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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT4G23550

Z-value: 2.29

Transcription factors associated with AT4G23550

Gene Symbol Gene ID Gene Info
AT4G23550
AT4G23550 WRKY family transcription factor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
WRKY29arTal_v1_Chr4_+_12291632_122916320.752.2e-03Click!

Activity profile of AT4G23550 motif

Sorted Z-values of AT4G23550 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_-_8075037_8075037 4.55 AT1G22810.1
AT1G22810
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr4_+_6826587_6826587 4.04 AT4G11190.1
AT4G11190
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr5_-_15849108_15849141 3.80 AT5G39580.2
AT5G39580.1
AT5G39580
Peroxidase superfamily protein
arTal_v1_Chr1_-_4975705_4975705 3.40 AT1G14540.1
PER4
Peroxidase superfamily protein
arTal_v1_Chr5_-_14566439_14566439 3.34 AT5G36925.1
AT5G36925
hypothetical protein
arTal_v1_Chr3_-_17008528_17008528 3.30 AT3G46280.1
AT3G46280
kinase-like protein
arTal_v1_Chr1_+_24292372_24292490 2.96 AT1G65390.1
AT1G65390.3
AT1G65390.2
PP2-A5
phloem protein 2 A5
arTal_v1_Chr1_+_6697874_6697874 2.94 AT1G19380.1
AT1G19380
sugar, putative (DUF1195)
arTal_v1_Chr3_-_8290164_8290164 2.81 AT3G23230.1
TDR1
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr4_+_18519599_18519599 2.69 AT4G39940.1
AKN2
APS-kinase 2
arTal_v1_Chr2_+_19508929_19508929 2.65 AT2G47550.1
AT2G47550
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr5_-_19040456_19040456 2.63 AT5G46900.1
AT5G46900
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_-_19036938_19036938 2.58 AT5G46890.1
AT5G46890
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr3_-_3059148_3059244 2.58 AT3G09940.2
AT3G09940.1
MDHAR
monodehydroascorbate reductase
arTal_v1_Chr4_-_524249_524249 2.54 AT4G01250.1
WRKY22
WRKY family transcription factor
arTal_v1_Chr3_+_9480746_9480839 2.51 AT3G25900.1
AT3G25900.3
AT3G25900.2
HMT-1
Homocysteine S-methyltransferase family protein
arTal_v1_Chr5_-_18371021_18371021 2.48 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
arTal_v1_Chr1_-_2199773_2199773 2.46 AT1G07160.1
AT1G07160
Protein phosphatase 2C family protein
arTal_v1_Chr4_-_15275404_15275404 2.36 AT4G31500.1
CYP83B1
cytochrome P450, family 83, subfamily B, polypeptide 1
arTal_v1_Chr4_-_12143833_12143858 2.30 AT4G23190.1
AT4G23190.2
AT4G23190.3
CRK11
cysteine-rich RLK (RECEPTOR-like protein kinase) 11
arTal_v1_Chr1_+_20462940_20462940 2.29 AT1G54890.1
AT1G54890
Late embryogenesis abundant (LEA) protein-like protein
arTal_v1_Chr2_-_8851035_8851035 2.16 AT2G20562.1
AT2G20562
taximin
arTal_v1_Chr4_+_16598958_16598958 2.16 AT4G34810.1
AT4G34810
SAUR-like auxin-responsive protein family
arTal_v1_Chr4_+_17752079_17752079 2.15 AT4G37770.1
ACS8
1-amino-cyclopropane-1-carboxylate synthase 8
arTal_v1_Chr2_-_9564850_9564850 2.13 AT2G22500.1
UCP5
uncoupling protein 5
arTal_v1_Chr2_+_11012499_11012499 2.12 AT2G25810.1
TIP4%3B1
tonoplast intrinsic protein 4;1
arTal_v1_Chr2_-_19352088_19352088 2.11 AT2G47140.1
SDR5
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_+_24349399_24349632 2.11 AT1G65486.3
AT1G65486.4
AT1G65486.1
AT1G65486.2
AT1G65486
transmembrane protein
arTal_v1_Chr5_-_3172701_3172701 2.09 AT5G10130.1
AT5G10130
Pollen Ole e 1 allergen and extensin family protein
arTal_v1_Chr5_-_8154710_8154710 2.05 AT5G24110.1
WRKY30
WRKY DNA-binding protein 30
arTal_v1_Chr1_-_59215_59215 2.05 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
arTal_v1_Chr5_+_26266180_26266266 2.03 AT5G65690.1
AT5G65690.2
AT5G65690.3
AT5G65690.4
PCK2
phosphoenolpyruvate carboxykinase 2
arTal_v1_Chr5_+_25934568_25934568 2.02 AT5G64890.1
PROPEP2
elicitor peptide 2 precursor
arTal_v1_Chr4_-_12156881_12156881 2.01 AT4G23220.1
CRK14
cysteine-rich RECEPTOR-like kinase
arTal_v1_Chr4_+_14796695_14796764 2.00 AT4G30210.3
AT4G30210.2
AT4G30210.1
ATR2
P450 reductase 2
arTal_v1_Chr3_+_5187082_5187082 1.99 AT3G15357.1
AT3G15357
phosphopantothenoylcysteine decarboxylase subunit
arTal_v1_Chr2_-_12277417_12277417 1.98 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr1_+_5596633_5596633 1.97 AT1G16370.1
OCT6
organic cation/carnitine transporter 6
arTal_v1_Chr1_+_30383561_30383561 1.96 AT1G80840.1
WRKY40
WRKY DNA-binding protein 40
arTal_v1_Chr2_-_16497145_16497145 1.96 AT2G39518.1
AT2G39518
Uncharacterized protein family (UPF0497)
arTal_v1_Chr2_-_16359943_16359943 1.95 AT2G39200.1
MLO12
Seven transmembrane MLO family protein
arTal_v1_Chr2_-_7707954_7707954 1.95 AT2G17740.1
AT2G17740
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr4_+_6869863_6869863 1.93 AT4G11290.1
AT4G11290
Peroxidase superfamily protein
arTal_v1_Chr3_-_10590685_10590685 1.91 AT3G28340.1
GATL10
galacturonosyltransferase-like 10
arTal_v1_Chr2_-_16499524_16499524 1.90 AT2G39530.1
AT2G39530
Uncharacterized protein family (UPF0497)
arTal_v1_Chr2_-_17002528_17002528 1.89 AT2G40750.1
WRKY54
WRKY DNA-binding protein 54
arTal_v1_Chr5_+_4335595_4335595 1.89 AT5G13490.2
AAC2
ADP/ATP carrier 2
arTal_v1_Chr4_-_8273903_8273903 1.89 AT4G14365.1
XBAT34
hypothetical protein
arTal_v1_Chr2_-_9741463_9741463 1.89 AT2G22880.1
AT2G22880
VQ motif-containing protein
arTal_v1_Chr2_-_12277245_12277245 1.88 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr4_-_12143476_12143476 1.87 AT4G23190.4
CRK11
cysteine-rich RLK (RECEPTOR-like protein kinase) 11
arTal_v1_Chr5_+_26894778_26894778 1.86 AT5G67400.1
RHS19
root hair specific 19
arTal_v1_Chr5_+_6833564_6833659 1.85 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
DIN10
Raffinose synthase family protein
arTal_v1_Chr1_+_12188678_12188678 1.85 AT1G33610.1
AT1G33610
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_+_6389399_6389399 1.84 AT1G18570.1
MYB51
myb domain protein 51
arTal_v1_Chr5_+_17734706_17734708 1.83 AT5G44070.1
AT5G44070.2
CAD1
phytochelatin synthase 1 (PCS1)
arTal_v1_Chr5_+_4335272_4335272 1.82 AT5G13490.1
AAC2
ADP/ATP carrier 2
arTal_v1_Chr1_-_23460884_23460884 1.82 AT1G63245.1
CLE14
CLAVATA3/ESR-RELATED 14
arTal_v1_Chr3_-_3731251_3731251 1.82 AT3G11820.1
AT3G11820.2
SYP121
syntaxin of plants 121
arTal_v1_Chr4_+_6985517_6985517 1.81 AT4G11521.1
AT4G11521
Receptor-like protein kinase-related family protein
arTal_v1_Chr5_-_22358381_22358413 1.81 AT5G55090.1
AT5G55090.2
MAPKKK15
mitogen-activated protein kinase kinase kinase 15
arTal_v1_Chr1_+_24357749_24357749 1.80 AT1G65500.1
AT1G65500
transmembrane protein
arTal_v1_Chr3_+_5249112_5249112 1.80 AT3G15518.1
AT3G15518
hypothetical protein
arTal_v1_Chr2_-_8088302_8088302 1.79 AT2G18650.1
MEE16
RING/U-box superfamily protein
arTal_v1_Chr1_-_25065446_25065446 1.77 AT1G67110.1
AT1G67110.2
CYP735A2
cytochrome P450, family 735, subfamily A, polypeptide 2
arTal_v1_Chr3_+_7770899_7770899 1.74 AT3G22060.1
AT3G22060
Receptor-like protein kinase-related family protein
arTal_v1_Chr4_+_160643_160643 1.74 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
arTal_v1_Chr3_-_20418910_20418910 1.73 AT3G55090.1
ABCG16
ABC-2 type transporter family protein
arTal_v1_Chr1_-_20015038_20015038 1.71 AT1G53625.1
AT1G53625
hypothetical protein
arTal_v1_Chr5_+_25064793_25064793 1.70 AT5G62420.1
AT5G62420
NAD(P)-linked oxidoreductase superfamily protein
arTal_v1_Chr3_-_20442650_20442650 1.70 AT3G55150.1
EXO70H1
exocyst subunit exo70 family protein H1
arTal_v1_Chr4_-_16740601_16740601 1.69 AT4G35180.2
AT4G35180.1
LHT7
LYS/HIS transporter 7
arTal_v1_Chr4_+_18185437_18185437 1.68 AT4G39030.1
EDS5
MATE efflux family protein
arTal_v1_Chr2_+_15706285_15706285 1.68 AT2G37430.1
ZAT11
C2H2 and C2HC zinc fingers superfamily protein
arTal_v1_Chr5_+_4904290_4904290 1.67 AT5G15130.1
WRKY72
WRKY DNA-binding protein 72
arTal_v1_Chr1_-_20707071_20707071 1.67 AT1G55450.1
AT1G55450
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr3_-_2130451_2130451 1.67 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr3_+_11005638_11005638 1.67 AT3G29000.1
AT3G29000
Calcium-binding EF-hand family protein
arTal_v1_Chr5_-_19629167_19629167 1.67 AT5G48430.1
AT5G48430
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_-_4664681_4664681 1.66 AT5G14470.1
AT5G14470
GHMP kinase family protein
arTal_v1_Chr1_-_473160_473336 1.66 AT1G02360.1
AT1G02360.2
AT1G02360.3
AT1G02360
Chitinase family protein
arTal_v1_Chr3_-_17910736_17910738 1.65 AT3G48360.3
AT3G48360.1
AT3G48360.2
BT2
BTB and TAZ domain protein 2
arTal_v1_Chr1_-_20706893_20706893 1.64 AT1G55450.2
AT1G55450
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr5_+_4904873_4904873 1.64 AT5G15130.2
WRKY72
WRKY DNA-binding protein 72
arTal_v1_Chr5_-_3993610_3993610 1.63 AT5G12340.1
AT5G12340
DUF4228 domain protein
arTal_v1_Chr5_+_17451488_17451488 1.62 AT5G43420.1
AT5G43420
RING/U-box superfamily protein
arTal_v1_Chr1_+_10375599_10375599 1.62 AT1G29670.2
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr5_-_3993767_3993767 1.62 AT5G12340.2
AT5G12340
DUF4228 domain protein
arTal_v1_Chr4_-_2413447_2413447 1.61 AT4G04745.1
AT4G04745
hypothetical protein
arTal_v1_Chr3_+_3556554_3556554 1.61 AT3G11340.1
UGT76B1
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr3_-_3357754_3357754 1.61 AT3G10720.2
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr1_-_21063047_21063047 1.60 AT1G56250.1
PP2-B14
phloem protein 2-B14
arTal_v1_Chr3_+_18733021_18733042 1.60 AT3G50480.2
AT3G50480.1
HR4
homolog of RPW8 4
arTal_v1_Chr4_-_13460105_13460105 1.60 AT4G26690.1
SHV3
PLC-like phosphodiesterase family protein
arTal_v1_Chr4_-_8753157_8753297 1.59 AT4G15330.2
AT4G15330.1
CYP705A1
cytochrome P450, family 705, subfamily A, polypeptide 1
arTal_v1_Chr1_+_27308513_27308513 1.59 AT1G72520.1
LOX4
PLAT/LH2 domain-containing lipoxygenase family protein
arTal_v1_Chr4_-_1046993_1047105 1.58 AT4G02380.2
AT4G02380.1
AT4G02380.3
SAG21
senescence-associated gene 21
arTal_v1_Chr5_-_23992908_23992908 1.58 AT5G59520.1
ZIP2
ZRT/IRT-like protein 2
arTal_v1_Chr1_-_20019835_20019835 1.57 AT1G53635.1
AT1G53635
hypothetical protein
arTal_v1_Chr4_+_12137995_12138137 1.54 AT4G23180.1
AT4G23180.3
AT4G23180.2
CRK10
cysteine-rich RLK (RECEPTOR-like protein kinase) 10
arTal_v1_Chr3_+_7518784_7518784 1.54 AT3G21351.1
AT3G21351
transmembrane protein
arTal_v1_Chr5_+_18345534_18345595 1.54 AT5G45280.2
AT5G45280.1
AT5G45280
Pectinacetylesterase family protein
arTal_v1_Chr3_-_16487349_16487484 1.54 AT3G45070.1
AT3G45070.3
AT3G45070.2
AT3G45070
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr5_+_463073_463073 1.54 AT5G02260.1
EXPA9
expansin A9
arTal_v1_Chr1_+_19214072_19214072 1.52 AT1G51800.1
IOS1
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr2_+_10838294_10838420 1.52 AT2G25470.2
AT2G25470.3
AT2G25470.1
RLP21
receptor like protein 21
arTal_v1_Chr5_-_8856758_8856809 1.51 AT5G25440.1
AT5G25440.2
AT5G25440
Protein kinase superfamily protein
arTal_v1_Chr5_-_19669920_19669920 1.51 AT5G48540.1
AT5G48540
receptor-like protein kinase-related family protein
arTal_v1_Chr1_+_10375754_10375754 1.50 AT1G29670.1
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr5_-_22230500_22230500 1.49 AT5G54710.1
AT5G54710
Ankyrin repeat family protein
arTal_v1_Chr5_-_22230663_22230663 1.49 AT5G54710.2
AT5G54710
Ankyrin repeat family protein
arTal_v1_Chr1_+_18209194_18209194 1.48 AT1G49230.1
AT1G49230
RING/U-box superfamily protein
arTal_v1_Chr4_+_12291632_12291632 1.46 AT4G23550.1
WRKY29
WRKY family transcription factor
arTal_v1_Chr4_+_9816278_9816680 1.46 AT4G17615.1
AT4G17615.3
AT4G17615.4
AT4G17615.2
AT4G17615.5
CBL1
calcineurin B-like protein 1
arTal_v1_Chr2_-_17441416_17441416 1.45 AT2G41810.1
AT2G41810
imidazolonepropionase (Protein of unknown function, DUF642)
arTal_v1_Chr2_+_15379660_15379660 1.45 AT2G36690.1
AT2G36690
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr2_+_15847450_15847450 1.45 AT2G37820.1
AT2G37820
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr4_+_6967709_6967729 1.44 AT4G11470.2
AT4G11470.1
CRK31
cysteine-rich RLK (RECEPTOR-like protein kinase) 31
arTal_v1_Chr5_+_18137349_18137349 1.44 AT5G44910.1
AT5G44910
Toll-Interleukin-Resistance (TIR) domain family protein
arTal_v1_Chr2_-_10439469_10439469 1.44 AT2G24570.1
WRKY17
WRKY DNA-binding protein 17
arTal_v1_Chr1_-_9676157_9676307 1.43 AT1G27770.2
AT1G27770.3
AT1G27770.1
AT1G27770.4
ACA1
autoinhibited Ca2+-ATPase 1
arTal_v1_Chr5_+_9683988_9683988 1.42 AT5G27420.1
CNI1
carbon/nitrogen insensitive 1
arTal_v1_Chr2_-_16368570_16368570 1.41 AT2G39210.1
AT2G39210
Major facilitator superfamily protein
arTal_v1_Chr3_-_3356811_3356811 1.41 AT3G10720.1
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr1_+_26814260_26814260 1.40 AT1G71100.1
RSW10
Ribose 5-phosphate isomerase, type A protein
arTal_v1_Chr2_+_15379846_15379846 1.40 AT2G36690.2
AT2G36690
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr2_-_15186852_15186852 1.39 AT2G36210.1
AT2G36210
SAUR-like auxin-responsive protein family
arTal_v1_Chr2_-_10122479_10122479 1.39 AT2G23770.1
LYK4
protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
arTal_v1_Chr4_+_16354857_16354857 1.38 AT4G34150.1
AT4G34150
Calcium-dependent lipid-binding (CaLB domain) family protein
arTal_v1_Chr3_+_18728935_18728935 1.37 AT3G50470.1
HR3
homolog of RPW8 3
arTal_v1_Chr1_+_10748261_10748261 1.37 AT1G30420.1
AT1G30420.2
ABCC11
multidrug resistance-associated protein 12
arTal_v1_Chr5_+_6467527_6467527 1.36 AT5G19230.1
AT5G19230
Glycoprotein membrane precursor GPI-anchored
arTal_v1_Chr5_+_6467193_6467193 1.36 AT5G19230.2
AT5G19230
Glycoprotein membrane precursor GPI-anchored
arTal_v1_Chr5_+_15616770_15616770 1.36 AT5G39020.1
AT5G39020
Malectin/receptor-like protein kinase family protein
arTal_v1_Chr1_-_8559066_8559066 1.35 AT1G24170.1
LGT9
Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr5_-_1931782_1931782 1.35 AT5G06320.1
NHL3
NDR1/HIN1-like 3
arTal_v1_Chr4_-_1539987_1539987 1.34 AT4G03460.2
AT4G03460
Ankyrin repeat family protein
arTal_v1_Chr4_+_756348_756348 1.34 AT4G01750.1
RGXT2
rhamnogalacturonan xylosyltransferase 2
arTal_v1_Chr3_-_9710100_9710100 1.34 AT3G26500.1
PIRL2
plant intracellular ras group-related LRR 2
arTal_v1_Chr5_+_7927122_7927128 1.33 AT5G23510.3
AT5G23510.1
AT5G23510
hypothetical protein
arTal_v1_Chr4_+_12249033_12249071 1.33 AT4G23470.2
AT4G23470.3
AT4G23470.4
AT4G23470
PLAC8 family protein
arTal_v1_Chr5_-_20468128_20468217 1.33 AT5G50300.1
AT5G50300.2
AZG2
Xanthine/uracil permease family protein
arTal_v1_Chr3_+_21059785_21059785 1.33 AT3G56880.1
AT3G56880
VQ motif-containing protein
arTal_v1_Chr2_-_18463533_18463533 1.32 AT2G44790.1
UCC2
uclacyanin 2
arTal_v1_Chr2_-_16237280_16237280 1.30 AT2G38870.1
AT2G38870
Serine protease inhibitor, potato inhibitor I-type family protein
arTal_v1_Chr5_-_3018342_3018342 1.30 AT5G09730.1
BXL3
beta-xylosidase 3
arTal_v1_Chr1_+_28746833_28746833 1.27 AT1G76600.1
AT1G76600
poly polymerase
arTal_v1_Chr3_+_21193680_21193680 1.27 AT3G57280.1
AT3G57280
Transmembrane proteins 14C
arTal_v1_Chr3_-_6491429_6491429 1.27 AT3G18830.1
PMT5
polyol/monosaccharide transporter 5
arTal_v1_Chr1_-_19366924_19366925 1.27 AT1G52070.2
AT1G52070.1
AT1G52070
Mannose-binding lectin superfamily protein
arTal_v1_Chr1_-_22641999_22641999 1.26 AT1G61360.4
AT1G61360.3
AT1G61360
S-locus lectin protein kinase family protein
arTal_v1_Chr1_-_19256783_19256927 1.25 AT1G51850.1
AT1G51850.2
AT1G51850
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr1_-_9128568_9128568 1.25 AT1G26380.1
AT1G26380
FAD-binding Berberine family protein
arTal_v1_Chr2_-_14592140_14592140 1.25 AT2G34650.1
PID
Protein kinase superfamily protein
arTal_v1_Chr1_-_9649323_9649323 1.24 AT1G27730.1
STZ
salt tolerance zinc finger
arTal_v1_Chr3_+_10911132_10911157 1.24 AT3G28910.1
AT3G28910.2
MYB30
myb domain protein 30
arTal_v1_Chr1_+_6622055_6622114 1.24 AT1G19180.3
AT1G19180.2
JAZ1
jasmonate-zim-domain protein 1
arTal_v1_Chr5_+_14912659_14912659 1.24 AT5G37540.1
AT5G37540
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_+_25891449_25891449 1.24 AT5G64750.1
ABR1
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_+_19935163_19935163 1.24 AT1G53430.2
AT1G53430
Leucine-rich repeat transmembrane protein kinase
arTal_v1_Chr4_-_9883432_9883432 1.22 AT4G17785.1
AT4G17785.2
MYB39
myb domain protein 39
arTal_v1_Chr1_+_19934987_19934987 1.22 AT1G53430.1
AT1G53430
Leucine-rich repeat transmembrane protein kinase
arTal_v1_Chr1_-_16767685_16767685 1.21 AT1G44100.1
AAP5
amino acid permease 5
arTal_v1_Chr1_+_11931149_11931149 1.20 AT1G32928.1
AT1G32928
Avr9/Cf-9 rapidly elicited protein
arTal_v1_Chr1_+_22034423_22034423 1.20 AT1G59870.1
PEN3
ABC-2 and Plant PDR ABC-type transporter family protein
arTal_v1_Chr4_+_12248842_12248842 1.19 AT4G23470.1
AT4G23470
PLAC8 family protein
arTal_v1_Chr5_+_834859_834859 1.19 AT5G03390.1
AT5G03390
hypothetical protein (DUF295)
arTal_v1_Chr1_+_19140130_19140130 1.19 AT1G51620.2
AT1G51620.1
AT1G51620
Protein kinase superfamily protein
arTal_v1_Chr2_-_11800928_11800928 1.19 AT2G27660.1
AT2G27660
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr1_+_6621777_6621777 1.18 AT1G19180.1
JAZ1
jasmonate-zim-domain protein 1
arTal_v1_Chr1_-_8940613_8940613 1.18 AT1G25450.1
KCS5
3-ketoacyl-CoA synthase 5
arTal_v1_Chr3_+_3442237_3442237 1.18 AT3G10985.1
SAG20
senescence associated gene 20
arTal_v1_Chr4_-_1540713_1540713 1.17 AT4G03460.1
AT4G03460
Ankyrin repeat family protein
arTal_v1_Chr5_-_4620551_4620551 1.17 AT5G14330.1
AT5G14330
transmembrane protein
arTal_v1_Chr5_+_7926945_7926945 1.17 AT5G23510.2
AT5G23510
hypothetical protein
arTal_v1_Chr4_-_11185844_11185844 1.17 AT4G20900.2
AT4G20900.1
MS5
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_-_22641111_22641111 1.16 AT1G61360.1
AT1G61360
S-locus lectin protein kinase family protein
arTal_v1_Chr5_-_18780205_18780205 1.16 AT5G46295.1
AT5G46295
transmembrane protein
arTal_v1_Chr3_+_16931991_16932066 1.16 AT3G46110.3
AT3G46110.2
AT3G46110.1
AT3G46110
UPSTREAM OF FLC-like protein (DUF966)
arTal_v1_Chr5_+_17984527_17984527 1.15 AT5G44585.1
AT5G44585
hypothetical protein
arTal_v1_Chr5_-_3480621_3480621 1.15 AT5G11000.1
AT5G11000
hypothetical protein (DUF868)
arTal_v1_Chr2_-_16235234_16235367 1.15 AT2G38860.3
AT2G38860.1
AT2G38860.2
YLS5
Class I glutamine amidotransferase-like superfamily protein
arTal_v1_Chr1_-_16838562_16838562 1.15 AT1G44350.1
ILL6
IAA-amino acid hydrolase ILR1-like 6
arTal_v1_Chr2_+_18314188_18314188 1.14 AT2G44340.1
AT2G44340
VQ motif-containing protein
arTal_v1_Chr5_-_2362228_2362228 1.14 AT5G07460.1
PMSR2
peptidemethionine sulfoxide reductase 2
arTal_v1_Chr1_+_10892445_10892445 1.14 AT1G30700.1
AT1G30700
FAD-binding Berberine family protein
arTal_v1_Chr2_+_18842516_18842516 1.13 AT2G45750.1
AT2G45750
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_+_5525293_5525293 1.13 AT1G16130.1
WAKL2
wall associated kinase-like 2
arTal_v1_Chr2_+_13554870_13554870 1.13 AT2G31880.1
SOBIR1
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr3_-_19060036_19060087 1.13 AT3G51340.1
AT3G51340.3
AT3G51340.4
AT3G51340.2
AT3G51340
Eukaryotic aspartyl protease family protein
arTal_v1_Chr5_+_26369045_26369045 1.12 AT5G65925.1
AT5G65925
hypothetical protein
arTal_v1_Chr4_+_10838310_10838310 1.12 AT4G20000.1
AT4G20000
VQ motif-containing protein
arTal_v1_Chr4_+_14566183_14566265 1.12 AT4G29740.3
AT4G29740.2
AT4G29740.1
CKX4
cytokinin oxidase 4
arTal_v1_Chr5_-_25460436_25460436 1.11 AT5G63595.1
FLS4
flavonol synthase 4
arTal_v1_Chr1_+_3273753_3273753 1.11 AT1G10030.1
ERG28
ergosterol biosynthesis protein
arTal_v1_Chr5_+_21399331_21399331 1.11 AT5G52810.1
AT5G52810
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr4_-_15291539_15291567 1.11 AT4G31550.1
AT4G31550.3
WRKY11
WRKY DNA-binding protein 11
arTal_v1_Chr3_+_8309209_8309210 1.10 AT3G23250.1
AT3G23250.2
MYB15
myb domain protein 15
arTal_v1_Chr1_-_22641825_22641825 1.10 AT1G61360.2
AT1G61360
S-locus lectin protein kinase family protein
arTal_v1_Chr1_-_27214688_27214688 1.09 AT1G72280.1
ERO1
endoplasmic reticulum oxidoreductins 1

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G23550

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.5 GO:0010045 response to nickel cation(GO:0010045)
0.8 2.5 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.7 3.0 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.7 2.2 GO:0015802 basic amino acid transport(GO:0015802)
0.7 2.8 GO:0019427 acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.7 2.1 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.6 1.9 GO:0010446 response to alkaline pH(GO:0010446)
0.6 3.9 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.6 1.7 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.5 1.5 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.5 2.5 GO:0071323 cellular response to chitin(GO:0071323)
0.5 1.8 GO:0010185 regulation of cellular defense response(GO:0010185)
0.4 2.5 GO:0043290 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.4 1.8 GO:0046938 phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849)
0.3 5.1 GO:0015865 purine nucleotide transport(GO:0015865)
0.3 1.3 GO:0060862 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.3 1.0 GO:2000693 hypotonic response(GO:0006971) positive regulation of seed maturation(GO:2000693)
0.3 0.9 GO:0055089 fatty acid homeostasis(GO:0055089)
0.3 1.2 GO:0035264 multicellular organism growth(GO:0035264)
0.3 0.9 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.3 2.7 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.3 1.2 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.3 2.2 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.3 0.8 GO:0046102 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.3 1.0 GO:0050992 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.3 1.5 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.3 1.0 GO:0006741 NADP biosynthetic process(GO:0006741)
0.2 0.7 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.2 1.3 GO:0043090 amino acid import(GO:0043090)
0.2 0.8 GO:0006024 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.2 0.6 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.2 0.6 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.2 1.0 GO:0015824 proline transport(GO:0015824)
0.2 2.0 GO:0050691 regulation of defense response to virus by host(GO:0050691)
0.2 1.3 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.2 1.1 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.2 1.4 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.2 0.8 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.2 1.6 GO:0009610 response to symbiotic fungus(GO:0009610)
0.2 1.3 GO:0006524 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.2 3.2 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.2 0.5 GO:0045905 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.1 1.8 GO:0080086 stamen filament development(GO:0080086)
0.1 1.0 GO:0032890 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) amino acid export(GO:0032973) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.1 0.4 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.1 1.0 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.1 0.6 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.1 2.0 GO:0030497 fatty acid elongation(GO:0030497)
0.1 1.4 GO:1902025 nitrate import(GO:1902025)
0.1 1.8 GO:1900457 regulation of brassinosteroid mediated signaling pathway(GO:1900457)
0.1 17.4 GO:0010200 response to chitin(GO:0010200)
0.1 4.4 GO:0042631 cellular response to water deprivation(GO:0042631)
0.1 0.9 GO:0006000 fructose metabolic process(GO:0006000)
0.1 0.5 GO:0071480 cellular response to gamma radiation(GO:0071480)
0.1 0.4 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.1 6.4 GO:0002239 response to oomycetes(GO:0002239)
0.1 1.9 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.1 1.7 GO:0052541 plant-type cell wall cellulose metabolic process(GO:0052541)
0.1 2.1 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.1 0.7 GO:0005513 detection of calcium ion(GO:0005513)
0.1 0.2 GO:0002215 defense response to nematode(GO:0002215)
0.1 0.4 GO:0010447 response to acidic pH(GO:0010447)
0.1 0.3 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.1 0.5 GO:0010272 response to silver ion(GO:0010272)
0.1 1.1 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.7 GO:0060866 leaf abscission(GO:0060866)
0.1 1.7 GO:0006538 glutamate catabolic process(GO:0006538)
0.1 0.6 GO:2000068 regulation of defense response to insect(GO:2000068)
0.1 0.5 GO:0060631 regulation of meiosis I(GO:0060631)
0.1 1.6 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.1 2.6 GO:0010193 response to ozone(GO:0010193)
0.1 1.5 GO:0048766 root hair initiation(GO:0048766)
0.1 1.5 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 0.5 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.1 3.6 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 0.8 GO:0072659 protein localization to plasma membrane(GO:0072659)
0.1 0.5 GO:0071493 cellular response to UV-B(GO:0071493)
0.1 2.5 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.1 0.4 GO:0006517 protein deglycosylation(GO:0006517)
0.1 1.2 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.1 0.7 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.3 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.1 0.4 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.1 3.6 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.1 6.9 GO:0045490 pectin catabolic process(GO:0045490)
0.1 0.2 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 1.2 GO:0000038 very long-chain fatty acid metabolic process(GO:0000038)
0.1 0.2 GO:0032196 transposition(GO:0032196)
0.1 1.2 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.1 0.2 GO:0051703 pollen tube reception(GO:0010483) intraspecies interaction between organisms(GO:0051703)
0.1 0.7 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 0.7 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.1 0.8 GO:0015706 nitrate transport(GO:0015706)
0.1 1.7 GO:0006094 gluconeogenesis(GO:0006094)
0.1 3.3 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.1 13.8 GO:0071456 cellular response to hypoxia(GO:0071456)
0.1 0.8 GO:0009554 megasporogenesis(GO:0009554)
0.1 0.5 GO:0090057 root radial pattern formation(GO:0090057)
0.1 0.5 GO:0006597 spermine biosynthetic process(GO:0006597)
0.1 1.0 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.1 1.3 GO:0006730 one-carbon metabolic process(GO:0006730)
0.1 1.0 GO:0032409 regulation of transporter activity(GO:0032409)
0.1 0.2 GO:1904580 regulation of vacuolar transport(GO:1903335) regulation of intracellular mRNA localization(GO:1904580)
0.1 0.3 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.1 0.6 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 4.1 GO:0048544 recognition of pollen(GO:0048544)
0.1 0.8 GO:0005987 sucrose catabolic process(GO:0005987)
0.1 0.6 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348) positive regulation of cell wall organization or biogenesis(GO:1903340)
0.1 0.2 GO:0035964 COPI-coated vesicle budding(GO:0035964) Golgi vesicle budding(GO:0048194) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.1 0.8 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.1 0.2 GO:0090603 sieve element differentiation(GO:0090603)
0.1 0.4 GO:0080117 secondary growth(GO:0080117)
0.1 0.2 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.1 0.6 GO:0080144 amino acid homeostasis(GO:0080144)
0.1 2.5 GO:0030041 actin filament polymerization(GO:0030041)
0.1 0.6 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.1 1.4 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.1 0.2 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.0 1.0 GO:0000165 MAPK cascade(GO:0000165)
0.0 0.9 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.2 GO:1902751 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.0 0.7 GO:0009556 microsporogenesis(GO:0009556)
0.0 2.4 GO:0030198 extracellular matrix organization(GO:0030198) extracellular structure organization(GO:0043062)
0.0 2.1 GO:0009851 auxin biosynthetic process(GO:0009851)
0.0 1.1 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.6 GO:0018126 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.3 GO:0070301 cellular response to hydrogen peroxide(GO:0070301)
0.0 0.8 GO:0019374 galactolipid metabolic process(GO:0019374)
0.0 0.4 GO:0010098 suspensor development(GO:0010098)
0.0 0.6 GO:0000105 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.7 GO:0046855 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.0 1.3 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.8 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.6 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.9 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.3 GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process(GO:0006207)
0.0 0.2 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.0 2.9 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 1.5 GO:0009814 defense response, incompatible interaction(GO:0009814)
0.0 0.6 GO:0015743 malate transport(GO:0015743)
0.0 0.3 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.0 0.3 GO:0007021 tubulin complex assembly(GO:0007021)
0.0 3.6 GO:0080167 response to karrikin(GO:0080167)
0.0 0.7 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.5 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.0 0.8 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.0 0.6 GO:0006814 sodium ion transport(GO:0006814)
0.0 2.4 GO:0072522 purine-containing compound biosynthetic process(GO:0072522)
0.0 0.5 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.2 GO:0031507 heterochromatin assembly(GO:0031507)
0.0 1.3 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.3 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.0 0.2 GO:0052542 defense response by callose deposition(GO:0052542)
0.0 3.1 GO:0010054 trichoblast differentiation(GO:0010054)
0.0 0.3 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 1.1 GO:0007031 peroxisome organization(GO:0007031)
0.0 0.2 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.0 0.6 GO:0009825 multidimensional cell growth(GO:0009825)
0.0 0.4 GO:0000266 mitochondrial fission(GO:0000266)
0.0 1.2 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 1.1 GO:0006865 amino acid transport(GO:0006865)
0.0 2.0 GO:0019932 second-messenger-mediated signaling(GO:0019932)
0.0 4.3 GO:0050832 defense response to fungus(GO:0050832)
0.0 1.0 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 1.6 GO:0009620 response to fungus(GO:0009620)
0.0 2.1 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 0.7 GO:0031145 anaphase-promoting complex-dependent catabolic process(GO:0031145)
0.0 0.2 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.0 0.3 GO:0010052 guard cell differentiation(GO:0010052)
0.0 0.3 GO:0010076 maintenance of floral meristem identity(GO:0010076)
0.0 1.7 GO:0006631 fatty acid metabolic process(GO:0006631)
0.0 0.2 GO:0006102 isocitrate metabolic process(GO:0006102)
0.0 0.6 GO:0051607 defense response to virus(GO:0051607)
0.0 0.2 GO:0046688 response to copper ion(GO:0046688)
0.0 0.5 GO:0050826 response to freezing(GO:0050826)
0.0 0.4 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.3 GO:0031647 regulation of protein stability(GO:0031647)
0.0 0.6 GO:0009664 plant-type cell wall organization(GO:0009664)
0.0 0.8 GO:0010087 phloem or xylem histogenesis(GO:0010087)
0.0 0.2 GO:0009641 shade avoidance(GO:0009641)
0.0 0.4 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.0 0.3 GO:0047484 regulation of response to osmotic stress(GO:0047484)
0.0 0.7 GO:0030422 production of siRNA involved in RNA interference(GO:0030422)
0.0 0.8 GO:0009808 lignin metabolic process(GO:0009808)
0.0 0.2 GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.0 0.2 GO:0010274 hydrotropism(GO:0010274)
0.0 0.2 GO:0070417 cellular response to cold(GO:0070417)
0.0 0.0 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
0.0 0.5 GO:0009698 phenylpropanoid metabolic process(GO:0009698)
0.0 0.1 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.0 0.6 GO:0010017 red or far-red light signaling pathway(GO:0010017)
0.0 0.3 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.4 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.1 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.0 0.3 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.3 GO:0009986 cell surface(GO:0009986)
0.1 1.3 GO:0044426 cell wall part(GO:0044426) external encapsulating structure part(GO:0044462)
0.1 2.1 GO:0031012 extracellular matrix(GO:0031012)
0.1 0.7 GO:0070390 transcription export complex 2(GO:0070390)
0.1 0.3 GO:0009346 citrate lyase complex(GO:0009346)
0.1 11.5 GO:0009505 plant-type cell wall(GO:0009505)
0.1 9.6 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 3.7 GO:0090406 pollen tube(GO:0090406)
0.1 2.2 GO:0000145 exocyst(GO:0000145)
0.1 0.2 GO:0030093 chloroplast photosystem I(GO:0030093)
0.0 0.4 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 1.5 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.2 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.0 3.9 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 1.4 GO:0005811 lipid particle(GO:0005811)
0.0 0.2 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 1.3 GO:0009504 cell plate(GO:0009504)
0.0 0.1 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.0 0.2 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.0 3.1 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 0.4 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.6 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.3 GO:0005844 polysome(GO:0005844)
0.0 0.1 GO:0005787 signal peptidase complex(GO:0005787)
0.0 52.2 GO:0005576 extracellular region(GO:0005576)
0.0 0.3 GO:0016324 apical plasma membrane(GO:0016324)
0.0 1.0 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.0 0.2 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.0 2.0 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.5 GO:0015934 large ribosomal subunit(GO:0015934)
0.0 0.8 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.8 GO:0000139 Golgi membrane(GO:0000139)
0.0 2.8 GO:0005740 mitochondrial envelope(GO:0005740)
0.0 0.3 GO:0030134 ER to Golgi transport vesicle(GO:0030134)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.5 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.7 2.1 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.6 2.4 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.6 2.8 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.5 1.6 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.5 2.5 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.5 0.9 GO:0008865 fructokinase activity(GO:0008865)
0.4 1.3 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
0.4 2.0 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.4 3.7 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.4 1.8 GO:0008490 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225) cadmium ion binding(GO:0046870)
0.4 3.2 GO:0009922 fatty acid elongase activity(GO:0009922)
0.4 1.4 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.3 1.0 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.3 2.2 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.3 2.7 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.3 2.0 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.3 0.9 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.3 1.5 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.2 1.7 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.2 1.0 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.2 1.1 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.2 3.9 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.2 0.8 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.2 1.9 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.2 1.0 GO:0016675 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.2 1.8 GO:0043495 protein anchor(GO:0043495)
0.2 0.6 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.2 2.6 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.2 0.8 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.2 1.0 GO:0000048 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.2 1.0 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.2 1.3 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.2 2.1 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.2 1.7 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.2 0.5 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.2 0.5 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.2 2.0 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.2 0.8 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.2 2.6 GO:0004568 chitinase activity(GO:0004568)
0.2 2.1 GO:0008061 chitin binding(GO:0008061)
0.2 1.1 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.2 1.1 GO:0045431 flavonol synthase activity(GO:0045431)
0.2 0.9 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 1.7 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.1 3.8 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.9 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.9 GO:0043015 gamma-tubulin binding(GO:0043015)
0.1 0.7 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.1 0.7 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 2.2 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.9 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 3.3 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.1 6.8 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 0.9 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 0.5 GO:0016768 spermine synthase activity(GO:0016768)
0.1 0.4 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.1 1.4 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.1 0.3 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.1 2.2 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.1 0.5 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.1 0.8 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.1 1.1 GO:0030674 protein binding, bridging(GO:0030674)
0.1 0.4 GO:0004441 inositol-1,4-bisphosphate 1-phosphatase activity(GO:0004441)
0.1 0.6 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.1 1.2 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.1 8.1 GO:0004601 peroxidase activity(GO:0004601)
0.1 2.5 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.1 16.5 GO:0005516 calmodulin binding(GO:0005516)
0.1 0.4 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 0.9 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 3.8 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.1 0.3 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.1 0.4 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.1 0.8 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.1 0.3 GO:0052659 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.1 1.4 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 0.8 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.1 3.7 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.1 1.0 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.1 0.8 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 0.5 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.1 0.3 GO:0043916 DNA-7-methylguanine glycosylase activity(GO:0043916)
0.1 0.5 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.8 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 0.8 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.1 0.7 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.1 0.4 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 0.5 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 1.3 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 2.0 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.1 0.7 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 1.2 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 0.4 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.0 0.2 GO:0004594 pantothenate kinase activity(GO:0004594)
0.0 0.9 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.0 0.2 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.0 2.7 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.9 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.4 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 0.8 GO:0031418 L-ascorbic acid binding(GO:0031418)
0.0 0.2 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.0 1.4 GO:0005179 hormone activity(GO:0005179)
0.0 0.4 GO:0008083 growth factor activity(GO:0008083)
0.0 0.2 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.0 1.8 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.2 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.3 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.5 GO:0097599 endo-1,4-beta-xylanase activity(GO:0031176) xylanase activity(GO:0097599)
0.0 0.9 GO:0016846 carbon-sulfur lyase activity(GO:0016846)
0.0 0.3 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.0 0.6 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.5 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.4 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.4 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.4 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.3 GO:0047635 L-alanine:2-oxoglutarate aminotransferase activity(GO:0004021) alanine-oxo-acid transaminase activity(GO:0047635)
0.0 1.0 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 0.2 GO:0047780 citrate dehydratase activity(GO:0047780)
0.0 0.7 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.3 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.1 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.0 10.1 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 0.5 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.3 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 3.0 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 0.6 GO:0005249 voltage-gated potassium channel activity(GO:0005249)
0.0 2.0 GO:0004497 monooxygenase activity(GO:0004497)
0.0 1.0 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 1.9 GO:0030246 carbohydrate binding(GO:0030246)
0.0 0.2 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.0 0.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 1.4 GO:0015144 carbohydrate transmembrane transporter activity(GO:0015144)
0.0 0.1 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.2 GO:0002020 protease binding(GO:0002020)
0.0 0.8 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 0.2 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.3 GO:0015079 potassium ion transmembrane transporter activity(GO:0015079)
0.0 0.5 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.6 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.3 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 1.4 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.4 GO:0050897 cobalt ion binding(GO:0050897)
0.0 0.6 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 0.6 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.0 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.1 0.7 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.8 PID P73PATHWAY p73 transcription factor network
0.0 0.2 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.0 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.3 1.0 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.2 0.8 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.2 0.6 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.1 0.6 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.1 0.9 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.6 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.1 0.4 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.0 0.8 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.2 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.0 0.1 REACTOME LIPOPROTEIN METABOLISM Genes involved in Lipoprotein metabolism
0.0 0.2 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.0 0.2 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.0 0.6 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.0 0.1 REACTOME PROCESSIVE SYNTHESIS ON THE LAGGING STRAND Genes involved in Processive synthesis on the lagging strand