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GSE130291:vernalization in Arabidopsis thaliana
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Results for AT3G53340
Z-value: 0.09
Transcription factors associated with AT3G53340
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
AT3G53340
|
AT3G53340 | nuclear factor Y, subunit B10 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| NF-YB10 | arTal_v1_Chr3_-_19776267_19776289 | -0.39 | 1.7e-01 | Click! |
Activity profile of AT3G53340 motif
Sorted Z-values of AT3G53340 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| arTal_v1_Chr2_-_15589369_15589369 | 0.10 |
AT2G37090.1
|
IRX9
|
Nucleotide-diphospho-sugar transferases superfamily protein |
| arTal_v1_Chr1_-_9531489_9531489 | 0.06 |
AT1G27440.1
|
GUT2
|
Exostosin family protein |
| arTal_v1_Chr2_-_12996012_12996012 | 0.05 |
AT2G30490.1
|
C4H
|
cinnamate-4-hydroxylase |
Network of associatons between targets according to the STRING database.
First level regulatory network of AT3G53340
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0010413 | glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0047517 | 1,4-beta-D-xylan synthase activity(GO:0047517) |