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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT4G25480

Z-value: 2.35

Transcription factors associated with AT4G25480

Gene Symbol Gene ID Gene Info
AT4G25480
AT4G25480 dehydration response element B1A

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
DREB1AarTal_v1_Chr4_-_13019400_130194000.401.6e-01Click!

Activity profile of AT4G25480 motif

Sorted Z-values of AT4G25480 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr2_-_17712290_17712330 10.95 AT2G42540.2
AT2G42540.4
AT2G42540.1
AT2G42540.3
COR15A
cold-regulated 15a
arTal_v1_Chr5_+_5209717_5209717 9.36 AT5G15960.1
KIN1
stress-responsive protein (KIN1) / stress-induced protein (KIN1)
arTal_v1_Chr2_-_17710433_17710433 8.51 AT2G42530.1
COR15B
cold regulated 15b
arTal_v1_Chr5_+_21240717_21240717 7.47 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
arTal_v1_Chr1_+_3019639_3019639 6.88 AT1G09350.1
GolS3
galactinol synthase 3
arTal_v1_Chr1_-_10289666_10289666 6.72 AT1G29395.1
COR413IM1
COLD REGULATED 314 INNER MEMBRANE 1
arTal_v1_Chr1_+_3020221_3020221 6.45 AT1G09350.2
GolS3
galactinol synthase 3
arTal_v1_Chr4_-_7401951_7401951 6.30 AT4G12470.1
AZI1
azelaic acid induced 1
arTal_v1_Chr5_+_5211719_5211719 5.77 AT5G15970.1
KIN2
stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)
arTal_v1_Chr5_-_22712441_22712441 5.61 AT5G56080.1
NAS2
nicotianamine synthase 2
arTal_v1_Chr4_+_14954204_14954204 5.59 AT4G30650.1
AT4G30650
Low temperature and salt responsive protein family
arTal_v1_Chr1_-_5765798_5765798 5.46 AT1G16850.1
AT1G16850
transmembrane protein
arTal_v1_Chr3_+_18940643_18940643 5.20 AT3G50970.1
LTI30
dehydrin family protein
arTal_v1_Chr4_+_15451988_15451988 5.01 AT4G31940.1
CYP82C4
cytochrome P450, family 82, subfamily C, polypeptide 4
arTal_v1_Chr4_-_15954803_15954803 4.61 AT4G33070.1
AT4G33070
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
arTal_v1_Chr4_+_10707344_10707378 4.60 AT4G19690.2
AT4G19690.1
IRT1
iron-regulated transporter 1
arTal_v1_Chr2_+_15106940_15106940 4.36 AT2G35960.1
NHL12
NDR1/HIN1-like 12
arTal_v1_Chr1_+_209208_209208 4.18 AT1G01580.1
FRO2
ferric reduction oxidase 2
arTal_v1_Chr1_+_208995_208995 4.17 AT1G01580.2
FRO2
ferric reduction oxidase 2
arTal_v1_Chr5_-_6725966_6725966 4.03 AT5G19890.1
AT5G19890
Peroxidase superfamily protein
arTal_v1_Chr1_-_17266724_17266824 3.94 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
arTal_v1_Chr5_-_7054281_7054281 3.84 AT5G20830.3
SUS1
sucrose synthase 1
arTal_v1_Chr2_-_19370478_19370478 3.84 AT2G47180.1
GolS1
galactinol synthase 1
arTal_v1_Chr4_+_9028262_9028262 3.80 AT4G15910.1
DI21
drought-induced 21
arTal_v1_Chr5_-_7054713_7054713 3.78 AT5G20830.1
SUS1
sucrose synthase 1
arTal_v1_Chr2_-_12415661_12415661 3.77 AT2G28900.1
OEP16-1
outer plastid envelope protein 16-1
arTal_v1_Chr3_-_8085669_8085669 3.71 AT3G22840.1
ELIP1
Chlorophyll A-B binding family protein
arTal_v1_Chr5_-_7055398_7055398 3.70 AT5G20830.2
SUS1
sucrose synthase 1
arTal_v1_Chr3_+_2441565_2441657 3.66 AT3G07650.4
AT3G07650.1
AT3G07650.3
AT3G07650.2
COL9
CONSTANS-like 9
arTal_v1_Chr1_-_3756998_3756998 3.51 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
arTal_v1_Chr2_-_12343443_12343443 3.49 AT2G28780.1
AT2G28780
P-hydroxybenzoic acid efflux pump subunit
arTal_v1_Chr1_+_6763765_6763915 3.47 AT1G19530.1
AT1G19530.2
AT1G19530
DNA polymerase epsilon catalytic subunit A
arTal_v1_Chr4_-_13001948_13001948 3.39 AT4G25433.1
AT4G25433
peptidoglycan-binding LysM domain-containing protein
arTal_v1_Chr5_-_1994824_1994961 3.29 AT5G06530.2
AT5G06530.3
AT5G06530.4
AT5G06530.1
ABCG22
ABC-2 type transporter family protein
arTal_v1_Chr2_-_18082776_18082776 3.28 AT2G43590.1
AT2G43590
Chitinase family protein
arTal_v1_Chr1_+_16263805_16263805 3.25 AT1G43160.1
RAP2.6
related to AP2 6
arTal_v1_Chr5_+_19481897_19481897 3.21 AT5G48070.1
XTH20
xyloglucan endotransglucosylase/hydrolase 20
arTal_v1_Chr3_-_1652149_1652149 3.13 AT3G05660.1
RLP33
receptor like protein 33
arTal_v1_Chr1_+_17766738_17766738 3.13 AT1G48100.1
AT1G48100
Pectin lyase-like superfamily protein
arTal_v1_Chr2_+_6950041_6950041 3.13 AT2G15970.2
COR413-PM1
cold regulated 413 plasma membrane 1
arTal_v1_Chr2_+_6949851_6949851 3.12 AT2G15970.1
COR413-PM1
cold regulated 413 plasma membrane 1
arTal_v1_Chr4_+_12827856_12827937 3.06 AT4G24960.1
AT4G24960.3
AT4G24960.2
HVA22D
HVA22 homologue D
arTal_v1_Chr5_-_5759817_5759817 2.96 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
arTal_v1_Chr5_+_17526660_17526729 2.90 AT5G43630.2
AT5G43630.1
AT5G43630.3
AT5G43630.4
TZP
zinc knuckle (CCHC-type) family protein
arTal_v1_Chr1_-_27755297_27755297 2.89 AT1G73810.1
AT1G73810
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
arTal_v1_Chr1_-_7086873_7086873 2.84 AT1G20440.1
COR47
cold-regulated 47
arTal_v1_Chr5_+_17937622_17937622 2.82 AT5G44530.3
AT5G44530.2
AT5G44530.1
AT5G44530
Subtilase family protein
arTal_v1_Chr3_-_19139423_19139423 2.81 AT3G51600.1
LTP5
lipid transfer protein 5
arTal_v1_Chr1_+_29354944_29354944 2.81 AT1G78070.1
AT1G78070
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_-_7089606_7089606 2.80 AT1G20450.1
AT1G20450.2
ERD10
Dehydrin family protein
arTal_v1_Chr1_+_25701770_25701770 2.80 AT1G68500.1
AT1G68500
hypothetical protein
arTal_v1_Chr1_-_8189220_8189234 2.80 AT1G23090.4
AT1G23090.1
AT1G23090.3
AT1G23090.2
AST91
sulfate transporter 91
arTal_v1_Chr4_+_16542242_16542242 2.75 AT4G34650.1
SQS2
squalene synthase 2
arTal_v1_Chr1_+_29356346_29356382 2.73 AT1G78070.2
AT1G78070.3
AT1G78070
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr5_+_17951442_17951449 2.71 AT5G44565.2
AT5G44565.1
AT5G44565.3
AT5G44565
transmembrane protein
arTal_v1_Chr1_-_12224000_12224108 2.71 AT1G33720.5
AT1G33720.1
AT1G33720.3
AT1G33720.2
AT1G33720.4
CYP76C6
cytochrome P450, family 76, subfamily C, polypeptide 6
arTal_v1_Chr3_+_5720941_5721030 2.68 AT3G16800.5
AT3G16800.4
AT3G16800.2
AT3G16800.6
AT3G16800.1
AT3G16800
Protein phosphatase 2C family protein
arTal_v1_Chr1_-_30142697_30142697 2.63 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_-_5173001_5173105 2.62 AT3G15354.4
AT3G15354.1
AT3G15354.2
AT3G15354.3
SPA3
SPA1-related 3
arTal_v1_Chr3_-_5845220_5845220 2.59 AT3G17130.1
AT3G17130
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr5_+_6718206_6718206 2.59 AT5G19875.1
AT5G19875
transmembrane protein
arTal_v1_Chr3_+_15983199_15983199 2.54 AT3G44300.1
NIT2
nitrilase 2
arTal_v1_Chr2_-_827994_827994 2.52 AT2G02850.1
ARPN
plantacyanin
arTal_v1_Chr1_+_27778984_27778984 2.48 AT1G73870.1
BBX16
B-box type zinc finger protein with CCT domain-containing protein
arTal_v1_Chr5_+_3536189_3536189 2.47 AT5G11110.1
SPS2F
sucrose phosphate synthase 2F
arTal_v1_Chr1_+_7785708_7785708 2.47 AT1G22065.1
AT1G22065
hypothetical protein
arTal_v1_Chr5_+_17973775_17973775 2.45 AT5G44575.1
AT5G44575
hypothetical protein
arTal_v1_Chr5_+_2563366_2563366 2.44 AT5G08000.1
AT5G08000.2
E13L3
glucan endo-1,3-beta-glucosidase-like protein 3
arTal_v1_Chr1_-_23246949_23246949 2.42 AT1G62770.1
AT1G62770
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr4_+_8839256_8839387 2.42 AT4G15450.1
AT4G15450.2
AT4G15450
Senescence/dehydration-associated protein-like protein
arTal_v1_Chr4_+_16543154_16543154 2.41 AT4G34650.2
SQS2
squalene synthase 2
arTal_v1_Chr2_-_18821889_18821889 2.39 AT2G45680.1
TCP9
TCP family transcription factor
arTal_v1_Chr5_-_17022723_17022723 2.37 AT5G42570.1
AT5G42570
B-cell receptor-associated 31-like protein
arTal_v1_Chr4_-_13752103_13752103 2.37 AT4G27520.1
ENODL2
early nodulin-like protein 2
arTal_v1_Chr2_-_9056481_9056481 2.36 AT2G21130.1
AT2G21130
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
arTal_v1_Chr5_+_8541713_8541751 2.35 AT5G24860.3
AT5G24860.1
FPF1
flowering promoting factor 1
arTal_v1_Chr5_-_20111806_20111806 2.33 AT5G49560.1
AT5G49560
Putative methyltransferase family protein
arTal_v1_Chr3_+_2176788_2176788 2.31 AT3G06890.1
AT3G06890
transmembrane protein
arTal_v1_Chr1_-_4845847_4845913 2.31 AT1G14170.2
AT1G14170.1
AT1G14170.3
AT1G14170
RNA-binding KH domain-containing protein
arTal_v1_Chr1_-_20578308_20578308 2.30 AT1G55152.1
AT1G55152
hypothetical protein
arTal_v1_Chr5_+_3157694_3157786 2.30 AT5G10100.1
AT5G10100.3
AT5G10100.4
TPPI
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr5_-_17755742_17755768 2.24 AT5G44110.2
AT5G44110.4
AT5G44110.3
AT5G44110.1
ABCI21
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr2_+_13814543_13814543 2.22 AT2G32540.1
CSLB04
cellulose synthase-like B4
arTal_v1_Chr2_-_19287590_19287590 2.21 AT2G46940.1
AT2G46940
fold protein
arTal_v1_Chr2_+_17057388_17057388 2.21 AT2G40880.1
CYSA
cystatin A
arTal_v1_Chr5_+_17171807_17171807 2.21 AT5G42825.1
AT5G42825
hypothetical protein
arTal_v1_Chr5_+_6673874_6673874 2.19 AT5G19740.1
AT5G19740
Peptidase M28 family protein
arTal_v1_Chr4_-_5964054_5964054 2.18 AT4G09420.1
AT4G09420
Disease resistance protein (TIR-NBS class)
arTal_v1_Chr3_+_23211287_23211287 2.18 AT3G62740.2
AT3G62740.1
BGLU7
beta glucosidase 7
arTal_v1_Chr1_+_24551807_24551807 2.17 AT1G65960.3
AT1G65960.1
GAD2
glutamate decarboxylase 2
arTal_v1_Chr4_-_13864659_13864659 2.17 AT4G27830.1
BGLU10
beta glucosidase 10
arTal_v1_Chr3_+_4403355_4403355 2.16 AT3G13510.1
AT3G13510
carboxyl-terminal peptidase, putative (DUF239)
arTal_v1_Chr4_-_13864327_13864327 2.16 AT4G27830.2
BGLU10
beta glucosidase 10
arTal_v1_Chr5_+_22515391_22515440 2.13 AT5G55580.1
AT5G55580.3
AT5G55580.2
AT5G55580
Mitochondrial transcription termination factor family protein
arTal_v1_Chr2_-_16603059_16603061 2.13 AT2G39800.2
AT2G39800.4
AT2G39800.3
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
arTal_v1_Chr2_+_9841842_9841842 2.12 AT2G23120.1
AT2G23120
Late embryogenesis abundant protein, group 6
arTal_v1_Chr1_-_4679594_4679594 2.12 AT1G13640.2
AT1G13640
Phosphatidylinositol 3- and 4-kinase family protein
arTal_v1_Chr1_-_9451768_9451768 2.11 AT1G27200.1
AT1G27200
glycosyltransferase family protein (DUF23)
arTal_v1_Chr3_-_2699257_2699257 2.10 AT3G08860.2
PYD4
PYRIMIDINE 4
arTal_v1_Chr5_-_25866972_25867025 2.10 AT5G64700.2
AT5G64700.1
UMAMIT21
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr1_+_24554413_24554413 2.08 AT1G65960.4
GAD2
glutamate decarboxylase 2
arTal_v1_Chr5_-_23737335_23737335 2.08 AT5G58780.1
cPT5
Undecaprenyl pyrophosphate synthetase family protein
arTal_v1_Chr3_+_5721225_5721225 2.08 AT3G16800.3
AT3G16800
Protein phosphatase 2C family protein
arTal_v1_Chr4_-_433938_434029 2.07 AT4G01000.2
AT4G01000.1
AT4G01000
Ubiquitin-like superfamily protein
arTal_v1_Chr1_-_4679862_4679862 2.07 AT1G13640.1
AT1G13640
Phosphatidylinositol 3- and 4-kinase family protein
arTal_v1_Chr1_-_29869784_29869784 2.06 AT1G79410.1
OCT5
organic cation/carnitine transporter5
arTal_v1_Chr2_-_5675995_5675995 2.06 AT2G13610.1
ABCG5
ABC-2 type transporter family protein
arTal_v1_Chr4_-_7195214_7195216 2.05 AT4G12000.3
AT4G12000.2
AT4G12000.1
AT4G12000
SNARE associated Golgi protein family
arTal_v1_Chr3_-_3961911_3961920 2.04 AT3G12490.1
AT3G12490.2
CYSB
cystatin B
arTal_v1_Chr3_-_2699420_2699420 2.04 AT3G08860.1
PYD4
PYRIMIDINE 4
arTal_v1_Chr3_-_20048190_20048190 2.04 AT3G54140.2
PTR1
peptide transporter 1
arTal_v1_Chr1_+_18416474_18416475 1.99 AT1G49760.2
AT1G49760.1
PAB8
poly(A) binding protein 8
arTal_v1_Chr1_+_24552003_24552003 1.98 AT1G65960.2
GAD2
glutamate decarboxylase 2
arTal_v1_Chr3_-_20048745_20048745 1.97 AT3G54140.1
PTR1
peptide transporter 1
arTal_v1_Chr5_+_16161449_16161449 1.97 AT5G40390.1
SIP1
Raffinose synthase family protein
arTal_v1_Chr1_+_23168767_23168767 1.97 AT1G62570.1
FMO GS-OX4
flavin-monooxygenase glucosinolate S-oxygenase 4
arTal_v1_Chr4_+_18413775_18413775 1.95 AT4G39675.1
AT4G39675
hypothetical protein
arTal_v1_Chr1_-_11595982_11596056 1.93 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_+_5092140_5092140 1.93 AT5G15650.1
RGP2
reversibly glycosylated polypeptide 2
arTal_v1_Chr1_+_26038905_26038905 1.92 AT1G69260.1
AFP1
ABI five binding protein
arTal_v1_Chr2_+_13580371_13580371 1.91 AT2G31940.1
AT2G31940
oxidoreductase/transition metal ion-binding protein
arTal_v1_Chr5_-_7385833_7385833 1.90 AT5G22310.1
AT5G22310
trichohyalin-like protein
arTal_v1_Chr1_+_16646696_16646817 1.89 AT1G43890.1
AT1G43890.2
AT1G43890.3
RAB18
RAB GTPASE HOMOLOG B18
arTal_v1_Chr2_+_8183638_8183638 1.89 AT2G18890.1
AT2G18890.3
AT2G18890
Protein kinase superfamily protein
arTal_v1_Chr4_-_14117367_14117367 1.88 AT4G28560.1
RIC7
ROP-interactive CRIB motif-containing protein 7
arTal_v1_Chr1_-_7550741_7550741 1.88 AT1G21540.1
AT1G21540
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr5_+_9033204_9033204 1.87 AT5G25890.1
IAA28
indole-3-acetic acid inducible 28
arTal_v1_Chr1_+_846664_846664 1.87 AT1G03420.1
Sadhu4-2

arTal_v1_Chr5_-_17861150_17861150 1.86 AT5G44340.1
TUB4
tubulin beta chain 4
arTal_v1_Chr4_+_5244865_5244865 1.85 AT4G08300.1
UMAMIT17
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr2_-_7757875_7757929 1.85 AT2G17840.2
AT2G17840.1
ERD7
Senescence/dehydration-associated protein-like protein
arTal_v1_Chr4_+_9257869_9257869 1.83 AT4G16390.1
SVR7
pentatricopeptide (PPR) repeat-containing protein
arTal_v1_Chr1_-_21580766_21580766 1.83 AT1G58235.1
AT1G58235
hypothetical protein
arTal_v1_Chr1_+_27628678_27628678 1.83 AT1G73480.1
AT1G73480
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_-_3518035_3518035 1.83 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
arTal_v1_Chr4_-_810574_810611 1.83 AT4G01870.1
AT4G01870.2
AT4G01870
tolB protein-like protein
arTal_v1_Chr4_+_10521259_10521379 1.82 AT4G19230.1
AT4G19230.2
CYP707A1
cytochrome P450, family 707, subfamily A, polypeptide 1
arTal_v1_Chr4_-_18370698_18370698 1.82 AT4G39510.1
CYP96A12
cytochrome P450, family 96, subfamily A, polypeptide 12
arTal_v1_Chr1_+_24109538_24109538 1.81 AT1G64890.1
AT1G64890
Major facilitator superfamily protein
arTal_v1_Chr1_+_18701882_18701882 1.81 AT1G50480.1
THFS
10-formyltetrahydrofolate synthetase
arTal_v1_Chr1_-_21581165_21581165 1.81 AT1G58235.2
AT1G58235
hypothetical protein
arTal_v1_Chr2_+_100484_100634 1.80 AT2G01150.2
AT2G01150.3
AT2G01150.1
RHA2B
RING-H2 finger protein 2B
arTal_v1_Chr3_+_5330194_5330194 1.79 AT3G15730.1
PLDALPHA1
phospholipase D alpha 1
arTal_v1_Chr2_-_16603319_16603319 1.79 AT2G39800.1
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
arTal_v1_Chr5_-_15770456_15770456 1.78 AT5G39410.1
AT5G39410
Saccharopine dehydrogenase
arTal_v1_Chr2_+_12805667_12805714 1.78 AT2G30010.2
AT2G30010.1
TBL45
TRICHOME BIREFRINGENCE-LIKE 45
arTal_v1_Chr3_+_4544364_4544384 1.78 AT3G13810.5
AT3G13810.3
AT3G13810.4
AT3G13810.6
AT3G13810.2
AT3G13810.1
IDD11
indeterminate(ID)-domain 11
arTal_v1_Chr1_-_4243201_4243229 1.77 AT1G12440.1
AT1G12440.3
AT1G12440
A20/AN1-like zinc finger family protein
arTal_v1_Chr4_+_15373988_15373999 1.77 AT4G31780.1
AT4G31780.3
AT4G31780.2
MGD1
monogalactosyl diacylglycerol synthase 1
arTal_v1_Chr2_-_15955752_15955752 1.77 AT2G38110.1
GPAT6
glycerol-3-phosphate acyltransferase 6
arTal_v1_Chr2_-_18095093_18095093 1.77 AT2G43620.1
AT2G43620
Chitinase family protein
arTal_v1_Chr1_-_4242963_4242963 1.76 AT1G12440.2
AT1G12440
A20/AN1-like zinc finger family protein
arTal_v1_Chr2_-_18956582_18956582 1.76 AT2G46110.1
KPHMT1
ketopantoate hydroxymethyltransferase 1
arTal_v1_Chr1_-_2711000_2711000 1.75 AT1G08560.1
SYP111
syntaxin of plants 111
arTal_v1_Chr3_+_1795145_1795145 1.75 AT3G05980.1
AT3G05980
hypothetical protein
arTal_v1_Chr1_+_25746697_25746697 1.74 AT1G68570.1
AT1G68570
Major facilitator superfamily protein
arTal_v1_Chr3_-_7808046_7808046 1.73 AT3G22142.1
AT3G22142
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_-_4697078_4697078 1.72 AT5G14570.1
NRT2.7
high affinity nitrate transporter 2.7
arTal_v1_Chr1_-_22382422_22382422 1.72 AT1G60790.1
TBL2
trichome birefringence-like protein (DUF828)
arTal_v1_Chr5_-_1742161_1742186 1.71 AT5G05790.2
AT5G05790.1
AT5G05790
Duplicated homeodomain-like superfamily protein
arTal_v1_Chr1_+_20386809_20386809 1.71 AT1G54575.2
AT1G54575
hypothetical protein
arTal_v1_Chr1_-_28009450_28009451 1.71 AT1G74520.2
AT1G74520.1
HVA22A
HVA22 homologue A
arTal_v1_Chr1_+_9996713_9996713 1.70 AT1G28440.1
HSL1
HAESA-like 1
arTal_v1_Chr4_+_11773221_11773221 1.70 AT4G22270.2
AT4G22270.1
MRB1
transmembrane protein, putative (DUF3537)
arTal_v1_Chr1_+_20387058_20387058 1.69 AT1G54575.1
AT1G54575
hypothetical protein
arTal_v1_Chr4_+_6745100_6745119 1.69 AT4G11040.2
AT4G11040.1
AT4G11040
Protein phosphatase 2C family protein
arTal_v1_Chr1_+_2848149_2848149 1.69 AT1G08890.1
AT1G08890
Major facilitator superfamily protein
arTal_v1_Chr3_+_1727151_1727151 1.68 AT3G05800.1
AIF1
AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1
arTal_v1_Chr1_+_17558137_17558137 1.68 AT1G47710.1
SERPIN1
Serine protease inhibitor (SERPIN) family protein
arTal_v1_Chr1_-_638681_638681 1.68 AT1G02870.1
AT1G02870
nucleolar-like protein
arTal_v1_Chr1_+_25746994_25746994 1.67 AT1G68570.2
AT1G68570
Major facilitator superfamily protein
arTal_v1_Chr2_+_15005064_15005064 1.67 AT2G35700.1
ERF38
ERF family protein 38
arTal_v1_Chr4_-_16285229_16285229 1.67 AT4G33980.1
AT4G33980
hypothetical protein
arTal_v1_Chr3_+_16138375_16138375 1.66 AT3G44550.2
FAR5
fatty acid reductase 5
arTal_v1_Chr4_-_16799553_16799823 1.66 AT4G35300.11
AT4G35300.1
AT4G35300.2
AT4G35300.9
AT4G35300.3
AT4G35300.8
AT4G35300.6
AT4G35300.5
AT4G35300.4
AT4G35300.7
AT4G35300.10
TMT2
tonoplast monosaccharide transporter2
arTal_v1_Chr3_-_5171674_5171674 1.65 AT3G15354.5
SPA3
SPA1-related 3
arTal_v1_Chr4_+_2804403_2804451 1.65 AT4G05520.1
AT4G05520.2
EHD2
EPS15 homology domain 2
arTal_v1_Chr1_-_23786800_23786800 1.64 AT1G64080.1
MAKR2
membrane-associated kinase regulator
arTal_v1_Chr1_+_23515680_23515680 1.64 AT1G63420.1
AT1G63420.2
AT1G63420
O-glucosyltransferase-like protein (DUF821)
arTal_v1_Chr1_-_5645443_5645443 1.64 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_+_9668508_9668601 1.64 AT1G27760.3
AT1G27760.1
AT1G27760.2
SAT32
interferon-related developmental regulator family protein / IFRD protein family
arTal_v1_Chr5_+_18444607_18444607 1.64 AT5G45510.2
AT5G45510.1
AT5G45510
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr5_-_16634012_16634012 1.63 AT5G41590.1
AT5G41590
LURP-one-like protein (DUF567)
arTal_v1_Chr1_-_3419691_3419691 1.63 AT1G10410.1
AT1G10410
CW14 protein (DUF1336)
arTal_v1_Chr3_-_6212551_6212551 1.62 AT3G18130.1
RACK1C_AT
receptor for activated C kinase 1C
arTal_v1_Chr4_-_16285059_16285059 1.62 AT4G33980.2
AT4G33980
hypothetical protein
arTal_v1_Chr5_-_5759449_5759449 1.62 AT5G17460.4
AT5G17460.5
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
arTal_v1_Chr3_+_5539631_5539631 1.62 AT3G16340.2
ABCG29
pleiotropic drug resistance 1
arTal_v1_Chr1_-_19250823_19250863 1.60 AT1G51840.1
AT1G51840.3
AT1G51840.4
AT1G51840.5
AT1G51840.2
AT1G51840
kinase-like protein
arTal_v1_Chr3_+_5539385_5539385 1.60 AT3G16340.1
ABCG29
pleiotropic drug resistance 1
arTal_v1_Chr2_+_7513128_7513130 1.60 AT2G17280.2
AT2G17280.1
AT2G17280
Phosphoglycerate mutase family protein
arTal_v1_Chr4_+_10030529_10030697 1.59 AT4G18070.2
AT4G18070.1
AT4G18070.4
AT4G18070.3
AT4G18070
suppressor
arTal_v1_Chr5_+_4206738_4206784 1.59 AT5G13200.2
AT5G13200.1
AT5G13200
GRAM domain family protein
arTal_v1_Chr3_-_3513379_3513379 1.58 AT3G11210.1
AT3G11210
SGNH hydrolase-type esterase superfamily protein
arTal_v1_Chr1_-_17706460_17706460 1.58 AT1G48000.1
MYB112
myb domain protein 112
arTal_v1_Chr3_+_20747629_20747629 1.57 AT3G55940.1
AT3G55940
Phosphoinositide-specific phospholipase C family protein
arTal_v1_Chr3_-_19991106_19991186 1.57 AT3G53990.2
AT3G53990.1
AT3G53990
Adenine nucleotide alpha hydrolases-like superfamily protein
arTal_v1_Chr5_-_3728726_3728726 1.57 AT5G11590.1
TINY2
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr4_+_15141068_15141068 1.57 AT4G31140.1
AT4G31140
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr4_+_10030921_10030922 1.57 AT4G18070.6
AT4G18070.5
AT4G18070.7
AT4G18070
suppressor

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G25480

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
5.0 5.0 GO:0071281 cellular response to iron ion(GO:0071281)
2.3 11.3 GO:0072708 response to sorbitol(GO:0072708)
1.7 6.8 GO:0030417 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
1.5 13.6 GO:0009819 drought recovery(GO:0009819)
1.1 4.6 GO:0015675 nickel cation transport(GO:0015675)
0.9 3.8 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.9 2.7 GO:0010203 response to very low fluence red light stimulus(GO:0010203)
0.8 3.2 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.8 49.7 GO:0009631 cold acclimation(GO:0009631)
0.8 3.0 GO:0071836 nectar secretion(GO:0071836)
0.7 2.9 GO:0010507 negative regulation of autophagy(GO:0010507)
0.7 7.4 GO:0009608 response to symbiont(GO:0009608)
0.7 2.0 GO:0019406 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.7 3.9 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.6 1.3 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.6 4.4 GO:0010148 transpiration(GO:0010148)
0.6 3.7 GO:0070141 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.6 17.4 GO:0006012 galactose metabolic process(GO:0006012)
0.6 1.7 GO:0032196 transposition(GO:0032196)
0.5 1.6 GO:0010617 circadian regulation of calcium ion oscillation(GO:0010617) response to strigolactone(GO:1902347)
0.5 1.5 GO:0010792 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.5 1.5 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.5 2.9 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.5 1.4 GO:0061014 positive regulation of mRNA catabolic process(GO:0061014)
0.5 1.4 GO:1900032 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.4 1.3 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.4 1.7 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.4 1.3 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.4 1.2 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.4 1.6 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.4 5.6 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.4 1.5 GO:2000736 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.4 0.7 GO:0046865 isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865)
0.4 1.8 GO:1903792 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.4 1.1 GO:0042891 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.4 0.7 GO:0080187 floral organ senescence(GO:0080187)
0.4 1.1 GO:0019368 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.4 1.8 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.3 1.4 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.3 3.5 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.3 1.0 GO:1902446 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.3 1.0 GO:0015755 hexose transport(GO:0008645) fructose transport(GO:0015755)
0.3 5.4 GO:0006538 glutamate catabolic process(GO:0006538)
0.3 1.0 GO:0045694 regulation of embryo sac egg cell differentiation(GO:0045694)
0.3 2.0 GO:0043480 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.3 1.0 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.3 1.0 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.3 1.0 GO:0048629 trichome patterning(GO:0048629)
0.3 1.6 GO:0042550 photosystem I stabilization(GO:0042550)
0.3 1.0 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.3 5.4 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.3 0.6 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.3 2.4 GO:0009061 anaerobic respiration(GO:0009061)
0.3 5.7 GO:0045338 farnesyl diphosphate metabolic process(GO:0045338)
0.3 0.9 GO:0030970 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.3 1.1 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.3 2.5 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.3 2.5 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.3 2.4 GO:0071249 cellular response to nitrate(GO:0071249)
0.3 0.8 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.3 0.8 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.3 1.8 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.3 0.5 GO:0051512 positive regulation of unidimensional cell growth(GO:0051512)
0.3 9.8 GO:0055072 iron ion homeostasis(GO:0055072)
0.2 2.2 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.2 0.7 GO:0006971 hypotonic response(GO:0006971) hypotonic salinity response(GO:0042539)
0.2 1.5 GO:0006624 vacuolar protein processing(GO:0006624)
0.2 1.0 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.2 1.0 GO:0051189 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.2 0.7 GO:0019483 thymine catabolic process(GO:0006210) uracil catabolic process(GO:0006212) beta-alanine metabolic process(GO:0019482) beta-alanine biosynthetic process(GO:0019483) thymine metabolic process(GO:0019859)
0.2 0.7 GO:0031506 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506) response to cobalt ion(GO:0032025)
0.2 1.4 GO:1900458 negative regulation of brassinosteroid mediated signaling pathway(GO:1900458)
0.2 1.2 GO:0006884 cell volume homeostasis(GO:0006884)
0.2 4.9 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.2 1.9 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.2 0.7 GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.2 1.1 GO:1901562 response to paraquat(GO:1901562)
0.2 3.2 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.2 2.7 GO:0060260 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.2 1.1 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.2 0.7 GO:0030100 regulation of endocytosis(GO:0030100)
0.2 2.2 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.2 5.6 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.2 1.5 GO:0031539 positive regulation of anthocyanin metabolic process(GO:0031539)
0.2 2.4 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.2 0.4 GO:0002009 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.2 0.9 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.2 3.2 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.2 3.6 GO:0010540 basipetal auxin transport(GO:0010540)
0.2 1.0 GO:1901535 regulation of DNA demethylation(GO:1901535)
0.2 0.8 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.2 0.8 GO:1903173 phytol metabolic process(GO:0033306) fatty alcohol metabolic process(GO:1903173)
0.2 1.6 GO:0033523 histone H2B ubiquitination(GO:0033523)
0.2 1.2 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.2 1.0 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.2 1.6 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.2 2.8 GO:0009641 shade avoidance(GO:0009641)
0.2 2.7 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.2 1.7 GO:0071450 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.2 1.0 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.2 0.6 GO:0009945 radial axis specification(GO:0009945)
0.2 0.7 GO:0071312 cellular response to alkaloid(GO:0071312) cellular response to caffeine(GO:0071313) cellular response to purine-containing compound(GO:0071415) negative regulation of cellular response to caffeine(GO:1901181)
0.2 0.9 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.2 0.9 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.2 1.1 GO:1903428 positive regulation of reactive oxygen species biosynthetic process(GO:1903428)
0.2 1.7 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.2 0.4 GO:0051099 positive regulation of binding(GO:0051099)
0.2 0.9 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.2 2.4 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.2 1.8 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.2 3.1 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.2 0.5 GO:0071042 U1 snRNA 3'-end processing(GO:0034473) U5 snRNA 3'-end processing(GO:0034476) nuclear polyadenylation-dependent mRNA catabolic process(GO:0071042) polyadenylation-dependent mRNA catabolic process(GO:0071047)
0.2 0.5 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.2 6.4 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.2 0.7 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.2 11.2 GO:0006972 hyperosmotic response(GO:0006972)
0.2 0.5 GO:0090224 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.2 1.4 GO:0009438 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.2 0.5 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.2 1.2 GO:0034427 nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'(GO:0034427) U4 snRNA 3'-end processing(GO:0034475) polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.2 1.0 GO:0010508 positive regulation of autophagy(GO:0010508)
0.2 0.7 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.2 2.2 GO:1902074 response to salt(GO:1902074)
0.2 1.2 GO:2000601 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.2 0.5 GO:1990532 stress response to nickel ion(GO:1990532)
0.2 2.2 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.2 0.3 GO:0048359 mucilage metabolic process involved in seed coat development(GO:0048359)
0.2 0.5 GO:0051202 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.2 0.7 GO:0019474 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.2 0.5 GO:0010434 nectary development(GO:0010254) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.2 0.8 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.2 0.5 GO:1903008 organelle disassembly(GO:1903008)
0.2 2.2 GO:0071329 cellular response to sucrose stimulus(GO:0071329)
0.2 1.0 GO:0009726 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.2 0.6 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.2 1.4 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.2 1.7 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.2 0.3 GO:0002119 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.2 1.8 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 0.4 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.1 3.2 GO:0015850 organic hydroxy compound transport(GO:0015850)
0.1 0.7 GO:0031125 rRNA 3'-end processing(GO:0031125)
0.1 0.8 GO:0015919 peroxisomal membrane transport(GO:0015919)
0.1 2.2 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 0.4 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.1 1.3 GO:0010358 leaf shaping(GO:0010358)
0.1 1.4 GO:0045116 protein neddylation(GO:0045116)
0.1 0.4 GO:0080051 cutin transport(GO:0080051)
0.1 1.7 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.1 1.7 GO:0010030 positive regulation of seed germination(GO:0010030)
0.1 0.8 GO:0010067 procambium histogenesis(GO:0010067)
0.1 1.3 GO:0070813 hydrogen sulfide metabolic process(GO:0070813)
0.1 2.2 GO:0051553 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.1 3.0 GO:0031647 regulation of protein stability(GO:0031647)
0.1 1.3 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 0.4 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.1 0.4 GO:0006434 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.1 2.2 GO:0009593 detection of chemical stimulus(GO:0009593)
0.1 0.4 GO:0033240 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.1 2.9 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 0.2 GO:0051291 protein heterooligomerization(GO:0051291)
0.1 0.7 GO:0070370 cellular heat acclimation(GO:0070370)
0.1 0.7 GO:0015846 polyamine transport(GO:0015846)
0.1 1.1 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.1 0.8 GO:0010315 auxin efflux(GO:0010315)
0.1 1.2 GO:0006206 pyrimidine nucleobase metabolic process(GO:0006206) pyrimidine nucleobase biosynthetic process(GO:0019856)
0.1 0.7 GO:0097502 mannosylation(GO:0097502)
0.1 0.5 GO:0010070 zygote asymmetric cell division(GO:0010070)
0.1 0.5 GO:0051031 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.1 0.6 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.1 0.6 GO:0080121 AMP transport(GO:0080121)
0.1 2.1 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.1 0.4 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 1.9 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 1.8 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.1 1.4 GO:0048766 root hair initiation(GO:0048766)
0.1 0.7 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 0.3 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.1 0.5 GO:0010359 regulation of anion channel activity(GO:0010359)
0.1 1.0 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.1 0.4 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.1 1.4 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 1.9 GO:0000373 Group II intron splicing(GO:0000373)
0.1 0.9 GO:0090151 protein import into mitochondrial inner membrane(GO:0045039) establishment of protein localization to mitochondrial membrane(GO:0090151)
0.1 0.4 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.1 0.2 GO:0015868 ADP transport(GO:0015866) ATP transport(GO:0015867) purine ribonucleotide transport(GO:0015868)
0.1 0.6 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.1 0.3 GO:0030974 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.1 0.3 GO:0042353 fucose biosynthetic process(GO:0042353)
0.1 0.3 GO:0017014 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.1 0.9 GO:0006826 iron ion transport(GO:0006826)
0.1 1.2 GO:0000103 sulfate assimilation(GO:0000103)
0.1 0.5 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 1.0 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.1 1.1 GO:0009638 phototropism(GO:0009638)
0.1 0.9 GO:0072506 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.1 0.3 GO:0071569 protein ufmylation(GO:0071569)
0.1 2.2 GO:0071472 cellular response to salt stress(GO:0071472)
0.1 0.3 GO:0070542 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.1 0.9 GO:0060321 acceptance of pollen(GO:0060321)
0.1 0.5 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.1 2.3 GO:2000031 regulation of salicylic acid mediated signaling pathway(GO:2000031)
0.1 1.1 GO:0006621 protein retention in ER lumen(GO:0006621)
0.1 0.4 GO:0019323 pentose catabolic process(GO:0019323)
0.1 0.5 GO:1902969 mitotic DNA replication(GO:1902969)
0.1 2.6 GO:0009247 glycolipid biosynthetic process(GO:0009247)
0.1 0.3 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.1 3.5 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.1 0.7 GO:0097437 maintenance of seed dormancy(GO:0010231) maintenance of dormancy(GO:0097437)
0.1 1.3 GO:0097031 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.1 1.4 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.1 1.6 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 0.3 GO:0016098 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.1 0.6 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.5 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 0.6 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.1 1.1 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 0.3 GO:0048530 fruit morphogenesis(GO:0048530)
0.1 1.1 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.1 1.4 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.1 2.4 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.1 0.2 GO:0010325 raffinose family oligosaccharide biosynthetic process(GO:0010325)
0.1 0.2 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.1 1.3 GO:0010252 auxin homeostasis(GO:0010252)
0.1 0.6 GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.1 0.6 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.1 0.7 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 1.8 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 1.1 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.1 0.2 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.1 0.3 GO:0048830 adventitious root development(GO:0048830)
0.1 0.4 GO:0048564 photosystem I assembly(GO:0048564)
0.1 1.8 GO:0010143 cutin biosynthetic process(GO:0010143)
0.1 0.5 GO:0030308 negative regulation of cell growth(GO:0030308)
0.1 0.7 GO:0006265 DNA topological change(GO:0006265)
0.1 0.5 GO:0034311 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.1 0.3 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.4 GO:0034502 protein localization to chromosome(GO:0034502)
0.1 0.3 GO:0071108 protein K63-linked deubiquitination(GO:0070536) protein K48-linked deubiquitination(GO:0071108)
0.1 0.2 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 0.3 GO:0006513 protein monoubiquitination(GO:0006513)
0.1 2.7 GO:0016036 cellular response to phosphate starvation(GO:0016036)
0.1 1.0 GO:0010091 trichome branching(GO:0010091)
0.1 0.3 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.1 2.6 GO:0048278 membrane docking(GO:0022406) vesicle docking(GO:0048278)
0.1 0.2 GO:0014074 response to purine-containing compound(GO:0014074)
0.1 0.3 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.1 1.2 GO:0035265 organ growth(GO:0035265)
0.1 0.3 GO:0043489 RNA stabilization(GO:0043489)
0.1 0.7 GO:0045493 xylan catabolic process(GO:0045493)
0.1 1.3 GO:0042026 protein refolding(GO:0042026)
0.0 1.9 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 0.4 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.1 GO:0051098 regulation of binding(GO:0051098)
0.0 0.9 GO:0031167 rRNA methylation(GO:0031167)
0.0 3.7 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 0.4 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.2 GO:0043247 regulation of telomere maintenance(GO:0032204) telomere maintenance in response to DNA damage(GO:0043247)
0.0 0.3 GO:0043155 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.0 0.3 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.0 0.4 GO:0045995 regulation of embryonic development(GO:0045995)
0.0 0.7 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.4 GO:0007130 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.0 1.4 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.0 2.8 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 2.6 GO:1903311 regulation of mRNA processing(GO:0050684) regulation of mRNA metabolic process(GO:1903311)
0.0 0.8 GO:0006108 malate metabolic process(GO:0006108)
0.0 1.4 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.8 GO:2000028 regulation of photoperiodism, flowering(GO:2000028)
0.0 0.4 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.0 2.3 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 1.4 GO:0006914 autophagy(GO:0006914)
0.0 0.6 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.4 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.3 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.6 GO:0048829 root cap development(GO:0048829)
0.0 0.8 GO:0032786 positive regulation of DNA-templated transcription, elongation(GO:0032786)
0.0 0.8 GO:0080155 regulation of fertilization(GO:0080154) regulation of double fertilization forming a zygote and endosperm(GO:0080155)
0.0 0.3 GO:0010047 fruit dehiscence(GO:0010047)
0.0 0.3 GO:0071333 cellular response to glucose stimulus(GO:0071333)
0.0 1.1 GO:0051225 spindle assembly(GO:0051225)
0.0 0.2 GO:0016584 nucleosome positioning(GO:0016584)
0.0 0.3 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.0 0.9 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.2 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.0 0.0 GO:0048575 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.0 0.4 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.1 GO:0046203 spermidine catabolic process(GO:0046203)
0.0 0.4 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.0 0.1 GO:0007142 male meiosis II(GO:0007142)
0.0 0.3 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 0.3 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 4.7 GO:0046777 protein autophosphorylation(GO:0046777)
0.0 0.3 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0 0.4 GO:0010229 inflorescence development(GO:0010229)
0.0 0.9 GO:0010043 response to zinc ion(GO:0010043)
0.0 0.2 GO:0050777 negative regulation of immune response(GO:0050777)
0.0 1.8 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.0 0.9 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.1 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.0 0.7 GO:0034250 positive regulation of cellular amide metabolic process(GO:0034250) positive regulation of translation(GO:0045727)
0.0 0.6 GO:0009226 nucleotide-sugar biosynthetic process(GO:0009226)
0.0 0.3 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.1 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 1.7 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.3 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 4.2 GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process(GO:0043161)
0.0 2.0 GO:0009909 regulation of flower development(GO:0009909)
0.0 0.8 GO:0090305 nucleic acid phosphodiester bond hydrolysis(GO:0090305)
0.0 0.1 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.0 0.2 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.1 GO:0051181 cofactor transport(GO:0051181)
0.0 0.4 GO:0007030 Golgi organization(GO:0007030)
0.0 1.1 GO:0016072 rRNA processing(GO:0006364) rRNA metabolic process(GO:0016072)
0.0 0.1 GO:0000919 cell plate assembly(GO:0000919)
0.0 0.2 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 0.6 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.0 0.0 GO:0009895 negative regulation of catabolic process(GO:0009895)
0.0 0.3 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 1.9 GO:0043413 protein glycosylation(GO:0006486) macromolecule glycosylation(GO:0043413)
0.0 0.3 GO:0006744 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.0 0.1 GO:0006526 arginine biosynthetic process(GO:0006526)
0.0 0.0 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.0 0.3 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.3 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.0 GO:0042391 regulation of membrane potential(GO:0042391)
0.0 0.7 GO:0006897 endocytosis(GO:0006897)
0.0 0.1 GO:0019632 shikimate metabolic process(GO:0019632)
0.0 0.2 GO:0010109 regulation of photosynthesis(GO:0010109)
0.0 5.4 GO:0009790 embryo development(GO:0009790)
0.0 0.2 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.9 GO:0007623 circadian rhythm(GO:0007623) rhythmic process(GO:0048511)
0.0 0.1 GO:0009957 epidermal cell fate specification(GO:0009957)
0.0 0.4 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.2 GO:0046467 membrane lipid biosynthetic process(GO:0046467)
0.0 0.3 GO:0006887 exocytosis(GO:0006887)
0.0 0.2 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.1 GO:0015739 sialic acid transport(GO:0015739)
0.0 0.3 GO:0006289 nucleotide-excision repair(GO:0006289)
0.0 0.0 GO:0030031 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.0 0.5 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.4 GO:0016485 protein processing(GO:0016485)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.9 7.8 GO:0031352 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.5 0.5 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.5 0.9 GO:0034457 Mpp10 complex(GO:0034457)
0.4 1.3 GO:1990112 RQC complex(GO:1990112)
0.4 3.3 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.3 2.0 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.3 2.2 GO:0016363 nuclear matrix(GO:0016363)
0.3 1.2 GO:0034715 pICln-Sm protein complex(GO:0034715)
0.3 1.3 GO:0072588 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.2 0.7 GO:0005775 vacuolar lumen(GO:0005775)
0.2 1.1 GO:0005719 nuclear euchromatin(GO:0005719)
0.2 12.1 GO:0009707 chloroplast outer membrane(GO:0009707)
0.2 0.8 GO:0010330 cellulose synthase complex(GO:0010330)
0.2 0.8 GO:0009509 chromoplast(GO:0009509)
0.2 0.9 GO:0005782 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.2 0.7 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.2 1.7 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.2 0.7 GO:0031932 TORC2 complex(GO:0031932)
0.2 0.8 GO:0035061 interchromatin granule(GO:0035061)
0.2 2.2 GO:0005880 nuclear microtubule(GO:0005880)
0.2 0.6 GO:0009527 plastid outer membrane(GO:0009527)
0.2 0.6 GO:0005655 nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.2 1.5 GO:0035861 site of double-strand break(GO:0035861)
0.2 3.0 GO:0009986 cell surface(GO:0009986)
0.2 0.9 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.1 8.4 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 1.9 GO:0045298 tubulin complex(GO:0045298)
0.1 1.0 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 1.1 GO:0000346 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.1 1.2 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 2.5 GO:0000178 exosome (RNase complex)(GO:0000178)
0.1 2.5 GO:0031012 extracellular matrix(GO:0031012)
0.1 1.3 GO:0017119 Golgi transport complex(GO:0017119)
0.1 0.4 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.1 1.2 GO:0072546 ER membrane protein complex(GO:0072546)
0.1 1.2 GO:0031209 SCAR complex(GO:0031209)
0.1 0.4 GO:0031897 Tic complex(GO:0031897)
0.1 0.8 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.1 0.8 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.1 0.3 GO:1990429 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.1 11.8 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.1 2.4 GO:0005686 U2 snRNP(GO:0005686)
0.1 1.0 GO:0005663 DNA replication factor C complex(GO:0005663)
0.1 3.6 GO:0009504 cell plate(GO:0009504)
0.1 7.5 GO:0000138 Golgi trans cisterna(GO:0000138)
0.1 0.5 GO:0000347 THO complex(GO:0000347)
0.1 0.5 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.1 0.8 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.1 1.0 GO:0072686 mitotic spindle(GO:0072686)
0.1 0.6 GO:0055037 recycling endosome(GO:0055037)
0.1 6.0 GO:0016604 nuclear body(GO:0016604)
0.1 0.7 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.4 GO:0043189 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.1 0.3 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 3.4 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 1.4 GO:0009508 plastid chromosome(GO:0009508)
0.1 11.2 GO:0005802 trans-Golgi network(GO:0005802)
0.1 1.3 GO:0042644 chloroplast nucleoid(GO:0042644)
0.1 1.6 GO:0030136 clathrin-coated vesicle(GO:0030136)
0.1 1.0 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.1 1.3 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.1 0.3 GO:0000786 nucleosome(GO:0000786)
0.1 0.6 GO:1903561 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.1 0.7 GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.1 36.3 GO:0009570 chloroplast stroma(GO:0009570)
0.1 0.1 GO:1990752 microtubule end(GO:1990752)
0.0 0.9 GO:1990351 transporter complex(GO:1990351)
0.0 0.9 GO:0000325 plant-type vacuole(GO:0000325)
0.0 3.1 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 5.5 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.8 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.7 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 11.4 GO:0005730 nucleolus(GO:0005730)
0.0 0.6 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 34.5 GO:0009506 cell-cell junction(GO:0005911) plasmodesma(GO:0009506) cell junction(GO:0030054) symplast(GO:0055044)
0.0 1.0 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 1.0 GO:0000145 exocyst(GO:0000145)
0.0 0.2 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.3 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.0 24.3 GO:0005794 Golgi apparatus(GO:0005794)
0.0 0.2 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.0 6.2 GO:0009941 chloroplast envelope(GO:0009941)
0.0 2.8 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 78.4 GO:0005829 cytosol(GO:0005829)
0.0 1.8 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.4 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 0.7 GO:0031977 thylakoid lumen(GO:0031977)
0.0 0.2 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.0 0.5 GO:0042651 thylakoid membrane(GO:0042651)
0.0 0.5 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.2 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 0.2 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 13.8 GO:0005783 endoplasmic reticulum(GO:0005783)
0.0 0.3 GO:0031201 SNARE complex(GO:0031201)
0.0 0.2 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.0 0.3 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 2.0 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.3 GO:0035097 histone methyltransferase complex(GO:0035097)
0.0 0.2 GO:0000109 nucleotide-excision repair complex(GO:0000109)
0.0 0.6 GO:0030964 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 1.8 GO:0009534 chloroplast thylakoid(GO:0009534)
0.0 0.2 GO:0005746 mitochondrial respiratory chain(GO:0005746)
0.0 24.4 GO:0005886 plasma membrane(GO:0005886)
0.0 0.1 GO:0019898 extrinsic component of membrane(GO:0019898)
0.0 0.5 GO:0009505 plant-type cell wall(GO:0009505)
0.0 1.3 GO:0005774 vacuolar membrane(GO:0005774) vacuolar part(GO:0044437)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.9 17.2 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
1.7 6.8 GO:0030410 nicotianamine synthase activity(GO:0030410)
1.0 3.9 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
1.0 2.9 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
1.0 8.7 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.9 5.2 GO:0051996 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.8 11.3 GO:0016157 sucrose synthase activity(GO:0016157)
0.8 8.3 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.7 2.9 GO:0050815 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.7 2.7 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.6 19.0 GO:0048029 monosaccharide binding(GO:0048029)
0.6 1.8 GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity(GO:0003864)
0.6 1.7 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.6 1.7 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.5 1.6 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.5 1.6 GO:0035591 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.5 1.6 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.5 5.4 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.5 3.2 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.5 1.5 GO:0070336 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.5 1.5 GO:0031210 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.5 2.0 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.5 1.4 GO:0019788 NEDD8 transferase activity(GO:0019788)
0.4 2.6 GO:0030544 Hsp70 protein binding(GO:0030544)
0.4 5.6 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.4 1.7 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.4 1.7 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.4 2.1 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.4 2.5 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.4 1.1 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.4 1.1 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.4 3.4 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.4 4.1 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.4 1.1 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.4 2.9 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.4 5.7 GO:0016018 cyclosporin A binding(GO:0016018)
0.4 1.1 GO:0008936 nicotinamidase activity(GO:0008936)
0.3 2.4 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.3 7.0 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.3 2.7 GO:0017091 AU-rich element binding(GO:0017091)
0.3 1.3 GO:0050347 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.3 1.9 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.3 2.2 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.3 0.9 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.3 0.9 GO:0035671 enone reductase activity(GO:0035671)
0.3 1.5 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.3 0.9 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.3 2.0 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.3 1.1 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.3 1.1 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.3 3.2 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.3 0.8 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.3 3.2 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.3 4.0 GO:0051879 Hsp90 protein binding(GO:0051879)
0.3 0.8 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.3 0.8 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.3 1.3 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.3 1.5 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.3 1.0 GO:0005353 fructose transmembrane transporter activity(GO:0005353)
0.2 1.7 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.2 2.5 GO:0031078 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.2 5.4 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.2 1.7 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.2 0.7 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.2 3.0 GO:0002020 protease binding(GO:0002020)
0.2 0.7 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.2 1.8 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.2 1.4 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.2 0.7 GO:0019779 Atg8 ligase activity(GO:0019776) Atg8 activating enzyme activity(GO:0019779)
0.2 1.8 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.2 2.4 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.2 1.8 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.2 1.1 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.2 2.4 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.2 1.9 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.2 1.3 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.2 2.3 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.2 1.0 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.2 0.6 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.2 1.2 GO:0016312 inositol bisphosphate phosphatase activity(GO:0016312)
0.2 1.0 GO:0030623 U5 snRNA binding(GO:0030623)
0.2 1.7 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.2 1.1 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.2 2.2 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.2 1.4 GO:0043995 histone acetyltransferase activity (H4-K5 specific)(GO:0043995)
0.2 1.6 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.2 1.2 GO:0051018 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.2 1.2 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.2 0.8 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.2 0.7 GO:0016748 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.2 0.5 GO:0008481 sphinganine kinase activity(GO:0008481)
0.2 0.8 GO:1902936 phosphatidylinositol bisphosphate binding(GO:1902936)
0.2 1.2 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.2 1.1 GO:0047893 flavonol 3-O-glucosyltransferase activity(GO:0047893) daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.2 0.6 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.1 1.0 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.4 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 1.0 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.1 0.7 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.6 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.1 0.7 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.1 3.6 GO:0004568 chitinase activity(GO:0004568)
0.1 1.3 GO:0009922 fatty acid elongase activity(GO:0009922)
0.1 0.4 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.1 0.4 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.1 1.0 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.1 7.3 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 0.5 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.1 0.4 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.1 1.2 GO:0004096 catalase activity(GO:0004096)
0.1 0.8 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.5 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.1 0.4 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.1 2.9 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.1 0.8 GO:0008022 protein C-terminus binding(GO:0008022)
0.1 0.9 GO:0001653 peptide receptor activity(GO:0001653)
0.1 0.5 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.1 0.8 GO:0004471 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471)
0.1 0.6 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.1 0.3 GO:0004046 aminoacylase activity(GO:0004046)
0.1 7.2 GO:0043621 protein self-association(GO:0043621)
0.1 0.3 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.1 0.5 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.1 2.2 GO:0030515 snoRNA binding(GO:0030515)
0.1 1.6 GO:0031369 translation initiation factor binding(GO:0031369)
0.1 0.5 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.1 1.4 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.1 0.4 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.1 1.3 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 1.2 GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water(GO:0016717)
0.1 0.7 GO:0008378 galactosyltransferase activity(GO:0008378)
0.1 1.2 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.1 0.4 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 1.1 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 1.4 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.1 1.3 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.1 0.3 GO:0090422 thiamine pyrophosphate transporter activity(GO:0090422) azole transmembrane transporter activity(GO:1901474)
0.1 0.4 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.1 2.6 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 2.5 GO:0097602 cullin family protein binding(GO:0097602)
0.1 0.4 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.1 0.4 GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity(GO:0004719)
0.1 0.4 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.1 0.6 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.1 0.2 GO:0010331 gibberellin binding(GO:0010331)
0.1 1.1 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 1.0 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.1 1.5 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.1 0.4 GO:0000150 recombinase activity(GO:0000150)
0.1 0.3 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.1 0.8 GO:0004311 farnesyltranstransferase activity(GO:0004311)
0.1 0.4 GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity(GO:0035242)
0.1 0.4 GO:0047780 citrate dehydratase activity(GO:0047780)
0.1 1.2 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.1 1.0 GO:0030674 protein binding, bridging(GO:0030674)
0.1 1.2 GO:0035064 methylated histone binding(GO:0035064)
0.1 0.3 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.1 1.4 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.1 2.4 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.7 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.1 0.2 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.1 0.6 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.1 2.3 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.2 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.1 0.6 GO:0004526 ribonuclease P activity(GO:0004526)
0.1 1.6 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.1 0.9 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.1 0.9 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.1 0.8 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 0.5 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 1.0 GO:0070717 poly-purine tract binding(GO:0070717)
0.1 0.9 GO:0008097 5S rRNA binding(GO:0008097)
0.1 0.2 GO:0016040 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.1 0.5 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 0.8 GO:0016208 AMP binding(GO:0016208)
0.1 0.5 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.1 1.8 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.1 0.4 GO:0018488 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.1 4.0 GO:0036459 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.1 0.5 GO:0031386 protein tag(GO:0031386)
0.1 0.4 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.5 GO:0035198 miRNA binding(GO:0035198)
0.1 0.5 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 3.2 GO:0016879 ligase activity, forming carbon-nitrogen bonds(GO:0016879)
0.1 0.3 GO:0004049 anthranilate synthase activity(GO:0004049)
0.1 2.6 GO:0005319 lipid transporter activity(GO:0005319)
0.1 0.3 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 0.2 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.1 2.6 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 0.4 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.1 1.0 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 0.2 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.0 0.2 GO:0030371 translation repressor activity(GO:0030371)
0.0 0.5 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.3 GO:0030332 cyclin binding(GO:0030332)
0.0 2.4 GO:0008094 DNA-dependent ATPase activity(GO:0008094)
0.0 0.1 GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity(GO:0008534)
0.0 1.8 GO:0016831 carboxy-lyase activity(GO:0016831)
0.0 0.1 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 2.6 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.9 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 1.3 GO:0044389 ubiquitin-like protein ligase binding(GO:0044389)
0.0 0.3 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 3.8 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.5 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.3 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 2.0 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.7 GO:0017025 TBP-class protein binding(GO:0017025)
0.0 1.7 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.0 0.1 GO:0008517 folic acid transporter activity(GO:0008517)
0.0 0.1 GO:0010334 sesquiterpene synthase activity(GO:0010334)
0.0 0.3 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.0 0.3 GO:0050551 myrcene synthase activity(GO:0050551)
0.0 1.1 GO:0031593 polyubiquitin binding(GO:0031593)
0.0 2.1 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 0.3 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.0 0.8 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.5 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.5 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.0 0.4 GO:0005496 steroid binding(GO:0005496)
0.0 0.3 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.3 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.0 0.2 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.0 1.7 GO:0008483 transaminase activity(GO:0008483)
0.0 1.1 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.0 0.6 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 28.4 GO:0044822 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.0 0.1 GO:0051010 microtubule plus-end binding(GO:0051010)
0.0 0.4 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.6 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.2 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.3 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.0 0.1 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.0 0.4 GO:0001098 basal transcription machinery binding(GO:0001098) basal RNA polymerase II transcription machinery binding(GO:0001099)
0.0 0.4 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.0 0.2 GO:0016531 copper chaperone activity(GO:0016531)
0.0 1.7 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.1 GO:0004127 cytidylate kinase activity(GO:0004127)
0.0 0.3 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 0.3 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.0 4.6 GO:0043492 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances(GO:0016820) ATPase activity, coupled to transmembrane movement of substances(GO:0042626) ATPase activity, coupled to movement of substances(GO:0043492)
0.0 2.1 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.1 GO:0022842 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.0 0.2 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 1.3 GO:0010857 calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 2.1 GO:0003779 actin binding(GO:0003779)
0.0 0.6 GO:0008810 cellulase activity(GO:0008810)
0.0 1.5 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.1 GO:0004765 shikimate kinase activity(GO:0004765)
0.0 0.8 GO:0051536 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.0 0.1 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.0 0.5 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.2 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.0 2.2 GO:0032561 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 0.1 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 2.6 GO:0017171 serine-type peptidase activity(GO:0008236) serine hydrolase activity(GO:0017171)
0.0 2.0 GO:0016887 ATPase activity(GO:0016887)
0.0 0.5 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.1 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 1.6 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.2 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 0.1 GO:0004129 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 2.0 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.0 0.1 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.0 0.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 1.0 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.1 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.3 1.6 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.3 0.3 PID UPA UPAR PATHWAY Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling
0.3 0.8 PID RAS PATHWAY Regulation of Ras family activation
0.2 1.2 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.2 0.8 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.1 1.2 PID ATR PATHWAY ATR signaling pathway
0.1 0.6 PID S1P S1P1 PATHWAY S1P1 pathway
0.1 0.4 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.8 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.4 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.1 0.2 PID BARD1 PATHWAY BARD1 signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.1 6.2 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
1.7 6.8 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.6 1.8 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.4 1.6 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.3 2.1 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.3 0.9 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.3 0.8 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.2 0.7 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.2 1.0 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.2 0.9 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions
0.2 0.5 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.1 0.6 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.1 1.0 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.1 1.9 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 0.2 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.1 1.0 REACTOME METABOLISM OF CARBOHYDRATES Genes involved in Metabolism of carbohydrates
0.0 0.1 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER