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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT4G25470

Z-value: 1.66

Transcription factors associated with AT4G25470

Gene Symbol Gene ID Gene Info
AT4G25470
AT4G25470 C-repeat/DRE binding factor 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
CBF2arTal_v1_Chr4_-_13016235_130162350.563.6e-02Click!

Activity profile of AT4G25470 motif

Sorted Z-values of AT4G25470 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr2_-_17712290_17712330 5.11 AT2G42540.2
AT2G42540.4
AT2G42540.1
AT2G42540.3
COR15A
cold-regulated 15a
arTal_v1_Chr5_+_5209717_5209717 4.28 AT5G15960.1
KIN1
stress-responsive protein (KIN1) / stress-induced protein (KIN1)
arTal_v1_Chr5_+_21240717_21240717 3.96 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
arTal_v1_Chr2_-_17710433_17710433 3.92 AT2G42530.1
COR15B
cold regulated 15b
arTal_v1_Chr1_+_3019639_3019639 3.91 AT1G09350.1
GolS3
galactinol synthase 3
arTal_v1_Chr5_+_5211719_5211719 3.70 AT5G15970.1
KIN2
stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)
arTal_v1_Chr1_+_3020221_3020221 3.69 AT1G09350.2
GolS3
galactinol synthase 3
arTal_v1_Chr1_-_5765798_5765798 3.34 AT1G16850.1
AT1G16850
transmembrane protein
arTal_v1_Chr4_-_15954803_15954803 3.22 AT4G33070.1
AT4G33070
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
arTal_v1_Chr4_+_14954204_14954204 2.93 AT4G30650.1
AT4G30650
Low temperature and salt responsive protein family
arTal_v1_Chr5_+_19481897_19481897 2.73 AT5G48070.1
XTH20
xyloglucan endotransglucosylase/hydrolase 20
arTal_v1_Chr3_+_18940643_18940643 2.60 AT3G50970.1
LTI30
dehydrin family protein
arTal_v1_Chr5_-_7054281_7054281 2.49 AT5G20830.3
SUS1
sucrose synthase 1
arTal_v1_Chr5_-_7054713_7054713 2.47 AT5G20830.1
SUS1
sucrose synthase 1
arTal_v1_Chr3_+_2441565_2441657 2.44 AT3G07650.4
AT3G07650.1
AT3G07650.3
AT3G07650.2
COL9
CONSTANS-like 9
arTal_v1_Chr5_-_7055398_7055398 2.43 AT5G20830.2
SUS1
sucrose synthase 1
arTal_v1_Chr4_+_12827856_12827937 2.43 AT4G24960.1
AT4G24960.3
AT4G24960.2
HVA22D
HVA22 homologue D
arTal_v1_Chr4_+_10707344_10707378 2.40 AT4G19690.2
AT4G19690.1
IRT1
iron-regulated transporter 1
arTal_v1_Chr2_+_15106940_15106940 2.34 AT2G35960.1
NHL12
NDR1/HIN1-like 12
arTal_v1_Chr1_-_17266724_17266824 2.32 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
arTal_v1_Chr3_-_8085669_8085669 2.22 AT3G22840.1
ELIP1
Chlorophyll A-B binding family protein
arTal_v1_Chr2_+_6950041_6950041 2.17 AT2G15970.2
COR413-PM1
cold regulated 413 plasma membrane 1
arTal_v1_Chr2_+_6949851_6949851 2.17 AT2G15970.1
COR413-PM1
cold regulated 413 plasma membrane 1
arTal_v1_Chr1_+_209208_209208 2.09 AT1G01580.1
FRO2
ferric reduction oxidase 2
arTal_v1_Chr1_+_208995_208995 2.08 AT1G01580.2
FRO2
ferric reduction oxidase 2
arTal_v1_Chr5_-_5759817_5759817 2.05 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
arTal_v1_Chr1_-_16917053_16917053 2.04 AT1G44800.1
SIAR1
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr1_+_23168767_23168767 2.03 AT1G62570.1
FMO GS-OX4
flavin-monooxygenase glucosinolate S-oxygenase 4
arTal_v1_Chr5_-_23301689_23301689 2.02 AT5G57530.1
XTH12
xyloglucan endotransglucosylase/hydrolase 12
arTal_v1_Chr3_-_1652149_1652149 1.99 AT3G05660.1
RLP33
receptor like protein 33
arTal_v1_Chr1_+_16263805_16263805 1.95 AT1G43160.1
RAP2.6
related to AP2 6
arTal_v1_Chr3_+_5025383_5025383 1.93 AT3G14940.2
PPC3
phosphoenolpyruvate carboxylase 3
arTal_v1_Chr3_+_5025184_5025184 1.92 AT3G14940.1
PPC3
phosphoenolpyruvate carboxylase 3
arTal_v1_Chr1_+_17766738_17766738 1.90 AT1G48100.1
AT1G48100
Pectin lyase-like superfamily protein
arTal_v1_Chr5_-_3728726_3728726 1.88 AT5G11590.1
TINY2
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_-_7089606_7089606 1.86 AT1G20450.1
AT1G20450.2
ERD10
Dehydrin family protein
arTal_v1_Chr3_+_17457614_17457614 1.85 AT3G47380.1
AT3G47380
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr1_-_7086873_7086873 1.82 AT1G20440.1
COR47
cold-regulated 47
arTal_v1_Chr4_-_18206684_18206684 1.81 AT4G39070.1
BZS1
B-box zinc finger family protein
arTal_v1_Chr2_-_18821889_18821889 1.80 AT2G45680.1
TCP9
TCP family transcription factor
arTal_v1_Chr1_-_27755297_27755297 1.75 AT1G73810.1
AT1G73810
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
arTal_v1_Chr3_-_20142763_20142763 1.75 AT3G54400.1
AT3G54400
Eukaryotic aspartyl protease family protein
arTal_v1_Chr4_+_10703348_10703348 1.69 AT4G19680.1
AT4G19680.2
IRT2
iron regulated transporter 2
arTal_v1_Chr3_-_19139423_19139423 1.67 AT3G51600.1
LTP5
lipid transfer protein 5
arTal_v1_Chr3_-_5845220_5845220 1.67 AT3G17130.1
AT3G17130
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr1_+_25701770_25701770 1.67 AT1G68500.1
AT1G68500
hypothetical protein
arTal_v1_Chr3_+_7275645_7275706 1.66 AT3G20810.1
AT3G20810.4
AT3G20810.2
AT3G20810.5
AT3G20810.3
JMJD5
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr4_-_13752103_13752103 1.65 AT4G27520.1
ENODL2
early nodulin-like protein 2
arTal_v1_Chr2_-_12415661_12415661 1.65 AT2G28900.1
OEP16-1
outer plastid envelope protein 16-1
arTal_v1_Chr5_+_3536189_3536189 1.60 AT5G11110.1
SPS2F
sucrose phosphate synthase 2F
arTal_v1_Chr4_+_10521259_10521379 1.58 AT4G19230.1
AT4G19230.2
CYP707A1
cytochrome P450, family 707, subfamily A, polypeptide 1
arTal_v1_Chr2_+_12706627_12706627 1.55 AT2G29740.1
UGT71C2
UDP-glucosyl transferase 71C2
arTal_v1_Chr5_-_7820760_7820760 1.51 AT5G23220.1
NIC3
nicotinamidase 3
arTal_v1_Chr5_-_17755742_17755768 1.45 AT5G44110.2
AT5G44110.4
AT5G44110.3
AT5G44110.1
ABCI21
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr1_-_3756998_3756998 1.44 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
arTal_v1_Chr3_-_4834015_4834015 1.42 AT3G14440.1
NCED3
nine-cis-epoxycarotenoid dioxygenase 3
arTal_v1_Chr5_-_5759449_5759449 1.40 AT5G17460.4
AT5G17460.5
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
arTal_v1_Chr1_+_29354944_29354944 1.40 AT1G78070.1
AT1G78070
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr5_-_1994824_1994961 1.38 AT5G06530.2
AT5G06530.3
AT5G06530.4
AT5G06530.1
ABCG22
ABC-2 type transporter family protein
arTal_v1_Chr2_+_9592956_9592956 1.37 AT2G22590.1
AT2G22590
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr1_-_8189220_8189234 1.37 AT1G23090.4
AT1G23090.1
AT1G23090.3
AT1G23090.2
AST91
sulfate transporter 91
arTal_v1_Chr3_-_565801_565801 1.37 AT3G02640.1
AT3G02640
transmembrane protein
arTal_v1_Chr1_+_27628678_27628678 1.36 AT1G73480.1
AT1G73480
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_+_4105223_4105223 1.36 AT1G12110.1
NRT1.1
nitrate transporter 1.1
arTal_v1_Chr3_+_5720941_5721030 1.35 AT3G16800.5
AT3G16800.4
AT3G16800.2
AT3G16800.6
AT3G16800.1
AT3G16800
Protein phosphatase 2C family protein
arTal_v1_Chr5_-_2090430_2090430 1.35 AT5G06760.1
LEA4-5
Late Embryogenesis Abundant 4-5
arTal_v1_Chr5_-_17022723_17022723 1.34 AT5G42570.1
AT5G42570
B-cell receptor-associated 31-like protein
arTal_v1_Chr2_-_18095093_18095093 1.34 AT2G43620.1
AT2G43620
Chitinase family protein
arTal_v1_Chr5_-_20111806_20111806 1.34 AT5G49560.1
AT5G49560
Putative methyltransferase family protein
arTal_v1_Chr4_+_5244865_5244865 1.34 AT4G08300.1
UMAMIT17
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr5_+_7328870_7328870 1.33 AT5G22100.1
AT5G22100
RNA cyclase family protein
arTal_v1_Chr1_+_16646696_16646817 1.33 AT1G43890.1
AT1G43890.2
AT1G43890.3
RAB18
RAB GTPASE HOMOLOG B18
arTal_v1_Chr2_+_13580371_13580371 1.33 AT2G31940.1
AT2G31940
oxidoreductase/transition metal ion-binding protein
arTal_v1_Chr1_+_24109538_24109538 1.33 AT1G64890.1
AT1G64890
Major facilitator superfamily protein
arTal_v1_Chr3_-_7557969_7557969 1.31 AT3G21460.1
AT3G21460
Glutaredoxin family protein
arTal_v1_Chr5_+_2167468_2167536 1.31 AT5G06980.4
AT5G06980.3
AT5G06980.5
AT5G06980.2
AT5G06980
hypothetical protein
arTal_v1_Chr5_+_23883356_23883356 1.30 AT5G59180.1
NRPB7
DNA-directed RNA polymerase II
arTal_v1_Chr1_-_5645443_5645443 1.30 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_+_1529767_1529767 1.29 AT1G05260.1
RCI3
Peroxidase superfamily protein
arTal_v1_Chr2_+_7513128_7513130 1.29 AT2G17280.2
AT2G17280.1
AT2G17280
Phosphoglycerate mutase family protein
arTal_v1_Chr1_-_10184512_10184512 1.28 AT1G29160.1
AT1G29160
Dof-type zinc finger DNA-binding family protein
arTal_v1_Chr2_-_19370478_19370478 1.27 AT2G47180.1
GolS1
galactinol synthase 1
arTal_v1_Chr5_-_25866972_25867025 1.26 AT5G64700.2
AT5G64700.1
UMAMIT21
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr1_-_8414886_8414886 1.26 AT1G23800.1
AT1G23800.2
ALDH2B7
aldehyde dehydrogenase 2B7
arTal_v1_Chr5_+_5092140_5092140 1.25 AT5G15650.1
RGP2
reversibly glycosylated polypeptide 2
arTal_v1_Chr1_+_29356346_29356382 1.24 AT1G78070.2
AT1G78070.3
AT1G78070
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_+_2524023_2524023 1.23 AT1G08090.1
NRT2:1
nitrate transporter 2:1
arTal_v1_Chr4_+_12317036_12317173 1.22 AT4G23630.1
AT4G23630.2
BTI1
VIRB2-interacting protein 1
arTal_v1_Chr2_+_9841842_9841842 1.22 AT2G23120.1
AT2G23120
Late embryogenesis abundant protein, group 6
arTal_v1_Chr1_+_18198227_18198227 1.22 AT1G49200.1
AT1G49200
RING/U-box superfamily protein
arTal_v1_Chr5_+_2167120_2167120 1.21 AT5G06980.1
AT5G06980
hypothetical protein
arTal_v1_Chr3_+_16138375_16138375 1.21 AT3G44550.2
FAR5
fatty acid reductase 5
arTal_v1_Chr1_+_9668508_9668601 1.18 AT1G27760.3
AT1G27760.1
AT1G27760.2
SAT32
interferon-related developmental regulator family protein / IFRD protein family
arTal_v1_Chr1_+_2848149_2848149 1.16 AT1G08890.1
AT1G08890
Major facilitator superfamily protein
arTal_v1_Chr2_-_16804823_16804823 1.16 AT2G40230.1
AT2G40230
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_-_23737335_23737335 1.16 AT5G58780.1
cPT5
Undecaprenyl pyrophosphate synthetase family protein
arTal_v1_Chr4_+_11773221_11773221 1.15 AT4G22270.2
AT4G22270.1
MRB1
transmembrane protein, putative (DUF3537)
arTal_v1_Chr3_+_16137576_16137576 1.15 AT3G44550.1
FAR5
fatty acid reductase 5
arTal_v1_Chr1_-_19683565_19683565 1.15 AT1G52855.1
AT1G52855
hypothetical protein
arTal_v1_Chr2_-_7757875_7757929 1.15 AT2G17840.2
AT2G17840.1
ERD7
Senescence/dehydration-associated protein-like protein
arTal_v1_Chr3_+_5721225_5721225 1.14 AT3G16800.3
AT3G16800
Protein phosphatase 2C family protein
arTal_v1_Chr1_-_30142697_30142697 1.13 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_+_2563366_2563366 1.12 AT5G08000.1
AT5G08000.2
E13L3
glucan endo-1,3-beta-glucosidase-like protein 3
arTal_v1_Chr1_-_23487091_23487091 1.12 AT1G63310.1
AT1G63310
hypothetical protein
arTal_v1_Chr4_+_8054861_8054863 1.12 AT4G13940.4
AT4G13940.3
AT4G13940.2
HOG1
S-adenosyl-L-homocysteine hydrolase
arTal_v1_Chr3_+_19880504_19880504 1.10 AT3G53620.1
PPa4
pyrophosphorylase 4
arTal_v1_Chr4_+_8054673_8054673 1.10 AT4G13940.1
HOG1
S-adenosyl-L-homocysteine hydrolase
arTal_v1_Chr5_+_2132350_2132350 1.09 AT5G06860.1
PGIP1
polygalacturonase inhibiting protein 1
arTal_v1_Chr2_+_8183638_8183638 1.09 AT2G18890.1
AT2G18890.3
AT2G18890
Protein kinase superfamily protein
arTal_v1_Chr5_+_7718118_7718118 1.08 AT5G23020.1
IMS2
2-isopropylmalate synthase 2
arTal_v1_Chr1_-_19464434_19464434 1.07 AT1G52270.1
AT1G52270
hypothetical protein
arTal_v1_Chr5_+_4438200_4438200 1.06 AT5G13750.4
AT5G13750.3
ZIFL1
zinc induced facilitator-like 1
arTal_v1_Chr5_+_17973775_17973775 1.06 AT5G44575.1
AT5G44575
hypothetical protein
arTal_v1_Chr5_-_1742161_1742186 1.06 AT5G05790.2
AT5G05790.1
AT5G05790
Duplicated homeodomain-like superfamily protein
arTal_v1_Chr3_-_9464676_9464676 1.05 AT3G25870.1
AT3G25870
hypothetical protein
arTal_v1_Chr1_+_9378404_9378404 1.05 AT1G27020.1
AT1G27020
plant/protein
arTal_v1_Chr5_-_16667171_16667171 1.05 AT5G41670.2
AT5G41670.3
AT5G41670
6-phosphogluconate dehydrogenase family protein
arTal_v1_Chr5_-_16667390_16667390 1.04 AT5G41670.1
AT5G41670.4
AT5G41670
6-phosphogluconate dehydrogenase family protein
arTal_v1_Chr3_-_8125931_8125931 1.03 AT3G22930.1
AT3G22930.2
CML11
calmodulin-like 11
arTal_v1_Chr5_-_17861150_17861150 1.03 AT5G44340.1
TUB4
tubulin beta chain 4
arTal_v1_Chr1_+_18416474_18416475 1.03 AT1G49760.2
AT1G49760.1
PAB8
poly(A) binding protein 8
arTal_v1_Chr1_-_156011_156011 1.03 AT1G01420.1
UGT72B3
UDP-glucosyl transferase 72B3
arTal_v1_Chr3_+_1795145_1795145 1.03 AT3G05980.1
AT3G05980
hypothetical protein
arTal_v1_Chr3_-_4496800_4496800 1.03 AT3G13720.1
PRA8
PRA1 (Prenylated rab acceptor) family protein
arTal_v1_Chr5_+_16624157_16624157 1.02 AT5G41570.1
WRKY24
WRKY DNA-binding protein 24
arTal_v1_Chr5_+_8037798_8037798 1.01 AT5G23850.1
AT5G23850
O-glucosyltransferase rumi-like protein (DUF821)
arTal_v1_Chr1_-_156178_156178 1.01 AT1G01420.2
UGT72B3
UDP-glucosyl transferase 72B3
arTal_v1_Chr1_+_3469512_3469580 1.01 AT1G10522.1
AT1G10522.2
PRIN2
Serine/Threonine-kinase
arTal_v1_Chr1_-_19250823_19250863 1.01 AT1G51840.1
AT1G51840.3
AT1G51840.4
AT1G51840.5
AT1G51840.2
AT1G51840
kinase-like protein
arTal_v1_Chr2_-_17199320_17199454 1.01 AT2G41240.2
AT2G41240.1
BHLH100
basic helix-loop-helix protein 100
arTal_v1_Chr2_-_8192536_8192536 1.01 AT2G18900.1
AT2G18900
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr3_-_20903080_20903080 0.98 AT3G56370.1
AT3G56370
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr2_-_15955752_15955752 0.98 AT2G38110.1
GPAT6
glycerol-3-phosphate acyltransferase 6
arTal_v1_Chr5_+_4438645_4438645 0.98 AT5G13750.2
ZIFL1
zinc induced facilitator-like 1
arTal_v1_Chr2_-_18744322_18744322 0.98 AT2G45470.1
FLA8
FASCICLIN-like arabinogalactan protein 8
arTal_v1_Chr2_+_18537177_18537177 0.97 AT2G44940.1
AT2G44940
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_-_19312595_19312595 0.97 AT5G47650.1
AT5G47650.2
NUDT2
nudix hydrolase homolog 2
arTal_v1_Chr4_-_17530589_17530589 0.97 AT4G37250.1
AT4G37250
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr3_-_6212551_6212551 0.97 AT3G18130.1
RACK1C_AT
receptor for activated C kinase 1C
arTal_v1_Chr5_+_4437804_4437804 0.96 AT5G13750.1
ZIFL1
zinc induced facilitator-like 1
arTal_v1_Chr4_-_15017365_15017365 0.96 AT4G30830.1
AT4G30830
myosin-like protein (Protein of unknown function, DUF593)
arTal_v1_Chr2_+_5671396_5671396 0.95 AT2G13600.1
SLO2
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr2_-_14677398_14677398 0.95 AT2G34790.1
MEE23
FAD-binding Berberine family protein
arTal_v1_Chr3_-_8807460_8807460 0.95 AT3G24300.1
AMT1%3B3
ammonium transporter 1;3
arTal_v1_Chr4_-_13761603_13761603 0.94 AT4G27560.1
AT4G27560
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr1_-_11595982_11596056 0.94 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_+_5087219_5087219 0.93 AT5G15640.1
AT5G15640.2
AT5G15640
Mitochondrial substrate carrier family protein
arTal_v1_Chr3_-_5173001_5173105 0.91 AT3G15354.4
AT3G15354.1
AT3G15354.2
AT3G15354.3
SPA3
SPA1-related 3
arTal_v1_Chr5_-_21889254_21889254 0.91 AT5G53905.1
AT5G53905
prolamin-like protein
arTal_v1_Chr1_-_20971742_20971742 0.91 AT1G56070.1
AT1G56070.2
AT1G56070.3
LOS1
Ribosomal protein S5/Elongation factor G/III/V family protein
arTal_v1_Chr1_+_8720309_8720309 0.91 AT1G24600.1
AT1G24600
hypothetical protein
arTal_v1_Chr2_+_8183879_8183879 0.91 AT2G18890.2
AT2G18890
Protein kinase superfamily protein
arTal_v1_Chr1_+_5136874_5136874 0.90 AT1G14890.1
AT1G14890
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr3_+_8603212_8603212 0.90 AT3G23820.1
GAE6
UDP-D-glucuronate 4-epimerase 6
arTal_v1_Chr1_-_9451768_9451768 0.90 AT1G27200.1
AT1G27200
glycosyltransferase family protein (DUF23)
arTal_v1_Chr1_-_29239484_29239484 0.90 AT1G77760.1
NIA1
nitrate reductase 1
arTal_v1_Chr4_-_17267472_17267472 0.89 AT4G36610.1
AT4G36610
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_+_116784_116784 0.89 AT1G01300.1
AT1G01300
Eukaryotic aspartyl protease family protein
arTal_v1_Chr1_+_21652988_21652988 0.89 AT1G58340.1
ZF14
MATE efflux family protein
arTal_v1_Chr5_+_9835884_9835884 0.88 AT5G27770.1
AT5G27770
Ribosomal L22e protein family
arTal_v1_Chr3_+_8480025_8480025 0.88 AT3G23620.1
AT3G23620
Ribosomal RNA processing Brix domain protein
arTal_v1_Chr5_-_24456115_24456115 0.88 AT5G60790.1
ABCF1
ABC transporter family protein
arTal_v1_Chr2_-_18956582_18956582 0.87 AT2G46110.1
KPHMT1
ketopantoate hydroxymethyltransferase 1
arTal_v1_Chr2_-_12621231_12621231 0.87 AT2G29440.1
GSTU6
glutathione S-transferase tau 6
arTal_v1_Chr4_+_8937358_8937358 0.87 AT4G15700.1
AT4G15700
Thioredoxin superfamily protein
arTal_v1_Chr3_+_1727151_1727151 0.87 AT3G05800.1
AIF1
AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1
arTal_v1_Chr5_+_23439498_23439500 0.86 AT5G57870.2
AT5G57870.1
eIFiso4G1
MIF4G domain-containing protein / MA3 domain-containing protein
arTal_v1_Chr3_+_9066601_9066793 0.86 AT3G24840.2
AT3G24840.3
AT3G24840.1
AT3G24840.5
AT3G24840.4
AT3G24840.6
AT3G24840.7
AT3G24840
Sec14p-like phosphatidylinositol transfer family protein
arTal_v1_Chr1_+_23730106_23730106 0.86 AT1G63940.4
AT1G63940.3
MDAR6
monodehydroascorbate reductase 6
arTal_v1_Chr1_+_23729875_23729922 0.86 AT1G63940.2
AT1G63940.1
MDAR6
monodehydroascorbate reductase 6
arTal_v1_Chr5_+_18042935_18042971 0.86 AT5G44720.1
AT5G44720.2
AT5G44720
Molybdenum cofactor sulfurase family protein
arTal_v1_Chr1_-_12224000_12224108 0.86 AT1G33720.5
AT1G33720.1
AT1G33720.3
AT1G33720.2
AT1G33720.4
CYP76C6
cytochrome P450, family 76, subfamily C, polypeptide 6
arTal_v1_Chr2_+_12697226_12697226 0.85 AT2G29700.1
PH1
pleckstrin homologue 1
arTal_v1_Chr4_+_12660687_12660687 0.85 AT4G24510.1
CER2
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_+_309374_309434 0.85 AT5G01810.1
AT5G01810.2
AT5G01810.3
CIPK15
CBL-interacting protein kinase 15
arTal_v1_Chr1_+_6763765_6763915 0.85 AT1G19530.1
AT1G19530.2
AT1G19530
DNA polymerase epsilon catalytic subunit A
arTal_v1_Chr4_-_8050157_8050157 0.85 AT4G13930.1
SHM4
serine hydroxymethyltransferase 4
arTal_v1_Chr4_+_13511837_13511837 0.84 AT4G26890.1
MAPKKK16
mitogen-activated protein kinase kinase kinase 16
arTal_v1_Chr1_-_6506542_6506542 0.84 AT1G18850.1
AT1G18850
hypothetical protein
arTal_v1_Chr3_+_20747629_20747629 0.84 AT3G55940.1
AT3G55940
Phosphoinositide-specific phospholipase C family protein
arTal_v1_Chr3_-_2264721_2264721 0.83 AT3G07150.1
AT3G07150
amino acid-ligase
arTal_v1_Chr3_+_51496_51542 0.83 AT3G01150.1
AT3G01150.3
AT3G01150.2
AT3G01150.4
PTB1
polypyrimidine tract-binding protein 1
arTal_v1_Chr2_-_16563441_16563441 0.83 AT2G39710.1
AT2G39710
Eukaryotic aspartyl protease family protein
arTal_v1_Chr3_-_21402899_21402940 0.83 AT3G57780.5
AT3G57780.4
AT3G57780.3
AT3G57780
nucleolar-like protein
arTal_v1_Chr1_+_23337167_23337167 0.82 AT1G62990.1
KNAT7
homeobox knotted-like protein
arTal_v1_Chr3_+_22340859_22340891 0.82 AT3G60450.2
AT3G60450.1
AT3G60450
Phosphoglycerate mutase family protein
arTal_v1_Chr1_-_11719988_11719988 0.82 AT1G32450.1
NRT1.5
nitrate transporter 1.5
arTal_v1_Chr5_+_4087689_4087689 0.82 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr3_+_23420145_23420145 0.82 AT3G63430.2
AT3G63430.1
TRM5
zinc finger CCCH domain protein
arTal_v1_Chr1_-_8559066_8559066 0.82 AT1G24170.1
LGT9
Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr5_-_19312155_19312222 0.81 AT5G47650.5
AT5G47650.4
NUDT2
nudix hydrolase homolog 2
arTal_v1_Chr4_+_16931003_16931003 0.81 AT4G35730.1
AT4G35730
Regulator of Vps4 activity in the MVB pathway protein
arTal_v1_Chr5_+_22603302_22603376 0.81 AT5G55850.3
AT5G55850.1
AT5G55850.2
NOI
RPM1-interacting protein 4 (RIN4) family protein
arTal_v1_Chr1_-_638681_638681 0.80 AT1G02870.1
AT1G02870
nucleolar-like protein
arTal_v1_Chr4_-_304508_304612 0.80 AT4G00730.2
AT4G00730.1
ANL2
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
arTal_v1_Chr1_+_28291698_28291698 0.80 AT1G75390.1
AT1G75390.2
bZIP44
basic leucine-zipper 44
arTal_v1_Chr1_+_10147605_10147605 0.80 AT1G29060.2
AT1G29060.1
AT1G29060
Target SNARE coiled-coil domain protein
arTal_v1_Chr4_-_15016977_15016977 0.80 AT4G30830.2
AT4G30830
myosin-like protein (Protein of unknown function, DUF593)
arTal_v1_Chr2_-_13373862_13373862 0.80 AT2G31360.1
ADS2
16:0delta9 desaturase 2
arTal_v1_Chr2_-_13374018_13374018 0.80 AT2G31360.2
ADS2
16:0delta9 desaturase 2

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G25470

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 7.4 GO:0072708 response to sorbitol(GO:0072708)
0.8 3.3 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.7 6.7 GO:0009819 drought recovery(GO:0009819)
0.7 2.8 GO:0019322 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.6 2.4 GO:0015675 nickel cation transport(GO:0015675)
0.5 2.1 GO:0010507 negative regulation of autophagy(GO:0010507)
0.4 0.9 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.4 1.3 GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) positive regulation of mRNA catabolic process(GO:0061014) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.4 2.1 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.4 0.8 GO:2000736 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.4 1.2 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.4 2.2 GO:0070141 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.4 1.1 GO:0045002 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.3 9.4 GO:0006012 galactose metabolic process(GO:0006012)
0.3 18.6 GO:0009631 cold acclimation(GO:0009631)
0.3 1.8 GO:1900458 negative regulation of brassinosteroid mediated signaling pathway(GO:1900458)
0.3 4.0 GO:0009608 response to symbiont(GO:0009608)
0.3 0.3 GO:0098609 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.3 2.0 GO:0043090 amino acid import(GO:0043090)
0.3 1.1 GO:0071836 nectar secretion(GO:0071836)
0.2 0.7 GO:0019367 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.2 2.4 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.2 1.2 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.2 0.7 GO:2000653 regulation of genetic imprinting(GO:2000653)
0.2 0.9 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.2 0.9 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.2 0.7 GO:1901031 regulation of oxidoreductase activity(GO:0051341) regulation of response to reactive oxygen species(GO:1901031)
0.2 0.6 GO:0016540 protein autoprocessing(GO:0016540)
0.2 0.4 GO:0015802 basic amino acid transport(GO:0015802)
0.2 0.6 GO:0006057 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506) response to cobalt ion(GO:0032025)
0.2 0.6 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.2 1.4 GO:0010148 transpiration(GO:0010148)
0.2 0.6 GO:0042539 hypotonic salinity response(GO:0042539)
0.2 0.8 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
0.2 0.6 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.2 0.6 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.2 0.7 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.2 1.8 GO:0006826 iron ion transport(GO:0006826)
0.2 0.4 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.2 0.7 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.2 0.9 GO:0015940 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.2 0.5 GO:0015755 hexose transport(GO:0008645) fructose transport(GO:0015755)
0.2 3.0 GO:0010540 basipetal auxin transport(GO:0010540)
0.2 2.2 GO:0071329 cellular response to sucrose stimulus(GO:0071329)
0.2 1.7 GO:0006482 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.2 0.5 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.2 2.8 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.2 1.8 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.2 2.1 GO:0010158 abaxial cell fate specification(GO:0010158)
0.2 1.0 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.2 0.8 GO:0043479 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.2 0.6 GO:0034635 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.2 1.4 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.2 0.8 GO:0046622 positive regulation of organ growth(GO:0046622)
0.2 0.5 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.2 5.9 GO:0055072 iron ion homeostasis(GO:0055072)
0.2 0.6 GO:0006024 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.1 0.4 GO:0032978 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.1 0.7 GO:0006884 cell volume homeostasis(GO:0006884)
0.1 0.7 GO:1901562 response to paraquat(GO:1901562)
0.1 0.5 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.1 0.5 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 1.9 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.1 1.1 GO:0010315 auxin efflux(GO:0010315)
0.1 0.5 GO:1902751 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.1 1.3 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.1 0.8 GO:1904481 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.1 0.4 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 0.3 GO:0072530 GDP-mannose transport(GO:0015784) purine-containing compound transmembrane transport(GO:0072530) purine nucleotide-sugar transmembrane transport(GO:0090480) GDP-mannose transmembrane transport(GO:1990570)
0.1 1.0 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 0.3 GO:0042891 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.1 0.4 GO:0046440 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.1 0.3 GO:0030100 regulation of endocytosis(GO:0030100)
0.1 0.4 GO:0097438 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.1 0.8 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.1 0.2 GO:0071486 cellular response to high light intensity(GO:0071486)
0.1 0.4 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 1.3 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 0.5 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.1 0.4 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.1 4.9 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.1 0.9 GO:0071451 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.1 1.3 GO:0006108 malate metabolic process(GO:0006108)
0.1 0.5 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 6.0 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 0.3 GO:0009663 plasmodesma organization(GO:0009663)
0.1 0.3 GO:0048577 negative regulation of short-day photoperiodism, flowering(GO:0048577)
0.1 0.6 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 1.5 GO:0006538 glutamate catabolic process(GO:0006538)
0.1 0.8 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.1 0.4 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.1 0.5 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.1 0.4 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.1 0.3 GO:0010254 nectary development(GO:0010254) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.1 0.5 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.1 0.4 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.1 0.7 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.1 0.2 GO:0090239 transposition(GO:0032196) heterochromatin maintenance(GO:0070829) regulation of histone H4 acetylation(GO:0090239)
0.1 0.3 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.1 0.6 GO:0051693 negative regulation of actin filament depolymerization(GO:0030835) actin filament capping(GO:0051693)
0.1 3.6 GO:0016144 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.1 0.6 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.1 0.5 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.1 1.0 GO:0009209 CTP biosynthetic process(GO:0006241) pyrimidine ribonucleoside triphosphate metabolic process(GO:0009208) pyrimidine ribonucleoside triphosphate biosynthetic process(GO:0009209) CTP metabolic process(GO:0046036)
0.1 0.7 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.1 0.5 GO:0051592 response to calcium ion(GO:0051592)
0.1 0.5 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)
0.1 4.7 GO:0006972 hyperosmotic response(GO:0006972)
0.1 0.8 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.1 1.6 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 1.3 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.1 0.7 GO:0045116 protein neddylation(GO:0045116)
0.1 0.2 GO:0046102 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.1 0.1 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 0.7 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.1 1.1 GO:0080156 mitochondrial mRNA modification(GO:0080156)
0.1 1.2 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.1 0.9 GO:0051555 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.1 0.7 GO:0010093 specification of floral organ identity(GO:0010093)
0.1 0.2 GO:0002188 translation reinitiation(GO:0002188)
0.1 0.2 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.1 0.3 GO:0060321 acceptance of pollen(GO:0060321)
0.1 0.3 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.1 0.5 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.1 1.0 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.1 0.3 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.1 0.2 GO:0015739 sialic acid transport(GO:0015739)
0.1 1.0 GO:0035265 organ growth(GO:0035265)
0.1 0.4 GO:0009061 anaerobic respiration(GO:0009061)
0.1 0.3 GO:0048530 fruit morphogenesis(GO:0048530)
0.1 0.2 GO:0033306 phytol metabolic process(GO:0033306) fatty alcohol metabolic process(GO:1903173)
0.1 0.6 GO:1902074 response to salt(GO:1902074)
0.0 0.7 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.0 0.5 GO:0016558 protein monoubiquitination(GO:0006513) protein import into peroxisome matrix(GO:0016558)
0.0 0.2 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.0 0.2 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.9 GO:0019374 galactolipid metabolic process(GO:0019374)
0.0 1.8 GO:0009247 glycolipid biosynthetic process(GO:0009247)
0.0 0.4 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.0 0.5 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 0.4 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.0 1.1 GO:0009593 detection of chemical stimulus(GO:0009593)
0.0 1.3 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.4 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.3 GO:1902969 mitotic DNA replication(GO:1902969)
0.0 0.3 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 1.4 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.6 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.0 0.4 GO:0046083 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.0 0.4 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.0 0.3 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.0 0.6 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.0 0.2 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.0 0.2 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.0 0.1 GO:0006591 ornithine metabolic process(GO:0006591)
0.0 2.2 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.3 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.3 GO:0048575 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.0 0.3 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.2 GO:0072531 pyrimidine-containing compound transmembrane transport(GO:0072531) pyrimidine nucleotide-sugar transmembrane transport(GO:0090481)
0.0 0.4 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.5 GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.0 0.1 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.1 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.0 1.1 GO:0000741 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 0.3 GO:0017183 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.3 GO:0050665 hydrogen peroxide biosynthetic process(GO:0050665)
0.0 0.1 GO:0060149 negative regulation of posttranscriptional gene silencing(GO:0060149)
0.0 0.5 GO:0045927 positive regulation of growth(GO:0045927)
0.0 0.2 GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.0 0.3 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.8 GO:0046467 sphingolipid biosynthetic process(GO:0030148) membrane lipid biosynthetic process(GO:0046467)
0.0 0.2 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.0 0.3 GO:0010047 fruit dehiscence(GO:0010047)
0.0 0.3 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.0 0.7 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.6 GO:0032880 regulation of protein localization(GO:0032880)
0.0 0.4 GO:0036297 interstrand cross-link repair(GO:0036297)
0.0 0.4 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.7 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.0 0.6 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.1 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system(GO:0010201) response to very low fluence red light stimulus(GO:0010203)
0.0 0.2 GO:0080183 response to photooxidative stress(GO:0080183)
0.0 0.2 GO:0006283 transcription-coupled nucleotide-excision repair(GO:0006283)
0.0 0.1 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 0.2 GO:0006559 L-phenylalanine catabolic process(GO:0006559) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.0 0.1 GO:0015824 proline transport(GO:0015824)
0.0 0.1 GO:0010071 root meristem specification(GO:0010071)
0.0 0.3 GO:0007008 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0 0.3 GO:0051782 negative regulation of cell division(GO:0051782)
0.0 0.4 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.0 0.1 GO:0006567 threonine catabolic process(GO:0006567)
0.0 0.3 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.6 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 0.1 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.0 0.1 GO:0006097 glyoxylate cycle(GO:0006097)
0.0 0.3 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.5 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.4 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.0 0.2 GO:0009638 phototropism(GO:0009638)
0.0 0.3 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.3 GO:0051568 histone H3-K4 methylation(GO:0051568)
0.0 0.3 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.4 GO:0009785 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 0.4 GO:0031167 rRNA methylation(GO:0031167)
0.0 0.3 GO:0071428 ribosomal subunit export from nucleus(GO:0000054) ribosome localization(GO:0033750) establishment of ribosome localization(GO:0033753) rRNA-containing ribonucleoprotein complex export from nucleus(GO:0071428)
0.0 0.5 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.6 GO:0010091 trichome branching(GO:0010091)
0.0 0.6 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.7 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 1.8 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 5.2 GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process(GO:0043161)
0.0 0.1 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.0 0.1 GO:1903008 organelle disassembly(GO:1903008)
0.0 1.6 GO:0045490 pectin catabolic process(GO:0045490)
0.0 1.0 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.5 GO:0006914 autophagy(GO:0006914)
0.0 0.7 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.3 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.5 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.1 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 0.2 GO:0006265 DNA topological change(GO:0006265)
0.0 0.1 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.4 GO:2000031 regulation of salicylic acid mediated signaling pathway(GO:2000031)
0.0 0.1 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.1 GO:0000919 cell plate assembly(GO:0000919)
0.0 0.1 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.0 0.4 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.4 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.2 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 0.1 GO:0015074 DNA integration(GO:0015074)
0.0 0.1 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.0 1.1 GO:0009630 gravitropism(GO:0009630)
0.0 0.5 GO:0006749 glutathione metabolic process(GO:0006749)
0.0 0.4 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.5 GO:0009846 pollen germination(GO:0009846)
0.0 0.4 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.4 GO:0009853 photorespiration(GO:0009853)
0.0 1.3 GO:0006486 protein glycosylation(GO:0006486) macromolecule glycosylation(GO:0043413)
0.0 0.2 GO:0030042 actin filament depolymerization(GO:0030042)
0.0 0.7 GO:0019932 second-messenger-mediated signaling(GO:0019932)
0.0 0.1 GO:0080060 integument development(GO:0080060)
0.0 0.1 GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.0 0.1 GO:0070129 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.0 0.2 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.1 GO:0031352 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.2 1.4 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.2 0.2 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.2 0.7 GO:0034715 pICln-Sm protein complex(GO:0034715)
0.2 0.5 GO:1990429 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.2 2.1 GO:0071782 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.2 1.2 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.2 0.5 GO:0005775 vacuolar lumen(GO:0005775)
0.2 0.6 GO:0010330 cellulose synthase complex(GO:0010330)
0.2 0.5 GO:0030896 checkpoint clamp complex(GO:0030896)
0.2 0.5 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 0.7 GO:0005719 nuclear euchromatin(GO:0005719)
0.1 0.7 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.1 1.1 GO:0035861 site of double-strand break(GO:0035861)
0.1 0.4 GO:0034457 Mpp10 complex(GO:0034457)
0.1 0.6 GO:0031429 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.1 0.4 GO:0032045 guanyl-nucleotide exchange factor complex(GO:0032045)
0.1 0.4 GO:0005845 mRNA cap binding complex(GO:0005845)
0.1 0.3 GO:0016328 lateral plasma membrane(GO:0016328)
0.1 0.8 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 0.9 GO:0017119 Golgi transport complex(GO:0017119)
0.1 0.3 GO:0033185 mannosyltransferase complex(GO:0031501) dolichol-phosphate-mannose synthase complex(GO:0033185)
0.1 1.0 GO:0045298 tubulin complex(GO:0045298)
0.1 0.7 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 0.4 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.1 0.8 GO:0005663 DNA replication factor C complex(GO:0005663)
0.1 0.9 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.1 0.7 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.1 0.3 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.1 0.4 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.1 1.3 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.1 3.2 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 5.1 GO:0000138 Golgi trans cisterna(GO:0000138)
0.1 0.4 GO:0055037 recycling endosome(GO:0055037)
0.1 0.2 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.1 0.2 GO:1990752 microtubule plus-end(GO:0035371) microtubule end(GO:1990752)
0.1 0.2 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.0 0.3 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.0 0.4 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.0 0.5 GO:0005765 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 0.2 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 0.7 GO:0005769 early endosome(GO:0005769)
0.0 0.5 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.2 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.0 0.5 GO:0008180 COP9 signalosome(GO:0008180)
0.0 0.5 GO:0030134 ER to Golgi transport vesicle(GO:0030134)
0.0 0.5 GO:0045281 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.0 6.1 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 4.0 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 3.1 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 0.3 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.1 GO:0030681 nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.0 3.9 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.3 GO:0005682 U5 snRNP(GO:0005682)
0.0 0.1 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.4 GO:0030131 clathrin adaptor complex(GO:0030131)
0.0 0.4 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.4 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 0.4 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 12.0 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.6 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.5 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.7 GO:0009504 cell plate(GO:0009504)
0.0 0.3 GO:0000347 THO complex(GO:0000347)
0.0 0.5 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 1.0 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.2 GO:0031209 SCAR complex(GO:0031209)
0.0 0.5 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 18.9 GO:0005794 Golgi apparatus(GO:0005794)
0.0 0.6 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 0.1 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.0 0.2 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.0 7.0 GO:0005783 endoplasmic reticulum(GO:0005783)
0.0 0.2 GO:0000786 nucleosome(GO:0000786)
0.0 3.5 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.0 1.0 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 40.9 GO:0005829 cytosol(GO:0005829)
0.0 0.5 GO:0009528 plastid inner membrane(GO:0009528)
0.0 0.2 GO:0000178 exosome (RNase complex)(GO:0000178)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 8.9 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.9 2.7 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.8 3.9 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.6 2.4 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.5 1.5 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.5 8.6 GO:0016157 sucrose synthase activity(GO:0016157)
0.4 1.3 GO:0008936 nicotinamidase activity(GO:0008936)
0.4 4.1 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.4 1.1 GO:0070336 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.3 1.4 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.3 1.0 GO:0005078 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.3 9.3 GO:0048029 monosaccharide binding(GO:0048029)
0.3 0.9 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.3 0.9 GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity(GO:0003864)
0.3 1.1 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.3 5.1 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.3 2.0 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.2 1.7 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.2 1.4 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.2 0.7 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.2 0.7 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.2 0.9 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.2 0.7 GO:0019788 NEDD8 transferase activity(GO:0019788)
0.2 1.9 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.2 0.6 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.2 0.6 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.2 1.2 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.2 0.6 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.2 1.4 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.2 0.8 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.2 0.6 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.2 0.7 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.2 0.5 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.2 0.7 GO:0009885 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.2 3.8 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.2 1.0 GO:0030544 Hsp70 protein binding(GO:0030544)
0.2 0.5 GO:0019776 Atg8 ligase activity(GO:0019776) Atg8 activating enzyme activity(GO:0019779)
0.2 0.5 GO:0051669 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.2 2.0 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.2 1.1 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.2 1.3 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.2 0.6 GO:0050347 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.2 0.5 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.2 1.1 GO:0008022 protein C-terminus binding(GO:0008022)
0.2 0.6 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.2 0.8 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.1 0.9 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 1.5 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.1 0.9 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.5 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.1 0.4 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 0.4 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.1 0.4 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.1 1.2 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 1.5 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.1 1.7 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.1 0.8 GO:0015120 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.1 0.5 GO:0005353 fructose transmembrane transporter activity(GO:0005353)
0.1 1.0 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.6 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 1.1 GO:0009922 fatty acid elongase activity(GO:0009922)
0.1 0.8 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.4 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.1 0.6 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.8 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.1 0.6 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.1 3.8 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.1 0.2 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.1 0.3 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)
0.1 1.0 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 2.9 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.6 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.1 0.4 GO:0016748 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.1 1.3 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 0.4 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.1 0.5 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.1 0.5 GO:0035197 siRNA binding(GO:0035197)
0.1 0.4 GO:0016882 cyclo-ligase activity(GO:0016882)
0.1 0.3 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.1 1.6 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.1 0.4 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.1 1.2 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.1 1.6 GO:0031369 translation initiation factor binding(GO:0031369)
0.1 0.4 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.1 0.4 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.1 0.8 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 0.3 GO:0019534 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.3 GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity(GO:0004582)
0.1 0.6 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 1.0 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.1 0.2 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.1 0.9 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.1 0.8 GO:0032041 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 0.5 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.1 0.7 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.1 1.0 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.1 0.1 GO:0016841 ammonia-lyase activity(GO:0016841)
0.1 0.4 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.1 0.8 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.1 0.4 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.1 0.4 GO:0032977 membrane insertase activity(GO:0032977)
0.1 0.4 GO:0102360 flavonol 3-O-glucosyltransferase activity(GO:0047893) daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.1 0.3 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 0.7 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.1 0.9 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.1 0.2 GO:0016034 maleylacetoacetate isomerase activity(GO:0016034)
0.1 0.2 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.1 0.7 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.1 0.8 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 0.6 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.1 0.5 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 0.7 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.1 0.3 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.1 0.2 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.1 1.1 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.3 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.1 0.2 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 0.9 GO:0003746 translation elongation factor activity(GO:0003746)
0.1 0.6 GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water(GO:0016717)
0.1 0.3 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.1 0.8 GO:0070717 poly-purine tract binding(GO:0070717)
0.1 0.2 GO:0051010 microtubule plus-end binding(GO:0051010)
0.1 0.3 GO:0047780 citrate dehydratase activity(GO:0047780)
0.1 0.3 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.1 0.3 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.1 2.6 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.1 0.2 GO:0004046 aminoacylase activity(GO:0004046)
0.0 0.2 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.0 0.3 GO:0003985 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.0 0.2 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 1.0 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.1 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.0 0.5 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.3 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.3 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.7 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.5 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.3 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.0 1.1 GO:0008810 cellulase activity(GO:0008810)
0.0 0.4 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.7 GO:0070628 proteasome binding(GO:0070628)
0.0 0.8 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 1.1 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.4 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.2 GO:0004324 ferredoxin-NADP+ reductase activity(GO:0004324)
0.0 0.3 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.3 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.1 GO:0035671 enone reductase activity(GO:0035671)
0.0 0.2 GO:0017091 AU-rich element binding(GO:0017091)
0.0 0.1 GO:0045181 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.0 0.2 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 0.2 GO:0070403 NAD+ binding(GO:0070403)
0.0 0.2 GO:0004049 anthranilate synthase activity(GO:0004049)
0.0 2.0 GO:0044389 ubiquitin-like protein ligase binding(GO:0044389)
0.0 0.3 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.7 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.2 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.0 0.2 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.0 0.6 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 1.5 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 0.1 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.0 0.1 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.0 0.5 GO:0008378 galactosyltransferase activity(GO:0008378)
0.0 0.1 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.0 1.7 GO:0005319 lipid transporter activity(GO:0005319)
0.0 0.2 GO:0001671 ATPase activator activity(GO:0001671)
0.0 0.2 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.0 0.4 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.2 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.0 0.2 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.2 GO:0016004 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.0 0.1 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.0 0.8 GO:0051087 chaperone binding(GO:0051087)
0.0 0.8 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.1 GO:0008417 fucosyltransferase activity(GO:0008417)
0.0 0.6 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.5 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 1.8 GO:0030599 pectinesterase activity(GO:0030599)
0.0 2.8 GO:0009055 electron carrier activity(GO:0009055)
0.0 1.4 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.1 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.0 0.1 GO:0022841 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.0 0.4 GO:0043424 protein histidine kinase binding(GO:0043424)
0.0 1.0 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 4.0 GO:0042803 protein homodimerization activity(GO:0042803)
0.0 0.2 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.4 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.6 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.5 GO:0004568 chitinase activity(GO:0004568)
0.0 0.3 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.1 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.2 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.3 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.1 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.7 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.1 GO:0016208 AMP binding(GO:0016208)
0.0 0.1 GO:0010334 sesquiterpene synthase activity(GO:0010334)
0.0 0.6 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.2 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 0.1 GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives(GO:0016857)
0.0 0.1 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.1 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.0 0.6 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.4 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 0.1 GO:0005496 steroid binding(GO:0005496)
0.0 0.1 GO:0097177 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.0 0.5 GO:0005347 ATP transmembrane transporter activity(GO:0005347)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.1 0.8 PID ATR PATHWAY ATR signaling pathway
0.1 0.2 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.2 PID PI3KCI PATHWAY Class I PI3K signaling events
0.0 0.2 PID AP1 PATHWAY AP-1 transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.5 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.2 0.9 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.2 0.5 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.1 0.7 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.1 0.8 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.1 0.2 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.3 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.0 0.2 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.0 0.2 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA