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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G11260

Z-value: 3.64

Transcription factors associated with AT5G11260

Gene Symbol Gene ID Gene Info
AT5G11260
AT5G11260 Basic-leucine zipper (bZIP) transcription factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HY5arTal_v1_Chr5_-_3595003_3595073-0.805.7e-04Click!

Activity profile of AT5G11260 motif

Sorted Z-values of AT5G11260 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_-_15378416_15378416 9.14 AT5G38410.3
AT5G38410.2
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
arTal_v1_Chr5_-_15378642_15378642 9.11 AT5G38410.1
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
arTal_v1_Chr2_+_15706285_15706285 7.31 AT2G37430.1
ZAT11
C2H2 and C2HC zinc fingers superfamily protein
arTal_v1_Chr1_+_22628264_22628409 7.08 AT1G61340.1
AT1G61340.2
FBS1
F-box family protein
arTal_v1_Chr2_-_14863412_14863412 6.92 AT2G35300.1
LEA18
Late embryogenesis abundant protein, group 1 protein
arTal_v1_Chr2_+_17137829_17137846 6.85 AT2G41100.4
AT2G41100.7
TCH3
Calcium-binding EF hand family protein
arTal_v1_Chr5_+_4488476_4488476 6.83 AT5G13930.1
TT4
Chalcone and stilbene synthase family protein
arTal_v1_Chr2_+_17137427_17137431 6.74 AT2G41100.5
AT2G41100.6
TCH3
Calcium-binding EF hand family protein
arTal_v1_Chr5_-_216773_216773 6.46 AT5G01550.1
LECRKA4.2
lectin receptor kinase a4.1
arTal_v1_Chr2_+_17138065_17138065 6.45 AT2G41100.1
TCH3
Calcium-binding EF hand family protein
arTal_v1_Chr2_+_17138330_17138330 6.33 AT2G41100.2
TCH3
Calcium-binding EF hand family protein
arTal_v1_Chr2_-_9741463_9741463 6.17 AT2G22880.1
AT2G22880
VQ motif-containing protein
arTal_v1_Chr1_-_2190784_2190784 6.16 AT1G07135.1
AT1G07135
glycine-rich protein
arTal_v1_Chr2_+_17137037_17137037 6.11 AT2G41100.3
TCH3
Calcium-binding EF hand family protein
arTal_v1_Chr5_+_2803833_2803957 5.97 AT5G08640.1
AT5G08640.2
FLS1
flavonol synthase 1
arTal_v1_Chr1_+_6697874_6697874 5.96 AT1G19380.1
AT1G19380
sugar, putative (DUF1195)
arTal_v1_Chr5_-_20801437_20801437 5.94 AT5G51190.1
AT5G51190
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr4_+_16354857_16354857 5.82 AT4G34150.1
AT4G34150
Calcium-dependent lipid-binding (CaLB domain) family protein
arTal_v1_Chr5_-_17166032_17166032 5.80 AT5G42800.1
DFR
dihydroflavonol 4-reductase
arTal_v1_Chr1_-_28767517_28767517 5.76 AT1G76650.2
CML38
calmodulin-like 38
arTal_v1_Chr4_+_9759203_9759203 5.67 AT4G17500.1
ERF-1
ethylene responsive element binding factor 1
arTal_v1_Chr4_+_5740219_5740219 5.56 AT4G08950.1
EXO
Phosphate-responsive 1 family protein
arTal_v1_Chr4_-_13664621_13664621 5.35 AT4G27280.1
AT4G27280
Calcium-binding EF-hand family protein
arTal_v1_Chr1_-_28767712_28767712 5.34 AT1G76650.1
CML38
calmodulin-like 38
arTal_v1_Chr3_+_20776220_20776265 5.29 AT3G55980.2
AT3G55980.1
SZF1
salt-inducible zinc finger 1
arTal_v1_Chr5_-_18371021_18371021 5.21 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
arTal_v1_Chr1_+_6389399_6389399 5.15 AT1G18570.1
MYB51
myb domain protein 51
arTal_v1_Chr3_-_5310988_5310988 5.08 AT3G15670.1
AT3G15670
Late embryogenesis abundant protein (LEA) family protein
arTal_v1_Chr4_-_12006209_12006209 4.95 AT4G22880.2
AT4G22880.1
AT4G22880.3
LDOX
leucoanthocyanidin dioxygenase
arTal_v1_Chr4_+_17752079_17752079 4.95 AT4G37770.1
ACS8
1-amino-cyclopropane-1-carboxylate synthase 8
arTal_v1_Chr1_+_28746833_28746833 4.94 AT1G76600.1
AT1G76600
poly polymerase
arTal_v1_Chr2_+_11566288_11566288 4.74 AT2G27080.1
AT2G27080
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr5_-_25843555_25843555 4.72 AT5G64660.1
CMPG2
CYS, MET, PRO, and GLY protein 2
arTal_v1_Chr1_+_24637196_24637196 4.69 AT1G66160.2
AT1G66160.1
CMPG1
CYS, MET, PRO, and GLY protein 1
arTal_v1_Chr5_-_37999_37999 4.63 AT5G01100.1
FRB1
O-fucosyltransferase family protein
arTal_v1_Chr3_-_19427230_19427230 4.62 AT3G52400.1
SYP122
syntaxin of plants 122
arTal_v1_Chr1_-_28768138_28768138 4.47 AT1G76650.3
CML38
calmodulin-like 38
arTal_v1_Chr1_-_7105869_7106121 4.46 AT1G20510.2
AT1G20510.3
AT1G20510.1
OPCL1
OPC-8:0 CoA ligase1
arTal_v1_Chr1_-_8912642_8912642 4.38 AT1G25400.2
AT1G25400
transmembrane protein
arTal_v1_Chr2_-_14862178_14862178 4.32 AT2G35290.1
AT2G35290
hypothetical protein
arTal_v1_Chr1_-_8912822_8912822 4.31 AT1G25400.1
AT1G25400
transmembrane protein
arTal_v1_Chr5_-_26607012_26607012 4.30 AT5G66650.1
AT5G66650
calcium uniporter (DUF607)
arTal_v1_Chr3_+_21059785_21059785 4.28 AT3G56880.1
AT3G56880
VQ motif-containing protein
arTal_v1_Chr3_+_618398_618398 4.21 AT3G02840.1
AT3G02840
ARM repeat superfamily protein
arTal_v1_Chr1_+_2927502_2927502 4.07 AT1G09070.1
SRC2
soybean gene regulated by cold-2
arTal_v1_Chr3_-_7656053_7656053 4.06 AT3G21720.1
ICL
isocitrate lyase
arTal_v1_Chr1_-_27640643_27640643 4.02 AT1G73500.1
MKK9
MAP kinase kinase 9
arTal_v1_Chr1_-_8537780_8537780 3.97 AT1G24140.1
AT1G24140
Matrixin family protein
arTal_v1_Chr1_+_5977323_5977323 3.92 AT1G17420.1
LOX3
lipoxygenase 3
arTal_v1_Chr2_-_16529494_16529494 3.87 AT2G39650.2
AT2G39650.1
AT2G39650
cruciferin (DUF506)
arTal_v1_Chr5_+_24915807_24915807 3.86 AT5G62020.1
HSFB2A
heat shock transcription factor B2A
arTal_v1_Chr2_-_16198577_16198577 3.82 AT2G38750.1
ANNAT4
annexin 4
arTal_v1_Chr2_+_11563933_11563933 3.81 AT2G27080.2
AT2G27080
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr2_-_16780368_16780368 3.72 AT2G40170.1
GEA6
Stress induced protein
arTal_v1_Chr2_-_16198832_16198832 3.72 AT2G38750.2
ANNAT4
annexin 4
arTal_v1_Chr5_-_23289635_23289635 3.62 AT5G57510.1
AT5G57510
cotton fiber protein
arTal_v1_Chr2_-_9564850_9564850 3.44 AT2G22500.1
UCP5
uncoupling protein 5
arTal_v1_Chr2_-_13609955_13609955 3.41 AT2G31980.1
CYS2
PHYTOCYSTATIN 2
arTal_v1_Chr5_-_122507_122525 3.34 AT5G01300.2
AT5G01300.1
AT5G01300.3
AT5G01300
PEBP (phosphatidylethanolamine-binding protein) family protein
arTal_v1_Chr1_+_29178705_29178705 3.32 AT1G77640.1
AT1G77640
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_+_6299669_6299669 3.25 AT1G18300.1
NUDT4
nudix hydrolase homolog 4
arTal_v1_Chr2_+_11037303_11037367 3.24 AT2G25890.2
AT2G25890.1
AT2G25890
Oleosin family protein
arTal_v1_Chr2_-_11800928_11800928 3.06 AT2G27660.1
AT2G27660
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr5_-_26459624_26459654 3.05 AT5G66210.4
AT5G66210.5
AT5G66210.1
AT5G66210.3
AT5G66210.2
AT5G66210.6
CPK28
calcium-dependent protein kinase 28
arTal_v1_Chr3_+_296024_296051 2.96 AT3G01830.2
AT3G01830.1
AT3G01830
Calcium-binding EF-hand family protein
arTal_v1_Chr3_-_21780663_21780663 2.96 AT3G58930.5
AT3G58930.1
AT3G58930.3
AT3G58930.4
AT3G58930
F-box/RNI-like superfamily protein
arTal_v1_Chr2_-_18077517_18077517 2.89 AT2G43570.1
CHI
chitinase
arTal_v1_Chr5_+_25097944_25098027 2.82 AT5G62520.1
AT5G62520.2
SRO5
similar to RCD one 5
arTal_v1_Chr3_-_18883033_18883033 2.79 AT3G50800.1
AT3G50800
hypothetical protein
arTal_v1_Chr5_-_26096114_26096114 2.76 AT5G65300.1
AT5G65300
hypothetical protein
arTal_v1_Chr1_+_21395096_21395096 2.75 AT1G57770.1
AT1G57770
FAD/NAD(P)-binding oxidoreductase family protein
arTal_v1_Chr1_+_7696427_7696427 2.70 AT1G21910.1
DREB26
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_+_18228768_18228805 2.68 AT5G45110.1
AT5G45110.2
NPR3
NPR1-like protein 3
arTal_v1_Chr2_+_15192480_15192480 2.68 AT2G36220.1
AT2G36220
hypothetical protein
arTal_v1_Chr1_-_27646743_27646743 2.68 AT1G73540.1
NUDT21
nudix hydrolase homolog 21
arTal_v1_Chr1_+_6622055_6622114 2.58 AT1G19180.3
AT1G19180.2
JAZ1
jasmonate-zim-domain protein 1
arTal_v1_Chr1_+_4419714_4419714 2.56 AT1G12950.1
RSH2
root hair specific 2
arTal_v1_Chr3_+_23201032_23201033 2.54 AT3G62720.2
AT3G62720.1
XT1
xylosyltransferase 1
arTal_v1_Chr1_+_618061_618061 2.50 AT1G02810.1
AT1G02810
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr1_+_6621777_6621777 2.47 AT1G19180.1
JAZ1
jasmonate-zim-domain protein 1
arTal_v1_Chr5_-_17758275_17758336 2.35 AT5G44120.2
AT5G44120.1
AT5G44120.3
CRA1
RmlC-like cupins superfamily protein
arTal_v1_Chr1_+_27127170_27127170 2.29 AT1G72100.1
AT1G72100
late embryogenesis abundant domain-containing protein / LEA domain-containing protein
arTal_v1_Chr4_+_14579563_14579563 2.27 AT4G29780.1
AT4G29780
nuclease
arTal_v1_Chr2_-_10835483_10835483 2.24 AT2G25460.1
AT2G25460
EEIG1/EHBP1 protein amino-terminal domain protein
arTal_v1_Chr2_-_10835660_10835660 2.18 AT2G25460.2
AT2G25460
EEIG1/EHBP1 protein amino-terminal domain protein
arTal_v1_Chr2_-_14222254_14222254 2.16 AT2G33580.1
LYK5
Protein kinase superfamily protein
arTal_v1_Chr2_-_12277245_12277245 2.15 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr1_-_6627688_6627688 2.14 AT1G19210.1
AT1G19210
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_-_19299174_19299174 2.13 AT5G47590.1
AT5G47590.2
AT5G47590
Heat shock protein HSP20/alpha crystallin family
arTal_v1_Chr1_-_5957511_5957511 2.08 AT1G17380.1
AT1G17380.2
JAZ5
jasmonate-zim-domain protein 5
arTal_v1_Chr2_-_12277417_12277417 2.06 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr3_+_22379740_22379740 2.06 AT3G60550.1
CYCP3%3B2
cyclin p3;2
arTal_v1_Chr5_+_1563286_1563308 2.05 AT5G05270.1
AT5G05270.2
CHIL
Chalcone-flavanone isomerase family protein
arTal_v1_Chr3_+_2749908_2749915 2.02 AT3G09010.1
AT3G09010.2
AT3G09010
Protein kinase superfamily protein
arTal_v1_Chr5_-_25804980_25804980 2.00 AT5G64550.1
AT5G64550
loricrin-like protein
arTal_v1_Chr2_-_1861934_1862064 1.99 AT2G05160.3
AT2G05160.1
AT2G05160.2
AT2G05160
CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein
arTal_v1_Chr3_-_21780433_21780433 1.96 AT3G58930.2
AT3G58930
F-box/RNI-like superfamily protein
arTal_v1_Chr5_-_763322_763322 1.96 AT5G03210.1
DIP2
E3 ubiquitin-protein ligase
arTal_v1_Chr5_-_8167776_8167776 1.93 AT5G24140.1
SQP2
squalene monooxygenase 2
arTal_v1_Chr5_-_4423095_4423095 1.92 AT5G13700.1
PAO1
polyamine oxidase 1
arTal_v1_Chr2_+_18236789_18236789 1.89 AT2G44080.1
ARL
ARGOS-like protein
arTal_v1_Chr2_-_15084559_15084559 1.87 AT2G35930.1
PUB23
plant U-box 23
arTal_v1_Chr5_-_19381190_19381190 1.86 AT5G47850.1
CCR4
CRINKLY4 related 4
arTal_v1_Chr5_-_21125065_21125065 1.86 AT5G52020.1
AT5G52020
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_-_17650375_17650375 1.85 AT5G43890.1
YUC5
Flavin-binding monooxygenase family protein
arTal_v1_Chr2_+_17360374_17360419 1.82 AT2G41640.1
AT2G41640.3
AT2G41640.2
AT2G41640
Glycosyltransferase family 61 protein
arTal_v1_Chr1_+_5998765_5998814 1.80 AT1G17460.3
AT1G17460.1
AT1G17460.2
TRFL3
TRF-like 3
arTal_v1_Chr2_-_14146471_14146555 1.77 AT2G33380.2
AT2G33380.1
RD20
Caleosin-related family protein
arTal_v1_Chr5_+_20090648_20090648 1.74 AT5G49520.1
WRKY48
WRKY DNA-binding protein 48
arTal_v1_Chr3_+_9195334_9195334 1.72 AT3G25250.1
AGC2-1
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
arTal_v1_Chr4_-_17289728_17289728 1.62 AT4G36670.1
PMT6
Major facilitator superfamily protein
arTal_v1_Chr1_-_5957255_5957255 1.55 AT1G17380.3
JAZ5
jasmonate-zim-domain protein 5
arTal_v1_Chr1_+_6463849_6463849 1.55 AT1G18740.1
AT1G18740
ROH1, putative (DUF793)
arTal_v1_Chr2_+_12821569_12821569 1.54 AT2G30040.1
MAPKKK14
mitogen-activated protein kinase kinase kinase 14
arTal_v1_Chr3_-_20475332_20475332 1.50 AT3G55240.1
AT3G55240
Plant protein 1589 of unknown function
arTal_v1_Chr1_-_8350068_8350068 1.49 AT1G23540.2
PERK12
Protein kinase superfamily protein
arTal_v1_Chr4_+_16451876_16451876 1.48 AT4G34410.1
RRTF1
redox responsive transcription factor 1
arTal_v1_Chr1_-_8349786_8349786 1.47 AT1G23540.1
PERK12
Protein kinase superfamily protein
arTal_v1_Chr3_+_20296130_20296130 1.45 AT3G54810.2
BME3
Plant-specific GATA-type zinc finger transcription factor family protein
arTal_v1_Chr3_+_20296416_20296416 1.44 AT3G54810.1
BME3
Plant-specific GATA-type zinc finger transcription factor family protein
arTal_v1_Chr1_+_21237839_21237888 1.44 AT1G56660.1
AT1G56660.2
AT1G56660
MAEBL domain protein
arTal_v1_Chr5_+_20730565_20730565 1.43 AT5G50950.3
FUM2
FUMARASE 2
arTal_v1_Chr1_-_21412283_21412283 1.42 AT1G57800.2
AT1G57800.1
VIM5
zinc finger (C3HC4-type RING finger) family protein
arTal_v1_Chr5_-_763480_763480 1.41 AT5G03210.2
DIP2
E3 ubiquitin-protein ligase
arTal_v1_Chr1_+_12168768_12168768 1.30 AT1G33560.1
ADR1
Disease resistance protein (CC-NBS-LRR class) family
arTal_v1_Chr4_-_13644479_13644507 1.21 AT4G27250.2
AT4G27250.1
AT4G27250
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr5_+_25090091_25090091 1.20 AT5G62490.1
HVA22B
HVA22 homologue B
arTal_v1_Chr2_-_17837618_17837618 1.20 AT2G42870.1
PAR1
phy rapidly regulated 1
arTal_v1_Chr2_+_17902370_17902370 1.19 AT2G43050.1
ATPMEPCRD
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr4_-_17047315_17047315 1.15 AT4G36030.1
ARO3
armadillo repeat only 3
arTal_v1_Chr1_-_19556945_19556945 1.08 AT1G52490.1
AT1G52490
F-box/associated interaction domain protein
arTal_v1_Chr5_+_20729612_20729612 1.07 AT5G50950.4
AT5G50950.1
FUM2
FUMARASE 2
arTal_v1_Chr5_+_24102814_24102814 1.07 AT5G59820.1
RHL41
C2H2-type zinc finger family protein
arTal_v1_Chr5_+_2560328_2560328 1.06 AT5G07990.1
TT7
Cytochrome P450 superfamily protein
arTal_v1_Chr4_-_13022996_13022996 1.05 AT4G25490.1
CBF1
C-repeat/DRE binding factor 1
arTal_v1_Chr1_+_907523_907651 1.04 AT1G03630.1
AT1G03630.2
POR C
protochlorophyllide oxidoreductase C
arTal_v1_Chr5_+_20729431_20729431 1.02 AT5G50950.2
FUM2
FUMARASE 2
arTal_v1_Chr5_+_703268_703268 1.02 AT5G03000.1
AT5G03000
Galactose oxidase/kelch repeat superfamily protein
arTal_v1_Chr3_-_16923299_16923299 0.98 AT3G46080.1
AT3G46080
C2H2-type zinc finger family protein
arTal_v1_Chr5_-_18506382_18506382 0.98 AT5G45630.1
AT5G45630
senescence regulator (Protein of unknown function, DUF584)
arTal_v1_Chr4_+_17516424_17516424 0.97 AT4G37230.1
AT4G37230
Photosystem II manganese-stabilising protein (PsbO) family
arTal_v1_Chr3_-_3275551_3275551 0.94 AT3G10510.1
AT3G10510
Galactose oxidase/kelch repeat superfamily protein
arTal_v1_Chr1_-_7230240_7230240 0.92 AT1G20800.1
AT1G20800
F-box/associated interaction domain protein
arTal_v1_Chr2_+_15750915_15750915 0.91 AT2G37530.1
AT2G37530
forkhead box protein G1
arTal_v1_Chr5_-_21651626_21651713 0.90 AT5G53370.1
AT5G53370.2
PMEPCRF
pectin methylesterase PCR fragment F
arTal_v1_Chr5_-_23999837_23999837 0.86 AT5G59550.1
RDUF2
zinc finger (C3HC4-type RING finger) family protein
arTal_v1_Chr1_-_29513100_29513100 0.85 AT1G78440.1
ATGA2OX1
gibberellin 2-beta-dioxygenase
arTal_v1_Chr1_+_5290582_5290582 0.82 AT1G15380.1
GLYI4
Lactoylglutathione lyase / glyoxalase I family protein
arTal_v1_Chr5_-_24000166_24000166 0.81 AT5G59550.2
RDUF2
zinc finger (C3HC4-type RING finger) family protein
arTal_v1_Chr1_+_5290747_5290747 0.80 AT1G15380.2
GLYI4
Lactoylglutathione lyase / glyoxalase I family protein
arTal_v1_Chr1_+_17802863_17802863 0.77 AT1G48220.1
AT1G48220
Protein kinase superfamily protein
arTal_v1_Chr1_-_8486002_8486002 0.77 AT1G23980.1
AT1G23980
RING/U-box superfamily protein
arTal_v1_Chr4_-_17050608_17050608 0.74 AT4G36040.1
J11
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr3_+_1864273_1864326 0.73 AT3G06160.2
AT3G06160.1
AT3G06160
AP2/B3-like transcriptional factor family protein
arTal_v1_Chr1_+_1459091_1459091 0.73 AT1G05080.1
AT1G05080
F-box/RNI-like/FBD-like domains-containing protein
arTal_v1_Chr3_-_14999235_14999235 0.72 AT3G42930.1
AT3G42930

arTal_v1_Chr2_+_15617635_15617635 0.71 AT2G37180.1
RD28
Aquaporin-like superfamily protein
arTal_v1_Chr5_-_7539685_7539685 0.68 AT5G22670.1
AT5G22670
F-box/RNI-like/FBD-like domains-containing protein
arTal_v1_Chr1_+_8050770_8050860 0.66 AT1G22750.1
AT1G22750.4
AT1G22750.3
AT1G22750.2
AT1G22750
transmembrane protein
arTal_v1_Chr1_+_25880155_25880155 0.66 AT1G68840.1
RAV2
related to ABI3/VP1 2
arTal_v1_Chr5_-_24980075_24980075 0.64 AT5G62180.1
CXE20
carboxyesterase 20
arTal_v1_Chr1_+_23431730_23431730 0.63 AT1G63190.1
AT1G63190
Cystatin/monellin superfamily protein
arTal_v1_Chr1_+_25880323_25880323 0.62 AT1G68840.2
RAV2
related to ABI3/VP1 2
arTal_v1_Chr4_+_16260481_16260520 0.61 AT4G33920.2
AT4G33920.1
AT4G33920.3
AT4G33920
Protein phosphatase 2C family protein
arTal_v1_Chr3_-_5775841_5775841 0.54 AT3G16910.1
AAE7
acyl-activating enzyme 7
arTal_v1_Chr4_+_15410078_15410078 0.54 AT4G31870.1
AT4G31870.2
GPX7
glutathione peroxidase 7
arTal_v1_Chr4_+_11405812_11405812 0.52 AT4G21420.1
AT4G21420

arTal_v1_Chr5_+_1602205_1602205 0.48 AT5G05410.2
AT5G05410.1
DREB2A
DRE-binding protein 2A
arTal_v1_Chr3_-_20431597_20431597 0.44 AT3G55120.1
TT5
Chalcone-flavanone isomerase family protein
arTal_v1_Chr1_-_3817216_3817216 0.43 AT1G11340.1
AT1G11340
G-type lectin S-receptor-like Serine/Threonine-kinase
arTal_v1_Chr4_+_2618372_2618372 0.40 AT4G05100.1
MYB74
myb domain protein 74
arTal_v1_Chr1_-_19822399_19822399 0.39 AT1G53170.1
ERF8
ethylene response factor 8
arTal_v1_Chr3_-_16731511_16731511 0.39 AT3G45580.1
AT3G45580
RING/U-box protein with C6HC-type zinc finger
arTal_v1_Chr3_+_1865266_1865274 0.37 AT3G06160.3
AT3G06160.4
AT3G06160.5
AT3G06160
AP2/B3-like transcriptional factor family protein
arTal_v1_Chr2_-_13800099_13800099 0.36 AT2G32510.1
MAPKKK17
mitogen-activated protein kinase kinase kinase 17
arTal_v1_Chr5_+_5033933_5034005 0.36 AT5G15510.3
AT5G15510.1
AT5G15510.4
AT5G15510.2
AT5G15510
TPX2 (targeting protein for Xklp2) protein family
arTal_v1_Chr5_-_26083066_26083066 0.36 AT5G65260.1
AT5G65260
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr4_+_7600510_7600510 0.31 AT4G13010.1
AT4G13010
Oxidoreductase, zinc-binding dehydrogenase family protein
arTal_v1_Chr3_+_8078789_8078789 0.28 AT3G22830.1
HSFA6B
heat shock transcription factor A6B
arTal_v1_Chr1_-_21911233_21911289 0.23 AT1G59640.2
AT1G59640.1
BPEp
transcription factor BIG PETAL P (BPE)
arTal_v1_Chr5_+_26894778_26894778 0.22 AT5G67400.1
RHS19
root hair specific 19
arTal_v1_Chr5_+_21634424_21634424 0.21 AT5G53310.1
AT5G53310
myosin heavy chain-like protein
arTal_v1_Chr1_+_25765718_25765718 0.19 AT1G68620.1
AT1G68620
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_+_3057975_3057975 0.17 AT1G09480.1
AT1G09480
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_+_3058395_3058395 0.16 AT1G09480.2
AT1G09480
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr5_-_276877_276877 0.16 AT5G01730.5
SCAR4
SCAR family protein 4
arTal_v1_Chr3_+_4444554_4444554 0.15 AT3G13600.1
AT3G13600
calmodulin-binding family protein
arTal_v1_Chr2_-_11453843_11453947 0.15 AT2G26860.2
AT2G26860.1
AT2G26860
FBD, F-box and Leucine Rich Repeat domains containing protein
arTal_v1_Chr2_-_14751326_14751326 0.12 AT2G34990.2
AT2G34990
RING/U-box superfamily protein
arTal_v1_Chr2_-_12996012_12996012 0.10 AT2G30490.1
C4H
cinnamate-4-hydroxylase
arTal_v1_Chr1_-_3817420_3817420 0.09 AT1G11340.2
AT1G11340.3
AT1G11340
G-type lectin S-receptor-like Serine/Threonine-kinase
arTal_v1_Chr5_+_21634581_21634581 0.08 AT5G53310.2
AT5G53310
myosin heavy chain-like protein
arTal_v1_Chr5_-_277886_277886 0.07 AT5G01730.1
AT5G01730.2
AT5G01730.7
SCAR4
SCAR family protein 4
arTal_v1_Chr5_-_276055_276055 0.03 AT5G01730.6
SCAR4
SCAR family protein 4
arTal_v1_Chr3_+_1653264_1653505 0.03 AT3G05670.1
AT3G05670.2
AT3G05670.3
AT3G05670
RING/U-box protein
arTal_v1_Chr5_-_277641_277682 0.03 AT5G01730.9
AT5G01730.3
AT5G01730.8
AT5G01730.10
AT5G01730.4
AT5G01730.11
SCAR4
SCAR family protein 4

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G11260

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
3.2 32.5 GO:0009652 thigmotropism(GO:0009652)
2.4 7.3 GO:0010045 response to nickel cation(GO:0010045)
1.7 5.0 GO:0010446 response to alkaline pH(GO:0010446)
1.2 4.6 GO:0010185 regulation of cellular defense response(GO:0010185)
1.2 4.6 GO:0006097 glyoxylate cycle(GO:0006097)
1.1 3.4 GO:0015709 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
1.0 5.0 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.9 5.2 GO:0016107 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.9 5.1 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.7 2.9 GO:0010272 response to silver ion(GO:0010272)
0.7 7.1 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.7 3.5 GO:0006106 fumarate metabolic process(GO:0006106)
0.6 5.0 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.4 1.8 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.4 2.2 GO:0071323 cellular response to chitin(GO:0071323)
0.4 2.6 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.4 4.6 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.4 1.9 GO:0046208 spermine catabolic process(GO:0046208)
0.4 3.0 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.4 1.9 GO:0046622 positive regulation of organ growth(GO:0046622)
0.4 1.9 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.4 3.9 GO:0080086 stamen filament development(GO:0080086)
0.4 12.6 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.3 4.0 GO:0052317 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.3 2.7 GO:0009061 anaerobic respiration(GO:0009061)
0.3 64.8 GO:0071456 cellular response to hypoxia(GO:0071456)
0.2 8.8 GO:0009813 flavonoid biosynthetic process(GO:0009813)
0.2 1.0 GO:0042549 photosystem II stabilization(GO:0042549)
0.2 7.9 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.2 21.1 GO:0010200 response to chitin(GO:0010200)
0.2 1.4 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.2 4.5 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.1 4.2 GO:0010193 response to ozone(GO:0010193)
0.1 0.9 GO:0045487 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 2.5 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.1 0.5 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 2.7 GO:0050826 response to freezing(GO:0050826)
0.1 1.2 GO:0009641 shade avoidance(GO:0009641)
0.1 14.9 GO:0015979 photosynthesis(GO:0015979)
0.1 3.2 GO:0022611 seed dormancy process(GO:0010162) dormancy process(GO:0022611)
0.1 2.4 GO:0010431 seed maturation(GO:0010431)
0.1 3.4 GO:0051607 defense response to virus(GO:0051607)
0.1 4.5 GO:0009741 response to brassinosteroid(GO:0009741)
0.0 1.9 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 1.9 GO:0009851 auxin biosynthetic process(GO:0009851)
0.0 0.3 GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.0 0.2 GO:0048446 petal morphogenesis(GO:0048446)
0.0 4.2 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 2.9 GO:0045490 pectin catabolic process(GO:0045490)
0.0 6.9 GO:0048868 pollen tube development(GO:0048868)
0.0 0.7 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.0 0.4 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.0 3.6 GO:0046777 protein autophosphorylation(GO:0046777)
0.0 1.0 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 2.6 GO:0009408 response to heat(GO:0009408)
0.0 0.5 GO:0008037 cell recognition(GO:0008037) pollen-pistil interaction(GO:0009875) recognition of pollen(GO:0048544)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 4.1 GO:0009514 glyoxysome(GO:0009514)
0.9 6.2 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.4 7.5 GO:0009986 cell surface(GO:0009986)
0.4 4.1 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.3 2.3 GO:0030139 endocytic vesicle(GO:0030139)
0.2 5.0 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.2 3.5 GO:0045239 tricarboxylic acid cycle enzyme complex(GO:0045239)
0.1 1.4 GO:0005720 nuclear heterochromatin(GO:0005720)
0.1 4.6 GO:0031201 SNARE complex(GO:0031201)
0.1 6.8 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.1 17.8 GO:0048046 apoplast(GO:0048046)
0.1 28.7 GO:0005774 vacuolar membrane(GO:0005774)
0.1 2.5 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 1.0 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.0 5.6 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.3 GO:0031209 SCAR complex(GO:0031209)
0.0 0.3 GO:0016459 myosin complex(GO:0016459)
0.0 5.0 GO:0005777 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 3.7 GO:0031225 anchored component of membrane(GO:0031225)
0.0 4.9 GO:0005730 nucleolus(GO:0005730)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.5 14.9 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
1.5 7.5 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
1.1 3.4 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
1.0 5.2 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
1.0 3.9 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.9 6.0 GO:0045431 flavonol synthase activity(GO:0045431)
0.8 2.5 GO:0045430 chalcone isomerase activity(GO:0045430)
0.7 3.5 GO:0004333 fumarate hydratase activity(GO:0004333)
0.6 1.9 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.5 2.5 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.4 2.6 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.4 5.0 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.3 1.0 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.3 1.0 GO:0010242 oxygen evolving activity(GO:0010242)
0.3 4.5 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.3 4.1 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.3 4.0 GO:0004708 MAP kinase kinase activity(GO:0004708) kinase activator activity(GO:0019209) protein kinase activator activity(GO:0030295)
0.3 3.2 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.2 1.9 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.2 2.8 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.2 53.9 GO:0005509 calcium ion binding(GO:0005509)
0.2 4.2 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.2 2.2 GO:0008061 chitin binding(GO:0008061)
0.2 1.4 GO:0010428 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.2 1.9 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 5.7 GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors(GO:0016706)
0.1 0.5 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.1 1.2 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.1 4.6 GO:0005484 SNAP receptor activity(GO:0005484)
0.1 4.6 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 2.4 GO:0045735 nutrient reservoir activity(GO:0045735)
0.1 0.5 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.1 2.7 GO:0033293 monocarboxylic acid binding(GO:0033293)
0.0 0.3 GO:0071933 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.0 3.2 GO:0019901 protein kinase binding(GO:0019901)
0.0 6.1 GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0016616)
0.0 0.7 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 4.8 GO:0005516 calmodulin binding(GO:0005516)
0.0 11.9 GO:0001067 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)
0.0 1.6 GO:0015144 carbohydrate transmembrane transporter activity(GO:0015144)
0.0 6.1 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.0 6.4 GO:0016757 transferase activity, transferring glycosyl groups(GO:0016757)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.7 REACTOME PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA Genes involved in Processing of Capped Intron-Containing Pre-mRNA
0.2 1.9 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines