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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G15830

Z-value: 0.93

Transcription factors associated with AT5G15830

Gene Symbol Gene ID Gene Info
AT5G15830
AT5G15830 basic leucine-zipper 3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
bZIP3arTal_v1_Chr5_+_5168194_51681940.679.0e-03Click!

Activity profile of AT5G15830 motif

Sorted Z-values of AT5G15830 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr2_-_17712290_17712330 2.57 AT2G42540.2
AT2G42540.4
AT2G42540.1
AT2G42540.3
COR15A
cold-regulated 15a
arTal_v1_Chr1_+_28975255_28975255 1.50 AT1G77120.1
ADH1
alcohol dehydrogenase 1
arTal_v1_Chr1_-_10289666_10289666 1.46 AT1G29395.1
COR413IM1
COLD REGULATED 314 INNER MEMBRANE 1
arTal_v1_Chr5_-_17199793_17199910 1.34 AT5G42900.1
AT5G42900.3
AT5G42900.2
COR27
cold regulated protein 27
arTal_v1_Chr2_-_19370478_19370478 1.34 AT2G47180.1
GolS1
galactinol synthase 1
arTal_v1_Chr2_-_6493512_6493512 1.34 AT2G15020.1
AT2G15020
hypothetical protein
arTal_v1_Chr3_-_489467_489467 1.31 AT3G02380.1
COL2
CONSTANS-like 2
arTal_v1_Chr5_-_22712441_22712441 1.31 AT5G56080.1
NAS2
nicotianamine synthase 2
arTal_v1_Chr3_+_18940643_18940643 1.28 AT3G50970.1
LTI30
dehydrin family protein
arTal_v1_Chr1_+_3019639_3019639 1.22 AT1G09350.1
GolS3
galactinol synthase 3
arTal_v1_Chr1_+_6763765_6763915 1.21 AT1G19530.1
AT1G19530.2
AT1G19530
DNA polymerase epsilon catalytic subunit A
arTal_v1_Chr1_+_209208_209208 1.19 AT1G01580.1
FRO2
ferric reduction oxidase 2
arTal_v1_Chr1_+_208995_208995 1.18 AT1G01580.2
FRO2
ferric reduction oxidase 2
arTal_v1_Chr5_+_17987591_17987591 1.13 AT5G44590.2
AT5G44590.1
AT5G44590
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_+_3020221_3020221 1.10 AT1G09350.2
GolS3
galactinol synthase 3
arTal_v1_Chr5_-_5692920_5692992 1.09 AT5G17300.2
AT5G17300.1
RVE1
Homeodomain-like superfamily protein
arTal_v1_Chr5_+_5206156_5206156 1.09 AT5G15950.2
AT5G15950
Adenosylmethionine decarboxylase family protein
arTal_v1_Chr2_+_1993038_1993084 1.09 AT2G05440.2
AT2G05440.9
AT2G05440.5
AT2G05440.1
AT2G05440.6
AT2G05440.3
AT2G05440.4
AT2G05440.8
AT2G05440.7
GRP9
GLYCINE RICH PROTEIN 9
arTal_v1_Chr5_+_17526660_17526729 1.09 AT5G43630.2
AT5G43630.1
AT5G43630.3
AT5G43630.4
TZP
zinc knuckle (CCHC-type) family protein
arTal_v1_Chr5_-_5177897_5177897 1.08 AT5G15850.1
COL1
CONSTANS-like 1
arTal_v1_Chr1_+_27778984_27778984 1.08 AT1G73870.1
BBX16
B-box type zinc finger protein with CCT domain-containing protein
arTal_v1_Chr2_+_12666935_12666979 1.07 AT2G29630.3
AT2G29630.2
AT2G29630.1
THIC
thiaminC
arTal_v1_Chr5_+_5205869_5205869 1.07 AT5G15950.1
AT5G15950
Adenosylmethionine decarboxylase family protein
arTal_v1_Chr4_-_18472048_18472048 1.05 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
arTal_v1_Chr1_+_23740493_23740562 1.04 AT1G63980.1
AT1G63980.2
AT1G63980
D111/G-patch domain-containing protein
arTal_v1_Chr3_+_4104463_4104463 1.04 AT3G12900.1
AT3G12900
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr1_-_9275193_9275193 1.02 AT1G26790.1
AT1G26790
Dof-type zinc finger DNA-binding family protein
arTal_v1_Chr4_+_15451988_15451988 1.02 AT4G31940.1
CYP82C4
cytochrome P450, family 82, subfamily C, polypeptide 4
arTal_v1_Chr1_-_37757_37871 1.00 AT1G01060.3
AT1G01060.2
AT1G01060.4
AT1G01060.1
AT1G01060.6
AT1G01060.7
AT1G01060.5
LHY
Homeodomain-like superfamily protein
arTal_v1_Chr2_+_12667901_12667901 0.99 AT2G29630.4
THIC
thiaminC
arTal_v1_Chr1_-_29459493_29459493 0.97 AT1G78290.2
AT1G78290.3
SNRK2-8
Protein kinase superfamily protein
arTal_v1_Chr5_+_15878698_15878726 0.97 AT5G39660.1
AT5G39660.3
AT5G39660.2
CDF2
cycling DOF factor 2
arTal_v1_Chr3_+_7959753_7959753 0.96 AT3G22440.1
AT3G22440
FRIGIDA-like protein
arTal_v1_Chr3_-_9640918_9640918 0.95 AT3G26300.1
CYP71B34
cytochrome P450, family 71, subfamily B, polypeptide 34
arTal_v1_Chr2_-_17202848_17202848 0.93 AT2G41250.1
AT2G41250
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr5_-_22115539_22115539 0.93 AT5G54470.1
BBX29
B-box type zinc finger family protein
arTal_v1_Chr5_+_4776733_4776733 0.93 AT5G14780.1
AT5G14780.3
AT5G14780.2
FDH
formate dehydrogenase
arTal_v1_Chr2_+_19232607_19232649 0.93 AT2G46790.3
AT2G46790.4
AT2G46790.1
AT2G46790.2
AT2G46790.5
PRR9
pseudo-response regulator 9
arTal_v1_Chr5_+_18444607_18444607 0.93 AT5G45510.2
AT5G45510.1
AT5G45510
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr3_-_17306633_17306633 0.91 AT3G46970.1
PHS2
alpha-glucan phosphorylase 2
arTal_v1_Chr3_-_23195917_23195917 0.90 AT3G62700.1
ABCC14
multidrug resistance-associated protein 10
arTal_v1_Chr1_+_17847042_17847042 0.90 AT1G48300.1
DGAT3
diacylglycerol acyltransferase
arTal_v1_Chr2_+_17057388_17057388 0.90 AT2G40880.1
CYSA
cystatin A
arTal_v1_Chr4_+_17639_17784 0.90 AT4G00050.1
AT4G00050.3
AT4G00050.2
UNE10
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr1_-_5765798_5765798 0.88 AT1G16850.1
AT1G16850
transmembrane protein
arTal_v1_Chr3_+_22935510_22935510 0.88 AT3G61930.1
AT3G61930
hypothetical protein
arTal_v1_Chr4_-_12745352_12745352 0.87 AT4G24700.1
AT4G24700
hypothetical protein
arTal_v1_Chr3_-_3238267_3238267 0.87 AT3G10410.1
SCPL49
SERINE CARBOXYPEPTIDASE-LIKE 49
arTal_v1_Chr3_+_16818347_16818347 0.87 AT3G45780.2
PHOT1
phototropin 1
arTal_v1_Chr1_-_3756998_3756998 0.86 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
arTal_v1_Chr1_-_22317070_22317070 0.85 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
arTal_v1_Chr5_-_14753088_14753088 0.85 AT5G37260.1
RVE2
Homeodomain-like superfamily protein
arTal_v1_Chr5_-_25920254_25920254 0.84 AT5G64840.1
ABCF5
general control non-repressible 5
arTal_v1_Chr3_+_16816721_16816721 0.84 AT3G45780.1
PHOT1
phototropin 1
arTal_v1_Chr5_-_19807853_19807853 0.83 AT5G48850.1
ATSDI1
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_+_26122080_26122080 0.83 AT1G69490.1
NAP
NAC-like, activated by AP3/PI
arTal_v1_Chr5_-_1459039_1459039 0.83 AT5G04950.1
NAS1
nicotianamine synthase 1
arTal_v1_Chr3_+_19265141_19265141 0.83 AT3G51910.1
HSFA7A
heat shock transcription factor A7A
arTal_v1_Chr3_+_19845097_19845172 0.83 AT3G53530.2
AT3G53530.1
NAKR3
Chloroplast-targeted copper chaperone protein
arTal_v1_Chr3_-_4974521_4974534 0.82 AT3G14810.1
AT3G14810.2
MSL5
mechanosensitive channel of small conductance-like 5
arTal_v1_Chr2_+_18346306_18346306 0.82 AT2G44460.1
BGLU28
beta glucosidase 28
arTal_v1_Chr2_+_13381767_13381767 0.82 AT2G31380.1
STH
salt tolerance homologue
arTal_v1_Chr1_-_26163715_26163715 0.82 AT1G69570.1
AT1G69570
Dof-type zinc finger DNA-binding family protein
arTal_v1_Chr1_+_29759030_29759158 0.81 AT1G79110.2
AT1G79110.3
AT1G79110.1
BRG2
zinc ion binding protein
arTal_v1_Chr2_-_12343443_12343443 0.80 AT2G28780.1
AT2G28780
P-hydroxybenzoic acid efflux pump subunit
arTal_v1_Chr2_+_7845923_7845999 0.80 AT2G18050.2
AT2G18050.1
HIS1-3
histone H1-3
arTal_v1_Chr2_+_18347765_18347765 0.80 AT2G44460.2
BGLU28
beta glucosidase 28
arTal_v1_Chr3_+_5243432_5243432 0.80 AT3G15510.1
NAC2
NAC domain containing protein 2
arTal_v1_Chr2_+_7316789_7316889 0.80 AT2G16890.3
AT2G16890.2
AT2G16890.1
AT2G16890.4
AT2G16890
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr3_+_22635803_22635816 0.80 AT3G61160.3
AT3G61160.6
AT3G61160.5
AT3G61160.4
AT3G61160.2
AT3G61160.1
AT3G61160
Protein kinase superfamily protein
arTal_v1_Chr5_+_5211719_5211719 0.80 AT5G15970.1
KIN2
stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)
arTal_v1_Chr3_+_5705541_5705541 0.80 AT3G16770.1
EBP
ethylene-responsive element binding protein
arTal_v1_Chr4_-_12345652_12345652 0.79 AT4G23700.2
CHX17
cation/H+ exchanger 17
arTal_v1_Chr5_-_10070899_10070899 0.79 AT5G28060.1
AT5G28060
Ribosomal protein S24e family protein
arTal_v1_Chr5_-_1063425_1063425 0.79 AT5G03940.1
CPSRP54
chloroplast signal recognition particle 54 kDa subunit
arTal_v1_Chr3_-_20178982_20179070 0.78 AT3G54500.1
AT3G54500.4
AT3G54500.3
AT3G54500.8
AT3G54500.2
AT3G54500.5
AT3G54500.7
AT3G54500.6
AT3G54500
agglutinin-like protein
arTal_v1_Chr2_-_17379059_17379059 0.78 AT2G41680.1
NTRC
NADPH-dependent thioredoxin reductase C
arTal_v1_Chr4_-_12346051_12346051 0.77 AT4G23700.1
CHX17
cation/H+ exchanger 17
arTal_v1_Chr5_-_10348234_10348234 0.77 AT5G28400.1
AT5G28400
embryo defective protein
arTal_v1_Chr4_+_13725546_13725546 0.77 AT4G27440.2
AT4G27440.1
PORB
protochlorophyllide oxidoreductase B
arTal_v1_Chr3_-_22915393_22915393 0.77 AT3G61890.1
HB-12
homeobox 12
arTal_v1_Chr3_+_4937172_4937317 0.77 AT3G14690.2
AT3G14690.1
CYP72A15
cytochrome P450, family 72, subfamily A, polypeptide 15
arTal_v1_Chr1_+_25016402_25016402 0.76 AT1G67030.1
ZFP6
zinc finger protein 6
arTal_v1_Chr1_+_4662698_4662752 0.75 AT1G13609.1
AT1G13609.2
AT1G13609
Defensin-like (DEFL) family protein
arTal_v1_Chr2_-_17065813_17065813 0.75 AT2G40900.1
UMAMIT11
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr5_+_25948954_25948954 0.75 AT5G64940.1
AT5G64940.2
ATH13
ABC2 homolog 13
arTal_v1_Chr4_-_9583290_9583290 0.75 AT4G17030.1
EXLB1
expansin-like B1
arTal_v1_Chr4_+_10861382_10861386 0.74 AT4G20070.1
AT4G20070.2
AAH
allantoate amidohydrolase
arTal_v1_Chr3_-_10599042_10599042 0.74 AT3G28345.1
ABCB15
ABC transporter family protein
arTal_v1_Chr1_-_10475969_10475969 0.74 AT1G29920.1
CAB2
chlorophyll A/B-binding protein 2
arTal_v1_Chr5_+_22515391_22515440 0.74 AT5G55580.1
AT5G55580.3
AT5G55580.2
AT5G55580
Mitochondrial transcription termination factor family protein
arTal_v1_Chr3_-_17506124_17506124 0.74 AT3G47500.1
CDF3
cycling DOF factor 3
arTal_v1_Chr3_+_5720941_5721030 0.73 AT3G16800.5
AT3G16800.4
AT3G16800.2
AT3G16800.6
AT3G16800.1
AT3G16800
Protein phosphatase 2C family protein
arTal_v1_Chr5_-_14238026_14238072 0.72 AT5G36170.4
AT5G36170.2
AT5G36170.3
AT5G36170.1
HCF109
high chlorophyll fluorescent 109
arTal_v1_Chr3_-_8085669_8085669 0.72 AT3G22840.1
ELIP1
Chlorophyll A-B binding family protein
arTal_v1_Chr1_+_99865_99872 0.71 AT1G01240.4
AT1G01240.2
AT1G01240.1
AT1G01240.3
AT1G01240.5
AT1G01240
transmembrane protein
arTal_v1_Chr1_-_29716255_29716255 0.71 AT1G78995.1
AT1G78995
hypothetical protein
arTal_v1_Chr4_-_843531_843531 0.71 AT4G01940.1
NFU1
NFU domain protein 1
arTal_v1_Chr3_+_2465235_2465235 0.71 AT3G07720.1
AT3G07720
Galactose oxidase/kelch repeat superfamily protein
arTal_v1_Chr2_-_19211021_19211021 0.71 AT2G46750.1
GulLO2
D-arabinono-1,4-lactone oxidase family protein
arTal_v1_Chr1_-_28194068_28194068 0.70 AT1G75100.1
JAC1
J-domain protein required for chloroplast accumulation response 1
arTal_v1_Chr3_+_3923969_3923969 0.70 AT3G12320.3
AT3G12320
hypothetical protein
arTal_v1_Chr4_+_9171280_9171280 0.70 AT4G16190.1
AT4G16190
Papain family cysteine protease
arTal_v1_Chr1_-_27498062_27498062 0.70 AT1G73120.1
AT1G73120
F-box/RNI superfamily protein
arTal_v1_Chr1_+_8117732_8117732 0.70 AT1G22930.2
AT1G22930
T-complex protein 11
arTal_v1_Chr5_+_8541713_8541751 0.70 AT5G24860.3
AT5G24860.1
FPF1
flowering promoting factor 1
arTal_v1_Chr2_+_10244745_10244745 0.70 AT2G24100.1
ASG1
ATP-dependent DNA helicase
arTal_v1_Chr1_+_18934299_18934299 0.69 AT1G51100.1
CRR41
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel protein
arTal_v1_Chr3_+_3942257_3942257 0.69 AT3G12390.1
AT3G12390
Nascent polypeptide-associated complex (NAC), alpha subunit family protein
arTal_v1_Chr1_-_4679594_4679594 0.69 AT1G13640.2
AT1G13640
Phosphatidylinositol 3- and 4-kinase family protein
arTal_v1_Chr5_+_17171807_17171807 0.69 AT5G42825.1
AT5G42825
hypothetical protein
arTal_v1_Chr1_-_756303_756303 0.69 AT1G03140.1
AT1G03140
splicing factor Prp18 family protein
arTal_v1_Chr5_-_7652714_7652714 0.68 AT5G22880.1
HTB2
histone B2
arTal_v1_Chr5_+_579744_579852 0.68 AT5G02580.1
AT5G02580.3
AT5G02580.2
AT5G02580
argininosuccinate lyase
arTal_v1_Chr1_+_22737475_22737475 0.68 AT1G61620.1
AT1G61620
phosphoinositide binding protein
arTal_v1_Chr2_-_6175064_6175095 0.68 AT2G14510.1
AT2G14510.2
AT2G14510
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr1_+_4688018_4688018 0.68 AT1G13670.1
AT1G13670
hypothetical protein
arTal_v1_Chr4_+_9780224_9780224 0.67 AT4G17560.1
AT4G17560
Ribosomal protein L19 family protein
arTal_v1_Chr1_-_16851224_16851271 0.67 AT1G44446.3
AT1G44446.2
AT1G44446.1
CH1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
arTal_v1_Chr4_-_7553332_7553375 0.67 AT4G12910.2
AT4G12910.1
scpl20
serine carboxypeptidase-like 20
arTal_v1_Chr3_+_5081780_5081908 0.67 AT3G15095.2
AT3G15095.1
AT3G15095.3
HCF243
Serine/Threonine-kinase pakA-like protein
arTal_v1_Chr1_-_16851010_16851010 0.67 AT1G44446.4
CH1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
arTal_v1_Chr2_+_1576694_1576694 0.67 AT2G04530.1
CPZ
Metallo-hydrolase/oxidoreductase superfamily protein
arTal_v1_Chr3_-_19662025_19662025 0.67 AT3G53020.1
STV1
Ribosomal protein L24e family protein
arTal_v1_Chr3_-_1624819_1624852 0.66 AT3G05600.2
AT3G05600.1
AT3G05600
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_+_16263805_16263805 0.66 AT1G43160.1
RAP2.6
related to AP2 6
arTal_v1_Chr3_-_14879792_14879792 0.66 AT3G42790.1
AL3
alfin-like 3
arTal_v1_Chr2_+_9879275_9879275 0.66 AT2G23200.1
AT2G23200
Protein kinase superfamily protein
arTal_v1_Chr1_+_29356346_29356382 0.66 AT1G78070.2
AT1G78070.3
AT1G78070
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr1_-_4679862_4679862 0.66 AT1G13640.1
AT1G13640
Phosphatidylinositol 3- and 4-kinase family protein
arTal_v1_Chr3_+_11810726_11810726 0.66 AT3G30180.1
BR6OX2
brassinosteroid-6-oxidase 2
arTal_v1_Chr5_-_4392429_4392429 0.66 AT5G13630.1
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
arTal_v1_Chr5_-_4392227_4392227 0.66 AT5G13630.2
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
arTal_v1_Chr3_-_18684346_18684377 0.66 AT3G50370.1
AT3G50370.2
AT3G50370
hypothetical protein
arTal_v1_Chr1_-_26800483_26800483 0.66 AT1G71040.1
LPR2
Cupredoxin superfamily protein
arTal_v1_Chr4_-_2481590_2481590 0.65 AT4G04890.2
PDF2
protodermal factor 2
arTal_v1_Chr5_-_24836933_24836933 0.65 AT5G61820.1
AT5G61820.2
AT5G61820
stress up-regulated Nod 19 protein
arTal_v1_Chr1_+_8117286_8117286 0.65 AT1G22930.1
AT1G22930
T-complex protein 11
arTal_v1_Chr4_-_9171064_9171064 0.65 AT4G16180.2
AT4G16180
transmembrane protein
arTal_v1_Chr4_-_17564763_17564763 0.65 AT4G37330.1
CYP81D4
cytochrome P450, family 81, subfamily D, polypeptide 4
arTal_v1_Chr1_+_19737405_19737405 0.65 AT1G52980.1
AtNug2
GTP-binding family protein
arTal_v1_Chr3_+_3923515_3923515 0.65 AT3G12320.1
AT3G12320
hypothetical protein
arTal_v1_Chr2_-_1149261_1149261 0.65 AT2G03750.1
AT2G03750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr3_+_8941066_8941066 0.64 AT3G24520.1
HSFC1
heat shock transcription factor C1
arTal_v1_Chr2_-_19166949_19166967 0.64 AT2G46680.2
AT2G46680.1
HB-7
homeobox 7
arTal_v1_Chr5_+_105268_105282 0.64 AT5G01260.3
AT5G01260.2
AT5G01260.1
AT5G01260
Carbohydrate-binding-like fold
arTal_v1_Chr1_+_11568654_11568654 0.64 AT1G32160.1
AT1G32160
beta-casein (DUF760)
arTal_v1_Chr1_-_29869784_29869784 0.64 AT1G79410.1
OCT5
organic cation/carnitine transporter5
arTal_v1_Chr3_-_18373147_18373147 0.64 AT3G49570.1
LSU3
response to low sulfur 3
arTal_v1_Chr3_-_3282131_3282131 0.63 AT3G10525.1
LGO
LOSS OF GIANT CELLS FROM ORGANS
arTal_v1_Chr5_-_21724642_21724701 0.63 AT5G53490.3
AT5G53490.2
AT5G53490.1
AT5G53490.4
AT5G53490
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_+_24279897_24279897 0.63 AT5G60360.3
AT5G60360.2
ALP
aleurain-like protease
arTal_v1_Chr5_+_23167774_23167842 0.63 AT5G57180.1
AT5G57180.2
AT5G57180.4
AT5G57180.3
CIA2
chloroplast import apparatus 2
arTal_v1_Chr5_-_25343369_25343369 0.63 AT5G63180.1
AT5G63180
Pectin lyase-like superfamily protein
arTal_v1_Chr5_+_3347381_3347437 0.63 AT5G10580.3
AT5G10580.4
AT5G10580.1
AT5G10580.2
AT5G10580
plant/protein (Protein of unknown function, DUF599)
arTal_v1_Chr5_-_4639835_4639835 0.63 AT5G14390.1
AT5G14390
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_+_6218319_6218319 0.63 AT4G09890.1
AT4G09890
mediator of RNA polymerase II transcription subunit, putative (DUF3511)
arTal_v1_Chr3_+_20842145_20842145 0.62 AT3G56170.1
CAN
Ca-2+ dependent nuclease
arTal_v1_Chr1_-_149806_149848 0.62 AT1G01390.1
AT1G01390.2
AT1G01390
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr2_-_19114173_19114227 0.62 AT2G46550.3
AT2G46550.1
AT2G46550.2
AT2G46550
transmembrane protein
arTal_v1_Chr5_+_16410782_16410782 0.61 AT5G40950.1
RPL27
ribosomal protein large subunit 27
arTal_v1_Chr5_-_23523818_23523818 0.61 AT5G58130.1
ROS3
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr5_-_4430901_4430901 0.61 AT5G13730.1
SIG4
sigma factor 4
arTal_v1_Chr4_-_2482447_2482447 0.61 AT4G04890.1
PDF2
protodermal factor 2
arTal_v1_Chr4_-_18370698_18370698 0.61 AT4G39510.1
CYP96A12
cytochrome P450, family 96, subfamily A, polypeptide 12
arTal_v1_Chr1_+_9829261_9829261 0.61 AT1G28135.1
AT1G28135
hypothetical protein
arTal_v1_Chr1_-_13900831_13900831 0.61 AT1G36730.1
AT1G36730
Translation initiation factor IF2/IF5
arTal_v1_Chr4_+_16130593_16130669 0.61 AT4G33540.1
AT4G33540.2
AT4G33540
metallo-beta-lactamase family protein
arTal_v1_Chr1_+_29815470_29815506 0.61 AT1G79270.1
AT1G79270.3
AT1G79270.2
AT1G79270.4
ECT8
evolutionarily conserved C-terminal region 8
arTal_v1_Chr5_+_22318305_22318310 0.60 AT5G55000.2
AT5G55000.1
FIP2
potassium channel tetramerization domain-containing protein / pentapeptide repeat-containing protein
arTal_v1_Chr2_-_15783480_15783480 0.60 AT2G37630.1
AS1
myb-like HTH transcriptional regulator family protein
arTal_v1_Chr1_-_8189220_8189234 0.60 AT1G23090.4
AT1G23090.1
AT1G23090.3
AT1G23090.2
AST91
sulfate transporter 91
arTal_v1_Chr3_+_6191461_6191461 0.60 AT3G18080.1
BGLU44
B-S glucosidase 44
arTal_v1_Chr1_-_25238036_25238036 0.60 AT1G67360.1
AT1G67360
Rubber elongation factor protein (REF)
arTal_v1_Chr1_-_19590281_19590281 0.60 AT1G52590.1
AT1G52590
Putative thiol-disulfide oxidoreductase DCC
arTal_v1_Chr3_+_3923735_3923735 0.60 AT3G12320.2
AT3G12320
hypothetical protein
arTal_v1_Chr1_+_23230922_23230922 0.60 AT1G62740.1
Hop2
stress-inducible protein
arTal_v1_Chr5_-_25676823_25676823 0.60 AT5G64170.1
AT5G64170.2
AT5G64170.3
AT5G64170
dentin sialophosphoprotein-like protein
arTal_v1_Chr1_-_3590928_3590928 0.60 AT1G10760.1
AT1G10760.3
SEX1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein
arTal_v1_Chr1_-_25238216_25238216 0.60 AT1G67360.2
AT1G67360
Rubber elongation factor protein (REF)
arTal_v1_Chr3_-_3337446_3337446 0.60 AT3G10670.1
NAP7
non-intrinsic ABC protein 7
arTal_v1_Chr4_-_8095749_8095749 0.60 AT4G14020.1
AT4G14020
Rapid alkalinization factor (RALF) family protein
arTal_v1_Chr5_-_20164729_20164729 0.59 AT5G49660.1
XIP1
Leucine-rich repeat transmembrane protein kinase family protein
arTal_v1_Chr5_+_21771811_21771811 0.59 AT5G53590.1
AT5G53590
SAUR-like auxin-responsive protein family
arTal_v1_Chr3_-_19547171_19547171 0.59 AT3G52740.1
AT3G52740
hypothetical protein
arTal_v1_Chr5_+_21910471_21910471 0.59 AT5G53970.1
TAT7
Tyrosine transaminase family protein
arTal_v1_Chr3_-_4174934_4174934 0.59 AT3G13040.2
AT3G13040
myb-like HTH transcriptional regulator family protein
arTal_v1_Chr1_+_29354944_29354944 0.59 AT1G78070.1
AT1G78070
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr5_+_20282111_20282111 0.59 AT5G49880.1
MAD1
mitotic checkpoint family protein
arTal_v1_Chr4_+_6818058_6818058 0.59 AT4G11175.1
AT4G11175
Nucleic acid-binding, OB-fold-like protein
arTal_v1_Chr3_+_6073731_6073731 0.59 AT3G17750.1
AT3G17750
Protein kinase superfamily protein
arTal_v1_Chr4_+_15202288_15202288 0.59 AT4G31330.1
AT4G31330
transmembrane protein, putative (Protein of unknown function, DUF599)
arTal_v1_Chr3_-_22169984_22169984 0.59 AT3G60030.1
SPL12
squamosa promoter-binding protein-like 12
arTal_v1_Chr2_-_15797059_15797059 0.59 AT2G37660.1
AT2G37660
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr3_-_3025945_3025945 0.59 AT3G09850.1
AT3G09850
D111/G-patch domain-containing protein
arTal_v1_Chr5_-_18142147_18142159 0.58 AT5G44930.3
AT5G44930.1
AT5G44930.2
ARAD2
Exostosin family protein
arTal_v1_Chr1_-_29715017_29715017 0.58 AT1G78990.1
AT1G78990
HXXXD-type acyl-transferase family protein
arTal_v1_Chr1_-_23236447_23236447 0.58 AT1G62750.1
SCO1
Translation elongation factor EFG/EF2 protein
arTal_v1_Chr1_-_156178_156178 0.58 AT1G01420.2
UGT72B3
UDP-glucosyl transferase 72B3
arTal_v1_Chr1_-_27257081_27257081 0.58 AT1G72410.2
AT1G72410.1
AT1G72410
COP1-interacting protein-like protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G15830

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.1 GO:0010266 response to vitamin B1(GO:0010266)
0.6 1.8 GO:0071281 cellular response to iron ion(GO:0071281)
0.6 3.4 GO:0009413 response to flooding(GO:0009413)
0.5 2.1 GO:0030418 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.4 3.8 GO:0009819 drought recovery(GO:0009819)
0.4 0.4 GO:0098659 inorganic cation import into cell(GO:0098659) inorganic ion import into cell(GO:0099587)
0.4 1.1 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.4 1.1 GO:1900409 regulation of cellular response to oxidative stress(GO:1900407) positive regulation of cellular response to oxidative stress(GO:1900409)
0.4 1.1 GO:0098532 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.4 1.1 GO:0006659 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.3 1.7 GO:0010360 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.3 1.3 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.3 1.2 GO:0060964 regulation of gene silencing by miRNA(GO:0060964)
0.3 0.3 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.3 0.3 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.3 0.9 GO:0002009 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.3 1.7 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.3 1.9 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.3 1.1 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.3 0.5 GO:1902884 regulation of response to oxidative stress(GO:1902882) positive regulation of response to oxidative stress(GO:1902884)
0.3 1.0 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.2 1.9 GO:0016584 nucleosome positioning(GO:0016584)
0.2 1.2 GO:1904589 regulation of protein import(GO:1904589)
0.2 0.5 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.2 0.9 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.2 0.7 GO:0006059 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.2 1.1 GO:0042550 photosystem I stabilization(GO:0042550)
0.2 0.6 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.2 3.2 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.2 1.0 GO:0005980 glycogen catabolic process(GO:0005980)
0.2 0.8 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.2 1.0 GO:0019323 pentose catabolic process(GO:0019323)
0.2 0.8 GO:0080093 regulation of photorespiration(GO:0080093)
0.2 0.6 GO:0071485 cellular response to absence of light(GO:0071485)
0.2 0.6 GO:0006424 glutamyl-tRNA aminoacylation(GO:0006424)
0.2 1.1 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.2 1.8 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.2 0.7 GO:0000472 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000472) endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000480)
0.2 1.8 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.2 1.2 GO:0090548 response to nitrate starvation(GO:0090548)
0.2 0.7 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.2 0.7 GO:1901562 response to paraquat(GO:1901562)
0.2 0.7 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.2 0.8 GO:0008608 attachment of spindle microtubules to kinetochore(GO:0008608)
0.2 0.2 GO:0006308 DNA catabolic process(GO:0006308)
0.2 0.7 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.2 0.5 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.2 0.3 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.2 1.8 GO:0009610 response to symbiotic fungus(GO:0009610)
0.2 0.7 GO:0006741 NADP biosynthetic process(GO:0006741)
0.2 1.0 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.2 0.8 GO:1901535 regulation of DNA demethylation(GO:1901535)
0.2 0.5 GO:0051202 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.2 0.5 GO:0009093 cysteine catabolic process(GO:0009093)
0.2 1.4 GO:0009942 longitudinal axis specification(GO:0009942)
0.2 1.2 GO:0009061 anaerobic respiration(GO:0009061)
0.2 0.3 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.2 0.5 GO:0035461 thiamine pyrophosphate transport(GO:0030974) vitamin transmembrane transport(GO:0035461) azole transport(GO:0045117)
0.2 0.8 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.2 0.6 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.2 1.4 GO:0071490 cellular response to far red light(GO:0071490)
0.1 0.7 GO:0010136 ureide metabolic process(GO:0010135) ureide catabolic process(GO:0010136)
0.1 1.4 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.1 5.5 GO:0055072 iron ion homeostasis(GO:0055072)
0.1 0.3 GO:0010343 singlet oxygen-mediated programmed cell death(GO:0010343)
0.1 0.7 GO:0051098 regulation of binding(GO:0051098)
0.1 0.4 GO:0090547 response to low humidity(GO:0090547)
0.1 0.8 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.1 0.4 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.1 0.5 GO:0019433 triglyceride catabolic process(GO:0019433)
0.1 1.0 GO:0006000 fructose metabolic process(GO:0006000)
0.1 0.5 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.1 0.4 GO:0034727 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.1 0.3 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 1.0 GO:0044375 regulation of peroxisome size(GO:0044375)
0.1 0.8 GO:1904961 quiescent center organization(GO:1904961)
0.1 0.4 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.1 0.3 GO:0010288 response to lead ion(GO:0010288)
0.1 1.1 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 0.5 GO:0050993 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.1 0.5 GO:0052746 inositol phosphorylation(GO:0052746)
0.1 0.5 GO:0048200 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.1 0.6 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.1 0.5 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.1 0.8 GO:0006751 glutathione catabolic process(GO:0006751)
0.1 0.4 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.1 0.7 GO:0046717 acid secretion(GO:0046717)
0.1 0.6 GO:1901004 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.1 0.2 GO:0040023 nuclear migration(GO:0007097) establishment of nucleus localization(GO:0040023) nucleus localization(GO:0051647)
0.1 0.8 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.1 0.5 GO:0048480 stigma development(GO:0048480)
0.1 0.6 GO:0060148 positive regulation of posttranscriptional gene silencing(GO:0060148)
0.1 1.1 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.1 0.3 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.1 0.6 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.1 0.3 GO:0045835 negative regulation of meiotic nuclear division(GO:0045835) negative regulation of meiotic cell cycle(GO:0051447)
0.1 3.5 GO:0006012 galactose metabolic process(GO:0006012)
0.1 0.6 GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290)
0.1 1.3 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 0.8 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.1 0.6 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 0.4 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.1 0.7 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.1 3.3 GO:0042631 cellular response to water deprivation(GO:0042631)
0.1 0.7 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.1 0.4 GO:1901334 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.1 0.5 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 0.5 GO:0010731 protein glutathionylation(GO:0010731)
0.1 0.3 GO:1900032 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.1 0.5 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.1 0.9 GO:0006168 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.1 0.8 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.1 0.3 GO:2001294 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.1 0.3 GO:0090549 response to carbon starvation(GO:0090549)
0.1 0.3 GO:0070207 protein homotrimerization(GO:0070207)
0.1 0.8 GO:0006821 chloride transport(GO:0006821)
0.1 0.6 GO:0010338 leaf formation(GO:0010338)
0.1 1.0 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.1 0.5 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.3 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.1 1.5 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 0.3 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.1 0.3 GO:0051693 negative regulation of actin filament depolymerization(GO:0030835) actin filament capping(GO:0051693)
0.1 0.6 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 0.3 GO:0080152 regulation of photosynthesis, dark reaction(GO:0010110) cellular response to anoxia(GO:0071454) regulation of reductive pentose-phosphate cycle(GO:0080152) negative regulation of reductive pentose-phosphate cycle(GO:0080153)
0.1 0.6 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.1 0.6 GO:0006611 protein export from nucleus(GO:0006611)
0.1 0.3 GO:0044277 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.1 0.5 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.1 0.5 GO:0097502 mannosylation(GO:0097502)
0.1 0.3 GO:0009726 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.1 0.5 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 0.3 GO:0055047 generative cell mitosis(GO:0055047)
0.1 0.3 GO:0090143 nucleoid organization(GO:0090143)
0.1 0.3 GO:0048255 mRNA stabilization(GO:0048255)
0.1 0.1 GO:0042660 positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.1 0.6 GO:0010067 procambium histogenesis(GO:0010067)
0.1 0.4 GO:0016559 peroxisome fission(GO:0016559)
0.1 0.3 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.1 0.3 GO:0019483 uracil catabolic process(GO:0006212) beta-alanine biosynthetic process(GO:0019483)
0.1 1.2 GO:0048317 seed morphogenesis(GO:0048317)
0.1 1.4 GO:0009641 shade avoidance(GO:0009641)
0.1 0.3 GO:0051238 vacuolar sequestering(GO:0043181) sequestering of metal ion(GO:0051238)
0.1 0.3 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.1 0.3 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.1 0.7 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.1 0.8 GO:0009231 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.1 0.2 GO:0048451 petal formation(GO:0048451)
0.1 0.2 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 4.5 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 0.5 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.1 0.7 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.1 0.3 GO:0000023 maltose metabolic process(GO:0000023)
0.1 0.2 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.1 0.4 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.1 0.2 GO:0009228 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.1 0.7 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.1 0.5 GO:0000719 photoreactive repair(GO:0000719)
0.1 0.6 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.1 1.0 GO:0048564 photosystem I assembly(GO:0048564)
0.1 0.7 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.1 1.2 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.1 0.8 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 0.2 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 0.3 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 1.4 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.1 1.5 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.1 0.3 GO:0030322 stabilization of membrane potential(GO:0030322)
0.1 0.2 GO:1904580 regulation of intracellular mRNA localization(GO:1904580)
0.1 0.4 GO:0009590 detection of gravity(GO:0009590)
0.1 0.9 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 0.4 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.1 0.9 GO:0005983 starch catabolic process(GO:0005983)
0.1 0.3 GO:0035494 SNARE complex disassembly(GO:0035494)
0.1 1.4 GO:0007602 phototransduction(GO:0007602) red, far-red light phototransduction(GO:0009585)
0.1 0.8 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.1 0.4 GO:0010390 histone monoubiquitination(GO:0010390)
0.1 1.3 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.1 0.3 GO:0016120 carotene biosynthetic process(GO:0016120)
0.1 0.2 GO:0051639 actin filament network formation(GO:0051639)
0.1 0.2 GO:0010447 response to acidic pH(GO:0010447)
0.1 0.4 GO:0010071 root meristem specification(GO:0010071)
0.1 0.3 GO:0060151 peroxisome localization(GO:0060151)
0.1 0.7 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.1 0.4 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.1 0.4 GO:0072337 modified amino acid transport(GO:0072337)
0.1 0.3 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 0.3 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.1 3.0 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.1 0.2 GO:0019343 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) cysteine biosynthetic process via cystathionine(GO:0019343) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.1 1.2 GO:0016226 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.1 0.1 GO:0032204 regulation of telomere maintenance(GO:0032204)
0.1 1.1 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 0.4 GO:0006021 inositol biosynthetic process(GO:0006021)
0.1 1.9 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.1 0.1 GO:0042040 molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040)
0.1 0.6 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.1 0.3 GO:0043489 RNA stabilization(GO:0043489)
0.1 0.4 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 0.7 GO:0051784 negative regulation of mitotic nuclear division(GO:0045839) negative regulation of nuclear division(GO:0051784)
0.1 0.4 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.1 0.2 GO:1901976 regulation of cell cycle checkpoint(GO:1901976) regulation of DNA damage checkpoint(GO:2000001)
0.1 0.5 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.1 0.4 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 0.2 GO:0006434 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.1 0.4 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.1 1.3 GO:0008544 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.1 0.4 GO:0043102 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine biosynthetic process(GO:0071265) L-methionine salvage(GO:0071267)
0.1 0.2 GO:1990532 stress response to nickel ion(GO:1990532)
0.1 0.2 GO:0046203 spermidine catabolic process(GO:0046203)
0.1 0.1 GO:0000255 allantoin metabolic process(GO:0000255)
0.1 1.9 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 0.1 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.1 0.3 GO:0010336 gibberellic acid homeostasis(GO:0010336)
0.1 0.2 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.1 3.5 GO:0009637 response to blue light(GO:0009637)
0.1 0.6 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 1.0 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.1 0.1 GO:0048832 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.1 1.1 GO:0010207 photosystem II assembly(GO:0010207)
0.1 0.2 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.1 0.3 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.1 0.4 GO:0051103 DNA ligation involved in DNA repair(GO:0051103)
0.1 0.3 GO:0051601 exocyst localization(GO:0051601)
0.1 0.4 GO:0071324 cellular response to disaccharide stimulus(GO:0071324) cellular response to sucrose stimulus(GO:0071329)
0.1 0.9 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 0.7 GO:0006744 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.1 0.6 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.1 0.6 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.3 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.0 0.5 GO:0019252 starch biosynthetic process(GO:0019252)
0.0 0.3 GO:0016117 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.0 0.6 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.3 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.0 0.1 GO:0051204 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.0 0.2 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.0 0.5 GO:0010099 regulation of photomorphogenesis(GO:0010099)
0.0 0.2 GO:0051211 anisotropic cell growth(GO:0051211)
0.0 0.2 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.0 0.4 GO:1902074 response to salt(GO:1902074)
0.0 0.5 GO:0000266 mitochondrial fission(GO:0000266)
0.0 0.4 GO:0061727 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 0.6 GO:0006278 RNA-dependent DNA biosynthetic process(GO:0006278) telomere maintenance via telomerase(GO:0007004)
0.0 0.2 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.0 0.1 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.0 0.1 GO:0071277 cellular response to calcium ion(GO:0071277)
0.0 0.2 GO:0061062 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.0 0.6 GO:0052018 virus induced gene silencing(GO:0009616) modulation by symbiont of RNA levels in host(GO:0052018) modulation of RNA levels in other organism involved in symbiotic interaction(GO:0052249) cellular response to virus(GO:0098586)
0.0 0.3 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 0.2 GO:0032324 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.0 0.2 GO:0009643 photosynthetic acclimation(GO:0009643)
0.0 0.2 GO:0046477 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.0 0.2 GO:0060919 auxin influx(GO:0060919)
0.0 4.0 GO:0009658 chloroplast organization(GO:0009658)
0.0 0.3 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.3 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.0 1.5 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.4 GO:0031053 primary miRNA processing(GO:0031053)
0.0 1.3 GO:0051453 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.0 0.1 GO:0015783 GDP-fucose transport(GO:0015783) UDP-glucose transport(GO:0015786)
0.0 1.5 GO:0051170 nuclear import(GO:0051170)
0.0 1.5 GO:0010286 heat acclimation(GO:0010286)
0.0 0.2 GO:0010540 basipetal auxin transport(GO:0010540)
0.0 0.3 GO:0031221 arabinan metabolic process(GO:0031221)
0.0 0.1 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.0 0.3 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.0 0.5 GO:0010332 response to gamma radiation(GO:0010332)
0.0 0.4 GO:0009750 response to fructose(GO:0009750)
0.0 0.5 GO:0010037 response to carbon dioxide(GO:0010037)
0.0 0.9 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.5 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.0 0.3 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.0 1.0 GO:0007030 Golgi organization(GO:0007030)
0.0 0.4 GO:0017157 regulation of exocytosis(GO:0017157)
0.0 0.2 GO:0071586 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.0 1.4 GO:0072666 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.0 1.7 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.0 0.5 GO:0061572 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 3.1 GO:0007623 circadian rhythm(GO:0007623) rhythmic process(GO:0048511)
0.0 0.3 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.1 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.0 0.2 GO:0070070 proton-transporting V-type ATPase complex assembly(GO:0070070) vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.0 0.2 GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.0 0.3 GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.0 2.5 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.3 GO:0010048 vernalization response(GO:0010048)
0.0 0.2 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.0 0.2 GO:0051318 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.0 1.0 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 1.3 GO:0043038 amino acid activation(GO:0043038) tRNA aminoacylation(GO:0043039)
0.0 0.7 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.3 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.1 GO:0010225 inactivation of MAPK activity(GO:0000188) response to UV-C(GO:0010225)
0.0 0.1 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.0 0.2 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.0 1.3 GO:0009657 plastid organization(GO:0009657)
0.0 0.2 GO:0070534 protein K63-linked ubiquitination(GO:0070534)
0.0 0.1 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.5 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.0 0.1 GO:0016578 histone deubiquitination(GO:0016578)
0.0 0.7 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.0 0.1 GO:0007142 male meiosis II(GO:0007142)
0.0 0.3 GO:0000338 protein deneddylation(GO:0000338)
0.0 0.3 GO:0034311 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.0 0.9 GO:0031122 cytoplasmic microtubule organization(GO:0031122)
0.0 0.3 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.2 GO:0045487 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.0 0.1 GO:0048442 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.0 0.4 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.6 GO:0051260 protein homooligomerization(GO:0051260)
0.0 0.3 GO:0048017 inositol lipid-mediated signaling(GO:0048017)
0.0 0.2 GO:0006828 manganese ion transport(GO:0006828)
0.0 0.1 GO:0018027 peptidyl-lysine dimethylation(GO:0018027)
0.0 0.2 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.0 0.1 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.0 0.2 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.3 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.0 0.2 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.0 1.1 GO:0051084 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.0 0.1 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.0 0.1 GO:0043171 peptide catabolic process(GO:0043171)
0.0 0.1 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.2 GO:0055075 potassium ion homeostasis(GO:0055075)
0.0 0.3 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.1 GO:0000478 endonucleolytic cleavage involved in rRNA processing(GO:0000478)
0.0 0.7 GO:0006730 one-carbon metabolic process(GO:0006730)
0.0 0.1 GO:1990641 response to iron ion starvation(GO:1990641)
0.0 0.2 GO:0046149 chlorophyll catabolic process(GO:0015996) pigment catabolic process(GO:0046149)
0.0 0.3 GO:0034765 regulation of ion transmembrane transport(GO:0034765)
0.0 0.3 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.0 0.2 GO:0043967 histone H4 acetylation(GO:0043967)
0.0 0.7 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.0 0.2 GO:0046292 formaldehyde metabolic process(GO:0046292) formaldehyde catabolic process(GO:0046294)
0.0 1.3 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.0 0.4 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.1 GO:0019563 alditol catabolic process(GO:0019405) glycerol catabolic process(GO:0019563)
0.0 0.1 GO:0032012 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.3 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 0.4 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 0.0 GO:0046208 spermine catabolic process(GO:0046208)
0.0 0.1 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.0 1.2 GO:0010026 trichome differentiation(GO:0010026)
0.0 0.3 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.2 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0 0.4 GO:0006641 triglyceride metabolic process(GO:0006641)
0.0 0.8 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 0.2 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.4 GO:0031167 rRNA methylation(GO:0031167)
0.0 0.2 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.4 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.0 0.3 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.7 GO:0040034 regulation of development, heterochronic(GO:0040034)
0.0 0.6 GO:0009746 response to hexose(GO:0009746)
0.0 0.2 GO:0007292 female gamete generation(GO:0007292) embryo sac egg cell differentiation(GO:0009560)
0.0 0.2 GO:0006265 DNA topological change(GO:0006265)
0.0 1.2 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.7 GO:0006338 chromatin remodeling(GO:0006338)
0.0 0.3 GO:0006760 folic acid-containing compound metabolic process(GO:0006760)
0.0 0.2 GO:0008356 asymmetric cell division(GO:0008356)
0.0 0.5 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.3 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.1 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.0 0.3 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.0 0.2 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.1 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.2 GO:0046352 disaccharide catabolic process(GO:0046352)
0.0 0.2 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.0 0.1 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.0 0.1 GO:0045039 inner mitochondrial membrane organization(GO:0007007) protein import into mitochondrial inner membrane(GO:0045039)
0.0 0.3 GO:0010252 auxin homeostasis(GO:0010252)
0.0 0.1 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.1 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.0 0.5 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 0.0 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.0 0.8 GO:0048544 recognition of pollen(GO:0048544)
0.0 0.3 GO:0000470 maturation of LSU-rRNA(GO:0000470)
0.0 0.1 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.0 0.0 GO:0009120 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.0 0.0 GO:0042353 fucose biosynthetic process(GO:0042353)
0.0 0.4 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.0 0.5 GO:0006612 protein targeting to membrane(GO:0006612)
0.0 0.3 GO:0006284 base-excision repair(GO:0006284)
0.0 0.1 GO:1902969 mitotic DNA replication(GO:1902969)
0.0 0.5 GO:0090305 nucleic acid phosphodiester bond hydrolysis(GO:0090305)
0.0 0.8 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.2 GO:0060968 regulation of gene silencing(GO:0060968)
0.0 0.0 GO:0043132 NAD transport(GO:0043132)
0.0 0.1 GO:0035196 production of miRNAs involved in gene silencing by miRNA(GO:0035196)
0.0 0.2 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.1 GO:0007143 female meiotic division(GO:0007143)
0.0 0.1 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.0 0.3 GO:0071805 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.0 0.2 GO:0046219 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.0 0.1 GO:0051568 histone H3-K4 methylation(GO:0051568)
0.0 0.0 GO:0051031 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.0 0.2 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.0 0.0 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.0 0.1 GO:0036065 fucosylation(GO:0036065)
0.0 0.3 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.0 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.0 0.2 GO:0030091 protein repair(GO:0030091)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.0 GO:0031352 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.3 1.3 GO:0010007 magnesium chelatase complex(GO:0010007)
0.2 1.0 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.2 0.8 GO:0009509 chromoplast(GO:0009509)
0.2 0.9 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 1.2 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 0.7 GO:0005719 nuclear euchromatin(GO:0005719)
0.1 0.7 GO:0009569 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.1 2.7 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.1 0.4 GO:0043186 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.1 1.3 GO:0016272 prefoldin complex(GO:0016272)
0.1 1.1 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 1.7 GO:0000786 nucleosome(GO:0000786)
0.1 0.6 GO:0005782 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.1 0.2 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.1 0.9 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.1 0.7 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.1 0.5 GO:0034426 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.1 0.4 GO:0032807 DNA ligase IV complex(GO:0032807)
0.1 0.3 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.1 1.2 GO:0048500 signal recognition particle(GO:0048500)
0.1 0.3 GO:0070847 core mediator complex(GO:0070847)
0.1 1.7 GO:0000776 kinetochore(GO:0000776)
0.1 1.3 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.1 1.2 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.1 0.6 GO:0031379 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.1 0.3 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.1 1.1 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.1 0.3 GO:0030863 cortical cytoskeleton(GO:0030863)
0.1 1.4 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 0.4 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.1 0.2 GO:0032432 actin filament bundle(GO:0032432)
0.1 0.5 GO:0000346 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.1 0.3 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.1 1.1 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.1 0.3 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.1 0.5 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.1 0.8 GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261)
0.1 0.5 GO:0000439 core TFIIH complex(GO:0000439)
0.1 2.0 GO:0005881 cytoplasmic microtubule(GO:0005881)
0.1 0.3 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.1 1.0 GO:0031965 nuclear membrane(GO:0031965)
0.1 0.2 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.1 0.4 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.1 2.9 GO:0009528 plastid inner membrane(GO:0009528)
0.1 2.9 GO:0009707 chloroplast outer membrane(GO:0009707)
0.1 1.3 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.1 1.0 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 0.3 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.5 GO:0005662 DNA replication factor A complex(GO:0005662)
0.1 3.6 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.4 GO:0000813 ESCRT I complex(GO:0000813)
0.0 0.4 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.0 1.5 GO:0031977 thylakoid lumen(GO:0031977)
0.0 1.9 GO:0016592 mediator complex(GO:0016592)
0.0 0.4 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.3 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.0 0.3 GO:0009360 DNA polymerase III complex(GO:0009360)
0.0 0.3 GO:0070652 HAUS complex(GO:0070652)
0.0 0.4 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.0 0.2 GO:0005884 actin filament(GO:0005884)
0.0 0.4 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.0 0.2 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.0 1.4 GO:0009524 phragmoplast(GO:0009524)
0.0 0.3 GO:0005844 polysome(GO:0005844)
0.0 0.1 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 0.5 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 1.5 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.0 0.8 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.8 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.0 1.2 GO:0009504 cell plate(GO:0009504)
0.0 0.2 GO:0098553 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.0 0.3 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.0 22.4 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.1 GO:0000783 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.0 0.8 GO:0005871 kinesin complex(GO:0005871)
0.0 0.3 GO:0005677 chromatin silencing complex(GO:0005677)
0.0 0.4 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 1.8 GO:0005770 late endosome(GO:0005770)
0.0 0.2 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 0.1 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276) proton-transporting ATP synthase complex, coupling factor F(o)(GO:0045263)
0.0 0.3 GO:0010168 ER body(GO:0010168)
0.0 7.3 GO:0009941 chloroplast envelope(GO:0009941)
0.0 0.5 GO:0035097 histone methyltransferase complex(GO:0035097)
0.0 3.2 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.3 GO:0005682 U5 snRNP(GO:0005682)
0.0 0.1 GO:0072686 mitotic spindle(GO:0072686)
0.0 0.2 GO:0035619 root hair tip(GO:0035619)
0.0 0.1 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.0 0.4 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.3 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 1.6 GO:0016607 nuclear speck(GO:0016607)
0.0 0.2 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.0 3.5 GO:0009579 thylakoid(GO:0009579)
0.0 8.7 GO:0005730 nucleolus(GO:0005730)
0.0 0.1 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 0.3 GO:0070461 SAGA-type complex(GO:0070461)
0.0 2.2 GO:0033648 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 1.3 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.5 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.1 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.0 0.2 GO:0005769 early endosome(GO:0005769)
0.0 0.1 GO:0055037 recycling endosome(GO:0055037)
0.0 0.3 GO:0098799 outer mitochondrial membrane protein complex(GO:0098799)
0.0 0.5 GO:0005764 lysosome(GO:0005764)
0.0 0.6 GO:0005635 nuclear envelope(GO:0005635)
0.0 0.2 GO:0030125 clathrin vesicle coat(GO:0030125) clathrin-coated vesicle membrane(GO:0030665)
0.0 0.5 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.1 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.0 0.1 GO:0000347 THO complex(GO:0000347)
0.0 2.2 GO:0000785 chromatin(GO:0000785)
0.0 1.1 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.7 GO:0015629 actin cytoskeleton(GO:0015629)
0.0 0.4 GO:0044448 cell cortex part(GO:0044448)
0.0 0.0 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.0 28.2 GO:0005829 cytosol(GO:0005829)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.1 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.4 1.4 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.4 3.2 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.3 2.1 GO:0019144 ADP-sugar diphosphatase activity(GO:0019144) ADP-ribose pyrophosphohydrolase activity(GO:0080041)
0.3 1.0 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.3 1.4 GO:0019172 glyoxalase III activity(GO:0019172)
0.3 1.7 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.3 1.0 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.3 2.2 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.3 0.9 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.3 1.1 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.3 1.4 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.3 1.1 GO:0050815 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.3 0.8 GO:0043325 phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.2 1.0 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.2 1.3 GO:0051003 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.2 2.6 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.2 1.7 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.2 0.6 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.2 1.0 GO:0004322 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.2 1.0 GO:0008184 glycogen phosphorylase activity(GO:0008184)
0.2 0.8 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.2 0.6 GO:0070678 preprotein binding(GO:0070678)
0.2 0.8 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.2 0.6 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.2 1.7 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.2 1.1 GO:0070547 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.2 0.4 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.2 0.7 GO:0080002 UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.2 0.6 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.2 0.6 GO:0004528 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.2 2.0 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.2 0.7 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.2 0.5 GO:0051669 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.2 0.7 GO:0019156 isoamylase activity(GO:0019156)
0.2 0.5 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.2 0.7 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.2 0.5 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726) oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.2 2.3 GO:2001070 starch binding(GO:2001070)
0.2 0.8 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.2 0.3 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.2 0.5 GO:0090422 thiamine pyrophosphate transporter activity(GO:0090422)
0.2 0.3 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.2 0.8 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.1 0.9 GO:0030527 structural constituent of chromatin(GO:0030527)
0.1 1.0 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.1 0.8 GO:0019904 protein domain specific binding(GO:0019904)
0.1 0.9 GO:0032977 membrane insertase activity(GO:0032977)
0.1 0.9 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.5 GO:0003935 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.1 0.4 GO:0035671 enone reductase activity(GO:0035671)
0.1 0.5 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.1 0.5 GO:0050347 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.1 0.5 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 1.3 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.1 0.8 GO:0004567 beta-mannosidase activity(GO:0004567)
0.1 0.9 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.5 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.3 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 0.7 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.1 0.8 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.1 0.3 GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity(GO:0003864)
0.1 0.9 GO:0017091 AU-rich element binding(GO:0017091)
0.1 0.4 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.1 0.3 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.1 0.3 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 0.6 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.3 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.1 0.7 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.1 0.6 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.1 0.3 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.1 0.9 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 0.5 GO:0000048 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.1 0.4 GO:0070182 DNA polymerase binding(GO:0070182)
0.1 1.0 GO:0017022 myosin binding(GO:0017022)
0.1 0.4 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.1 0.6 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.4 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.1 0.5 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)
0.1 0.6 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.1 1.5 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 0.7 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.1 0.8 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 2.8 GO:0048029 monosaccharide binding(GO:0048029)
0.1 0.4 GO:0070034 telomerase RNA binding(GO:0070034)
0.1 0.4 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity(GO:0010309)
0.1 1.4 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.1 1.0 GO:0008198 ferrous iron binding(GO:0008198)
0.1 0.4 GO:0030371 translation repressor activity(GO:0030371)
0.1 0.4 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.1 0.3 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.1 1.5 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.3 GO:0008481 sphinganine kinase activity(GO:0008481)
0.1 0.3 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.1 0.3 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.1 0.6 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.1 0.5 GO:0051765 inositol tetrakisphosphate kinase activity(GO:0051765)
0.1 1.1 GO:0019210 kinase inhibitor activity(GO:0019210)
0.1 0.5 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.1 0.6 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.1 0.3 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.1 1.0 GO:0008312 7S RNA binding(GO:0008312)
0.1 0.5 GO:0000257 nitrilase activity(GO:0000257) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles(GO:0016815) nitrile hydratase activity(GO:0018822) indole-3-acetonitrile nitrilase activity(GO:0080061)
0.1 0.3 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.1 0.6 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 0.9 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.1 0.3 GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity(GO:0008893) diphosphoric monoester hydrolase activity(GO:0016794)
0.1 0.8 GO:0072349 modified amino acid transmembrane transporter activity(GO:0072349)
0.1 1.2 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.1 0.5 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.1 1.0 GO:0030674 protein binding, bridging(GO:0030674)
0.1 0.2 GO:0016504 peptidase activator activity(GO:0016504)
0.1 0.2 GO:0004106 chorismate mutase activity(GO:0004106)
0.1 1.4 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 0.6 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.4 GO:0036456 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.1 0.3 GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity(GO:0004719)
0.1 0.4 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.1 0.3 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.4 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.1 0.2 GO:0004046 aminoacylase activity(GO:0004046)
0.1 0.5 GO:0001653 peptide receptor activity(GO:0001653)
0.1 1.3 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 0.2 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.1 0.2 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 0.5 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.1 0.3 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.1 0.2 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1 0.2 GO:0016672 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.1 1.9 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.1 0.2 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.1 0.3 GO:0000213 tRNA-intron endonuclease activity(GO:0000213)
0.1 0.4 GO:0004373 glycogen (starch) synthase activity(GO:0004373)
0.1 0.3 GO:0032791 lead ion binding(GO:0032791)
0.1 1.2 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.1 0.4 GO:0015462 protein-transmembrane transporting ATPase activity(GO:0015462)
0.1 0.2 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.1 0.4 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.1 0.5 GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730)
0.1 0.3 GO:0022841 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.1 0.2 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.1 0.9 GO:0004743 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.1 0.4 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.1 0.2 GO:0047493 sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
0.1 0.3 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.1 0.9 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 0.5 GO:0004806 triglyceride lipase activity(GO:0004806)
0.1 0.3 GO:0051731 polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.1 0.2 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.1 0.2 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.1 0.3 GO:0034511 U3 snoRNA binding(GO:0034511)
0.1 0.3 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.1 1.2 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 0.3 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.1 0.2 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 2.4 GO:0003713 transcription coactivator activity(GO:0003713)
0.1 0.2 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.1 0.2 GO:0004488 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.1 0.7 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.0 0.7 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.2 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.4 GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor(GO:0016647)
0.0 0.3 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.0 0.5 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0 0.6 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 0.2 GO:0008301 DNA binding, bending(GO:0008301)
0.0 0.2 GO:0031409 pigment binding(GO:0031409)
0.0 1.7 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 1.4 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.5 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.0 0.3 GO:0008022 protein C-terminus binding(GO:0008022)
0.0 0.6 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 1.1 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.9 GO:0030276 clathrin binding(GO:0030276)
0.0 4.3 GO:0051015 actin filament binding(GO:0051015)
0.0 0.2 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.0 0.2 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.0 2.7 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.3 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 0.3 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.2 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.0 0.3 GO:0051723 protein methylesterase activity(GO:0051723)
0.0 0.3 GO:0004623 phospholipase A2 activity(GO:0004623)
0.0 0.2 GO:0004348 glucosylceramidase activity(GO:0004348)
0.0 0.5 GO:0051879 Hsp90 protein binding(GO:0051879)
0.0 1.1 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.2 GO:0035197 siRNA binding(GO:0035197)
0.0 0.5 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 0.3 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.0 0.8 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.6 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.5 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0 0.1 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.0 0.3 GO:0017116 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.7 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.0 0.2 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.0 0.4 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 0.4 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.4 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 1.7 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.2 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.0 0.5 GO:0004124 cysteine synthase activity(GO:0004124)
0.0 0.6 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 3.3 GO:0000989 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 0.4 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.5 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.1 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.0 0.3 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 0.1 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.0 0.2 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.2 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.0 0.4 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.0 0.3 GO:0016849 phosphorus-oxygen lyase activity(GO:0016849)
0.0 0.3 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 1.3 GO:0003779 actin binding(GO:0003779)
0.0 1.0 GO:0051087 chaperone binding(GO:0051087)
0.0 4.2 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 2.2 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.3 GO:0035514 DNA demethylase activity(GO:0035514)
0.0 0.2 GO:0016151 nickel cation binding(GO:0016151)
0.0 1.8 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.4 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.2 GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor(GO:0016634)
0.0 1.9 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.3 GO:0051011 microtubule minus-end binding(GO:0051011)
0.0 0.4 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.2 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.0 0.3 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 1.6 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.1 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.1 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.0 2.3 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.2 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.0 0.8 GO:0000049 tRNA binding(GO:0000049)
0.0 0.3 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.1 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.0 0.5 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 0.4 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.7 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.1 GO:0000702 oxidized base lesion DNA N-glycosylase activity(GO:0000702)
0.0 0.2 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.5 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 0.1 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 0.1 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.0 0.1 GO:0004775 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.0 0.1 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.0 0.2 GO:0016886 ligase activity, forming phosphoric ester bonds(GO:0016886)
0.0 1.5 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.2 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.0 0.2 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.4 GO:0003951 NAD+ kinase activity(GO:0003951)
0.0 0.3 GO:0031072 heat shock protein binding(GO:0031072)
0.0 0.3 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.0 0.1 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.0 1.7 GO:0003727 single-stranded RNA binding(GO:0003727)
0.0 0.5 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.1 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457)
0.0 0.2 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 0.7 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.2 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.0 5.5 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.2 GO:0060090 binding, bridging(GO:0060090)
0.0 0.2 GO:0017070 U6 snRNA binding(GO:0017070)
0.0 0.4 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 1.7 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.1 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.0 0.2 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.3 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.2 GO:0043495 protein anchor(GO:0043495)
0.0 0.8 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.2 GO:0008169 C-methyltransferase activity(GO:0008169)
0.0 0.3 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 0.1 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.0 0.6 GO:0016597 amino acid binding(GO:0016597)
0.0 0.1 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 0.6 GO:0043022 ribosome binding(GO:0043022)
0.0 2.3 GO:0032561 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 0.2 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.2 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.1 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.0 0.2 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.0 0.1 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.1 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.9 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 0.4 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.0 GO:0003856 3-dehydroquinate synthase activity(GO:0003856)
0.0 0.2 GO:0016844 strictosidine synthase activity(GO:0016844)
0.0 0.1 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.0 0.3 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.0 0.7 GO:0003678 DNA helicase activity(GO:0003678)
0.0 0.2 GO:0019200 carbohydrate kinase activity(GO:0019200)
0.0 0.6 GO:0034062 DNA-directed RNA polymerase activity(GO:0003899) RNA polymerase activity(GO:0034062)
0.0 0.4 GO:0031593 polyubiquitin binding(GO:0031593)
0.0 0.7 GO:0009931 calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.2 GO:0003684 damaged DNA binding(GO:0003684)
0.0 0.5 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.0 0.0 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.0 0.1 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.1 GO:1990137 plant seed peroxidase activity(GO:1990137)
0.0 0.5 GO:0042393 histone binding(GO:0042393)
0.0 0.1 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.5 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.0 0.1 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.2 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 2.2 GO:0016887 ATPase activity(GO:0016887)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.2 0.6 PID LYMPH ANGIOGENESIS PATHWAY VEGFR3 signaling in lymphatic endothelium
0.1 0.4 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.1 0.4 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.5 PID FCER1 PATHWAY Fc-epsilon receptor I signaling in mast cells
0.0 0.3 PID MTOR 4PATHWAY mTOR signaling pathway
0.0 0.2 PID AP1 PATHWAY AP-1 transcription factor network
0.0 0.1 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.
0.0 0.2 PID ATM PATHWAY ATM pathway
0.0 0.1 PID CDC42 PATHWAY CDC42 signaling events
0.0 0.0 PID VEGFR1 2 PATHWAY Signaling events mediated by VEGFR1 and VEGFR2

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 REACTOME ARMS MEDIATED ACTIVATION Genes involved in ARMS-mediated activation
0.1 0.4 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.4 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.1 0.4 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.1 0.4 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.1 0.8 REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS Genes involved in Association of TriC/CCT with target proteins during biosynthesis
0.1 0.3 REACTOME APOPTOTIC EXECUTION PHASE Genes involved in Apoptotic execution phase
0.1 2.1 REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex
0.1 0.2 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.1 0.3 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.1 0.5 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.1 0.3 REACTOME LIPOPROTEIN METABOLISM Genes involved in Lipoprotein metabolism
0.0 0.2 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.0 0.2 REACTOME RESOLUTION OF AP SITES VIA THE MULTIPLE NUCLEOTIDE PATCH REPLACEMENT PATHWAY Genes involved in Resolution of AP sites via the multiple-nucleotide patch replacement pathway
0.0 0.1 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.0 0.2 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
0.0 0.1 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA