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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G14960

Z-value: 1.14

Transcription factors associated with AT5G14960

Gene Symbol Gene ID Gene Info
AT5G14960
AT5G14960 DP-E2F-like 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
DEL2arTal_v1_Chr5_+_4844686_4844686-0.573.2e-02Click!

Activity profile of AT5G14960 motif

Sorted Z-values of AT5G14960 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_+_19428888_19428888 1.47 AT5G47980.1
AT5G47980
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_+_16202142_16202142 1.06 AT5G40460.1
AT5G40460
cyclin-dependent kinase inhibitor SMR3-like protein
arTal_v1_Chr4_+_15230008_15230008 1.03 AT4G31380.1
FLP1
flowering-promoting factor-like protein
arTal_v1_Chr1_+_26464226_26464375 0.82 AT1G70270.2
AT1G70270.1
AT1G70270
transcription factor
arTal_v1_Chr3_+_16271511_16271511 0.77 AT3G44720.1
ADT4
arogenate dehydratase 4
arTal_v1_Chr5_-_442187_442187 0.76 AT5G02220.1
AT5G02220
cyclin-dependent kinase inhibitor
arTal_v1_Chr2_-_14541617_14541617 0.75 AT2G34500.1
CYP710A1
cytochrome P450, family 710, subfamily A, polypeptide 1
arTal_v1_Chr4_+_5668435_5668435 0.71 AT4G08868.1
AT4G08868
hypothetical protein
arTal_v1_Chr5_-_25366012_25366012 0.69 AT5G63270.1
AT5G63270
RPM1-interacting protein 4 (RIN4) family protein
arTal_v1_Chr5_-_20940895_20940895 0.69 AT5G51550.1
EXL3
EXORDIUM like 3
arTal_v1_Chr5_+_26818949_26818949 0.62 AT5G67210.1
IRX15-L
IRREGULAR XYLEM protein (DUF579)
arTal_v1_Chr5_+_5038563_5038563 0.60 AT5G15530.1
BCCP2
biotin carboxyl carrier protein 2
arTal_v1_Chr3_-_7259854_7259854 0.60 AT3G20760.1
AT3G20760
Nse4, component of Smc5/6 DNA repair complex
arTal_v1_Chr2_-_19685997_19686056 0.58 AT2G48130.3
AT2G48130.2
AT2G48130.6
AT2G48130.1
AT2G48130.5
AT2G48130.4
AT2G48130
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr4_+_10665294_10665294 0.56 AT4G19570.1
AT4G19570
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr4_-_6713512_6713512 0.56 AT4G10950.2
AT4G10950.1
AT4G10950
SGNH hydrolase-type esterase superfamily protein
arTal_v1_Chr1_-_7989217_7989217 0.56 AT1G22600.1
AT1G22600
Late embryogenesis abundant protein (LEA) family protein
arTal_v1_Chr2_-_15889220_15889258 0.55 AT2G37960.1
AT2G37960.2
AT2G37960
myosin-M heavy protein
arTal_v1_Chr1_+_6315636_6315636 0.55 AT1G18350.1
MKK7
MAP kinase kinase 7
arTal_v1_Chr3_-_16002163_16002163 0.54 AT3G44326.1
AT3G44326
F-box family protein
arTal_v1_Chr1_+_13560124_13560124 0.53 AT1G36185.1
AT1G36185

arTal_v1_Chr3_-_2966197_2966231 0.53 AT3G09660.1
AT3G09660.2
AT3G09660.3
MCM8
minichromosome maintenance 8
arTal_v1_Chr1_+_729830_729830 0.53 AT1G03070.1
AT1G03070.3
AT1G03070.2
AT1G03070
Bax inhibitor-1 family protein
arTal_v1_Chr5_-_16407930_16407930 0.53 AT5G40940.1
FLA20
putative fasciclin-like arabinogalactan protein 20
arTal_v1_Chr1_-_7902427_7902427 0.53 AT1G22380.1
UGT85A3
UDP-glucosyl transferase 85A3
arTal_v1_Chr1_+_26423874_26423874 0.52 AT1G70170.1
MMP
matrix metalloproteinase
arTal_v1_Chr4_-_12694656_12694656 0.49 AT4G24580.1
AT4G24580.2
REN1
Rho GTPase activation protein (RhoGAP) with PH domain-containing protein
arTal_v1_Chr3_+_22019553_22019553 0.48 AT3G59610.1
AT3G59610
F-box family protein / jacalin lectin family protein
arTal_v1_Chr5_+_1330437_1330437 0.48 AT5G04630.1
CYP77A9
cytochrome P450, family 77, subfamily A, polypeptide 9
arTal_v1_Chr3_-_19897955_19897955 0.48 AT3G53680.1
AT3G53680
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
arTal_v1_Chr4_-_507626_507626 0.47 AT4G01200.1
AT4G01200
Calcium-dependent lipid-binding (CaLB domain) family protein
arTal_v1_Chr4_-_12694428_12694428 0.47 AT4G24580.3
REN1
Rho GTPase activation protein (RhoGAP) with PH domain-containing protein
arTal_v1_Chr5_+_9300416_9300416 0.47 AT5G26730.1
AT5G26730
Fasciclin-like arabinogalactan family protein
arTal_v1_Chr5_-_489242_489242 0.47 AT5G02330.1
AT5G02330
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr1_-_8406266_8406266 0.46 AT1G23770.1
AT1G23770
F-box family protein
arTal_v1_Chr1_+_16240477_16240477 0.46 AT1G43150.1
AT1G43150

arTal_v1_Chr3_-_11395871_11395871 0.46 AT3G29580.1
AT3G29580
MATH domain/coiled-coil protein
arTal_v1_Chr5_-_4109784_4109784 0.45 AT5G12990.1
CLE40
CLAVATA3/ESR-RELATED 40
arTal_v1_Chr2_-_2534389_2534389 0.45 AT2G06410.1
AT2G06410

arTal_v1_Chr1_+_6623823_6623823 0.45 AT1G19190.1
AT1G19190
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_-_19897412_19897412 0.45 AT3G53680.2
AT3G53680
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
arTal_v1_Chr1_-_29284458_29284480 0.45 AT1G77860.1
AT1G77860.2
KOM
Rhomboid-related intramembrane serine protease family protein
arTal_v1_Chr5_+_6241134_6241134 0.45 AT5G18710.1
AT5G18710
DNAJ heat shock amino-terminal domain protein, putative (DUF3444)
arTal_v1_Chr5_-_23896702_23896702 0.45 AT5G59220.2
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
arTal_v1_Chr5_-_16563732_16563732 0.44 AT5G41380.1
AT5G41380
CCT motif family protein
arTal_v1_Chr4_-_13796111_13796111 0.44 AT4G27630.6
GTG2
GPCR-type G protein 2
arTal_v1_Chr2_-_10346829_10346829 0.44 AT2G24320.1
AT2G24320
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_+_10273480_10273480 0.44 AT4G18660.1
AT4G18660
delay of germination protein
arTal_v1_Chr5_-_17033800_17033800 0.44 AT5G42590.1
CYP71A16
cytochrome P450, family 71, subfamily A, polypeptide 16
arTal_v1_Chr5_-_23896939_23896939 0.44 AT5G59220.1
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
arTal_v1_Chr5_+_17489271_17489271 0.43 AT5G43530.1
AT5G43530
Helicase protein with RING/U-box domain-containing protein
arTal_v1_Chr3_-_2137280_2137350 0.43 AT3G06770.4
AT3G06770.3
AT3G06770
Pectin lyase-like superfamily protein
arTal_v1_Chr2_+_18791289_18791289 0.42 AT2G45610.1
AT2G45610
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_-_3950602_3950602 0.42 AT4G06700.1
AT4G06700

arTal_v1_Chr3_-_6623278_6623278 0.42 AT3G19160.1
IPT8
ATP/ADP isopentenyltransferase
arTal_v1_Chr3_-_10290934_10290934 0.42 AT3G27785.1
MYB118
myb domain protein 118
arTal_v1_Chr3_-_2137012_2137085 0.42 AT3G06770.1
AT3G06770.5
AT3G06770
Pectin lyase-like superfamily protein
arTal_v1_Chr1_+_11212958_11212958 0.41 AT1G31320.1
LBD4
LOB domain-containing protein 4
arTal_v1_Chr1_-_3444360_3444360 0.41 AT1G10470.1
ARR4
response regulator 4
arTal_v1_Chr5_+_21237021_21237056 0.41 AT5G52300.1
AT5G52300.2
LTI65
CAP160 protein
arTal_v1_Chr2_+_723565_723565 0.41 AT2G02630.1
AT2G02630
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr3_-_2137641_2137641 0.40 AT3G06770.2
AT3G06770
Pectin lyase-like superfamily protein
arTal_v1_Chr4_-_13048262_13048262 0.40 AT4G25540.1
MSH3
homolog of DNA mismatch repair protein MSH3
arTal_v1_Chr4_-_14592610_14592610 0.40 AT4G29800.1
PLP8
PATATIN-like protein 8
arTal_v1_Chr3_+_21884426_21884520 0.40 AT3G59190.2
AT3G59190.1
AT3G59190
F-box/RNI-like superfamily protein
arTal_v1_Chr5_-_25801302_25801302 0.40 AT5G64540.1
AT5G64540.3
AT5G64540.2
AT5G64540
mucin-like protein
arTal_v1_Chr3_-_15679850_15679850 0.40 AT3G43830.1
AT3G43830

arTal_v1_Chr4_-_13910995_13910995 0.40 AT4G27950.1
CRF4
cytokinin response factor 4
arTal_v1_Chr1_+_21950503_21950503 0.40 AT1G59725.1
AT1G59725
DNAJ heat shock family protein
arTal_v1_Chr1_+_9298670_9298670 0.40 AT1G26840.1
ORC6
origin recognition complex protein 6
arTal_v1_Chr1_-_6873358_6873358 0.40 AT1G19840.1
AT1G19840
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_-_22067233_22067233 0.39 AT1G59940.2
ARR3
response regulator 3
arTal_v1_Chr3_-_15837126_15837126 0.39 AT3G44080.1
AT3G44080
F-box family protein
arTal_v1_Chr3_+_3313953_3313953 0.39 AT3G10600.1
CAT7
cationic amino acid transporter 7
arTal_v1_Chr5_+_2016566_2016590 0.39 AT5G06590.2
AT5G06590.1
AT5G06590
hypothetical protein
arTal_v1_Chr1_-_22067076_22067076 0.39 AT1G59940.1
ARR3
response regulator 3
arTal_v1_Chr1_-_3443957_3443957 0.39 AT1G10470.3
AT1G10470.2
ARR4
response regulator 4
arTal_v1_Chr2_+_5741592_5741592 0.39 AT2G13790.1
SERK4
somatic embryogenesis receptor-like kinase 4
arTal_v1_Chr2_+_18875736_18875736 0.39 AT2G45870.3
AT2G45870.1
AT2G45870.2
AT2G45870
Bestrophin-like protein
arTal_v1_Chr1_-_8275350_8275350 0.39 AT1G23320.1
TAR1
tryptophan aminotransferase related 1
arTal_v1_Chr2_+_15758601_15758634 0.39 AT2G37560.2
AT2G37560.1
ORC2
origin recognition complex second largest subunit 2
arTal_v1_Chr1_-_6583601_6583601 0.38 AT1G19060.1
AT1G19060
hypothetical protein (DUF626)
arTal_v1_Chr1_+_11423906_11423990 0.38 AT1G31840.2
AT1G31840.1
AT1G31840
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_-_654480_654487 0.37 AT3G02920.3
AT3G02920.1
AT3G02920.2
RPA32B
Replication protein A, subunit RPA32
arTal_v1_Chr1_+_19025642_19025642 0.37 AT1G51320.1
AT1G51320
F-box and associated interaction domains-containing protein
arTal_v1_Chr3_+_3314432_3314432 0.37 AT3G10600.2
CAT7
cationic amino acid transporter 7
arTal_v1_Chr3_+_12019426_12019426 0.37 AT3G30405.1
AT3G30405

arTal_v1_Chr5_-_7820760_7820760 0.37 AT5G23220.1
NIC3
nicotinamidase 3
arTal_v1_Chr5_+_6667664_6667664 0.37 AT5G19720.1
AT5G19720
Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein
arTal_v1_Chr5_+_6249727_6249727 0.37 AT5G18740.1
AT5G18740
hypothetical protein (DUF3444)
arTal_v1_Chr5_+_13726743_13726743 0.37 AT5G35550.2
AT5G35550.1
TT2
Duplicated homeodomain-like superfamily protein
arTal_v1_Chr4_-_13601586_13601586 0.37 AT4G27110.1
COBL11
COBRA-like protein 11 precursor
arTal_v1_Chr1_+_22258939_22258939 0.37 AT1G60410.1
AT1G60410
F-box family protein
arTal_v1_Chr5_-_974178_974326 0.37 AT5G03720.2
AT5G03720.1
HSFA3
heat shock transcription factor A3
arTal_v1_Chr4_-_13662672_13662672 0.37 AT4G27270.4
AT4G27270
Quinone reductase family protein
arTal_v1_Chr5_+_17531302_17531302 0.36 AT5G43640.1
AT5G43640
Ribosomal protein S19 family protein
arTal_v1_Chr2_-_3012333_3012333 0.36 AT2G07240.1
AT2G07240
cysteine-type peptidase
arTal_v1_Chr3_+_12637092_12637092 0.36 AT3G30859.1
AT3G30859

arTal_v1_Chr4_-_14592825_14592825 0.36 AT4G29800.2
PLP8
PATATIN-like protein 8
arTal_v1_Chr3_+_19513937_19513996 0.36 AT3G52630.2
AT3G52630.1
AT3G52630
Nucleic acid-binding, OB-fold-like protein
arTal_v1_Chr3_+_4927682_4927682 0.36 AT3G14670.3
AT3G14670
hypothetical protein
arTal_v1_Chr2_+_16142897_16142897 0.36 AT2G38590.1
AT2G38590
F-box and associated interaction domains-containing protein
arTal_v1_Chr5_+_6244275_6244275 0.36 AT5G18720.2
AT5G18720
DNAJ heat shock amino-terminal domain protein, putative (DUF3444)
arTal_v1_Chr1_+_2263037_2263037 0.35 AT1G07370.1
PCNA1
proliferating cellular nuclear antigen 1
arTal_v1_Chr4_-_13663371_13663371 0.35 AT4G27270.2
AT4G27270.1
AT4G27270.3
AT4G27270
Quinone reductase family protein
arTal_v1_Chr1_+_18977176_18977176 0.35 AT1G51190.1
PLT2
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr4_+_6169600_6169600 0.35 AT4G09795.1
LCR13
low-molecular-weight cysteine-rich 13
arTal_v1_Chr1_-_25100625_25100625 0.35 AT1G67130.1
AT1G67130
F-box family protein
arTal_v1_Chr2_-_2657265_2657265 0.35 AT2G06660.1
AT2G06660

arTal_v1_Chr2_+_16188047_16188047 0.35 AT2G38720.1
MAP65-5
microtubule-associated protein 65-5
arTal_v1_Chr3_+_4927847_4927847 0.35 AT3G14670.1
AT3G14670.2
AT3G14670
hypothetical protein
arTal_v1_Chr1_+_9107519_9107519 0.34 AT1G26330.2
AT1G26330.1
AT1G26330
DNA binding protein
arTal_v1_Chr5_+_6243982_6244005 0.34 AT5G18720.3
AT5G18720.1
AT5G18720
DNAJ heat shock amino-terminal domain protein, putative (DUF3444)
arTal_v1_Chr1_-_1330402_1330402 0.34 AT1G04730.3
CTF18
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr4_+_923122_923122 0.34 AT4G02090.1
AT4G02090
multidrug resistance protein ABC transporter family protein
arTal_v1_Chr1_-_25978706_25978706 0.34 AT1G69090.1
AT1G69090
F-box protein (DUF295)
arTal_v1_Chr5_-_18482643_18482643 0.34 AT5G45580.1
AT5G45580
Homeodomain-like superfamily protein
arTal_v1_Chr4_-_13797147_13797305 0.34 AT4G27630.4
AT4G27630.7
AT4G27630.3
AT4G27630.1
AT4G27630.5
AT4G27630.2
GTG2
GPCR-type G protein 2
arTal_v1_Chr3_+_1698297_1698297 0.33 AT3G05740.2
RECQI1
RECQ helicase l1
arTal_v1_Chr3_-_18834834_18834834 0.33 AT3G50685.1
AT3G50685
anti-muellerian hormone type-2 receptor
arTal_v1_Chr5_-_5502856_5502856 0.33 AT5G16740.1
AT5G16740
Transmembrane amino acid transporter family protein
arTal_v1_Chr2_+_14726800_14726800 0.33 AT2G34910.1
AT2G34910
root hair specific protein
arTal_v1_Chr5_+_11285138_11285138 0.33 AT5G29624.1
AT5G29624
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr3_+_11409602_11409602 0.33 AT3G29610.1
AT3G29610

arTal_v1_Chr4_+_11758578_11758578 0.33 AT4G22217.1
AT4G22217
defensin-like protein
arTal_v1_Chr5_+_9925219_9925219 0.32 AT5G27905.1
AT5G27905

arTal_v1_Chr5_+_8929177_8929177 0.32 AT5G25615.1
AT5G25615

arTal_v1_Chr5_-_7081789_7081789 0.32 AT5G20870.1
AT5G20870
O-Glycosyl hydrolases family 17 protein
arTal_v1_Chr5_-_1695557_1695557 0.32 AT5G05660.1
NFXL2
NF-X1-type zinc finger protein NFXL2
arTal_v1_Chr2_-_18165878_18165878 0.32 AT2G43865.1
AT2G43865
hypothetical protein
arTal_v1_Chr3_-_1438539_1438539 0.32 AT3G05140.2
RBK2
ROP binding protein kinases 2
arTal_v1_Chr3_-_9319660_9319660 0.32 AT3G25620.2
AT3G25620.1
ABCG21
ABC-2 type transporter family protein
arTal_v1_Chr1_-_17407592_17407592 0.32 AT1G47465.1
AT1G47465

arTal_v1_Chr4_-_13406109_13406259 0.32 AT4G26555.2
AT4G26555.3
AT4G26555.1
AT4G26555
FKBP-like peptidyl-prolyl cis-trans isomerase family protein
arTal_v1_Chr1_-_1437763_1437763 0.32 AT1G05020.1
AT1G05020
ENTH/ANTH/VHS superfamily protein
arTal_v1_Chr4_+_5811115_5811115 0.32 AT4G09100.1
AT4G09100
RING/U-box superfamily protein
arTal_v1_Chr1_-_19580977_19580977 0.32 AT1G52565.1
AT1G52565
cytochrome P450 family protein
arTal_v1_Chr2_-_226234_226234 0.32 AT2G01500.1
PFS2
Homeodomain-like superfamily protein
arTal_v1_Chr3_-_1438341_1438341 0.32 AT3G05140.1
RBK2
ROP binding protein kinases 2
arTal_v1_Chr3_-_6842856_6842856 0.32 AT3G19690.1
AT3G19690
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
arTal_v1_Chr1_+_4095246_4095246 0.31 AT1G12100.1
AT1G12100
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_+_9279309_9279309 0.31 AT5G26673.1
AT5G26673
Putative membrane lipoprotein
arTal_v1_Chr1_-_29249528_29249528 0.31 AT1G77780.1
AT1G77780
Glycosyl hydrolase superfamily protein
arTal_v1_Chr2_-_17546559_17546559 0.31 AT2G42050.1
AT2G42050

arTal_v1_Chr4_+_15024444_15024444 0.31 AT4G30860.1
SDG4
SET domain group 4
arTal_v1_Chr2_-_10347053_10347053 0.31 AT2G24320.2
AT2G24320
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr2_+_6166936_6166936 0.31 AT2G14500.1
AT2G14500
F-box family protein
arTal_v1_Chr1_+_15637605_15637605 0.31 AT1G41855.1
AT1G41855

arTal_v1_Chr3_+_1698079_1698079 0.31 AT3G05740.1
RECQI1
RECQ helicase l1
arTal_v1_Chr2_-_4448957_4448957 0.31 AT2G11190.1
AT2G11190

arTal_v1_Chr3_-_14000072_14000072 0.31 AT3G33172.1
AT3G33172

arTal_v1_Chr2_-_8371108_8371108 0.31 AT2G19320.1
AT2G19320
hypothetical protein
arTal_v1_Chr2_+_873506_873506 0.31 AT2G02990.1
RNS1
ribonuclease 1
arTal_v1_Chr4_-_17033972_17033993 0.31 AT4G35985.3
AT4G35985.2
AT4G35985
Senescence/dehydration-associated protein-like protein
arTal_v1_Chr1_+_4105223_4105223 0.31 AT1G12110.1
NRT1.1
nitrate transporter 1.1
arTal_v1_Chr5_-_5259924_5259924 0.31 AT5G16100.2
AT5G16100
RWP-RK domain protein
arTal_v1_Chr4_+_2076832_2076832 0.31 AT4G04293.1
AT4G04293

arTal_v1_Chr2_+_11318771_11318771 0.31 AT2G26610.1
AT2G26610
Transducin family protein / WD-40 repeat family protein
arTal_v1_Chr4_-_12276322_12276322 0.30 AT4G23520.1
AT4G23520
Cysteine proteinases superfamily protein
arTal_v1_Chr5_-_4082083_4082083 0.30 AT5G12920.5
AT5G12920.4
AT5G12920
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_+_21766847_21766847 0.30 AT1G58643.2
AT1G58643
Inositol-pentakisphosphate 2-kinase family protein
arTal_v1_Chr2_-_10132779_10132779 0.30 AT2G23800.1
GGPS2
geranylgeranyl pyrophosphate synthase 2
arTal_v1_Chr3_+_18169079_18169079 0.30 AT3G49020.1
AT3G49020
FBD, F-box and Leucine Rich Repeat domains containing protein
arTal_v1_Chr2_-_2694916_2694916 0.30 AT2G06760.1
AT2G06760

arTal_v1_Chr4_-_17034244_17034244 0.30 AT4G35985.1
AT4G35985
Senescence/dehydration-associated protein-like protein
arTal_v1_Chr5_-_8593601_8593601 0.29 AT5G24940.1
AT5G24940
Protein phosphatase 2C family protein
arTal_v1_Chr5_+_619865_619865 0.29 AT5G02750.1
SGR9
RING/U-box superfamily protein
arTal_v1_Chr1_+_1741204_1741204 0.29 AT1G05800.1
DGL
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_-_18373884_18373884 0.29 AT1G49630.4
PREP2
presequence protease 2
arTal_v1_Chr4_+_17679353_17679353 0.29 AT4G37630.2
CYCD5%3B1
cyclin d5;1
arTal_v1_Chr3_-_10231567_10231567 0.29 AT3G27630.1
AT3G27630
cyclin-dependent kinase inhibitor SMR3-like protein
arTal_v1_Chr5_-_25661007_25661007 0.29 AT5G64120.1
AT5G64120
Peroxidase superfamily protein
arTal_v1_Chr1_-_5338326_5338326 0.29 AT1G15520.1
AT1G15520.2
ABCG40
pleiotropic drug resistance 12
arTal_v1_Chr4_+_10670589_10670610 0.29 AT4G19590.2
AT4G19590.3
AT4G19590
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr1_+_20793720_20793720 0.29 AT1G55640.1
PRA1.G1
prenylated RAB acceptor 1.G1
arTal_v1_Chr4_-_17656557_17656557 0.29 AT4G37570.1
AT4G37570

arTal_v1_Chr5_-_7189696_7189696 0.29 AT5G21140.1
emb1379
embryo defective 1379
arTal_v1_Chr4_-_3346456_3346456 0.29 AT4G06530.1
AT4G06530

arTal_v1_Chr4_-_10319736_10319736 0.29 AT4G18790.1
NRAMP5
NRAMP metal ion transporter family protein
arTal_v1_Chr1_-_16109446_16109446 0.28 AT1G42852.1
AT1G42852

arTal_v1_Chr1_-_13164512_13164512 0.28 AT1G35630.1
AT1G35630
Protease-associated (PA) RING/U-box zinc finger family protein
arTal_v1_Chr3_-_16726116_16726116 0.28 AT3G45570.1
AT3G45570
RING/U-box protein with C6HC-type zinc finger domain-containing protein
arTal_v1_Chr5_+_14518008_14518117 0.28 AT5G36870.2
AT5G36870.3
AT5G36870.4
GSL09
glucan synthase-like 9
arTal_v1_Chr5_-_497372_497372 0.28 AT5G02350.1
AT5G02350
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr3_+_12139438_12139438 0.28 AT3G30530.1
bZIP42
basic leucine-zipper 42
arTal_v1_Chr3_+_12779538_12779538 0.28 AT3G31406.1
AT3G31406

arTal_v1_Chr1_-_7102915_7102915 0.28 AT1G20500.1
AT1G20500
AMP-dependent synthetase and ligase family protein
arTal_v1_Chr4_+_10671199_10671199 0.28 AT4G19590.1
AT4G19590
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr1_+_18302711_18302711 0.28 AT1G49440.1
AT1G49440

arTal_v1_Chr3_-_13049106_13049106 0.28 AT3G32040.1
AT3G32040
Terpenoid synthases superfamily protein
arTal_v1_Chr1_-_5962481_5962481 0.28 AT1G17400.1
AT1G17400.2
AT1G17400.3
AT1G17400
hypothetical protein
arTal_v1_Chr3_+_15728176_15728176 0.28 AT3G43870.1
AT3G43870
hypothetical protein
arTal_v1_Chr5_-_21207697_21207716 0.28 AT5G52220.1
AT5G52220.2
AT5G52220
chromosome transmission fidelity-like protein
arTal_v1_Chr5_-_5259719_5259719 0.27 AT5G16100.1
AT5G16100
RWP-RK domain protein
arTal_v1_Chr4_-_5574725_5574725 0.27 AT4G08720.1
AT4G08720

arTal_v1_Chr3_-_1719608_1719608 0.27 AT3G05780.1
LON3
lon protease 3
arTal_v1_Chr3_+_11231712_11231712 0.27 AT3G29265.1
AT3G29265

arTal_v1_Chr5_-_18483008_18483044 0.27 AT5G45580.2
AT5G45580.3
AT5G45580
Homeodomain-like superfamily protein
arTal_v1_Chr3_-_17793768_17793768 0.27 AT3G48185.1
AT3G48185
transmembrane protein
arTal_v1_Chr2_-_6581815_6581815 0.27 AT2G15160.1
AT2G15160

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G14960

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 GO:0098740 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.2 0.5 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 0.4 GO:0055089 fatty acid homeostasis(GO:0055089)
0.1 0.8 GO:0006272 leading strand elongation(GO:0006272)
0.1 0.4 GO:0006425 glutaminyl-tRNA aminoacylation(GO:0006425)
0.1 0.6 GO:0043570 meiotic mismatch repair(GO:0000710) maintenance of DNA repeat elements(GO:0043570)
0.1 0.3 GO:0015692 lead ion transport(GO:0015692) abscisic acid transport(GO:0080168)
0.1 1.0 GO:0010161 red light signaling pathway(GO:0010161)
0.1 0.3 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.1 0.3 GO:0033386 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.1 0.8 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 0.3 GO:0048445 carpel morphogenesis(GO:0048445)
0.0 0.4 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.2 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.0 0.5 GO:0007143 female meiotic division(GO:0007143)
0.0 0.2 GO:0043157 response to cation stress(GO:0043157)
0.0 0.6 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.0 0.1 GO:2000653 guard cell fate commitment(GO:0010377) regulation of G1/S transition of mitotic cell cycle(GO:2000045) regulation of genetic imprinting(GO:2000653)
0.0 0.1 GO:0009107 lipoate biosynthetic process(GO:0009107)
0.0 0.1 GO:1904062 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.0 0.1 GO:0034486 vacuolar transmembrane transport(GO:0034486)
0.0 0.1 GO:0009265 deoxyribonucleoside triphosphate catabolic process(GO:0009204) pyrimidine deoxyribonucleoside triphosphate metabolic process(GO:0009211) pyrimidine deoxyribonucleotide metabolic process(GO:0009219) pyrimidine deoxyribonucleotide biosynthetic process(GO:0009221) 2'-deoxyribonucleotide biosynthetic process(GO:0009265) deoxyribose phosphate biosynthetic process(GO:0046385) deoxyribose phosphate catabolic process(GO:0046386)
0.0 0.3 GO:0010310 regulation of hydrogen peroxide metabolic process(GO:0010310)
0.0 0.8 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.0 0.3 GO:0080183 response to photooxidative stress(GO:0080183)
0.0 0.5 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.4 GO:0006301 postreplication repair(GO:0006301)
0.0 0.1 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.0 0.4 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.0 0.3 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 1.0 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.1 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.0 0.3 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.6 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.2 GO:0051955 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.0 0.6 GO:0071462 cellular response to water deprivation(GO:0042631) cellular response to water stimulus(GO:0071462)
0.0 0.2 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0 0.4 GO:0010215 cellulose microfibril organization(GO:0010215)
0.0 0.2 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.1 GO:0010351 lithium ion transport(GO:0010351)
0.0 0.3 GO:0046785 microtubule polymerization(GO:0046785)
0.0 0.6 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.4 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.0 0.0 GO:0046521 sphingoid catabolic process(GO:0046521)
0.0 0.1 GO:0015893 drug transport(GO:0015893)
0.0 0.1 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.2 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.0 0.8 GO:0010114 response to red light(GO:0010114)
0.0 0.8 GO:0006865 amino acid transport(GO:0006865)
0.0 0.2 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.0 0.1 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.2 GO:0009098 leucine biosynthetic process(GO:0009098)
0.0 0.5 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 0.3 GO:0099518 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.4 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.0 GO:0045604 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.0 0.4 GO:0007062 sister chromatid cohesion(GO:0007062)
0.0 0.4 GO:0060548 negative regulation of cell death(GO:0060548)
0.0 0.6 GO:0002239 response to oomycetes(GO:0002239)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0070382 exocytic vesicle(GO:0070382)
0.2 0.7 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.2 0.6 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.1 0.8 GO:0000808 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.1 0.3 GO:0009501 amyloplast(GO:0009501)
0.1 0.3 GO:0030896 checkpoint clamp complex(GO:0030896)
0.1 0.2 GO:0032301 MutSalpha complex(GO:0032301)
0.1 0.3 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 0.9 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.4 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.3 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 0.2 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 0.6 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.0 0.5 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.5 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.5 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.3 GO:0016459 myosin complex(GO:0016459)
0.0 0.2 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 0.3 GO:0009574 preprophase band(GO:0009574)
0.0 0.0 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.0 0.1 GO:0000813 ESCRT I complex(GO:0000813)
0.0 0.2 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 0.1 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.0 0.6 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.1 GO:0035861 site of double-strand break(GO:0035861)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.2 0.6 GO:0009374 biotin binding(GO:0009374)
0.1 0.6 GO:0032135 DNA insertion or deletion binding(GO:0032135)
0.1 0.6 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.1 0.8 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.4 GO:0008936 nicotinamidase activity(GO:0008936)
0.1 0.4 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.1 1.0 GO:0017048 Rho GTPase binding(GO:0017048)
0.1 0.4 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.1 0.7 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 0.3 GO:0052740 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.1 0.2 GO:0015119 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.1 0.3 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.1 0.2 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.1 0.4 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.1 GO:0008517 folic acid transporter activity(GO:0008517)
0.0 0.5 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.2 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.0 0.3 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 0.2 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.0 0.5 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.1 GO:0016992 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.0 1.6 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.8 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.2 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.0 0.4 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.3 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.0 0.5 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.5 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 0.1 GO:0017116 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.2 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.0 0.5 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.1 GO:0005355 glucose transmembrane transporter activity(GO:0005355)
0.0 0.4 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.0 0.1 GO:0015116 sulfate transmembrane transporter activity(GO:0015116)
0.0 0.9 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.2 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 0.1 GO:0042084 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.0 0.1 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 1.3 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 1.4 GO:0051020 GTPase binding(GO:0051020)
0.0 0.0 GO:0032131 alkylated DNA binding(GO:0032131)
0.0 0.1 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.0 0.2 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.1 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.3 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.1 GO:0031078 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.1 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.0 0.3 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.4 GO:0051087 chaperone binding(GO:0051087)
0.0 0.1 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 0.3 GO:0008810 cellulase activity(GO:0008810)
0.0 0.2 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 1.2 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.4 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 0.5 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.1 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.0 0.2 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.0 0.1 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.0 0.2 PID FANCONI PATHWAY Fanconi anemia pathway
0.0 0.1 PID EPHA2 FWD PATHWAY EPHA2 forward signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.5 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.1 0.2 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.0 0.2 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.0 0.1 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.0 0.1 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks