GO:0090114 COPII-coated vesicle budding(GO:0090114)
0.0 0.2 GO:0010876 lipid localization(GO:0010876)
0.0 0.2 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 0.0 GO:0048445 carpel morphogenesis(GO:0048445)
0.0 0.0 GO:1900370 positive regulation of RNA interference(GO:1900370)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.4 GO:0009514 glyoxysome(GO:0009514)
0.3 0.9 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.2 0.4 GO:0030897 HOPS complex(GO:0030897)
0.2 0.7 GO:0016461 unconventional myosin complex(GO:0016461)
0.1 0.6 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.1 0.6 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.1 0.4 GO:0031080 nuclear pore outer ring(GO:0031080)
0.1 0.9 GO:0005828 kinetochore microtubule(GO:0005828)
0.1 0.9 GO:0090395 plant cell papilla(GO:0090395)
0.1 0.3 GO:0031414 N-terminal protein acetyltransferase complex(GO:0031414) NatC complex(GO:0031417)
0.1 0.3 GO:0034703 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.1 0.6 GO:0072588 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.1 0.4 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.1 0.5 GO:0034426 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.1 1.3 GO:0071782 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.1 28.2 GO:0031225 anchored component of membrane(GO:0031225)
0.1 0.4 GO:0070505 pollen coat(GO:0070505)
0.1 0.3 GO:1990429 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.1 0.9 GO:0042555 MCM complex(GO:0042555)
0.1 0.4 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.1 0.3 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.1 0.7 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 3.2 GO:0005764 lysosome(GO:0005764)
0.1 0.9 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.1 0.3 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.1 0.2 GO:0009501 amyloplast(GO:0009501)
0.1 0.3 GO:0010330 cellulose synthase complex(GO:0010330)
0.1 0.6 GO:0000813 ESCRT I complex(GO:0000813)
0.1 0.1 GO:0000314 plastid small ribosomal subunit(GO:0000312) organellar small ribosomal subunit(GO:0000314)
0.1 0.6 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.1 0.7 GO:0048226 Casparian strip(GO:0048226)
0.1 0.2 GO:0005656 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.1 1.5 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.1 0.2 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.1 0.9 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.1 0.2 GO:0005775 vacuolar lumen(GO:0005775)
0.1 0.5 GO:0031012 extracellular matrix(GO:0031012)
0.1 1.0 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.1 0.3 GO:0071818 BAT3 complex(GO:0071818)
0.1 1.6 GO:0005811 lipid particle(GO:0005811)
0.1 1.7 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.4 GO:0035618 root hair(GO:0035618)
0.0 4.2 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.2 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.0 0.4 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 0.2 GO:0005905 clathrin-coated pit(GO:0005905)
0.0 0.2 GO:0000835 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.0 0.7 GO:0005769 early endosome(GO:0005769)
0.0 0.4 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0 0.2 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.0 0.4 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.3 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 0.2 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 0.1 GO:0071006 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.0 0.1 GO:0030130 trans-Golgi network transport vesicle membrane(GO:0012510) clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.0 0.9 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.2 GO:0034719 SMN-Sm protein complex(GO:0034719)
0.0 0.3 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.0 0.1 GO:0009897 external side of plasma membrane(GO:0009897)
0.0 1.0 GO:1903293 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 0.3 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 1.0 GO:0022624 proteasome regulatory particle(GO:0005838) proteasome accessory complex(GO:0022624)
0.0 0.1 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.0 0.2 GO:0005719 nuclear euchromatin(GO:0005719)
0.0 0.4 GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.0 2.7 GO:0042995 cell projection(GO:0042995)
0.0 0.3 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 15.7 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.4 GO:0045298 tubulin complex(GO:0045298)
0.0 0.2 GO:0044545 NSL complex(GO:0044545)
0.0 0.1 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.4 GO:0008180 COP9 signalosome(GO:0008180)
0.0 0.2 GO:0055038 recycling endosome membrane(GO:0055038)
0.0 0.4 GO:0045275 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 0.2 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.0 0.1 GO:0030126 COPI vesicle coat(GO:0030126) COPI-coated vesicle membrane(GO:0030663)
0.0 0.6 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.5 GO:0072686 mitotic spindle(GO:0072686)
0.0 0.3 GO:0071011 precatalytic spliceosome(GO:0071011)
0.0 0.5 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 3.4 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 1.4 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.2 GO:0071007 U2-type catalytic step 2 spliceosome(GO:0071007)
0.0 0.2 GO:0016272 prefoldin complex(GO:0016272)
0.0 0.2 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.0 5.3 GO:0048046 apoplast(GO:0048046)
0.0 0.1 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 1.3 GO:0005615 extracellular space(GO:0005615)
0.0 0.1 GO:0009346 citrate lyase complex(GO:0009346)
0.0 0.3 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 0.4 GO:0000145 exocyst(GO:0000145)
0.0 0.5 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.5 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.1 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 37.9 GO:0005576 extracellular region(GO:0005576)
0.0 0.1 GO:0030896 checkpoint clamp complex(GO:0030896)
0.0 0.2 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.2 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.1 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.0 1.3 GO:0005759 mitochondrial matrix(GO:0005759)
0.0 0.1 GO:0005845 mRNA cap binding complex(GO:0005845)
0.0 0.3 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 1.0 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.5 GO:0022626 cytosolic ribosome(GO:0022626)
0.0 0.1 GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain(GO:0033178)
0.0 0.1 GO:0000798 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.0 1.1 GO:0009705 plant-type vacuole membrane(GO:0009705)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.0 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.4 1.5 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.4 1.1 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.4 0.4 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.3 1.0 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.3 1.2 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.3 0.9 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.3 0.9 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.3 0.9 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.3 1.1 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.3 0.8 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.3 1.3 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.3 0.8 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.2 1.2 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457)
0.2 2.0 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.2 0.9 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.2 0.9 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.2 1.1 GO:0003680 AT DNA binding(GO:0003680)
0.2 0.7 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.2 0.9 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.2 0.6 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.2 2.3 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.2 0.6 GO:0009374 biotin binding(GO:0009374)
0.2 0.8 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.2 0.5 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.2 0.5 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.2 0.7 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.2 0.8 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.2 0.5 GO:0015119 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.2 1.4 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.2 1.0 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.2 0.5 GO:1901474 azole transmembrane transporter activity(GO:1901474)
0.2 3.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.2 0.5 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.2 0.8 GO:0046624 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.2 0.6 GO:0004348 glucosylceramidase activity(GO:0004348)
0.1 0.4 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.1 0.7 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 0.4 GO:0004788 thiamine diphosphokinase activity(GO:0004788) thiamine binding(GO:0030975)
0.1 0.3 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.1 0.7 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.6 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.1 0.6 GO:0004149 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.1 1.1 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.6 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.1 1.1 GO:0042299 lupeol synthase activity(GO:0042299)
0.1 0.7 GO:0003785 actin monomer binding(GO:0003785)
0.1 0.5 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 4.6 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.4 GO:0045430 chalcone isomerase activity(GO:0045430)
0.1 0.5 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.4 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.1 1.6 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.8 GO:0052655 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.8 GO:0016531 copper chaperone activity(GO:0016531)
0.1 0.4 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
0.1 0.6 GO:0008430 selenium binding(GO:0008430)
0.1 0.4 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.1 0.5 GO:0004385 guanylate kinase activity(GO:0004385)
0.1 0.4 GO:0047326 inositol-1,4,5-trisphosphate 6-kinase activity(GO:0000823) inositol tetrakisphosphate 3-kinase activity(GO:0000824) inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440) inositol tetrakisphosphate 5-kinase activity(GO:0047326)
0.1 0.9 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 0.6 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 0.8 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 0.4 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.1 0.6 GO:0004001 adenosine kinase activity(GO:0004001)
0.1 0.5 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.1 0.3 GO:0036009 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.1 0.4 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.1 0.3 GO:0015292 uniporter activity(GO:0015292)
0.1 0.4 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.1 0.9 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.1 0.6 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 1.6 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.1 0.2 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.1 1.0 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 1.6 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.1 0.7 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 2.0 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.5 GO:0042084 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.1 0.2 GO:0005402 sugar:proton symporter activity(GO:0005351) cation:sugar symporter activity(GO:0005402)
0.1 0.3 GO:0008517 folic acid transporter activity(GO:0008517)
0.1 0.5 GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity(GO:0015165)
0.1 0.6 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.1 0.3 GO:0019779 Atg8 activating enzyme activity(GO:0019779)
0.1 0.6 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.1 0.5 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.1 0.5 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 1.5 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.4 GO:0043765 T/G mismatch-specific endonuclease activity(GO:0043765)
0.1 0.4 GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity(GO:0004077) biotin-protein ligase activity(GO:0018271)
0.1 1.2 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.1 0.3 GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity(GO:0008963)
0.1 0.9 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.1 1.8 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 0.4 GO:0008732 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.1 1.9 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.1 0.4 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 0.5 GO:0004766 spermidine synthase activity(GO:0004766)
0.1 0.6 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 1.0 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 0.3 GO:0004775 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.1 0.3 GO:0071617 lysophospholipid acyltransferase activity(GO:0071617)
0.1 2.3 GO:0008810 cellulase activity(GO:0008810)
0.1 0.6 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.1 0.4 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 1.6 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 0.5 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.7 GO:0046923 ER retention sequence binding(GO:0046923)
0.1 0.3 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.1 0.8 GO:0016872 intramolecular lyase activity(GO:0016872)
0.1 0.2 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.1 5.8 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.1 1.0 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.2 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.1 0.2 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.1 0.4 GO:0034511 U3 snoRNA binding(GO:0034511)
0.1 0.4 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 0.7 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.1 0.5 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.1 0.2 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 0.2 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.1 2.8 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 0.3 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.1 0.8 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 0.2 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.1 1.9 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.2 GO:0045437 uridine nucleosidase activity(GO:0045437) ribosylpyrimidine nucleosidase activity(GO:0050263)
0.1 0.4 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.1 0.3 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.1 0.8 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.1 0.6 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 0.4 GO:0031177 phosphopantetheine binding(GO:0031177)
0.1 0.2 GO:0048030 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.1 0.7 GO:0016161 beta-amylase activity(GO:0016161)
0.1 0.5 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 0.2 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 0.5 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 0.2 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.1 0.7 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.1 0.5 GO:0000339 RNA cap binding(GO:0000339)
0.1 0.5 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.7 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.1 1.8 GO:0005179 hormone activity(GO:0005179)
0.1 0.8 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 0.2 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.1 0.2 GO:0032135 DNA insertion or deletion binding(GO:0032135)
0.1 0.8 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.1 0.2 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.1 0.2 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.1 0.3 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 3.7 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.1 0.6 GO:0008137 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.1 0.2 GO:0016882 cyclo-ligase activity(GO:0016882)
0.1 0.4 GO:0008022 protein C-terminus binding(GO:0008022)
0.1 0.6 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 0.3 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.6 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 0.4 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 6.9 GO:0009055 electron carrier activity(GO:0009055)
0.1 0.4 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.7 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.2 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 0.1 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.0 0.2 GO:0000150 recombinase activity(GO:0000150)
0.0 0.2 GO:0019172 glyoxalase III activity(GO:0019172)
0.0 0.2 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.0 0.2 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.0 0.3 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.0 0.2 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.7 GO:0030414 peptidase inhibitor activity(GO:0030414)
0.0 0.6 GO:0019798 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0 0.3 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.0 0.1 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
0.0 0.2 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.0 0.9 GO:0008514 organic anion transmembrane transporter activity(GO:0008514)
0.0 0.9 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.2 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.0 0.2 GO:0019534 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 1.6 GO:0050897 cobalt ion binding(GO:0050897)
0.0 0.2 GO:0048038 quinone binding(GO:0048038)
0.0 0.1 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.0 0.1 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.0 2.8 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.4 GO:0051184 cofactor transporter activity(GO:0051184)
0.0 1.2 GO:0051119 sugar transmembrane transporter activity(GO:0051119)
0.0 0.1 GO:0061134 peptidase regulator activity(GO:0061134)
0.0 0.2 GO:0030623 U5 snRNA binding(GO:0030623)
0.0 0.4 GO:0008083 growth factor activity(GO:0008083)
0.0 0.3 GO:0019825 oxygen binding(GO:0019825)
0.0 0.2 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.0 1.0 GO:0000295 adenine nucleotide transmembrane transporter activity(GO:0000295)
0.0 0.1 GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity(GO:0004571)
0.0 1.2 GO:0031593 polyubiquitin binding(GO:0031593)
0.0 0.3 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.1 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.0 0.1 GO:0003985 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.0 2.8 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.2 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.0 0.3 GO:0030151 molybdenum ion binding(GO:0030151)
0.0 2.1 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.2 GO:0035197 siRNA binding(GO:0035197)
0.0 0.2 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.0 0.4 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.1 GO:0019781 NEDD8 activating enzyme activity(GO:0019781)
0.0 0.5 GO:0000250 lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.0 0.3 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.3 GO:0008865 fructokinase activity(GO:0008865)
0.0 0.4 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.1 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.1 GO:0000309 nicotinamide-nucleotide adenylyltransferase activity(GO:0000309)
0.0 1.0 GO:0005496 steroid binding(GO:0005496)
0.0 0.5 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.5 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.6 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 0.5 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.2 GO:0010011 auxin binding(GO:0010011)
0.0 0.0 GO:0004031 aldehyde oxidase activity(GO:0004031)
0.0 0.2 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.0 2.4 GO:0019901 protein kinase binding(GO:0019901)
0.0 0.1 GO:0022840 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.0 1.2 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.3 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 0.1 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.1 GO:0070035 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.2 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.0 0.6 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.0 0.5 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.5 GO:0016844 strictosidine synthase activity(GO:0016844)
0.0 0.1 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.0 1.1 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.2 GO:0009824 AMP dimethylallyltransferase activity(GO:0009824)
0.0 0.3 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.0 0.7 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.1 GO:0000035 acyl binding(GO:0000035)
0.0 0.2 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.5 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.0 0.2 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.0 0.3 GO:0008375 acetylglucosaminyltransferase activity(GO:0008375)
0.0 0.2 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.4 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.2 GO:0010428 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.0 0.1 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.0 1.2 GO:0008234 cysteine-type peptidase activity(GO:0008234)
0.0 0.3 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 3.1 GO:0005507 copper ion binding(GO:0005507)
0.0 0.3 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.0 0.1 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.0 0.2 GO:0005253 anion channel activity(GO:0005253)
0.0 0.8 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.2 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.1 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.0 0.2 GO:0043495 protein anchor(GO:0043495)
0.0 1.9 GO:0016298 lipase activity(GO:0016298)
0.0 0.5 GO:0008143 poly(A) binding(GO:0008143)
0.0 0.1 GO:0047804 cystathionine beta-lyase activity(GO:0004121) cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.0 0.2 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.0 0.1 GO:0010485 H4 histone acetyltransferase activity(GO:0010485)
0.0 0.4 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.1 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.0 0.1 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.0 0.2 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.0 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.0 0.1 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.4 GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives(GO:0016857)
0.0 0.1 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.0 0.1 GO:0070003 threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.0 0.5 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 1.1 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.1 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.1 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.0 0.1 GO:0004792 thiosulfate sulfurtransferase activity(GO:0004792)
0.0 0.4 GO:0004568 chitinase activity(GO:0004568)
0.0 1.9 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.1 GO:0019788 NEDD8 transferase activity(GO:0019788)
0.0 0.3 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.1 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.0 0.0 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.0 0.0 GO:0016842 amidine-lyase activity(GO:0016842)
0.0 0.1 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.0 0.6 GO:0032182 ubiquitin-like protein binding(GO:0032182)
0.0 0.1 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.1 GO:0015245 fatty acid transporter activity(GO:0015245)
0.0 0.4 GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors(GO:0016706)
0.0 0.7 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.1 GO:0050113 inositol oxygenase activity(GO:0050113)
0.0 0.1 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 0.1 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.1 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.0 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.0 0.1 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.2 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.1 GO:0004594 pantothenate kinase activity(GO:0004594)
0.0 0.4 GO:0000146 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.0 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.0 0.6 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 3.1 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.3 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.2 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.0 0.0 GO:0004150 dihydroneopterin aldolase activity(GO:0004150)
0.0 0.1 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.6 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 0.3 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.0 0.1 GO:0070403 NAD+ binding(GO:0070403)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.4 NABA SECRETED FACTORS Genes encoding secreted soluble factors
0.3 2.3 PID CMYB PATHWAY C-MYB transcription factor network
0.3 0.9 PID IL12 2PATHWAY IL12-mediated signaling events
0.3 0.8 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.2 0.7 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.1 0.8 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.1 0.3 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.
0.1 0.2 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.3 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.1 0.3 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.1 0.7 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.1 0.1 PID TELOMERASE PATHWAY Regulation of Telomerase
0.1 0.1 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.0 0.1 PID RAS PATHWAY Regulation of Ras family activation
0.0 0.1 ST GRANULE CELL SURVIVAL PATHWAY Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway.
0.0 0.1 PID AP1 PATHWAY AP-1 transcription factor network
0.0 0.1 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.0 0.2 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.0 0.1 PID RAC1 PATHWAY RAC1 signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.8 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.2 1.1 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.2 0.8 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.2 0.5 REACTOME DEADENYLATION OF MRNA Genes involved in Deadenylation of mRNA
0.2 0.5 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.1 0.3 REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen
0.1 0.4 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.1 0.6 REACTOME PROLACTIN RECEPTOR SIGNALING Genes involved in Prolactin receptor signaling
0.1 0.5 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1 0.2 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.1 0.3 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.1 0.6 REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION Genes involved in Platelet activation, signaling and aggregation
0.1 0.4 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.1 0.5 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.3 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.1 0.3 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.1 REACTOME G1 PHASE Genes involved in G1 Phase
0.0 0.1 REACTOME LIPOPROTEIN METABOLISM Genes involved in Lipoprotein metabolism
0.0 0.0 REACTOME SIGNALING BY ERBB4 Genes involved in Signaling by ERBB4
0.0 0.1 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.0 0.1 REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC Genes involved in Formation of tubulin folding intermediates by CCT/TriC
0.0 0.5 REACTOME HEMOSTASIS Genes involved in Hemostasis
0.0 0.1 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.0 0.2 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.1 REACTOME SIGNALING BY THE B CELL RECEPTOR BCR Genes involved in Signaling by the B Cell Receptor (BCR)
0.0 0.1 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes