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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT3G52440

Z-value: 0.68

Transcription factors associated with AT3G52440

Gene Symbol Gene ID Gene Info
AT3G52440
AT3G52440 Dof-type zinc finger DNA-binding family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT3G52440arTal_v1_Chr3_+_19435447_19435447-0.126.9e-01Click!

Activity profile of AT3G52440 motif

Sorted Z-values of AT3G52440 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_+_9829261_9829261 2.00 AT1G28135.1
AT1G28135
hypothetical protein
arTal_v1_Chr5_-_19542760_19542760 0.95 AT5G48180.1
NSP5
nitrile specifier protein 5
arTal_v1_Chr2_-_7919345_7919345 0.94 AT2G18193.1
AT2G18193
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr2_+_18347765_18347765 0.92 AT2G44460.2
BGLU28
beta glucosidase 28
arTal_v1_Chr2_+_18346306_18346306 0.91 AT2G44460.1
BGLU28
beta glucosidase 28
arTal_v1_Chr1_+_28053030_28053030 0.85 AT1G74670.1
GASA6
Gibberellin-regulated family protein
arTal_v1_Chr5_-_8181107_8181107 0.82 AT5G24155.2
AT5G24155.3
AT5G24155.1
AT5G24155
FAD/NAD(P)-binding oxidoreductase family protein
arTal_v1_Chr1_+_16470872_16470872 0.81 AT1G43675.1
AT1G43675

arTal_v1_Chr5_+_19183523_19183571 0.80 AT5G47240.2
AT5G47240.1
NUDT8
nudix hydrolase homolog 8
arTal_v1_Chr2_-_1007186_1007186 0.75 AT2G03310.1
AT2G03310
transmembrane protein
arTal_v1_Chr3_+_22216540_22216540 0.72 AT3G60140.2
AT3G60140.1
DIN2
Glycosyl hydrolase superfamily protein
arTal_v1_Chr1_+_3066674_3066753 0.65 AT1G09500.1
AT1G09500.2
AT1G09500.3
AT1G09500
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_+_8395466_8395509 0.64 AT1G23730.2
AT1G23730.1
BCA3
beta carbonic anhydrase 3
arTal_v1_Chr2_+_13658888_13659004 0.64 AT2G32150.1
AT2G32150.2
AT2G32150.3
AT2G32150
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr3_+_16789780_16789780 0.62 AT3G45730.1
AT3G45730
hypothetical protein
arTal_v1_Chr2_-_15425129_15425129 0.61 AT2G36800.1
DOGT1
don-glucosyltransferase 1
arTal_v1_Chr1_-_25451051_25451051 0.60 AT1G67870.1
AT1G67870
glycine-rich protein
arTal_v1_Chr3_-_1774589_1774594 0.60 AT3G05936.1
AT3G05936.2
AT3G05936
hypothetical protein
arTal_v1_Chr1_-_30404713_30404713 0.60 AT1G80920.1
J8
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr3_+_22922550_22922550 0.59 AT3G61898.1
AT3G61898
transmembrane protein
arTal_v1_Chr4_-_468294_468294 0.59 AT4G01080.1
TBL26
TRICHOME BIREFRINGENCE-LIKE 26
arTal_v1_Chr4_-_9393650_9393650 0.59 AT4G16690.1
MES16
methyl esterase 16
arTal_v1_Chr5_-_14123362_14123362 0.57 AT5G35970.1
AT5G35970
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr3_-_16534265_16534265 0.57 AT3G45160.1
AT3G45160
Putative membrane lipoprotein
arTal_v1_Chr3_-_8890927_8890927 0.57 AT3G24460.1
AT3G24460
Serinc-domain containing serine and sphingolipid biosynthesis protein
arTal_v1_Chr5_+_3124568_3124568 0.57 AT5G09990.1
PROPEP5
elicitor peptide 5 precursor
arTal_v1_Chr3_-_6350832_6350832 0.56 AT3G18490.1
ASPG1
Eukaryotic aspartyl protease family protein
arTal_v1_Chr2_+_3618058_3618058 0.56 AT2G08986.1
AT2G08986
hypothetical protein
arTal_v1_Chr2_-_1339468_1339468 0.55 AT2G04050.1
AT2G04050
MATE efflux family protein
arTal_v1_Chr3_+_8383331_8383331 0.52 AT3G23410.2
FAO3
fatty alcohol oxidase 3
arTal_v1_Chr2_+_10995095_10995095 0.51 AT2G25780.1
AT2G25780
hypothetical protein (DUF1677)
arTal_v1_Chr2_+_10559173_10559173 0.51 AT2G24762.1
GDU4
glutamine dumper 4
arTal_v1_Chr1_-_7900335_7900335 0.51 AT1G22370.1
AT1G22370.2
UGT85A5
UDP-glucosyl transferase 85A5
arTal_v1_Chr1_-_28530923_28530923 0.50 AT1G76010.2
AT1G76010
Alba DNA/RNA-binding protein
arTal_v1_Chr1_-_27788658_27788658 0.50 AT1G73890.1
AT1G73890
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr4_-_8004139_8004284 0.49 AT4G13800.10
AT4G13800.9
AT4G13800.4
AT4G13800.5
AT4G13800
magnesium transporter NIPA (DUF803)
arTal_v1_Chr3_+_4810888_4810888 0.49 AT3G14395.1
AT3G14395
hypothetical protein
arTal_v1_Chr1_-_28531771_28531771 0.49 AT1G76010.1
AT1G76010
Alba DNA/RNA-binding protein
arTal_v1_Chr1_-_27456949_27456949 0.49 AT1G72980.1
LBD7
LOB domain-containing protein 7
arTal_v1_Chr4_+_6314755_6314774 0.49 AT4G10120.4
AT4G10120.2
ATSPS4F
Sucrose-phosphate synthase family protein
arTal_v1_Chr3_-_1763348_1763348 0.49 AT3G05900.2
AT3G05900
neurofilament protein-like protein
arTal_v1_Chr2_-_10155699_10155699 0.49 AT2G23840.1
AT2G23840
HNH endonuclease
arTal_v1_Chr4_+_6313914_6313914 0.48 AT4G10120.1
AT4G10120.3
ATSPS4F
Sucrose-phosphate synthase family protein
arTal_v1_Chr5_+_1309099_1309193 0.47 AT5G04560.3
AT5G04560.2
AT5G04560.1
DME
HhH-GPD base excision DNA repair family protein
arTal_v1_Chr1_-_2607337_2607337 0.47 AT1G08270.1
AT1G08270
vacuolar protein sorting-associated protein
arTal_v1_Chr2_-_152827_152827 0.47 AT2G01310.1
AT2G01310
hypothetical protein
arTal_v1_Chr1_-_29537417_29537482 0.46 AT1G78510.2
AT1G78510.1
SPS1
solanesyl diphosphate synthase 1
arTal_v1_Chr2_-_6493512_6493512 0.46 AT2G15020.1
AT2G15020
hypothetical protein
arTal_v1_Chr1_+_3832563_3832563 0.46 AT1G11380.1
AT1G11380
PLAC8 family protein
arTal_v1_Chr4_-_12745352_12745352 0.46 AT4G24700.1
AT4G24700
hypothetical protein
arTal_v1_Chr3_+_8382672_8382672 0.46 AT3G23410.1
FAO3
fatty alcohol oxidase 3
arTal_v1_Chr4_+_6315951_6315951 0.46 AT4G10120.5
ATSPS4F
Sucrose-phosphate synthase family protein
arTal_v1_Chr3_-_20086967_20086967 0.46 AT3G54260.1
TBL36
TRICHOME BIREFRINGENCE-LIKE 36
arTal_v1_Chr3_+_5588459_5588486 0.46 AT3G16450.3
AT3G16450.1
JAL33
Mannose-binding lectin superfamily protein
arTal_v1_Chr3_+_5588292_5588292 0.45 AT3G16450.2
JAL33
Mannose-binding lectin superfamily protein
arTal_v1_Chr1_-_28024860_28024860 0.45 AT1G74590.1
GSTU10
glutathione S-transferase TAU 10
arTal_v1_Chr2_+_18991171_18991171 0.45 AT2G46250.2
AT2G46250.1
AT2G46250
myosin heavy chain-like protein
arTal_v1_Chr2_+_15050677_15050677 0.44 AT2G35820.1
AT2G35820
ureidoglycolate hydrolase
arTal_v1_Chr3_-_1763984_1763984 0.43 AT3G05900.1
AT3G05900
neurofilament protein-like protein
arTal_v1_Chr3_-_16479559_16479559 0.43 AT3G45060.1
NRT2.6
high affinity nitrate transporter 2.6
arTal_v1_Chr2_+_18333370_18333370 0.43 AT2G44430.1
AT2G44430
DNA-binding bromodomain-containing protein
arTal_v1_Chr3_-_21008064_21008068 0.43 AT3G56710.1
AT3G56710.2
SIB1
sigma factor binding protein 1
arTal_v1_Chr4_+_9965742_9965742 0.42 AT4G17940.1
AT4G17940
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr2_+_15050498_15050498 0.42 AT2G35820.2
AT2G35820
ureidoglycolate hydrolase
arTal_v1_Chr5_-_7373259_7373259 0.42 AT5G22270.1
AT5G22270
hypothetical protein
arTal_v1_Chr4_-_8004509_8004509 0.42 AT4G13800.8
AT4G13800.7
AT4G13800.6
AT4G13800
magnesium transporter NIPA (DUF803)
arTal_v1_Chr4_-_15507176_15507312 0.42 AT4G32070.2
AT4G32070.1
Phox4
Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
arTal_v1_Chr1_-_25839541_25839541 0.42 AT1G68790.1
LINC3
little nuclei3
arTal_v1_Chr1_-_27466348_27466348 0.42 AT1G73010.1
PS2
inorganic pyrophosphatase 1
arTal_v1_Chr4_-_17044555_17044599 0.42 AT4G36020.3
AT4G36020.1
AT4G36020.2
CSDP1
cold shock domain protein 1
arTal_v1_Chr2_-_761013_761064 0.42 AT2G02710.2
AT2G02710.3
AT2G02710.4
AT2G02710.1
PLPB
PAS/LOV protein B
arTal_v1_Chr2_-_15585186_15585302 0.42 AT2G37080.3
AT2G37080.2
AT2G37080.1
RIP2
ROP interactive partner 3
arTal_v1_Chr2_-_9906032_9906032 0.41 AT2G23290.1
MYB70
myb domain protein 70
arTal_v1_Chr4_-_13435723_13435770 0.41 AT4G26630.2
AT4G26630.1
AT4G26630
DEK domain-containing chromatin associated protein
arTal_v1_Chr1_+_24354646_24354771 0.41 AT1G65490.2
AT1G65490.3
AT1G65490.1
AT1G65490
transmembrane protein
arTal_v1_Chr3_+_3474922_3474922 0.41 AT3G11090.1
LBD21
LOB domain-containing protein 21
arTal_v1_Chr3_+_20978901_20978901 0.41 AT3G56630.1
CYP94D2
cytochrome P450, family 94, subfamily D, polypeptide 2
arTal_v1_Chr3_+_8918267_8918267 0.41 AT3G24500.1
MBF1C
multiprotein bridging factor 1C
arTal_v1_Chr1_-_5631088_5631088 0.41 AT1G16490.1
MYB58
myb domain protein 58
arTal_v1_Chr4_-_14002069_14002124 0.40 AT4G28250.2
AT4G28250.3
AT4G28250.4
AT4G28250.1
EXPB3
expansin B3
arTal_v1_Chr3_+_8918679_8918679 0.40 AT3G24500.2
MBF1C
multiprotein bridging factor 1C
arTal_v1_Chr4_-_17437065_17437217 0.40 AT4G36980.4
AT4G36980.3
AT4G36980.1
AT4G36980.2
AT4G36980
CLK4-associating serine/arginine-rich protein
arTal_v1_Chr1_-_2747936_2747967 0.40 AT1G08630.6
AT1G08630.7
AT1G08630.5
AT1G08630.2
THA1
threonine aldolase 1
arTal_v1_Chr4_-_8004767_8004767 0.40 AT4G13800.3
AT4G13800.1
AT4G13800.2
AT4G13800
magnesium transporter NIPA (DUF803)
arTal_v1_Chr1_-_12840997_12841118 0.40 AT1G35110.1
AT1G35112.1
AT1G35110
SADHU2-1


arTal_v1_Chr3_+_59423_59423 0.39 AT3G01175.1
AT3G01175
transmembrane protein
arTal_v1_Chr1_-_4358894_4358894 0.39 AT1G12780.1
UGE1
UDP-D-glucose/UDP-D-galactose 4-epimerase 1
arTal_v1_Chr2_-_13717002_13717002 0.39 AT2G32290.1
BAM6
beta-amylase 6
arTal_v1_Chr3_-_9580086_9580113 0.39 AT3G26180.2
AT3G26180.1
CYP71B20
cytochrome P450, family 71, subfamily B, polypeptide 20
arTal_v1_Chr5_+_25286177_25286177 0.39 AT5G63030.1
GRXC1
Thioredoxin superfamily protein
arTal_v1_Chr2_-_1040184_1040184 0.39 AT2G03440.1
NRP1
nodulin-related protein 1
arTal_v1_Chr1_-_17285749_17285749 0.39 AT1G47128.1
RD21A
Granulin repeat cysteine protease family protein
arTal_v1_Chr5_+_5924372_5924372 0.39 AT5G17900.1
AT5G17900
microfibrillar-associated protein-like protein
arTal_v1_Chr3_-_20769324_20769410 0.39 AT3G55970.2
AT3G55970.1
JRG21
jasmonate-regulated gene 21
arTal_v1_Chr4_-_1062159_1062159 0.39 AT4G02410.1
AT4G02410
Concanavalin A-like lectin protein kinase family protein
arTal_v1_Chr2_+_18276152_18276152 0.38 AT2G44200.1
AT2G44200
pre-mRNA splicing factor domain-containing protein
arTal_v1_Chr1_-_19690589_19690589 0.37 AT1G52880.1
NAM
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
arTal_v1_Chr3_+_11252807_11252807 0.37 AT3G29320.1
PHS1
Glycosyl transferase, family 35
arTal_v1_Chr5_+_8773734_8773792 0.37 AT5G25280.1
AT5G25280.3
AT5G25280.2
AT5G25280
serine-rich protein-like protein
arTal_v1_Chr1_+_21887588_21887588 0.37 AT1G59590.1
ZCF37
ZCF37
arTal_v1_Chr1_-_10326848_10326848 0.37 AT1G29530.1
AT1G29530
hypothetical protein
arTal_v1_Chr5_+_8515200_8515200 0.37 AT5G24800.1
BZIP9
basic leucine zipper 9
arTal_v1_Chr1_+_24468770_24468804 0.37 AT1G65790.2
AT1G65790.1
AT1G65790.3
RK1
receptor kinase 1
arTal_v1_Chr1_-_4526204_4526204 0.37 AT1G13245.1
RTFL17
ROTUNDIFOLIA like 17
arTal_v1_Chr3_-_1832190_1832190 0.37 AT3G06070.1
AT3G06070
hypothetical protein
arTal_v1_Chr2_+_16507882_16507882 0.37 AT2G39570.1
ACR9
ACT domain-containing protein
arTal_v1_Chr1_-_11759324_11759324 0.36 AT1G32520.1
AT1G32520
TLDc domain protein
arTal_v1_Chr1_-_1647147_1647147 0.36 AT1G05560.1
UGT75B1
UDP-glucosyltransferase 75B1
arTal_v1_Chr1_-_11872926_11872926 0.36 AT1G32780.1
AT1G32780
GroES-like zinc-binding dehydrogenase family protein
arTal_v1_Chr3_+_229075_229075 0.36 AT3G01600.1
NAC044
NAC domain containing protein 44
arTal_v1_Chr1_+_3951553_3951553 0.36 AT1G11720.1
SS3
starch synthase 3
arTal_v1_Chr3_-_5402652_5402653 0.36 AT3G15950.2
AT3G15950.1
AT3G15950.3
AT3G15950.4
AT3G15950.5
NAI2
DNA topoisomerase-like protein
arTal_v1_Chr4_-_15918044_15918153 0.36 AT4G32980.2
AT4G32980.1
ATH1
homeobox protein ATH1
arTal_v1_Chr3_+_20636607_20636674 0.36 AT3G55630.4
AT3G55630.3
AT3G55630.1
AT3G55630.2
AT3G55630.6
AT3G55630.5
DFD
DHFS-FPGS homolog D
arTal_v1_Chr3_-_1855063_1855197 0.36 AT3G06130.2
AT3G06130.1
AT3G06130
Heavy metal transport/detoxification superfamily protein
arTal_v1_Chr4_-_7736745_7736745 0.36 AT4G13280.1
AT4G13280.2
TPS12
terpenoid synthase 12
arTal_v1_Chr1_+_24097913_24097913 0.36 AT1G64860.2
SIGA
sigma factor A
arTal_v1_Chr3_-_19963980_19963980 0.36 AT3G53920.2
AT3G53920.1
SIGC
RNApolymerase sigma-subunit C
arTal_v1_Chr1_+_8168443_8168443 0.36 AT1G23050.1
AT1G23050
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr1_+_3951366_3951366 0.36 AT1G11720.2
SS3
starch synthase 3
arTal_v1_Chr5_+_25939562_25939562 0.36 AT5G64905.1
PROPEP3
elicitor peptide 3 precursor
arTal_v1_Chr1_+_24097736_24097736 0.36 AT1G64860.1
SIGA
sigma factor A
arTal_v1_Chr4_-_13729002_13729002 0.36 AT4G27450.1
AT4G27450
aluminum induced protein with YGL and LRDR motifs
arTal_v1_Chr3_+_18465318_18465318 0.36 AT3G49780.1
PSK4
phytosulfokine 4 precursor
arTal_v1_Chr1_-_8310916_8310916 0.36 AT1G23390.1
AT1G23390
Kelch repeat-containing F-box family protein
arTal_v1_Chr1_+_7823066_7823066 0.35 AT1G22160.1
AT1G22160
senescence-associated family protein (DUF581)
arTal_v1_Chr5_-_315405_315405 0.35 AT5G01820.1
SR1
serine/threonine protein kinase 1
arTal_v1_Chr1_-_1702749_1702749 0.35 AT1G05675.1
AT1G05675
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr4_-_15424265_15424311 0.35 AT4G31880.2
AT4G31880.1
AT4G31880
transcriptional regulator
arTal_v1_Chr1_-_1647435_1647435 0.35 AT1G05560.2
UGT75B1
UDP-glucosyltransferase 75B1
arTal_v1_Chr4_-_13307822_13307822 0.35 AT4G26290.1
AT4G26290
hypothetical protein
arTal_v1_Chr1_+_4159227_4159265 0.34 AT1G12250.1
AT1G12250.3
AT1G12250.2
AT1G12250
Pentapeptide repeat-containing protein
arTal_v1_Chr5_+_25444575_25444613 0.34 AT5G63550.1
AT5G63550.2
AT5G63550
DEK domain-containing chromatin associated protein
arTal_v1_Chr1_-_10942292_10942292 0.34 AT1G30810.2
AT1G30810.3
JMJ18
Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
arTal_v1_Chr5_-_6850237_6850237 0.34 AT5G20280.1
SPS1F
sucrose phosphate synthase 1F
arTal_v1_Chr5_+_1130031_1130031 0.34 AT5G04140.2
GLU1
glutamate synthase 1
arTal_v1_Chr3_-_6617951_6617951 0.34 AT3G19150.3
AT3G19150.1
KRP6
KIP-related protein 6
arTal_v1_Chr4_-_6224221_6224221 0.34 AT4G09900.1
MES12
methyl esterase 12
arTal_v1_Chr5_+_1129785_1129785 0.34 AT5G04140.1
GLU1
glutamate synthase 1
arTal_v1_Chr1_-_9935264_9935440 0.34 AT1G28330.3
AT1G28330.2
AT1G28330.4
AT1G28330.1
AT1G28330.6
AT1G28330.5
DYL1
dormancy-associated protein-like 1
arTal_v1_Chr1_-_29909332_29909332 0.33 AT1G79510.1
AT1G79510
hypothetical protein (DUF2358)
arTal_v1_Chr3_-_4201734_4201734 0.33 AT3G13080.1
AT3G13080.5
ABCC3
multidrug resistance-associated protein 3
arTal_v1_Chr3_-_4201265_4201265 0.33 AT3G13080.2
AT3G13080.4
AT3G13080.3
ABCC3
multidrug resistance-associated protein 3
arTal_v1_Chr4_-_13618835_13618835 0.33 AT4G27180.2
ATK2
kinesin 2
arTal_v1_Chr1_+_8540838_8540838 0.33 AT1G24145.1
AT1G24145
transmembrane protein
arTal_v1_Chr5_-_21180474_21180474 0.33 AT5G52120.1
PP2-A14
phloem protein 2-A14
arTal_v1_Chr1_-_2607507_2607507 0.33 AT1G08270.2
AT1G08270
vacuolar protein sorting-associated protein
arTal_v1_Chr2_-_13691155_13691155 0.33 AT2G32240.1
AT2G32240
early endosome antigen
arTal_v1_Chr1_+_20182581_20182581 0.33 AT1G54070.1
AT1G54070
Dormancy/auxin associated family protein
arTal_v1_Chr5_-_4775833_4775833 0.33 AT5G14770.3
AT5G14770.1
AT5G14770.5
AT5G14770.4
AT5G14770.2
AT5G14770
PPR repeat protein
arTal_v1_Chr1_+_11688129_11688129 0.33 AT1G32390.1
AT1G32390

arTal_v1_Chr2_-_10285012_10285098 0.33 AT2G24190.2
AT2G24190.1
SDR2
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr2_+_12671206_12671206 0.33 AT2G29640.1
JOSL
JOSEPHIN-like protein
arTal_v1_Chr3_+_3442237_3442237 0.32 AT3G10985.1
SAG20
senescence associated gene 20
arTal_v1_Chr1_-_8315876_8315876 0.32 AT1G23400.1
CAF2
RNA-binding CRS1 / YhbY (CRM) domain-containing protein
arTal_v1_Chr5_-_23873691_23873849 0.32 AT5G59130.1
AT5G59130.2
AT5G59130.3
AT5G59130.4
AT5G59130
Subtilase family protein
arTal_v1_Chr5_+_21721667_21721822 0.32 AT5G53486.1
AT5G53486.4
AT5G53486.2
AT5G53486.5
AT5G53486.3
AT5G53486
transmembrane protein
arTal_v1_Chr1_+_28163344_28163344 0.32 AT1G75000.1
AT1G75000
GNS1/SUR4 membrane protein family
arTal_v1_Chr4_+_6587521_6587521 0.32 AT4G10680.1
AT4G10680
transcription factor IIB (TFIIB) family protein
arTal_v1_Chr1_-_27031461_27031461 0.32 AT1G71866.1
AT1G71866.2
AT1G71866
EPIDERMAL PATTERNING FACTOR-like protein
arTal_v1_Chr1_+_4130396_4130396 0.32 AT1G12180.1
AT1G12180
14.7 kDa heat shock-like protein
arTal_v1_Chr4_+_8475101_8475221 0.32 AT4G14760.3
AT4G14760.1
NET1B
kinase interacting (KIP1-like) family protein
arTal_v1_Chr4_-_15903523_15903523 0.32 AT4G32940.1
GAMMA-VPE
gamma vacuolar processing enzyme
arTal_v1_Chr1_+_21902264_21902284 0.32 AT1G59620.1
AT1G59620.2
CW9
Disease resistance protein (CC-NBS-LRR class) family
arTal_v1_Chr5_-_26804249_26804271 0.32 AT5G67180.1
AT5G67180.3
AT5G67180.4
AT5G67180.2
TOE3
target of early activation tagged (EAT) 3
arTal_v1_Chr5_+_21505074_21505074 0.32 AT5G53030.1
AT5G53030.2
AT5G53030
hypothetical protein
arTal_v1_Chr3_-_3282131_3282131 0.32 AT3G10525.1
LGO
LOSS OF GIANT CELLS FROM ORGANS
arTal_v1_Chr4_-_7243228_7243228 0.32 AT4G12090.1
AT4G12090
Cornichon family protein
arTal_v1_Chr5_+_15551243_15551243 0.32 AT5G38840.1
AT5G38840
SMAD/FHA domain-containing protein
arTal_v1_Chr3_+_20278798_20278954 0.32 AT3G54780.4
AT3G54780.5
AT3G54780.3
AT3G54780.2
AT3G54780.1
AT3G54780
Zinc finger (C3HC4-type RING finger) family protein
arTal_v1_Chr1_-_11762635_11762635 0.31 AT1G32530.1
AT1G32530
RING/U-box superfamily protein
arTal_v1_Chr1_-_24963946_24963946 0.31 AT1G66910.1
AT1G66910.2
AT1G66910
Protein kinase superfamily protein
arTal_v1_Chr3_-_19453212_19453212 0.31 AT3G52480.1
AT3G52480
transmembrane protein
arTal_v1_Chr1_-_29909988_29909988 0.31 AT1G79510.2
AT1G79510
hypothetical protein (DUF2358)
arTal_v1_Chr3_-_3971921_3972135 0.31 AT3G12520.2
AT3G12520.3
AT3G12520.1
SULTR4%3B2
sulfate transporter 4;2
arTal_v1_Chr1_-_5243262_5243262 0.31 AT1G15230.1
AT1G15230
hypothetical protein
arTal_v1_Chr4_-_13619312_13619312 0.31 AT4G27180.1
ATK2
kinesin 2
arTal_v1_Chr1_-_711857_711857 0.31 AT1G03055.1
AT1G03055.2
D27
beta-carotene isomerase D27-like protein
arTal_v1_Chr1_+_826523_826569 0.31 AT1G03365.1
AT1G03365.2
AT1G03365
RING/U-box superfamily protein
arTal_v1_Chr3_-_2329926_2329926 0.31 AT3G07310.2
AT3G07310.1
AT3G07310
phosphoserine aminotransferase, putative (DUF760)
arTal_v1_Chr4_+_8883825_8883825 0.31 AT4G15560.1
CLA1
Deoxyxylulose-5-phosphate synthase
arTal_v1_Chr5_+_16693832_16693845 0.31 AT5G41750.1
AT5G41750.2
AT5G41750
Disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr5_-_9077379_9077379 0.31 AT5G25990.1
AT5G25990
core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
arTal_v1_Chr2_+_10992728_10992780 0.31 AT2G25770.1
AT2G25770.2
AT2G25770
Polyketide cyclase/dehydrase and lipid transport superfamily protein
arTal_v1_Chr5_+_15634444_15634444 0.31 AT5G39050.1
PMAT1
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_-_20518815_20518815 0.31 AT5G50380.1
EXO70F1
exocyst subunit exo70 family protein F1
arTal_v1_Chr5_-_21767013_21767013 0.30 AT5G53580.1
PLR1
NAD(P)-linked oxidoreductase superfamily protein
arTal_v1_Chr3_+_5081780_5081908 0.30 AT3G15095.2
AT3G15095.1
AT3G15095.3
HCF243
Serine/Threonine-kinase pakA-like protein
arTal_v1_Chr5_+_26952341_26952341 0.30 AT5G67570.1
DG1
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr4_-_12725637_12725637 0.30 AT4G24660.2
HB22
homeobox protein 22
arTal_v1_Chr3_-_6650199_6650199 0.30 AT3G19200.1
AT3G19200
hypothetical protein
arTal_v1_Chr2_+_14604712_14604712 0.30 AT2G34660.3
ABCC2
multidrug resistance-associated protein 2
arTal_v1_Chr3_+_18040675_18040675 0.30 AT3G48710.1
AT3G48710
DEK domain-containing chromatin associated protein
arTal_v1_Chr5_+_15578749_15578763 0.30 AT5G38910.2
AT5G38910.1
AT5G38910
RmlC-like cupins superfamily protein
arTal_v1_Chr4_+_15617361_15617466 0.30 AT4G32350.1
AT4G32350.2
AT4G32350.3
AT4G32350
Regulator of Vps4 activity in the MVB pathway protein
arTal_v1_Chr5_+_18974022_18974022 0.30 AT5G46760.1
MYC3
Basic helix-loop-helix (bHLH) DNA-binding family protein
arTal_v1_Chr4_-_16908357_16908357 0.30 AT4G35640.1
SERAT3%3B2
serine acetyltransferase 3;2
arTal_v1_Chr3_-_5491332_5491332 0.30 AT3G16190.1
AT3G16190
Isochorismatase family protein
arTal_v1_Chr2_-_8706900_8707009 0.30 AT2G20180.5
AT2G20180.4
AT2G20180.8
AT2G20180.2
AT2G20180.1
AT2G20180.7
AT2G20180.6
AT2G20180.3
PIL5
phytochrome interacting factor 3-like 5
arTal_v1_Chr1_+_9178212_9178212 0.30 AT1G26560.1
BGLU40
beta glucosidase 40

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G52440

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0071461 cellular response to redox state(GO:0071461)
0.2 1.0 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.2 0.7 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.2 0.7 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.2 0.7 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.2 0.3 GO:0035264 multicellular organism growth(GO:0035264)
0.1 0.7 GO:0019419 sulfate reduction(GO:0019419)
0.1 0.4 GO:1903889 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.1 0.4 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.1 0.5 GO:0046068 cGMP biosynthetic process(GO:0006182) cGMP metabolic process(GO:0046068)
0.1 1.0 GO:0042851 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.1 0.4 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 0.7 GO:0006567 threonine catabolic process(GO:0006567)
0.1 0.6 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.1 0.3 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.1 0.3 GO:2000029 regulation of proanthocyanidin biosynthetic process(GO:2000029)
0.1 0.5 GO:0005980 glycogen catabolic process(GO:0005980)
0.1 0.5 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system(GO:0010201)
0.1 0.7 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.1 0.5 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.1 0.5 GO:0010271 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.1 0.9 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.1 0.6 GO:0019676 ammonia assimilation cycle(GO:0019676)
0.1 0.3 GO:1904580 regulation of intracellular mRNA localization(GO:1904580)
0.1 0.5 GO:1903960 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of ion transport(GO:0043271) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.1 0.4 GO:0080119 ER body organization(GO:0080119)
0.1 0.6 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 1.0 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 0.4 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.3 GO:0071836 nectar secretion(GO:0071836)
0.1 0.3 GO:0010377 guard cell fate commitment(GO:0010377) response to low humidity(GO:0090547)
0.1 0.3 GO:0006751 glutathione catabolic process(GO:0006751)
0.1 1.1 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.1 3.2 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 0.2 GO:1904062 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.1 0.2 GO:0090058 metaxylem development(GO:0090058)
0.1 0.5 GO:0015837 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.1 1.0 GO:0009750 response to fructose(GO:0009750)
0.1 0.3 GO:0034367 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.1 0.2 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.1 0.3 GO:0009558 embryo sac cellularization(GO:0009558)
0.1 0.2 GO:1901654 response to ketone(GO:1901654)
0.1 0.5 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.1 0.7 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.1 0.1 GO:0009270 response to humidity(GO:0009270)
0.1 0.3 GO:0000012 single strand break repair(GO:0000012)
0.1 0.4 GO:0016444 somatic cell DNA recombination(GO:0016444)
0.1 0.5 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.1 0.3 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 0.2 GO:0033120 positive regulation of RNA splicing(GO:0033120)
0.1 0.5 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.1 0.6 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 0.4 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.1 0.2 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.1 0.2 GO:0000023 maltose metabolic process(GO:0000023)
0.1 0.3 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 0.2 GO:0001894 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.1 0.2 GO:0000050 urea cycle(GO:0000050)
0.1 0.3 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 0.2 GO:1902914 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.1 0.2 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 0.2 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.0 0.3 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.2 GO:0000256 allantoin catabolic process(GO:0000256)
0.0 0.2 GO:0015669 gas transport(GO:0015669)
0.0 0.1 GO:0072388 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.0 0.3 GO:2000142 regulation of DNA-templated transcription, initiation(GO:2000142)
0.0 0.2 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.0 0.2 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.0 0.1 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.0 0.2 GO:0007019 microtubule depolymerization(GO:0007019)
0.0 0.3 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.0 0.2 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.0 0.5 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.2 GO:0046146 tetrahydrobiopterin biosynthetic process(GO:0006729) tetrahydrobiopterin metabolic process(GO:0046146)
0.0 0.2 GO:0010432 bract development(GO:0010432)
0.0 0.4 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.0 0.4 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.0 0.1 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.0 0.2 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.0 0.2 GO:0042436 tryptophan catabolic process(GO:0006569) indole-containing compound catabolic process(GO:0042436) indolalkylamine catabolic process(GO:0046218)
0.0 0.6 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.0 0.1 GO:0010061 atrichoblast differentiation(GO:0010055) trichoblast fate specification(GO:0010057) regulation of trichoblast fate specification(GO:0010061) positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) regulation of plant epidermal cell differentiation(GO:1903888) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.0 0.3 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.0 0.2 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.0 0.2 GO:1901336 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.0 0.2 GO:0051095 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0 0.2 GO:0050992 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.0 0.4 GO:0048317 seed morphogenesis(GO:0048317)
0.0 0.4 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.0 0.6 GO:0015976 carbon utilization(GO:0015976)
0.0 0.3 GO:0044211 CTP salvage(GO:0044211)
0.0 0.5 GO:0071514 regulation of gene expression by genetic imprinting(GO:0006349) genetic imprinting(GO:0071514)
0.0 0.2 GO:0046339 diacylglycerol metabolic process(GO:0046339)
0.0 0.1 GO:0097033 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.0 0.1 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.0 0.2 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.0 0.5 GO:0010161 red light signaling pathway(GO:0010161)
0.0 0.2 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.0 0.0 GO:0010254 nectary development(GO:0010254)
0.0 0.4 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.0 0.2 GO:0060919 auxin influx(GO:0060919)
0.0 0.7 GO:0006949 syncytium formation(GO:0006949)
0.0 0.1 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.0 0.2 GO:0006021 inositol biosynthetic process(GO:0006021)
0.0 0.0 GO:0055089 fatty acid homeostasis(GO:0055089)
0.0 0.1 GO:0099636 cytoplasmic streaming(GO:0099636)
0.0 0.4 GO:0045226 UDP-L-arabinose biosynthetic process(GO:0033358) extracellular polysaccharide biosynthetic process(GO:0045226) capsule polysaccharide biosynthetic process(GO:0045227) capsule organization(GO:0045230) extracellular polysaccharide metabolic process(GO:0046379)
0.0 0.1 GO:0035494 SNARE complex disassembly(GO:0035494)
0.0 0.1 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.0 0.0 GO:0032196 transposition(GO:0032196)
0.0 0.4 GO:0071333 cellular response to glucose stimulus(GO:0071333)
0.0 0.1 GO:0048654 anther morphogenesis(GO:0048654) anther wall tapetum morphogenesis(GO:0048655)
0.0 0.1 GO:0090549 response to carbon starvation(GO:0090549)
0.0 0.4 GO:0042372 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.0 0.1 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.0 0.1 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.0 0.1 GO:0019695 choline metabolic process(GO:0019695)
0.0 0.6 GO:0046463 triglyceride biosynthetic process(GO:0019432) neutral lipid biosynthetic process(GO:0046460) acylglycerol biosynthetic process(GO:0046463)
0.0 0.1 GO:0060151 peroxisome localization(GO:0060151)
0.0 0.1 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.0 0.1 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.0 0.3 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.0 0.1 GO:1901002 positive regulation of response to salt stress(GO:1901002)
0.0 0.1 GO:0007041 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.0 0.3 GO:0007143 female meiotic division(GO:0007143)
0.0 0.1 GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process(GO:1990116)
0.0 0.0 GO:0080178 5-carbamoylmethyl uridine residue modification(GO:0080178)
0.0 0.1 GO:0052746 inositol phosphorylation(GO:0052746)
0.0 0.1 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.0 0.2 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.0 0.4 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 0.3 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.0 0.1 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.0 0.4 GO:0007050 cell cycle arrest(GO:0007050)
0.0 0.3 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.2 GO:0010189 fat-soluble vitamin metabolic process(GO:0006775) vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360) fat-soluble vitamin biosynthetic process(GO:0042362)
0.0 0.2 GO:0006597 spermine biosynthetic process(GO:0006597)
0.0 0.2 GO:0015804 neutral amino acid transport(GO:0015804)
0.0 0.1 GO:0080117 secondary growth(GO:0080117)
0.0 0.1 GO:0042659 regulation of cell fate specification(GO:0042659)
0.0 0.1 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.0 0.3 GO:0052249 virus induced gene silencing(GO:0009616) modulation by symbiont of RNA levels in host(GO:0052018) modulation of RNA levels in other organism involved in symbiotic interaction(GO:0052249)
0.0 0.4 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.0 0.3 GO:0019685 photosynthesis, dark reaction(GO:0019685)
0.0 0.3 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.1 GO:0071569 protein ufmylation(GO:0071569)
0.0 0.1 GO:0010067 procambium histogenesis(GO:0010067)
0.0 0.1 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.0 0.2 GO:0016045 detection of bacterium(GO:0016045)
0.0 0.3 GO:0031048 chromatin silencing by small RNA(GO:0031048)
0.0 0.1 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.0 0.2 GO:0010262 somatic embryogenesis(GO:0010262)
0.0 0.2 GO:0016233 telomere capping(GO:0016233)
0.0 0.2 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.0 0.2 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.0 0.4 GO:0070897 DNA-templated transcriptional preinitiation complex assembly(GO:0070897)
0.0 0.1 GO:0051865 protein autoubiquitination(GO:0051865)
0.0 0.1 GO:0031057 negative regulation of histone modification(GO:0031057) negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.0 0.5 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.4 GO:0042181 ketone biosynthetic process(GO:0042181)
0.0 1.2 GO:0048544 recognition of pollen(GO:0048544)
0.0 0.2 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.1 GO:0009143 nucleoside triphosphate catabolic process(GO:0009143)
0.0 0.8 GO:0006475 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.0 0.1 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.0 0.4 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.0 0.3 GO:0001709 cell fate determination(GO:0001709)
0.0 0.0 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.0 0.2 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.0 0.1 GO:0033386 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.0 1.0 GO:0006887 exocytosis(GO:0006887)
0.0 0.0 GO:0002215 defense response to nematode(GO:0002215)
0.0 0.1 GO:0042549 photosystem II stabilization(GO:0042549)
0.0 0.1 GO:0048439 flower morphogenesis(GO:0048439)
0.0 0.1 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.0 0.5 GO:0050826 response to freezing(GO:0050826)
0.0 0.2 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.1 GO:0043407 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
0.0 0.0 GO:0006020 inositol metabolic process(GO:0006020)
0.0 0.1 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 0.5 GO:0010584 pollen exine formation(GO:0010584)
0.0 0.3 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.1 GO:0002230 positive regulation of defense response to virus by host(GO:0002230)
0.0 0.6 GO:0051225 spindle assembly(GO:0051225)
0.0 0.1 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0 0.6 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.2 GO:0019471 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.1 GO:0048577 negative regulation of short-day photoperiodism, flowering(GO:0048577)
0.0 0.1 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.0 0.1 GO:0006824 cobalt ion transport(GO:0006824)
0.0 0.4 GO:0010109 regulation of photosynthesis(GO:0010109)
0.0 0.1 GO:0070212 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.0 0.3 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.1 GO:0018107 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.0 0.1 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.0 0.1 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.0 0.1 GO:0015914 phospholipid transport(GO:0015914)
0.0 0.3 GO:0043666 regulation of phosphoprotein phosphatase activity(GO:0043666)
0.0 0.7 GO:0006338 chromatin remodeling(GO:0006338)
0.0 0.2 GO:0051262 protein tetramerization(GO:0051262)
0.0 0.1 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
0.0 0.4 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.0 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.0 0.0 GO:0007098 centrosome cycle(GO:0007098) centriole replication(GO:0007099) microtubule organizing center organization(GO:0031023) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
0.0 0.1 GO:0098876 vesicle-mediated transport to the plasma membrane(GO:0098876)
0.0 0.5 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.1 GO:0046865 isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865)
0.0 0.2 GO:0051567 histone H3-K9 methylation(GO:0051567) histone H3-K9 modification(GO:0061647)
0.0 0.0 GO:0045764 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.0 0.0 GO:1901562 response to paraquat(GO:1901562)
0.0 0.1 GO:0048564 photosystem I assembly(GO:0048564)
0.0 0.0 GO:0032012 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.0 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.0 1.7 GO:0010200 response to chitin(GO:0010200)
0.0 0.2 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.0 0.1 GO:0048209 regulation of vesicle targeting, to, from or within Golgi(GO:0048209)
0.0 0.1 GO:0015940 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.0 0.2 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 0.1 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.0 0.1 GO:0051325 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.0 0.5 GO:0009696 salicylic acid metabolic process(GO:0009696)
0.0 0.3 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.0 0.0 GO:0016120 carotene biosynthetic process(GO:0016120)
0.0 0.9 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.1 GO:0090356 negative regulation of auxin metabolic process(GO:0090356)
0.0 0.1 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.0 0.4 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.0 0.1 GO:1990414 replication-born double-strand break repair via sister chromatid exchange(GO:1990414)
0.0 0.1 GO:0036065 fucosylation(GO:0036065)
0.0 0.3 GO:0006006 glucose metabolic process(GO:0006006)
0.0 0.1 GO:0010375 stomatal complex patterning(GO:0010375)
0.0 0.1 GO:0002764 pattern recognition receptor signaling pathway(GO:0002221) immune response-activating signal transduction(GO:0002757) innate immune response-activating signal transduction(GO:0002758) immune response-regulating signaling pathway(GO:0002764)
0.0 0.2 GO:0022406 membrane docking(GO:0022406) vesicle docking(GO:0048278)
0.0 0.1 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 0.1 GO:0051014 actin filament severing(GO:0051014)
0.0 0.1 GO:0010018 far-red light signaling pathway(GO:0010018)
0.0 0.0 GO:0006898 receptor-mediated endocytosis(GO:0006898) endosome organization(GO:0007032) amyloplast organization(GO:0009660)
0.0 0.3 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 0.1 GO:0043481 pigmentation(GO:0043473) pigment accumulation(GO:0043476) pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.0 0.1 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.1 GO:0016558 protein import into peroxisome matrix(GO:0016558)
0.0 0.1 GO:1902183 regulation of shoot apical meristem development(GO:1902183)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.1 0.3 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.2 GO:0045495 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.1 0.6 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.1 0.3 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.0 0.2 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 0.3 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.0 0.2 GO:0032044 DSIF complex(GO:0032044)
0.0 0.2 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.0 0.2 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 0.1 GO:0005640 nuclear outer membrane(GO:0005640)
0.0 0.4 GO:0000243 commitment complex(GO:0000243)
0.0 0.1 GO:0033281 TAT protein transport complex(GO:0033281)
0.0 0.2 GO:0000938 GARP complex(GO:0000938)
0.0 0.3 GO:0010445 nuclear dicing body(GO:0010445)
0.0 0.8 GO:0035097 histone methyltransferase complex(GO:0035097)
0.0 0.4 GO:0031011 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.0 0.3 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.1 GO:0031932 TORC2 complex(GO:0031932)
0.0 0.2 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 0.1 GO:0000923 equatorial microtubule organizing center(GO:0000923) cell division site part(GO:0032155)
0.0 0.2 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.0 0.1 GO:1990112 RQC complex(GO:1990112)
0.0 0.3 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 0.1 GO:0032301 MutSalpha complex(GO:0032301)
0.0 0.1 GO:0034657 GID complex(GO:0034657)
0.0 0.4 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 0.3 GO:0000127 transcription factor TFIIIC complex(GO:0000127) RNA polymerase III transcription factor complex(GO:0090576)
0.0 0.2 GO:0010168 ER body(GO:0010168)
0.0 0.1 GO:0045334 clathrin-coated endocytic vesicle(GO:0045334)
0.0 0.2 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 0.3 GO:0030904 retromer complex(GO:0030904)
0.0 0.2 GO:0044450 microtubule organizing center part(GO:0044450)
0.0 0.2 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.0 0.1 GO:0000922 spindle pole(GO:0000922)
0.0 0.1 GO:0034990 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.0 0.4 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.0 0.1 GO:0030896 checkpoint clamp complex(GO:0030896)
0.0 0.2 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.0 0.4 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.0 0.8 GO:0005684 U2-type spliceosomal complex(GO:0005684)
0.0 0.1 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.0 1.9 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.2 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.0 0.1 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.2 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 1.2 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.7 GO:0016592 mediator complex(GO:0016592)
0.0 0.0 GO:0031902 late endosome membrane(GO:0031902)
0.0 0.1 GO:0033185 mannosyltransferase complex(GO:0031501) dolichol-phosphate-mannose synthase complex(GO:0033185)
0.0 0.3 GO:0005871 kinesin complex(GO:0005871)
0.0 0.0 GO:0016328 lateral plasma membrane(GO:0016328)
0.0 0.1 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.2 GO:0030427 site of polarized growth(GO:0030427)
0.0 0.7 GO:0031201 SNARE complex(GO:0031201)
0.0 0.2 GO:0009531 secondary cell wall(GO:0009531)
0.0 0.1 GO:0000445 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.0 0.1 GO:0035619 root hair tip(GO:0035619)
0.0 0.1 GO:0030141 secretory granule(GO:0030141)
0.0 0.2 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.7 GO:0009524 phragmoplast(GO:0009524)
0.0 0.4 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.0 0.4 GO:0000145 exocyst(GO:0000145)
0.0 0.2 GO:0046540 U4/U6 x U5 tri-snRNP complex(GO:0046540) spliceosomal tri-snRNP complex(GO:0097526)
0.0 0.1 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.1 GO:0071818 BAT3 complex(GO:0071818)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.2 0.6 GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.2 0.6 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.2 1.0 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.2 1.0 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.2 0.7 GO:0080002 indole-3-acetate beta-glucosyltransferase activity(GO:0047215) UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.2 0.7 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.2 1.0 GO:0047958 glycine:2-oxoglutarate aminotransferase activity(GO:0047958)
0.1 0.7 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.1 0.6 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.1 0.9 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.1 0.7 GO:0004793 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.1 1.1 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 1.1 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 0.4 GO:0008909 isochorismate synthase activity(GO:0008909)
0.1 0.4 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.1 0.5 GO:0004075 biotin carboxylase activity(GO:0004075)
0.1 0.5 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.1 0.3 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.1 0.5 GO:0008184 glycogen phosphorylase activity(GO:0008184)
0.1 0.3 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.1 0.3 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.1 0.3 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.1 0.3 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.1 0.4 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.1 0.3 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 0.4 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.1 0.3 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 0.6 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.1 0.2 GO:0010331 gibberellin binding(GO:0010331)
0.1 0.9 GO:2001070 starch binding(GO:2001070)
0.1 0.2 GO:0004645 phosphorylase activity(GO:0004645)
0.1 0.8 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 0.2 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.1 0.4 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.1 0.4 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.1 1.0 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.1 0.5 GO:0004383 guanylate cyclase activity(GO:0004383)
0.1 1.1 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 0.7 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.1 0.3 GO:0010313 phytochrome binding(GO:0010313)
0.1 0.2 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.1 0.2 GO:0070402 NADPH binding(GO:0070402)
0.1 0.5 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 0.2 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726) oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 0.3 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.1 0.2 GO:0015026 coreceptor activity(GO:0015026)
0.1 0.5 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.1 0.2 GO:0050815 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.0 0.2 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.0 0.2 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.0 0.9 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 0.3 GO:0030332 cyclin binding(GO:0030332)
0.0 0.2 GO:0015245 fatty acid transporter activity(GO:0015245)
0.0 0.5 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.0 0.3 GO:0004126 cytidine deaminase activity(GO:0004126)
0.0 0.1 GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.0 2.4 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.3 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 0.1 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.0 0.1 GO:0022858 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
0.0 0.3 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.0 0.3 GO:0004849 uridine kinase activity(GO:0004849)
0.0 0.2 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.0 0.5 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0 0.6 GO:0017025 TBP-class protein binding(GO:0017025)
0.0 0.2 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.0 1.7 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.3 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.0 0.7 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.1 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.0 0.2 GO:0070042 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.0 0.4 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.5 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.1 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.6 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.0 0.4 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.0 0.5 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.1 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.0 0.7 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.1 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.0 0.1 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.0 0.1 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.0 0.4 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.0 0.3 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.3 GO:0003747 translation release factor activity(GO:0003747) translation termination factor activity(GO:0008079)
0.0 0.1 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.1 GO:0032357 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) oxidized DNA binding(GO:0032356) oxidized purine DNA binding(GO:0032357) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.0 0.6 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.3 GO:0098847 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.0 0.2 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.5 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 0.1 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 0.2 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.1 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.0 0.2 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 0.2 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.0 0.1 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 0.1 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.0 0.1 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 0.1 GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity(GO:0003857)
0.0 0.4 GO:0015248 sterol transporter activity(GO:0015248)
0.0 0.6 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.0 0.1 GO:0043015 gamma-tubulin binding(GO:0043015)
0.0 0.3 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.2 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.3 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 1.8 GO:0051015 actin filament binding(GO:0051015)
0.0 0.1 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.0 0.5 GO:0010333 terpene synthase activity(GO:0010333)
0.0 2.4 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.1 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.0 0.1 GO:0070063 RNA polymerase binding(GO:0070063)
0.0 0.1 GO:0004766 spermidine synthase activity(GO:0004766)
0.0 0.1 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.0 0.3 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.2 GO:0019798 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0 0.1 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.1 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.0 0.1 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.0 0.1 GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen(GO:0016713)
0.0 0.7 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.3 GO:0017069 snRNA binding(GO:0017069)
0.0 0.1 GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity(GO:0004582)
0.0 0.7 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.2 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.1 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.0 0.1 GO:0004445 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.0 0.4 GO:0010427 abscisic acid binding(GO:0010427)
0.0 0.8 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.1 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.0 0.2 GO:0008252 nucleotidase activity(GO:0008252)
0.0 0.1 GO:0001727 lipid kinase activity(GO:0001727)
0.0 0.5 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.2 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.1 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.0 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.3 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 1.0 GO:0042393 histone binding(GO:0042393)
0.0 0.0 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.0 0.0 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.0 0.1 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.0 2.4 GO:0043531 ADP binding(GO:0043531)
0.0 0.1 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.7 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 1.3 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.1 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.0 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.0 0.1 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 0.1 GO:0051723 protein methylesterase activity(GO:0051723)
0.0 0.1 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.0 0.0 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.0 0.2 GO:0004575 sucrose alpha-glucosidase activity(GO:0004575)
0.0 0.0 GO:0004174 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.0 0.1 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.1 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.0 0.1 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0 0.1 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.0 0.1 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.7 GO:0004843 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network
0.1 0.3 PID BARD1 PATHWAY BARD1 signaling events
0.0 0.3 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.0 0.1 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.0 0.1 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.0 0.1 PID S1P S1P1 PATHWAY S1P1 pathway
0.0 0.1 PID ATF2 PATHWAY ATF-2 transcription factor network
0.0 0.1 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.0 0.1 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.0 0.1 PID ATR PATHWAY ATR signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 REACTOME SEMAPHORIN INTERACTIONS Genes involved in Semaphorin interactions
0.1 0.3 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.1 0.3 REACTOME PKB MEDIATED EVENTS Genes involved in PKB-mediated events
0.1 0.4 REACTOME RECYCLING OF BILE ACIDS AND SALTS Genes involved in Recycling of bile acids and salts
0.1 0.5 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
0.0 0.4 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
0.0 0.1 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.0 0.2 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.0 0.1 REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX Genes involved in Signaling by TGF-beta Receptor Complex
0.0 0.1 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.0 0.1 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism
0.0 0.1 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.0 0.1 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.0 0.1 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.0 0.1 REACTOME NUCLEAR SIGNALING BY ERBB4 Genes involved in Nuclear signaling by ERBB4
0.0 0.5 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.0 0.1 REACTOME GLUCOSE METABOLISM Genes involved in Glucose metabolism