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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G16820

Z-value: 3.59

Transcription factors associated with AT5G16820

Gene Symbol Gene ID Gene Info
AT5G16820
AT5G16820 heat shock factor 3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HSF3arTal_v1_Chr5_+_5530195_55301970.832.5e-04Click!

Activity profile of AT5G16820 motif

Sorted Z-values of AT5G16820 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_+_5209717_5209717 6.28 AT5G15960.1
KIN1
stress-responsive protein (KIN1) / stress-induced protein (KIN1)
arTal_v1_Chr3_+_4729399_4729438 5.31 AT3G14210.1
AT3G14210.2
ESM1
GDSL-like lipase/acylhydrolase superfamily protein
arTal_v1_Chr3_-_2699257_2699257 4.76 AT3G08860.2
PYD4
PYRIMIDINE 4
arTal_v1_Chr5_+_21240717_21240717 4.75 AT5G52310.1
LTI78
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
arTal_v1_Chr3_-_2699420_2699420 4.67 AT3G08860.1
PYD4
PYRIMIDINE 4
arTal_v1_Chr4_-_2992618_2992618 4.52 AT4G05631.1
AT4G05631
hypothetical protein
arTal_v1_Chr5_-_8444101_8444101 4.49 AT5G24660.1
LSU2
response to low sulfur 2
arTal_v1_Chr2_+_18346306_18346306 4.39 AT2G44460.1
BGLU28
beta glucosidase 28
arTal_v1_Chr2_+_18347765_18347765 4.23 AT2G44460.2
BGLU28
beta glucosidase 28
arTal_v1_Chr1_+_3019639_3019639 4.18 AT1G09350.1
GolS3
galactinol synthase 3
arTal_v1_Chr2_-_19370478_19370478 4.07 AT2G47180.1
GolS1
galactinol synthase 1
arTal_v1_Chr4_-_9607402_9607402 3.87 AT4G17090.1
CT-BMY
chloroplast beta-amylase
arTal_v1_Chr1_+_3020221_3020221 3.86 AT1G09350.2
GolS3
galactinol synthase 3
arTal_v1_Chr1_+_28975255_28975255 3.85 AT1G77120.1
ADH1
alcohol dehydrogenase 1
arTal_v1_Chr3_-_489467_489467 3.67 AT3G02380.1
COL2
CONSTANS-like 2
arTal_v1_Chr2_-_16603059_16603061 3.58 AT2G39800.2
AT2G39800.4
AT2G39800.3
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
arTal_v1_Chr4_+_14954204_14954204 3.58 AT4G30650.1
AT4G30650
Low temperature and salt responsive protein family
arTal_v1_Chr4_+_1292483_1292494 3.45 AT4G02920.1
AT4G02920.2
AT4G02920
hypothetical protein
arTal_v1_Chr3_+_19265141_19265141 3.41 AT3G51910.1
HSFA7A
heat shock transcription factor A7A
arTal_v1_Chr1_+_19685747_19685747 3.40 AT1G52870.1
AT1G52870
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
arTal_v1_Chr1_+_19685545_19685545 3.37 AT1G52870.2
AT1G52870
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
arTal_v1_Chr5_+_5206156_5206156 3.33 AT5G15950.2
AT5G15950
Adenosylmethionine decarboxylase family protein
arTal_v1_Chr5_-_20204595_20204595 3.27 AT5G49730.1
AT5G49730.2
FRO6
ferric reduction oxidase 6
arTal_v1_Chr5_+_5205869_5205869 3.22 AT5G15950.1
AT5G15950
Adenosylmethionine decarboxylase family protein
arTal_v1_Chr5_+_22467337_22467337 3.13 AT5G55450.1
AT5G55450
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr2_+_1993038_1993084 3.12 AT2G05440.2
AT2G05440.9
AT2G05440.5
AT2G05440.1
AT2G05440.6
AT2G05440.3
AT2G05440.4
AT2G05440.8
AT2G05440.7
GRP9
GLYCINE RICH PROTEIN 9
arTal_v1_Chr1_-_1248826_1248876 3.06 AT1G04570.2
AT1G04570.1
AT1G04570
Major facilitator superfamily protein
arTal_v1_Chr5_-_25920254_25920254 3.01 AT5G64840.1
ABCF5
general control non-repressible 5
arTal_v1_Chr1_-_22317070_22317070 3.01 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
arTal_v1_Chr1_-_25238036_25238036 2.98 AT1G67360.1
AT1G67360
Rubber elongation factor protein (REF)
arTal_v1_Chr2_-_16603319_16603319 2.97 AT2G39800.1
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
arTal_v1_Chr5_+_16579936_16579936 2.97 AT5G41410.1
BEL1
POX (plant homeobox) family protein
arTal_v1_Chr4_+_13253084_13253084 2.97 AT4G26150.1
CGA1
cytokinin-responsive gata factor 1
arTal_v1_Chr3_-_21650347_21650347 2.95 AT3G58550.1
AT3G58550
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr1_-_25238216_25238216 2.94 AT1G67360.2
AT1G67360
Rubber elongation factor protein (REF)
arTal_v1_Chr1_-_37757_37871 2.91 AT1G01060.3
AT1G01060.2
AT1G01060.4
AT1G01060.1
AT1G01060.6
AT1G01060.7
AT1G01060.5
LHY
Homeodomain-like superfamily protein
arTal_v1_Chr2_-_18811085_18811125 2.90 AT2G45660.2
AT2G45660.1
AGL20
AGAMOUS-like 20
arTal_v1_Chr3_-_9640918_9640918 2.88 AT3G26300.1
CYP71B34
cytochrome P450, family 71, subfamily B, polypeptide 34
arTal_v1_Chr3_-_23195917_23195917 2.83 AT3G62700.1
ABCC14
multidrug resistance-associated protein 10
arTal_v1_Chr3_-_17475274_17475274 2.82 AT3G47420.3
AT3G47420.1
AT3G47420.2
G3Pp1
putative glycerol-3-phosphate transporter 1
arTal_v1_Chr4_+_17646408_17646489 2.81 AT4G37560.1
AT4G37560.2
AT4G37560
Acetamidase/Formamidase family protein
arTal_v1_Chr3_-_22915393_22915393 2.77 AT3G61890.1
HB-12
homeobox 12
arTal_v1_Chr2_-_10702203_10702203 2.76 AT2G25140.1
CLPB4
casein lytic proteinase B4
arTal_v1_Chr2_+_7316789_7316889 2.75 AT2G16890.3
AT2G16890.2
AT2G16890.1
AT2G16890.4
AT2G16890
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr5_+_451406_451406 2.69 AT5G02240.1
AT5G02240
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr3_-_5173001_5173105 2.68 AT3G15354.4
AT3G15354.1
AT3G15354.2
AT3G15354.3
SPA3
SPA1-related 3
arTal_v1_Chr1_-_24595544_24595544 2.65 AT1G66060.1
AT1G66060
hypothetical protein (DUF577)
arTal_v1_Chr5_+_18627950_18627950 2.60 AT5G45930.1
CHLI2
magnesium chelatase i2
arTal_v1_Chr5_+_23940745_23940782 2.59 AT5G59350.1
AT5G59350.2
AT5G59350.3
AT5G59350
transmembrane protein
arTal_v1_Chr3_-_17133462_17133462 2.59 AT3G46530.1
RPP13
NB-ARC domain-containing disease resistance protein
arTal_v1_Chr4_-_11659105_11659167 2.58 AT4G21990.1
AT4G21990.2
APR3
APS reductase 3
arTal_v1_Chr2_-_8850111_8850111 2.54 AT2G20560.1
AT2G20560
DNAJ heat shock family protein
arTal_v1_Chr1_-_26434538_26434538 2.54 AT1G70200.1
AT1G70200
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr3_-_8085669_8085669 2.53 AT3G22840.1
ELIP1
Chlorophyll A-B binding family protein
arTal_v1_Chr4_-_10325816_10325906 2.52 AT4G18810.2
AT4G18810.1
AT4G18810
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_+_17847042_17847042 2.50 AT1G48300.1
DGAT3
diacylglycerol acyltransferase
arTal_v1_Chr1_-_29459493_29459493 2.50 AT1G78290.2
AT1G78290.3
SNRK2-8
Protein kinase superfamily protein
arTal_v1_Chr1_-_23502269_23502321 2.48 AT1G63360.2
AT1G63360.1
AT1G63360
Disease resistance protein (CC-NBS-LRR class) family
arTal_v1_Chr2_+_13814543_13814543 2.47 AT2G32540.1
CSLB04
cellulose synthase-like B4
arTal_v1_Chr3_+_9489221_9489221 2.47 AT3G25910.1
AT3G25910
MAP kinase kinase kinase, putative (DUF1644)
arTal_v1_Chr3_+_1225919_1225919 2.47 AT3G04550.1
AT3G04550
rubisco accumulation factor-like protein
arTal_v1_Chr1_+_25999837_25999837 2.42 AT1G69160.1
AT1G69160
suppressor
arTal_v1_Chr2_-_1032625_1032718 2.41 AT2G03390.6
AT2G03390.3
AT2G03390.2
AT2G03390.4
AT2G03390.7
AT2G03390.5
AT2G03390.1
AT2G03390
uvrB/uvrC motif-containing protein
arTal_v1_Chr4_-_7316871_7316871 2.40 AT4G12320.1
CYP706A6
cytochrome P450, family 706, subfamily A, polypeptide 6
arTal_v1_Chr5_+_15878698_15878726 2.39 AT5G39660.1
AT5G39660.3
AT5G39660.2
CDF2
cycling DOF factor 2
arTal_v1_Chr1_-_23610653_23610779 2.38 AT1G63670.5
AT1G63670.3
AT1G63670.2
TRM12
hypothetical protein (DUF3741)
arTal_v1_Chr3_+_19845097_19845172 2.38 AT3G53530.2
AT3G53530.1
NAKR3
Chloroplast-targeted copper chaperone protein
arTal_v1_Chr4_+_9171280_9171280 2.37 AT4G16190.1
AT4G16190
Papain family cysteine protease
arTal_v1_Chr5_-_5018347_5018347 2.37 AT5G15450.1
CLPB3
casein lytic proteinase B3
arTal_v1_Chr4_-_12416691_12416691 2.37 AT4G23880.1
AT4G23880
hypothetical protein
arTal_v1_Chr1_+_23230922_23230922 2.35 AT1G62740.1
Hop2
stress-inducible protein
arTal_v1_Chr5_+_18850645_18850776 2.35 AT5G46490.3
AT5G46490.4
AT5G46490.5
AT5G46490.6
AT5G46490.7
AT5G46490.1
AT5G46490.8
AT5G46490.2
AT5G46490
Disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr3_+_5081780_5081908 2.34 AT3G15095.2
AT3G15095.1
AT3G15095.3
HCF243
Serine/Threonine-kinase pakA-like protein
arTal_v1_Chr1_-_29002135_29002143 2.34 AT1G77180.1
AT1G77180.3
AT1G77180.2
SKIP
chromatin protein family
arTal_v1_Chr1_-_3590928_3590928 2.33 AT1G10760.1
AT1G10760.3
SEX1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein
arTal_v1_Chr3_-_9642779_9642779 2.30 AT3G26310.1
CYP71B35
cytochrome P450, family 71, subfamily B, polypeptide 35
arTal_v1_Chr3_+_22635803_22635816 2.29 AT3G61160.3
AT3G61160.6
AT3G61160.5
AT3G61160.4
AT3G61160.2
AT3G61160.1
AT3G61160
Protein kinase superfamily protein
arTal_v1_Chr3_+_8918679_8918679 2.29 AT3G24500.2
MBF1C
multiprotein bridging factor 1C
arTal_v1_Chr5_+_4206738_4206784 2.29 AT5G13200.2
AT5G13200.1
AT5G13200
GRAM domain family protein
arTal_v1_Chr3_-_17658353_17658353 2.29 AT3G47860.1
CHL
chloroplastic lipocalin
arTal_v1_Chr5_-_6240916_6240916 2.28 AT5G18700.1
AT5G18700
kinase family with ARM repeat domain-containing protein
arTal_v1_Chr5_-_23501416_23501416 2.27 AT5G58070.1
TIL
temperature-induced lipocalin
arTal_v1_Chr1_+_27619535_27619535 2.27 AT1G73460.2
AT1G73460.1
AT1G73460
Protein kinase superfamily protein
arTal_v1_Chr3_-_7463525_7463644 2.26 AT3G21250.1
AT3G21250.6
AT3G21250.5
AT3G21250.3
AT3G21250.2
AT3G21250.4
ABCC8
multidrug resistance-associated protein 6
arTal_v1_Chr2_-_15540139_15540139 2.25 AT2G36990.1
SIGF
RNApolymerase sigma-subunit F
arTal_v1_Chr1_-_6152222_6152222 2.25 AT1G17870.1
EGY3
ethylene-dependent gravitropism-deficient and yellow-green-like 3
arTal_v1_Chr2_-_9056481_9056481 2.25 AT2G21130.1
AT2G21130
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
arTal_v1_Chr5_-_24955503_24955503 2.24 AT5G62140.1
AT5G62140
ATP-dependent Clp protease ATP-binding subunit
arTal_v1_Chr1_-_23610327_23610327 2.24 AT1G63670.4
AT1G63670.1
TRM12
hypothetical protein (DUF3741)
arTal_v1_Chr5_-_25676823_25676823 2.20 AT5G64170.1
AT5G64170.2
AT5G64170.3
AT5G64170
dentin sialophosphoprotein-like protein
arTal_v1_Chr3_+_11810726_11810726 2.20 AT3G30180.1
BR6OX2
brassinosteroid-6-oxidase 2
arTal_v1_Chr5_+_5649057_5649193 2.20 AT5G17170.1
AT5G17170.2
ENH1
rubredoxin family protein
arTal_v1_Chr4_-_17197247_17197247 2.19 AT4G36390.1
AT4G36390
Methylthiotransferase
arTal_v1_Chr5_+_105268_105282 2.19 AT5G01260.3
AT5G01260.2
AT5G01260.1
AT5G01260
Carbohydrate-binding-like fold
arTal_v1_Chr1_+_11181504_11181504 2.18 AT1G31280.1
AGO2
Argonaute family protein
arTal_v1_Chr4_-_1197630_1197630 2.18 AT4G02710.1
NET1C
Kinase interacting (KIP1-like) family protein
arTal_v1_Chr3_+_2907479_2907479 2.17 AT3G09450.1
AT3G09450
fusaric acid resistance family protein
arTal_v1_Chr1_+_22555689_22555700 2.17 AT1G61190.2
AT1G61190.3
AT1G61190
LRR and NB-ARC domains-containing disease resistance protein
arTal_v1_Chr2_-_8495892_8495892 2.17 AT2G19650.1
AT2G19650
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr1_-_12745748_12745748 2.16 AT1G34760.1
AT1G34760.2
GRF11
general regulatory factor 11
arTal_v1_Chr3_+_8918267_8918267 2.15 AT3G24500.1
MBF1C
multiprotein bridging factor 1C
arTal_v1_Chr3_-_19802328_19802328 2.15 AT3G53410.1
LUL2
RING/U-box superfamily protein
arTal_v1_Chr1_-_10548140_10548236 2.15 AT1G30070.2
AT1G30070.1
AT1G30070
SGS domain-containing protein
arTal_v1_Chr3_-_22244061_22244125 2.14 AT3G60180.2
AT3G60180.1
AT3G60180
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr5_+_7116687_7116687 2.14 AT5G20960.2
AO1
aldehyde oxidase 1
arTal_v1_Chr1_-_5547753_5547753 2.13 AT1G16210.1
AT1G16210
coiled-coil protein
arTal_v1_Chr5_+_26884203_26884303 2.12 AT5G67385.3
AT5G67385.1
AT5G67385.5
AT5G67385.4
AT5G67385
Phototropic-responsive NPH3 family protein
arTal_v1_Chr5_-_23681935_23681935 2.12 AT5G58590.1
RANBP1
RAN binding protein 1
arTal_v1_Chr5_+_7116455_7116455 2.12 AT5G20960.1
AO1
aldehyde oxidase 1
arTal_v1_Chr4_-_8981829_8981829 2.11 AT4G15780.1
VAMP724
vesicle-associated membrane protein 724
arTal_v1_Chr1_-_4651549_4651549 2.10 AT1G13600.1
bZIP58
basic leucine-zipper 58
arTal_v1_Chr1_+_18342451_18342466 2.10 AT1G49560.1
AT1G49560.2
AT1G49560
Homeodomain-like superfamily protein
arTal_v1_Chr5_-_21291928_21291928 2.10 AT5G52450.1
AT5G52450
MATE efflux family protein
arTal_v1_Chr1_-_17683629_17683719 2.08 AT1G47960.1
AT1G47960.2
C/VIF1
cell wall / vacuolar inhibitor of fructosidase 1
arTal_v1_Chr2_-_12632538_12632538 2.08 AT2G29490.1
GSTU1
glutathione S-transferase TAU 1
arTal_v1_Chr4_+_10633619_10633705 2.08 AT4G19510.3
AT4G19510.4
AT4G19510.5
AT4G19510.6
AT4G19510.8
AT4G19510.7
AT4G19510.9
AT4G19510.1
AT4G19510.10
AT4G19510.2
AT4G19510
Disease resistance protein (TIR-NBS-LRR class)
arTal_v1_Chr1_-_756303_756303 2.08 AT1G03140.1
AT1G03140
splicing factor Prp18 family protein
arTal_v1_Chr2_-_15425129_15425129 2.07 AT2G36800.1
DOGT1
don-glucosyltransferase 1
arTal_v1_Chr5_+_5995479_5995479 2.07 AT5G18130.2
AT5G18130
transmembrane protein
arTal_v1_Chr1_-_7086873_7086873 2.07 AT1G20440.1
COR47
cold-regulated 47
arTal_v1_Chr1_+_22557602_22557602 2.06 AT1G61190.1
AT1G61190
LRR and NB-ARC domains-containing disease resistance protein
arTal_v1_Chr1_-_3590701_3590701 2.06 AT1G10760.2
SEX1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein
arTal_v1_Chr1_-_4921535_4921682 2.05 AT1G14380.3
AT1G14380.4
AT1G14380.2
AT1G14380.5
AT1G14380.6
AT1G14380.7
AT1G14380.1
IQD28
IQ-domain 28
arTal_v1_Chr1_-_23236447_23236447 2.05 AT1G62750.1
SCO1
Translation elongation factor EFG/EF2 protein
arTal_v1_Chr1_+_21167565_21167565 2.04 AT1G56510.1
WRR4
Disease resistance protein (TIR-NBS-LRR class)
arTal_v1_Chr1_-_27940309_27940369 2.04 AT1G74310.1
AT1G74310.2
HSP101
heat shock protein 101
arTal_v1_Chr1_+_15976805_15976805 2.04 AT1G42550.1
PMI1
plastid movement impaired1
arTal_v1_Chr3_+_5243432_5243432 2.03 AT3G15510.1
NAC2
NAC domain containing protein 2
arTal_v1_Chr1_+_3161832_3161832 2.03 AT1G09770.1
CDC5
cell division cycle 5
arTal_v1_Chr1_+_99865_99872 2.03 AT1G01240.4
AT1G01240.2
AT1G01240.1
AT1G01240.3
AT1G01240.5
AT1G01240
transmembrane protein
arTal_v1_Chr1_+_23952133_23952133 2.03 AT1G64490.1
AT1G64490
DEK, chromatin associated protein
arTal_v1_Chr2_+_7821585_7821585 2.02 AT2G17972.1
AT2G17972
transmembrane protein
arTal_v1_Chr5_+_16711042_16711042 2.02 AT5G41761.1
AT5G41761
hypothetical protein
arTal_v1_Chr5_+_6802282_6802282 2.01 AT5G20150.1
SPX1
SPX domain-containing protein 1
arTal_v1_Chr1_+_22557168_22557168 2.00 AT1G61190.4
AT1G61190
LRR and NB-ARC domains-containing disease resistance protein
arTal_v1_Chr5_+_1372134_1372169 2.00 AT5G04750.1
AT5G04750.2
AT5G04750
F1F0-ATPase inhibitor protein
arTal_v1_Chr1_-_6860376_6860563 1.99 AT1G19835.1
AT1G19835.4
AT1G19835.6
AT1G19835.3
AT1G19835
filament-like protein (DUF869)
arTal_v1_Chr5_+_8365601_8365601 1.98 AT5G24490.1
AT5G24490
30S ribosomal protein
arTal_v1_Chr5_+_5995323_5995323 1.97 AT5G18130.1
AT5G18130
transmembrane protein
arTal_v1_Chr2_-_7748502_7748502 1.97 AT2G17820.1
HK1
histidine kinase 1
arTal_v1_Chr5_+_3157694_3157786 1.96 AT5G10100.1
AT5G10100.3
AT5G10100.4
TPPI
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr3_-_18684346_18684377 1.96 AT3G50370.1
AT3G50370.2
AT3G50370
hypothetical protein
arTal_v1_Chr1_-_11079240_11079289 1.96 AT1G31050.8
AT1G31050.7
AT1G31050.4
AT1G31050.6
AT1G31050.5
AT1G31050.3
AT1G31050.2
AT1G31050.1
AT1G31050
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr2_+_14529558_14529558 1.95 AT2G34460.1
AT2G34460
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr3_-_18898647_18898680 1.94 AT3G50840.3
AT3G50840.1
AT3G50840
Phototropic-responsive NPH3 family protein
arTal_v1_Chr1_-_20731289_20731356 1.94 AT1G55530.3
AT1G55530.2
AT1G55530.1
AT1G55530
RING/U-box superfamily protein
arTal_v1_Chr3_-_9632009_9632145 1.94 AT3G26280.1
AT3G26280.2
CYP71B4
cytochrome P450, family 71, subfamily B, polypeptide 4
arTal_v1_Chr4_-_11732674_11732674 1.93 AT4G22150.1
PUX3
UBA/UBX domain protein
arTal_v1_Chr3_+_188321_188384 1.93 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
arTal_v1_Chr5_-_642026_642030 1.93 AT5G02810.1
AT5G02810.2
PRR7
pseudo-response regulator 7
arTal_v1_Chr4_-_17559104_17559104 1.92 AT4G37310.1
CYP81H1
cytochrome P450, family 81, subfamily H, polypeptide 1
arTal_v1_Chr5_+_15843881_15843959 1.92 AT5G39570.1
AT5G39570.2
AT5G39570
transmembrane protein
arTal_v1_Chr5_+_23524130_23524130 1.92 AT5G58140.7
AT5G58140.6
AT5G58140.1
PHOT2
phototropin 2
arTal_v1_Chr5_+_648648_648706 1.92 AT5G02840.3
AT5G02840.1
AT5G02840.5
AT5G02840.2
AT5G02840.4
LCL1
LHY/CCA1-like 1
arTal_v1_Chr5_+_5237970_5238178 1.91 AT5G16030.1
AT5G16030.4
AT5G16030.2
AT5G16030.3
AT5G16030
mental retardation GTPase activating protein
arTal_v1_Chr1_-_24217436_24217436 1.91 AT1G65190.1
AT1G65190
Protein kinase superfamily protein
arTal_v1_Chr1_-_4679594_4679594 1.90 AT1G13640.2
AT1G13640
Phosphatidylinositol 3- and 4-kinase family protein
arTal_v1_Chr5_+_22681238_22681238 1.90 AT5G56010.1
HSP81-3
heat shock protein 81-3
arTal_v1_Chr1_-_4365414_4365414 1.90 AT1G12800.1
AT1G12800
Nucleic acid-binding, OB-fold-like protein
arTal_v1_Chr3_-_6172005_6172005 1.89 AT3G18035.1
AT3G18035.2
HON4
winged-helix DNA-binding transcription factor family protein
arTal_v1_Chr4_-_7322510_7322510 1.89 AT4G12340.1
AT4G12340
copper ion binding protein
arTal_v1_Chr1_+_2152798_2152880 1.89 AT1G07010.1
AT1G07010.2
AT1G07010.3
SLP1
Calcineurin-like metallo-phosphoesterase superfamily protein
arTal_v1_Chr1_+_18870059_18870059 1.88 AT1G50920.1
AT1G50920
Nucleolar GTP-binding protein
arTal_v1_Chr3_+_21516635_21516745 1.88 AT3G58110.1
AT3G58110.2
AT3G58110
hypothetical protein
arTal_v1_Chr2_+_19269558_19269558 1.88 AT2G46900.1
AT2G46900
transcription factor-like protein
arTal_v1_Chr5_+_25537074_25537074 1.88 AT5G63810.1
BGAL10
beta-galactosidase 10
arTal_v1_Chr1_-_6283348_6283348 1.88 AT1G18265.1
AT1G18265
zein-binding protein (Protein of unknown function, DUF593)
arTal_v1_Chr3_+_7789901_7789993 1.88 AT3G22104.2
AT3G22104.3
AT3G22104
Phototropic-responsive NPH3 family protein
arTal_v1_Chr5_+_25969190_25969190 1.88 AT5G65010.2
ASN2
asparagine synthetase 2
arTal_v1_Chr1_+_25964319_25964319 1.87 AT1G69060.1
AT1G69060
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr5_+_25969035_25969035 1.87 AT5G65010.1
ASN2
asparagine synthetase 2
arTal_v1_Chr1_-_26770175_26770177 1.87 AT1G71000.1
AT1G71000.2
AT1G71000
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr5_+_16915728_16915728 1.87 AT5G42310.1
AT5G42310
Pentatricopeptide repeat (PPR-like) superfamily protein
arTal_v1_Chr1_-_22382422_22382422 1.87 AT1G60790.1
TBL2
trichome birefringence-like protein (DUF828)
arTal_v1_Chr2_-_8206478_8206478 1.87 AT2G18940.1
AT2G18940
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_-_16861527_16861529 1.87 AT3G45850.1
AT3G45850.2
AT3G45850
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr1_+_19996205_19996205 1.86 AT1G53590.1
NTMC2T6.1
Calcium-dependent lipid-binding (CaLB domain) family protein
arTal_v1_Chr5_+_6718206_6718206 1.86 AT5G19875.1
AT5G19875
transmembrane protein
arTal_v1_Chr5_+_26448938_26448955 1.86 AT5G66180.1
AT5G66180.2
AT5G66180.3
AT5G66180
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr4_+_14073008_14073042 1.85 AT4G28480.1
AT4G28480.2
AT4G28480
DNAJ heat shock family protein
arTal_v1_Chr2_+_505375_505375 1.85 AT2G02070.1
AT2G02070.2
IDD5
indeterminate(ID)-domain 5
arTal_v1_Chr1_+_480650_480650 1.85 AT1G02390.1
GPAT2
glycerol-3-phosphate acyltransferase 2
arTal_v1_Chr1_-_467873_467880 1.85 AT1G02340.2
AT1G02340.1
HFR1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr3_-_1044678_1044813 1.85 AT3G04030.2
AT3G04030.5
AT3G04030.1
AT3G04030.3
MYR2
Homeodomain-like superfamily protein
arTal_v1_Chr3_+_20479121_20479121 1.85 AT3G55250.1
PDE329
calcium homeostasis regulator
arTal_v1_Chr4_+_1321758_1321843 1.84 AT4G02990.1
AT4G02990.2
BSM
Mitochondrial transcription termination factor family protein
arTal_v1_Chr1_+_5249760_5249760 1.84 AT1G15260.1
AT1G15260
LOW protein: ATP-dependent RNA helicase-like protein
arTal_v1_Chr5_+_22686832_22686832 1.83 AT5G56030.2
HSP81-2
heat shock protein 81-2
arTal_v1_Chr2_+_1076863_1076863 1.82 AT2G03550.1
AT2G03550
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_+_21317130_21317140 1.82 AT5G52530.3
AT5G52530.2
AT5G52530.1
AT5G52530
dentin sialophosphoprotein-like protein
arTal_v1_Chr5_+_22686473_22686473 1.82 AT5G56030.1
HSP81-2
heat shock protein 81-2
arTal_v1_Chr4_-_11648644_11648644 1.82 AT4G21960.1
PRXR1
Peroxidase superfamily protein
arTal_v1_Chr1_-_130570_130577 1.82 AT1G01320.1
AT1G01320.3
AT1G01320.2
AT1G01320
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_+_11479763_11479763 1.82 AT1G31970.1
STRS1
DEA(D/H)-box RNA helicase family protein
arTal_v1_Chr1_+_8117732_8117732 1.82 AT1G22930.2
AT1G22930
T-complex protein 11
arTal_v1_Chr4_-_9488397_9488397 1.81 AT4G16870.1
AT4G16870

arTal_v1_Chr5_+_3261149_3261149 1.81 AT5G10370.1
AT5G10370
helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein
arTal_v1_Chr3_-_5411153_5411153 1.81 AT3G15970.1
AT3G15970.2
AT3G15970
NUP50 (Nucleoporin 50 kDa) protein
arTal_v1_Chr2_-_16833294_16833294 1.81 AT2G40300.1
FER4
ferritin 4
arTal_v1_Chr5_+_21661444_21661444 1.81 AT5G53400.1
BOB1
HSP20-like chaperones superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G16820

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.6 9.9 GO:0009413 response to flooding(GO:0009413)
1.1 6.6 GO:0055129 L-proline biosynthetic process(GO:0055129)
1.1 5.4 GO:0032413 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
1.0 5.0 GO:0031022 nuclear migration along microfilament(GO:0031022)
1.0 3.0 GO:0006883 cellular sodium ion homeostasis(GO:0006883)
1.0 3.9 GO:0000023 maltose metabolic process(GO:0000023)
0.9 2.7 GO:0045857 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.9 0.9 GO:1902583 intracellular transport of virus(GO:0075733) multi-organism intracellular transport(GO:1902583)
0.9 2.6 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.8 3.4 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.8 3.3 GO:0080093 regulation of photorespiration(GO:0080093)
0.8 3.3 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.8 2.4 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.8 3.1 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.8 8.5 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.8 2.3 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.7 3.0 GO:1900109 histone H3-K9 dimethylation(GO:0036123) regulation of histone H3-K9 dimethylation(GO:1900109)
0.7 2.2 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.7 2.2 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.7 2.1 GO:0046704 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.7 2.8 GO:0050878 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.7 7.1 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.7 2.1 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.7 2.1 GO:0010343 singlet oxygen-mediated programmed cell death(GO:0010343)
0.7 2.0 GO:0030970 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.7 2.0 GO:0032025 response to cobalt ion(GO:0032025)
0.7 2.0 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.7 2.0 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.6 1.3 GO:0033306 phytol metabolic process(GO:0033306)
0.6 4.5 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.6 5.7 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.6 2.5 GO:0006741 NADP biosynthetic process(GO:0006741)
0.6 3.7 GO:0070981 L-asparagine biosynthetic process(GO:0070981) L-asparagine metabolic process(GO:0070982)
0.6 1.2 GO:1901336 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.6 4.3 GO:0090059 protoxylem development(GO:0090059)
0.6 1.8 GO:0048832 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.6 1.8 GO:0051297 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
0.6 7.7 GO:0009608 response to symbiont(GO:0009608)
0.6 2.4 GO:0071494 cellular response to UV-C(GO:0071494)
0.6 2.9 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.6 2.3 GO:0007032 endosome organization(GO:0007032)
0.6 0.6 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.6 1.7 GO:0009663 plasmodesma organization(GO:0009663)
0.6 2.3 GO:0045922 negative regulation of fatty acid metabolic process(GO:0045922)
0.6 3.4 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.6 1.7 GO:0080152 regulation of photosynthesis, dark reaction(GO:0010110) cellular response to anoxia(GO:0071454) regulation of reductive pentose-phosphate cycle(GO:0080152) negative regulation of reductive pentose-phosphate cycle(GO:0080153)
0.6 5.0 GO:0071490 cellular response to far red light(GO:0071490)
0.6 1.7 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.6 2.2 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.6 1.7 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.6 1.7 GO:1902586 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.5 2.7 GO:0000084 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.5 1.6 GO:0042766 nucleosome mobilization(GO:0042766)
0.5 1.6 GO:0009660 amyloplast organization(GO:0009660)
0.5 0.5 GO:0018377 N-terminal protein lipidation(GO:0006498) N-terminal protein myristoylation(GO:0006499) protein myristoylation(GO:0018377)
0.5 2.6 GO:0019419 sulfate reduction(GO:0019419)
0.5 2.0 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.5 2.5 GO:0007041 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.5 3.0 GO:1902326 positive regulation of chlorophyll biosynthetic process(GO:1902326)
0.5 1.5 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.5 1.5 GO:0010792 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.5 14.5 GO:0042026 protein refolding(GO:0042026)
0.5 2.4 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.5 1.4 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.5 4.8 GO:0043462 regulation of ATPase activity(GO:0043462)
0.5 1.4 GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.5 1.9 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.5 2.3 GO:0051098 regulation of binding(GO:0051098)
0.5 3.7 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.5 3.7 GO:0031936 negative regulation of chromatin silencing(GO:0031936)
0.5 1.4 GO:0001738 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.4 1.3 GO:0031054 pre-miRNA processing(GO:0031054)
0.4 1.3 GO:0071217 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217)
0.4 1.7 GO:0097298 regulation of nucleus size(GO:0097298)
0.4 2.6 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.4 2.2 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.4 1.7 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.4 1.7 GO:0016598 protein arginylation(GO:0016598)
0.4 2.1 GO:0006482 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.4 1.7 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.4 0.8 GO:0070827 cellular component maintenance(GO:0043954) chromatin maintenance(GO:0070827)
0.4 2.1 GO:0010390 histone monoubiquitination(GO:0010390)
0.4 1.3 GO:0048255 mRNA stabilization(GO:0048255)
0.4 2.1 GO:0046713 borate transport(GO:0046713)
0.4 2.8 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.4 0.4 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.4 1.6 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.4 0.4 GO:0009745 sucrose mediated signaling(GO:0009745)
0.4 0.8 GO:0034982 mitochondrial protein processing(GO:0034982)
0.4 12.0 GO:0006012 galactose metabolic process(GO:0006012)
0.4 2.3 GO:0035335 peptidyl-tyrosine dephosphorylation(GO:0035335)
0.4 2.7 GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.4 4.9 GO:0010375 stomatal complex patterning(GO:0010375)
0.4 0.8 GO:0051647 nuclear migration(GO:0007097) establishment of nucleus localization(GO:0040023) nucleus localization(GO:0051647)
0.4 1.1 GO:0090615 mitochondrial mRNA processing(GO:0090615)
0.4 4.5 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.4 1.5 GO:0072718 response to cisplatin(GO:0072718)
0.4 6.2 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.4 4.7 GO:0042793 transcription from plastid promoter(GO:0042793)
0.4 2.5 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.4 1.1 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.4 4.3 GO:0060260 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.4 1.4 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.4 1.1 GO:1902407 assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) phragmoplast assembly(GO:0000914) assembly of actomyosin apparatus involved in mitotic cytokinesis(GO:1902407)
0.4 1.8 GO:0031507 heterochromatin assembly(GO:0031507)
0.3 2.7 GO:0006376 mRNA splice site selection(GO:0006376)
0.3 3.1 GO:0009942 longitudinal axis specification(GO:0009942)
0.3 1.7 GO:0019323 pentose catabolic process(GO:0019323)
0.3 2.4 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.3 1.0 GO:0009093 cysteine catabolic process(GO:0009093)
0.3 5.6 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.3 5.9 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.3 1.6 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.3 1.0 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.3 1.0 GO:0080183 response to photooxidative stress(GO:0080183)
0.3 15.3 GO:0016145 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.3 14.3 GO:0010286 heat acclimation(GO:0010286)
0.3 1.0 GO:0033523 histone H2B ubiquitination(GO:0033523)
0.3 0.9 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.3 1.9 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.3 0.9 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.3 4.3 GO:0048564 photosystem I assembly(GO:0048564)
0.3 4.9 GO:0016117 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.3 0.6 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.3 13.2 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.3 5.1 GO:0000373 Group II intron splicing(GO:0000373)
0.3 0.9 GO:1990884 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.3 0.9 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.3 2.4 GO:0044375 regulation of peroxisome size(GO:0044375)
0.3 0.9 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.3 1.5 GO:0010508 positive regulation of autophagy(GO:0010508)
0.3 1.8 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.3 3.2 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.3 1.7 GO:0006624 vacuolar protein processing(GO:0006624)
0.3 2.6 GO:0000913 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.3 1.2 GO:0051415 interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418)
0.3 1.7 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.3 1.4 GO:0010155 regulation of proton transport(GO:0010155)
0.3 0.8 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.3 0.3 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.3 0.8 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.3 1.0 GO:0006145 purine nucleobase catabolic process(GO:0006145)
0.3 0.8 GO:0009233 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
0.3 1.3 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.3 6.4 GO:0009585 phototransduction(GO:0007602) red, far-red light phototransduction(GO:0009585)
0.3 2.0 GO:0043486 histone exchange(GO:0043486)
0.3 2.0 GO:0034644 cellular response to UV(GO:0034644)
0.3 7.4 GO:0016226 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.3 3.0 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.3 2.0 GO:0006821 chloride transport(GO:0006821)
0.3 0.8 GO:0016124 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.3 1.0 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.3 1.3 GO:0030242 pexophagy(GO:0030242)
0.2 0.7 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.2 13.1 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.2 7.4 GO:0034728 nucleosome organization(GO:0034728)
0.2 0.7 GO:0010288 response to lead ion(GO:0010288)
0.2 2.4 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.2 1.0 GO:0048480 style development(GO:0048479) stigma development(GO:0048480)
0.2 0.7 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.2 1.4 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.2 0.7 GO:0045694 regulation of embryo sac egg cell differentiation(GO:0045694)
0.2 3.3 GO:0010076 maintenance of floral meristem identity(GO:0010076)
0.2 1.2 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.2 2.1 GO:0032844 regulation of homeostatic process(GO:0032844)
0.2 3.7 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.2 1.2 GO:0010731 protein glutathionylation(GO:0010731)
0.2 0.5 GO:0045793 positive regulation of cell size(GO:0045793)
0.2 11.0 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.2 7.3 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.2 2.1 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.2 13.3 GO:0009644 response to high light intensity(GO:0009644)
0.2 1.1 GO:0043489 RNA stabilization(GO:0043489)
0.2 2.2 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.2 0.7 GO:0036292 DNA rewinding(GO:0036292) replication fork protection(GO:0048478)
0.2 0.7 GO:0010219 regulation of vernalization response(GO:0010219)
0.2 0.9 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.2 1.1 GO:0018210 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.2 4.1 GO:0010207 photosystem II assembly(GO:0010207)
0.2 1.5 GO:0046085 adenosine metabolic process(GO:0046085)
0.2 0.9 GO:0006775 fat-soluble vitamin metabolic process(GO:0006775) vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360) fat-soluble vitamin biosynthetic process(GO:0042362)
0.2 1.7 GO:0030835 negative regulation of actin filament depolymerization(GO:0030835) actin filament capping(GO:0051693)
0.2 1.4 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.2 0.4 GO:0000706 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.2 1.2 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.2 3.5 GO:0009638 phototropism(GO:0009638)
0.2 1.2 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.2 0.2 GO:0043478 pigmentation(GO:0043473) pigment accumulation(GO:0043476) pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.2 0.8 GO:0035279 mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795)
0.2 0.8 GO:0015669 gas transport(GO:0015669)
0.2 0.6 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.2 3.2 GO:1900865 chloroplast RNA modification(GO:1900865)
0.2 1.0 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.2 2.7 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.2 2.1 GO:0031425 chloroplast RNA processing(GO:0031425)
0.2 1.5 GO:0051646 mitochondrion localization(GO:0051646)
0.2 1.2 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.2 1.2 GO:0071586 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.2 0.6 GO:0051447 negative regulation of meiotic nuclear division(GO:0045835) negative regulation of meiotic cell cycle(GO:0051447)
0.2 0.9 GO:0070861 regulation of protein exit from endoplasmic reticulum(GO:0070861) positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.2 2.4 GO:0010540 basipetal auxin transport(GO:0010540)
0.2 5.4 GO:0071489 red or far-red light signaling pathway(GO:0010017) cellular response to red or far red light(GO:0071489)
0.2 0.7 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.2 0.6 GO:0060919 auxin influx(GO:0060919)
0.2 1.3 GO:0006751 glutathione catabolic process(GO:0006751)
0.2 0.9 GO:0015074 DNA integration(GO:0015074)
0.2 0.7 GO:0010047 fruit dehiscence(GO:0010047)
0.2 2.7 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.2 0.7 GO:0048205 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.2 0.5 GO:0019279 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.2 1.2 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.2 0.5 GO:0070207 protein homotrimerization(GO:0070207)
0.2 1.1 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.2 0.5 GO:0046203 spermidine catabolic process(GO:0046203)
0.2 1.7 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.2 11.4 GO:0007018 microtubule-based movement(GO:0007018)
0.2 0.3 GO:2000036 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.2 2.4 GO:0009098 leucine biosynthetic process(GO:0009098)
0.2 2.0 GO:0071483 cellular response to blue light(GO:0071483)
0.2 0.8 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.2 1.8 GO:0006526 arginine biosynthetic process(GO:0006526)
0.2 0.8 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.2 0.7 GO:1901672 positive regulation of systemic acquired resistance(GO:1901672)
0.2 1.6 GO:0033619 membrane protein proteolysis(GO:0033619)
0.2 5.4 GO:0010114 response to red light(GO:0010114)
0.2 2.3 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.2 1.6 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.2 1.3 GO:0043044 ATP-dependent chromatin remodeling(GO:0043044)
0.2 1.1 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.2 1.1 GO:0000055 ribosomal large subunit export from nucleus(GO:0000055)
0.2 0.8 GO:0007142 male meiosis II(GO:0007142)
0.2 0.5 GO:0019354 siroheme biosynthetic process(GO:0019354) siroheme metabolic process(GO:0046156)
0.2 1.0 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.2 0.5 GO:0055047 generative cell mitosis(GO:0055047)
0.2 0.5 GO:0030100 regulation of endocytosis(GO:0030100)
0.2 1.3 GO:0010206 photosystem II repair(GO:0010206)
0.2 2.3 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.2 1.1 GO:0010067 procambium histogenesis(GO:0010067)
0.2 2.4 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.2 1.4 GO:0071333 cellular response to glucose stimulus(GO:0071333)
0.2 1.5 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.1 0.6 GO:0001578 microtubule bundle formation(GO:0001578)
0.1 0.4 GO:0042353 fucose biosynthetic process(GO:0042353)
0.1 0.9 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
0.1 0.7 GO:0032012 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.1 0.3 GO:0016574 histone ubiquitination(GO:0016574)
0.1 1.2 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.1 2.6 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.1 3.8 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.1 1.0 GO:0019632 shikimate metabolic process(GO:0019632)
0.1 1.3 GO:0060866 leaf abscission(GO:0060866)
0.1 0.4 GO:0070297 regulation of ethylene-activated signaling pathway(GO:0010104) regulation of phosphorelay signal transduction system(GO:0070297)
0.1 4.4 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.1 0.7 GO:0016559 peroxisome fission(GO:0016559)
0.1 2.0 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.1 0.4 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 0.8 GO:0071244 cellular response to carbon dioxide(GO:0071244)
0.1 0.1 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.1 1.0 GO:0043090 amino acid export(GO:0032973) amino acid import(GO:0043090)
0.1 0.6 GO:1902916 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.1 0.3 GO:0040014 multicellular organism growth(GO:0035264) regulation of multicellular organism growth(GO:0040014)
0.1 0.3 GO:0045833 negative regulation of lipid metabolic process(GO:0045833) negative regulation of lipid biosynthetic process(GO:0051055)
0.1 1.5 GO:0000002 mitochondrial genome maintenance(GO:0000002)
0.1 0.3 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.1 2.9 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.1 0.7 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.1 0.4 GO:0071042 U1 snRNA 3'-end processing(GO:0034473) U5 snRNA 3'-end processing(GO:0034476) nuclear polyadenylation-dependent mRNA catabolic process(GO:0071042) polyadenylation-dependent mRNA catabolic process(GO:0071047)
0.1 0.4 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.1 0.5 GO:0015693 magnesium ion transport(GO:0015693)
0.1 1.9 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.1 2.5 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.1 2.8 GO:0015994 chlorophyll metabolic process(GO:0015994)
0.1 1.5 GO:0006898 receptor-mediated endocytosis(GO:0006898)
0.1 1.1 GO:0009880 embryonic pattern specification(GO:0009880)
0.1 0.3 GO:0051294 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.1 2.2 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.1 1.6 GO:0072505 divalent inorganic anion homeostasis(GO:0072505)
0.1 0.6 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.1 2.7 GO:0060429 epithelium development(GO:0060429)
0.1 0.6 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.1 0.8 GO:0055070 copper ion homeostasis(GO:0055070)
0.1 9.0 GO:0009615 response to virus(GO:0009615)
0.1 0.5 GO:0006296 nucleotide-excision repair, DNA incision, 5'-to lesion(GO:0006296)
0.1 0.4 GO:1902183 shoot apical meristem development(GO:1902182) regulation of shoot apical meristem development(GO:1902183)
0.1 0.4 GO:0009107 lipoate biosynthetic process(GO:0009107)
0.1 1.6 GO:0030497 fatty acid elongation(GO:0030497)
0.1 0.6 GO:0006106 fumarate metabolic process(GO:0006106)
0.1 2.1 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.1 1.3 GO:1990069 stomatal opening(GO:1990069)
0.1 1.1 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.1 0.4 GO:0016444 somatic cell DNA recombination(GO:0016444)
0.1 2.3 GO:0010091 trichome branching(GO:0010091)
0.1 5.1 GO:0002181 cytoplasmic translation(GO:0002181)
0.1 0.1 GO:0046505 sulfolipid metabolic process(GO:0046505) sulfolipid biosynthetic process(GO:0046506)
0.1 2.7 GO:0009637 response to blue light(GO:0009637)
0.1 1.0 GO:0070129 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.1 2.3 GO:0008356 asymmetric cell division(GO:0008356)
0.1 1.2 GO:0002683 negative regulation of immune system process(GO:0002683)
0.1 0.7 GO:0042391 regulation of membrane potential(GO:0042391)
0.1 0.3 GO:0000972 transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000972) protein localization to nuclear envelope(GO:0090435)
0.1 0.3 GO:0060862 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.1 0.4 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 3.8 GO:0006749 glutathione metabolic process(GO:0006749)
0.1 0.5 GO:0001522 pseudouridine synthesis(GO:0001522)
0.1 1.8 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.1 0.4 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 1.9 GO:0098754 detoxification(GO:0098754)
0.1 4.2 GO:0006418 tRNA aminoacylation for protein translation(GO:0006418)
0.1 3.4 GO:0043547 positive regulation of GTPase activity(GO:0043547)
0.1 1.6 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.1 1.8 GO:0051260 protein homooligomerization(GO:0051260)
0.1 2.5 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.1 0.3 GO:1901656 glycoside transport(GO:1901656)
0.1 0.4 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.1 0.7 GO:0034475 nuclear-transcribed mRNA catabolic process, exonucleolytic(GO:0000291) nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'(GO:0034427) U4 snRNA 3'-end processing(GO:0034475) nuclear mRNA surveillance(GO:0071028) polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.1 1.7 GO:0051084 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.1 0.3 GO:0070212 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.1 0.6 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.1 0.8 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 1.0 GO:0036065 fucosylation(GO:0036065)
0.1 0.2 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.1 2.2 GO:0006338 chromatin remodeling(GO:0006338)
0.1 1.0 GO:0010088 phloem development(GO:0010088)
0.1 0.4 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.1 0.7 GO:0042128 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.1 0.3 GO:0043982 histone H4-K8 acetylation(GO:0043982)
0.1 0.3 GO:0006747 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.1 4.6 GO:0016036 cellular response to phosphate starvation(GO:0016036)
0.1 4.8 GO:0009827 plant-type cell wall modification(GO:0009827)
0.1 0.3 GO:0080058 protein deglutathionylation(GO:0080058)
0.1 0.4 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.1 1.0 GO:0006265 DNA topological change(GO:0006265)
0.1 1.1 GO:0015706 nitrate transport(GO:0015706)
0.1 0.3 GO:0034247 snoRNA splicing(GO:0034247)
0.1 0.2 GO:0035970 peptidyl-threonine dephosphorylation(GO:0035970)
0.1 0.9 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.1 0.5 GO:0050821 protein stabilization(GO:0050821)
0.1 1.4 GO:0006986 response to unfolded protein(GO:0006986)
0.1 0.5 GO:0071398 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.1 0.8 GO:0034614 cellular response to reactive oxygen species(GO:0034614)
0.1 0.7 GO:0010165 response to X-ray(GO:0010165)
0.1 0.6 GO:0016553 base conversion or substitution editing(GO:0016553) cytidine to uridine editing(GO:0016554)
0.1 2.4 GO:0034599 cellular response to oxidative stress(GO:0034599)
0.1 1.5 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 0.4 GO:0071715 icosanoid secretion(GO:0032309) acid secretion(GO:0046717) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.1 0.8 GO:0010052 guard cell differentiation(GO:0010052)
0.1 1.0 GO:0000338 protein deneddylation(GO:0000338)
0.1 1.4 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.1 1.5 GO:0030042 actin filament depolymerization(GO:0030042)
0.1 0.4 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.1 0.4 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.1 0.2 GO:0016558 protein import into peroxisome matrix(GO:0016558)
0.1 0.6 GO:0033617 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.1 1.4 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.1 1.6 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 0.3 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.1 0.8 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.1 0.2 GO:0019593 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.1 0.5 GO:0010267 production of ta-siRNAs involved in RNA interference(GO:0010267)
0.1 0.8 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 1.4 GO:0043241 protein complex disassembly(GO:0043241)
0.1 0.5 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.1 0.8 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.1 0.2 GO:0042780 termination of RNA polymerase III transcription(GO:0006386) tRNA 3'-trailer cleavage(GO:0042779) tRNA 3'-end processing(GO:0042780)
0.1 1.6 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.1 1.5 GO:0007030 Golgi organization(GO:0007030)
0.1 5.2 GO:0009658 chloroplast organization(GO:0009658)
0.1 5.2 GO:0006457 protein folding(GO:0006457)
0.1 1.7 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.1 0.4 GO:0006112 glycogen metabolic process(GO:0005977) energy reserve metabolic process(GO:0006112)
0.1 0.4 GO:0015846 polyamine transport(GO:0015846)
0.1 1.7 GO:0001708 cell fate specification(GO:0001708)
0.1 1.9 GO:0006897 endocytosis(GO:0006897)
0.1 0.2 GO:0051601 exocyst localization(GO:0051601)
0.1 7.0 GO:0009408 response to heat(GO:0009408)
0.1 0.9 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.1 0.9 GO:0010187 negative regulation of seed germination(GO:0010187)
0.1 0.2 GO:0071277 cellular response to calcium ion(GO:0071277)
0.1 2.7 GO:0009631 cold acclimation(GO:0009631)
0.1 1.7 GO:0051781 positive regulation of cell division(GO:0051781)
0.1 1.7 GO:0010143 cutin biosynthetic process(GO:0010143)
0.1 0.8 GO:0032543 mitochondrial translation(GO:0032543)
0.1 1.0 GO:0046451 lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.1 0.4 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.1 1.6 GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.1 0.2 GO:0040031 snRNA modification(GO:0040031)
0.1 3.3 GO:0000209 protein polyubiquitination(GO:0000209)
0.1 0.3 GO:0009560 embryo sac egg cell differentiation(GO:0009560)
0.1 1.7 GO:0048510 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.1 1.6 GO:0072666 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.1 0.3 GO:0071265 L-methionine biosynthetic process(GO:0071265)
0.1 0.4 GO:0010167 response to nitrate(GO:0010167)
0.1 0.2 GO:1904580 regulation of intracellular mRNA localization(GO:1904580)
0.1 0.2 GO:0000012 single strand break repair(GO:0000012)
0.1 0.5 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.1 0.5 GO:1902074 response to salt(GO:1902074)
0.1 1.3 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.1 1.2 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.1 0.2 GO:0043171 peptide catabolic process(GO:0043171)
0.1 0.5 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.1 0.1 GO:0051645 Golgi localization(GO:0051645)
0.1 4.1 GO:0070646 protein modification by small protein removal(GO:0070646)
0.1 1.0 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.1 0.7 GO:0051553 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.1 1.3 GO:0042542 response to hydrogen peroxide(GO:0042542)
0.1 0.5 GO:0007584 response to nutrient(GO:0007584)
0.1 0.9 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.2 GO:0032272 negative regulation of protein polymerization(GO:0032272)
0.0 1.0 GO:0042176 regulation of protein catabolic process(GO:0042176)
0.0 0.6 GO:0035196 production of miRNAs involved in gene silencing by miRNA(GO:0035196)
0.0 1.2 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 1.8 GO:0016128 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.0 0.2 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.3 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.6 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.4 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.0 0.3 GO:0090151 establishment of protein localization to mitochondrial membrane(GO:0090151)
0.0 1.0 GO:0009958 positive gravitropism(GO:0009958)
0.0 0.6 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.0 0.2 GO:0010014 meristem initiation(GO:0010014)
0.0 2.3 GO:0007623 circadian rhythm(GO:0007623) rhythmic process(GO:0048511)
0.0 2.2 GO:0009627 systemic acquired resistance(GO:0009627)
0.0 0.8 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.0 0.3 GO:0006308 DNA catabolic process(GO:0006308)
0.0 0.5 GO:0010182 carbohydrate mediated signaling(GO:0009756) sugar mediated signaling pathway(GO:0010182)
0.0 0.5 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 1.3 GO:0048481 plant ovule development(GO:0048481)
0.0 0.7 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.0 0.2 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 1.2 GO:0072599 protein targeting to ER(GO:0045047) establishment of protein localization to endoplasmic reticulum(GO:0072599)
0.0 12.1 GO:0043043 translation(GO:0006412) peptide biosynthetic process(GO:0043043)
0.0 0.2 GO:2000034 regulation of seed maturation(GO:2000034)
0.0 0.8 GO:0050826 response to freezing(GO:0050826)
0.0 0.7 GO:0019216 regulation of lipid metabolic process(GO:0019216)
0.0 0.7 GO:0007093 mitotic cell cycle checkpoint(GO:0007093)
0.0 0.1 GO:0046125 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.0 0.4 GO:0070417 cellular response to cold(GO:0070417)
0.0 1.1 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 0.1 GO:0070601 centromeric sister chromatid cohesion(GO:0070601)
0.0 1.0 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.2 GO:0006525 arginine metabolic process(GO:0006525)
0.0 0.5 GO:0009937 regulation of gibberellic acid mediated signaling pathway(GO:0009937)
0.0 0.9 GO:0031124 mRNA 3'-end processing(GO:0031124)
0.0 0.2 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.0 13.2 GO:0016567 protein ubiquitination(GO:0016567)
0.0 0.6 GO:0009959 negative gravitropism(GO:0009959)
0.0 1.4 GO:0006305 DNA alkylation(GO:0006305) DNA methylation(GO:0006306)
0.0 0.1 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.0 0.7 GO:0009630 gravitropism(GO:0009630)
0.0 0.5 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.5 GO:0022611 seed dormancy process(GO:0010162) dormancy process(GO:0022611)
0.0 0.2 GO:0071428 ribosomal subunit export from nucleus(GO:0000054) ribosome localization(GO:0033750) establishment of ribosome localization(GO:0033753) rRNA-containing ribonucleoprotein complex export from nucleus(GO:0071428)
0.0 0.3 GO:0005983 starch catabolic process(GO:0005983)
0.0 3.8 GO:0045944 positive regulation of transcription from RNA polymerase II promoter(GO:0045944)
0.0 0.5 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.0 0.6 GO:0010075 regulation of meristem growth(GO:0010075)
0.0 0.5 GO:0010215 cellulose microfibril organization(GO:0010215)
0.0 0.2 GO:0051503 adenine nucleotide transport(GO:0051503)
0.0 0.9 GO:0035304 regulation of dephosphorylation(GO:0035303) regulation of protein dephosphorylation(GO:0035304)
0.0 0.3 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.0 GO:1903313 positive regulation of RNA splicing(GO:0033120) positive regulation of mRNA processing(GO:0050685) positive regulation of mRNA metabolic process(GO:1903313)
0.0 0.5 GO:0006744 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.0 0.3 GO:0009636 response to toxic substance(GO:0009636)
0.0 0.4 GO:0055074 cellular calcium ion homeostasis(GO:0006874) calcium ion homeostasis(GO:0055074)
0.0 0.4 GO:0052542 defense response by callose deposition(GO:0052542)
0.0 0.1 GO:0006469 negative regulation of protein phosphorylation(GO:0001933) negative regulation of protein kinase activity(GO:0006469) negative regulation of phosphorus metabolic process(GO:0010563) negative regulation of kinase activity(GO:0033673) negative regulation of phosphorylation(GO:0042326) negative regulation of phosphate metabolic process(GO:0045936)
0.0 0.1 GO:0006552 leucine catabolic process(GO:0006552)
0.0 0.3 GO:0051274 beta-glucan biosynthetic process(GO:0051274)
0.0 0.4 GO:0090305 nucleic acid phosphodiester bond hydrolysis(GO:0090305)
0.0 0.4 GO:0009749 response to glucose(GO:0009749)
0.0 0.6 GO:0010087 phloem or xylem histogenesis(GO:0010087)
0.0 0.2 GO:0045851 pH reduction(GO:0045851)
0.0 0.8 GO:0000380 alternative mRNA splicing, via spliceosome(GO:0000380)
0.0 0.3 GO:0016556 mRNA modification(GO:0016556)
0.0 1.9 GO:0042254 ribosome biogenesis(GO:0042254)
0.0 0.1 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.3 GO:0006754 ATP biosynthetic process(GO:0006754) purine nucleoside triphosphate biosynthetic process(GO:0009145) purine ribonucleoside triphosphate biosynthetic process(GO:0009206) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.0 0.1 GO:0006047 UDP-N-acetylglucosamine metabolic process(GO:0006047) UDP-N-acetylglucosamine biosynthetic process(GO:0006048) amino sugar biosynthetic process(GO:0046349)
0.0 0.2 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.3 GO:0051510 regulation of unidimensional cell growth(GO:0051510)
0.0 0.4 GO:0034504 protein import into nucleus(GO:0006606) protein localization to nucleus(GO:0034504) protein targeting to nucleus(GO:0044744)
0.0 0.2 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.1 GO:0046471 phosphatidylglycerol metabolic process(GO:0046471)
0.0 2.4 GO:0046777 protein autophosphorylation(GO:0046777)
0.0 0.1 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.0 2.3 GO:0051254 positive regulation of RNA metabolic process(GO:0051254)
0.0 0.1 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.0 GO:0019365 pyridine nucleotide salvage(GO:0019365)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 2.2 GO:0008278 cohesin complex(GO:0008278)
0.7 2.1 GO:0016328 lateral plasma membrane(GO:0016328)
0.6 1.8 GO:0005814 centrosome(GO:0005813) centriole(GO:0005814)
0.5 2.6 GO:0010007 magnesium chelatase complex(GO:0010007)
0.5 3.1 GO:0009360 DNA polymerase III complex(GO:0009360)
0.5 1.5 GO:0033281 TAT protein transport complex(GO:0033281)
0.5 5.3 GO:0031519 PcG protein complex(GO:0031519)
0.5 2.8 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.5 1.4 GO:0030093 chloroplast photosystem I(GO:0030093)
0.4 1.3 GO:0033290 eukaryotic 48S preinitiation complex(GO:0033290)
0.4 1.7 GO:0008274 gamma-tubulin large complex(GO:0000931) gamma-tubulin ring complex(GO:0008274)
0.4 6.7 GO:0033202 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.4 1.6 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.4 1.5 GO:0032807 DNA ligase IV complex(GO:0032807)
0.4 2.3 GO:0005677 chromatin silencing complex(GO:0005677)
0.4 3.2 GO:0000813 ESCRT I complex(GO:0000813)
0.4 1.4 GO:0031515 tRNA (m1A) methyltransferase complex(GO:0031515)
0.4 2.5 GO:0030897 HOPS complex(GO:0030897)
0.4 8.4 GO:0005871 kinesin complex(GO:0005871)
0.3 5.4 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.3 2.9 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.3 1.3 GO:0034271 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.3 1.9 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.3 3.0 GO:0031209 SCAR complex(GO:0031209)
0.3 2.4 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.3 2.1 GO:0016363 nuclear matrix(GO:0016363)
0.3 1.4 GO:0005960 glycine cleavage complex(GO:0005960)
0.3 4.6 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.3 0.8 GO:0005846 nuclear cap binding complex(GO:0005846)
0.3 2.8 GO:0017119 Golgi transport complex(GO:0017119)
0.3 1.9 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.3 1.4 GO:0034426 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.3 2.2 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.3 3.7 GO:0000786 nucleosome(GO:0000786)
0.3 1.6 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.3 2.1 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.3 2.1 GO:0009538 photosystem I reaction center(GO:0009538)
0.3 2.3 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.3 2.8 GO:0030904 retromer complex(GO:0030904)
0.3 0.8 GO:0005652 nuclear lamina(GO:0005652)
0.3 1.0 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.3 4.8 GO:0035097 histone methyltransferase complex(GO:0035097)
0.3 4.8 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.2 10.2 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.2 1.7 GO:0071012 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.2 1.4 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.2 2.7 GO:0030125 clathrin vesicle coat(GO:0030125)
0.2 1.1 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.2 0.8 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.2 7.5 GO:0005643 nuclear pore(GO:0005643)
0.2 1.0 GO:0034515 proteasome storage granule(GO:0034515)
0.2 1.6 GO:0089701 U2AF(GO:0089701)
0.2 0.6 GO:0005828 kinetochore microtubule(GO:0005828)
0.2 10.1 GO:0010287 plastoglobule(GO:0010287)
0.2 2.0 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.2 6.0 GO:0005875 microtubule associated complex(GO:0005875)
0.2 2.3 GO:0031977 thylakoid lumen(GO:0031977)
0.2 1.3 GO:0010369 chromocenter(GO:0010369)
0.2 0.7 GO:0030870 Mre11 complex(GO:0030870)
0.2 1.1 GO:0000796 condensin complex(GO:0000796)
0.2 1.1 GO:0035145 exon-exon junction complex(GO:0035145)
0.2 0.7 GO:0005782 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.2 2.0 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.2 1.6 GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.2 1.5 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.2 2.5 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.2 5.4 GO:0055028 cortical microtubule(GO:0055028)
0.2 9.3 GO:0009707 chloroplast outer membrane(GO:0009707)
0.2 0.5 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.2 2.6 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.2 1.9 GO:0009504 cell plate(GO:0009504)
0.2 0.6 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.2 7.1 GO:0009524 phragmoplast(GO:0009524)
0.2 10.0 GO:0031969 chloroplast membrane(GO:0031969)
0.2 0.5 GO:0009528 plastid inner membrane(GO:0009528)
0.2 0.8 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.2 4.1 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.1 0.4 GO:0097346 INO80-type complex(GO:0097346)
0.1 1.0 GO:0034399 nuclear periphery(GO:0034399)
0.1 1.5 GO:0030014 CCR4-NOT complex(GO:0030014)
0.1 0.4 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.1 0.7 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.1 1.3 GO:0010168 ER body(GO:0010168)
0.1 77.4 GO:0009532 plastid stroma(GO:0009532)
0.1 0.9 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.1 0.4 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.1 0.9 GO:0035861 site of double-strand break(GO:0035861)
0.1 1.0 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.1 0.4 GO:0005785 signal recognition particle receptor complex(GO:0005785)
0.1 2.3 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.1 1.4 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 0.6 GO:0034657 GID complex(GO:0034657)
0.1 8.5 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.1 18.5 GO:0042651 thylakoid membrane(GO:0042651)
0.1 1.9 GO:0070461 SAGA-type complex(GO:0070461)
0.1 2.3 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.1 0.3 GO:0030863 cortical cytoskeleton(GO:0030863)
0.1 2.6 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.1 1.3 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786) signal recognition particle(GO:0048500)
0.1 0.8 GO:0005787 signal peptidase complex(GO:0005787)
0.1 12.2 GO:0033643 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.1 1.0 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 0.4 GO:0071007 U2-type catalytic step 2 spliceosome(GO:0071007)
0.1 3.5 GO:0005635 nuclear envelope(GO:0005635)
0.1 20.9 GO:0009941 chloroplast envelope(GO:0009941)
0.1 0.8 GO:0010445 nuclear dicing body(GO:0010445)
0.1 0.3 GO:0070847 core mediator complex(GO:0070847)
0.1 0.3 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 0.4 GO:0032044 DSIF complex(GO:0032044)
0.1 0.7 GO:0031379 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.1 0.8 GO:0008023 transcription elongation factor complex(GO:0008023)
0.1 0.4 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.1 1.0 GO:0008180 COP9 signalosome(GO:0008180)
0.1 2.0 GO:0005762 organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762)
0.1 0.6 GO:0000974 Prp19 complex(GO:0000974)
0.1 1.0 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.1 2.2 GO:0009579 thylakoid(GO:0009579)
0.1 9.5 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.1 0.3 GO:0009574 preprophase band(GO:0009574)
0.1 0.3 GO:0005719 nuclear euchromatin(GO:0005719)
0.1 0.8 GO:0072546 ER membrane protein complex(GO:0072546)
0.1 6.9 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.1 3.1 GO:0016592 mediator complex(GO:0016592)
0.1 0.6 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 1.2 GO:0005769 early endosome(GO:0005769)
0.1 0.5 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 0.3 GO:0070505 pollen coat(GO:0070505)
0.1 0.3 GO:0009295 nucleoid(GO:0009295)
0.1 24.3 GO:0005730 nucleolus(GO:0005730)
0.1 0.4 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 0.3 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.1 1.3 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 1.0 GO:0030427 site of polarized growth(GO:0030427)
0.1 0.2 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.1 0.1 GO:0045298 tubulin complex(GO:0045298)
0.1 0.3 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.1 1.2 GO:0031201 SNARE complex(GO:0031201)
0.1 0.6 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.1 0.8 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.1 0.1 GO:0031931 TORC1 complex(GO:0031931) TORC2 complex(GO:0031932) TOR complex(GO:0038201)
0.1 1.2 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 0.6 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.1 0.3 GO:0035619 root hair tip(GO:0035619)
0.1 0.3 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.1 1.3 GO:0030117 membrane coat(GO:0030117) coated membrane(GO:0048475)
0.1 5.1 GO:0000790 nuclear chromatin(GO:0000790)
0.1 0.3 GO:0032040 small-subunit processome(GO:0032040)
0.0 2.6 GO:0016604 nuclear body(GO:0016604)
0.0 0.4 GO:0005688 U6 snRNP(GO:0005688)
0.0 1.0 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 115.4 GO:0005829 cytosol(GO:0005829)
0.0 0.2 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.1 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.0 0.6 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 137.8 GO:0009536 plastid(GO:0009536)
0.0 0.1 GO:0097196 Shu complex(GO:0097196)
0.0 1.2 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 8.3 GO:0005768 endosome(GO:0005768)
0.0 0.1 GO:0043076 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 0.2 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.0 2.1 GO:0000151 ubiquitin ligase complex(GO:0000151)
0.0 0.3 GO:0005819 spindle(GO:0005819)
0.0 0.2 GO:0042575 DNA polymerase complex(GO:0042575)
0.0 0.1 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.1 GO:0032301 MutSalpha complex(GO:0032301)
0.0 0.6 GO:0090406 pollen tube(GO:0090406)
0.0 0.1 GO:0000347 THO complex(GO:0000347)
0.0 5.6 GO:0005911 cell-cell junction(GO:0005911) plasmodesma(GO:0009506) cell junction(GO:0030054) symplast(GO:0055044)
0.0 0.6 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.1 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.9 GO:0048046 apoplast(GO:0048046)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.6 6.6 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
1.4 12.6 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
1.2 3.7 GO:0004071 aspartate-ammonia ligase activity(GO:0004071)
1.2 3.5 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
1.1 3.3 GO:0030275 LRR domain binding(GO:0030275)
1.1 3.2 GO:0070678 preprotein binding(GO:0070678)
1.1 4.3 GO:0052595 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.9 5.4 GO:0030544 Hsp70 protein binding(GO:0030544)
0.9 2.6 GO:0030941 chloroplast targeting sequence binding(GO:0030941)
0.8 5.9 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.8 3.9 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.8 8.5 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.8 3.0 GO:0080002 indole-3-acetate beta-glucosyltransferase activity(GO:0047215) UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.8 0.8 GO:0070628 proteasome binding(GO:0070628)
0.7 3.0 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.7 6.5 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.7 7.6 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.7 2.1 GO:0050502 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.7 2.0 GO:0061731 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.7 1.4 GO:0046481 digalactosyldiacylglycerol synthase activity(GO:0046481)
0.7 2.0 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.7 3.3 GO:0004322 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.6 2.6 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.6 3.1 GO:0030371 translation repressor activity(GO:0030371)
0.6 2.9 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.6 1.7 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.6 2.9 GO:0035197 siRNA binding(GO:0035197)
0.6 5.1 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.6 2.2 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.6 2.2 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.5 2.1 GO:0033862 UMP kinase activity(GO:0033862)
0.5 1.6 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.5 2.0 GO:0000406 double-strand/single-strand DNA junction binding(GO:0000406)
0.5 1.5 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.5 3.0 GO:0051002 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.5 1.4 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.5 1.9 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.5 1.9 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.5 1.4 GO:0035671 enone reductase activity(GO:0035671)
0.5 1.4 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.5 3.7 GO:0017091 AU-rich element binding(GO:0017091)
0.5 5.0 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.4 3.1 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.4 1.7 GO:0004057 arginyltransferase activity(GO:0004057)
0.4 1.7 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.4 1.3 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.4 4.7 GO:0016161 beta-amylase activity(GO:0016161)
0.4 1.3 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.4 2.1 GO:0046715 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.4 1.2 GO:0019003 GDP binding(GO:0019003)
0.4 15.8 GO:0031072 heat shock protein binding(GO:0031072)
0.4 1.6 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.4 2.0 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.4 1.2 GO:0016672 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.4 1.6 GO:0050347 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.4 1.6 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.4 5.0 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.4 2.7 GO:0051018 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.4 2.3 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.4 1.9 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.4 1.1 GO:0000824 inositol-1,4,5-trisphosphate 6-kinase activity(GO:0000823) inositol tetrakisphosphate 3-kinase activity(GO:0000824) inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440) inositol tetrakisphosphate 5-kinase activity(GO:0047326) inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725)
0.4 6.3 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.4 3.0 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.4 1.1 GO:0050302 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.4 3.3 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.4 1.5 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.4 1.4 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.4 4.7 GO:0060590 ATPase regulator activity(GO:0060590)
0.4 1.4 GO:0070182 DNA polymerase binding(GO:0070182)
0.4 1.4 GO:0016429 tRNA (adenine-N1-)-methyltransferase activity(GO:0016429)
0.4 1.8 GO:0051740 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.4 2.1 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.3 1.7 GO:0004594 pantothenate kinase activity(GO:0004594)
0.3 1.0 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.3 1.0 GO:0008330 protein tyrosine/threonine phosphatase activity(GO:0008330)
0.3 11.5 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.3 3.9 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.3 1.0 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.3 1.6 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.3 0.6 GO:0008144 drug binding(GO:0008144)
0.3 2.5 GO:0051087 chaperone binding(GO:0051087)
0.3 1.9 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.3 1.2 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.3 0.6 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.3 3.3 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.3 1.8 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.3 2.1 GO:0032029 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.3 0.9 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.3 1.5 GO:0016463 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.3 5.0 GO:0016157 sucrose synthase activity(GO:0016157)
0.3 1.2 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.3 2.3 GO:0019137 thioglucosidase activity(GO:0019137)
0.3 2.3 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.3 3.9 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.3 2.0 GO:0005034 osmosensor activity(GO:0005034)
0.3 21.6 GO:0003724 RNA helicase activity(GO:0003724)
0.3 0.8 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.3 2.3 GO:0010428 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.3 1.8 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.3 1.0 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.3 1.0 GO:0019156 isoamylase activity(GO:0019156)
0.3 0.8 GO:0004046 aminoacylase activity(GO:0004046)
0.3 1.8 GO:0004407 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.3 1.3 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.3 1.3 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.3 0.5 GO:0004127 cytidylate kinase activity(GO:0004127)
0.3 0.8 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.2 1.0 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.2 2.7 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.2 0.7 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.2 1.9 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.2 1.0 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.2 1.7 GO:0016151 nickel cation binding(GO:0016151)
0.2 4.0 GO:0036002 pre-mRNA binding(GO:0036002)
0.2 0.7 GO:0015026 coreceptor activity(GO:0015026)
0.2 0.7 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.2 0.7 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.2 0.7 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.2 10.5 GO:0003713 transcription coactivator activity(GO:0003713)
0.2 2.0 GO:0070300 phosphatidic acid binding(GO:0070300)
0.2 0.9 GO:0004839 ubiquitin activating enzyme activity(GO:0004839)
0.2 1.1 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.2 0.9 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.2 3.1 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.2 0.7 GO:0036310 annealing helicase activity(GO:0036310) annealing activity(GO:0097617)
0.2 2.2 GO:2001070 starch binding(GO:2001070)
0.2 1.1 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.2 1.3 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.2 17.3 GO:0051082 unfolded protein binding(GO:0051082)
0.2 4.9 GO:0030276 clathrin binding(GO:0030276)
0.2 1.0 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.2 1.9 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.2 0.8 GO:0004075 biotin carboxylase activity(GO:0004075)
0.2 12.4 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.2 1.8 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.2 2.4 GO:0047893 flavonol 3-O-glucosyltransferase activity(GO:0047893)
0.2 1.0 GO:0004765 shikimate kinase activity(GO:0004765)
0.2 1.2 GO:0030527 structural constituent of chromatin(GO:0030527)
0.2 0.6 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.2 1.8 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.2 0.8 GO:0070283 radical SAM enzyme activity(GO:0070283)
0.2 0.6 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.2 0.9 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.2 2.2 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.2 1.1 GO:0003913 DNA photolyase activity(GO:0003913)
0.2 8.9 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.2 1.6 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.2 3.1 GO:0035064 methylated histone binding(GO:0035064)
0.2 0.5 GO:0047804 cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.2 1.8 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.2 2.8 GO:0003725 double-stranded RNA binding(GO:0003725)
0.2 0.5 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.2 3.5 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.2 2.8 GO:0051117 ATPase binding(GO:0051117)
0.2 1.2 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.2 1.7 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.2 1.2 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.2 1.2 GO:0019825 oxygen binding(GO:0019825)
0.2 0.3 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.2 1.2 GO:0046030 inositol trisphosphate phosphatase activity(GO:0046030)
0.2 0.3 GO:0017022 myosin binding(GO:0017022)
0.2 1.2 GO:0043015 gamma-tubulin binding(GO:0043015)
0.2 1.8 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.2 6.0 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.2 3.2 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.2 2.1 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.2 9.8 GO:0005096 GTPase activator activity(GO:0005096)
0.2 0.8 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.2 1.1 GO:0015391 nucleobase:cation symporter activity(GO:0015391)
0.2 0.6 GO:0008301 DNA binding, bending(GO:0008301)
0.2 0.8 GO:0004001 adenosine kinase activity(GO:0004001)
0.2 0.8 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.2 1.1 GO:0008022 protein C-terminus binding(GO:0008022)
0.2 1.1 GO:0003747 translation release factor activity(GO:0003747) translation termination factor activity(GO:0008079)
0.2 0.3 GO:0036374 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.2 2.0 GO:0016208 AMP binding(GO:0016208)
0.1 0.9 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.1 1.5 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.1 24.4 GO:0043531 ADP binding(GO:0043531)
0.1 9.1 GO:0003727 single-stranded RNA binding(GO:0003727)
0.1 2.1 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.1 9.2 GO:0003777 microtubule motor activity(GO:0003777)
0.1 1.4 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.1 0.4 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.1 0.7 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 0.1 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.1 1.3 GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730)
0.1 0.8 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.1 0.4 GO:0047443 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.1 1.8 GO:0008327 methyl-CpG binding(GO:0008327)
0.1 0.5 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.1 3.0 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.1 1.3 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.1 1.5 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.1 1.1 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.1 7.3 GO:0042393 histone binding(GO:0042393)
0.1 1.6 GO:0004673 protein histidine kinase activity(GO:0004673) phosphotransferase activity, nitrogenous group as acceptor(GO:0016775)
0.1 0.6 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.1 1.0 GO:0090079 translation activator activity(GO:0008494) translation regulator activity, nucleic acid binding(GO:0090079) mitochondrial ribosome binding(GO:0097177)
0.1 0.8 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 0.6 GO:0004000 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.1 1.2 GO:0000014 single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.1 0.4 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.1 2.0 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.1 1.1 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 0.6 GO:0004333 fumarate hydratase activity(GO:0004333)
0.1 4.2 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.1 2.1 GO:0003951 NAD+ kinase activity(GO:0003951)
0.1 0.4 GO:0008821 crossover junction endodeoxyribonuclease activity(GO:0008821)
0.1 14.7 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 2.0 GO:0051536 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.1 0.6 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 1.6 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 0.3 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity(GO:0010309)
0.1 1.2 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 1.9 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.1 1.3 GO:0008312 7S RNA binding(GO:0008312)
0.1 1.4 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.1 1.9 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 0.9 GO:0019903 protein phosphatase binding(GO:0019903)
0.1 4.9 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.1 1.1 GO:0032041 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 0.4 GO:0030623 U5 snRNA binding(GO:0030623)
0.1 1.4 GO:0019210 kinase inhibitor activity(GO:0019210)
0.1 4.3 GO:0004707 MAP kinase activity(GO:0004707)
0.1 1.6 GO:0001098 RNA polymerase II core binding(GO:0000993) basal transcription machinery binding(GO:0001098) basal RNA polymerase II transcription machinery binding(GO:0001099)
0.1 1.0 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 0.5 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.1 0.9 GO:0004096 catalase activity(GO:0004096)
0.1 1.4 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.1 0.3 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.1 1.0 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.1 0.3 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.1 2.3 GO:0008066 glutamate receptor activity(GO:0008066)
0.1 1.1 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.1 0.4 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.1 0.7 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.1 3.5 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.1 0.6 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 2.6 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.1 0.6 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.1 5.2 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.1 1.3 GO:0031369 translation initiation factor binding(GO:0031369)
0.1 1.3 GO:0004629 phospholipase C activity(GO:0004629)
0.1 2.1 GO:0031386 protein tag(GO:0031386)
0.1 0.7 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 3.5 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 0.4 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.1 0.5 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.1 5.0 GO:0043130 ubiquitin binding(GO:0043130)
0.1 0.6 GO:0004623 phospholipase A2 activity(GO:0004623)
0.1 6.3 GO:0015631 tubulin binding(GO:0015631)
0.1 0.3 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.1 2.5 GO:0009975 cyclase activity(GO:0009975)
0.1 1.2 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.1 0.5 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 0.5 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.1 0.3 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.1 0.7 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.1 0.8 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 0.9 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 0.7 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.1 0.4 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.1 0.2 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 0.7 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.1 0.5 GO:0001653 peptide receptor activity(GO:0001653)
0.1 1.0 GO:0004311 farnesyltranstransferase activity(GO:0004311)
0.1 0.6 GO:0004526 ribonuclease P activity(GO:0004526)
0.1 0.3 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.1 1.3 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 2.2 GO:0071949 FAD binding(GO:0071949)
0.1 0.2 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.1 4.4 GO:0036459 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.1 2.6 GO:0030145 manganese ion binding(GO:0030145)
0.1 7.1 GO:0046982 protein heterodimerization activity(GO:0046982)
0.1 0.2 GO:0004776 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.1 2.2 GO:0080044 quercetin 7-O-glucosyltransferase activity(GO:0080044)
0.1 0.5 GO:0004300 enoyl-CoA hydratase activity(GO:0004300)
0.1 0.4 GO:0005047 signal recognition particle binding(GO:0005047)
0.1 0.5 GO:0080043 quercetin 3-O-glucosyltransferase activity(GO:0080043)
0.1 2.0 GO:0004812 aminoacyl-tRNA ligase activity(GO:0004812) ligase activity, forming carbon-oxygen bonds(GO:0016875) ligase activity, forming aminoacyl-tRNA and related compounds(GO:0016876)
0.1 2.5 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.1 0.4 GO:0010011 auxin binding(GO:0010011)
0.1 2.6 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899) RNA polymerase activity(GO:0034062)
0.1 0.1 GO:0052742 phosphatidylinositol kinase activity(GO:0052742)
0.1 0.4 GO:0051723 protein methylesterase activity(GO:0051723)
0.1 0.6 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.1 3.4 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.1 1.1 GO:0060090 binding, bridging(GO:0060090)
0.1 0.4 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 1.3 GO:0016782 transferase activity, transferring sulfur-containing groups(GO:0016782)
0.1 7.0 GO:0008092 cytoskeletal protein binding(GO:0008092)
0.1 2.7 GO:0016769 transaminase activity(GO:0008483) transferase activity, transferring nitrogenous groups(GO:0016769)
0.1 1.1 GO:0097472 cyclin-dependent protein serine/threonine kinase activity(GO:0004693) RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353) cyclin-dependent protein kinase activity(GO:0097472)
0.1 0.4 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 1.1 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 0.4 GO:0005487 nucleocytoplasmic transporter activity(GO:0005487)
0.1 1.3 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.1 0.5 GO:0031491 nucleosome binding(GO:0031491)
0.1 0.7 GO:0008097 5S rRNA binding(GO:0008097)
0.1 1.5 GO:0019887 protein kinase regulator activity(GO:0019887)
0.1 1.8 GO:0016279 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.1 0.4 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.0 0.1 GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives(GO:0016855) racemase activity, acting on amino acids and derivatives(GO:0036361) amino-acid racemase activity(GO:0047661)
0.0 0.3 GO:0015645 fatty acid ligase activity(GO:0015645)
0.0 0.6 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.3 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 2.0 GO:0043621 protein self-association(GO:0043621)
0.0 11.7 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 1.1 GO:0017137 Rab GTPase binding(GO:0017137)
0.0 0.6 GO:0004402 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.0 0.5 GO:0019905 syntaxin binding(GO:0019905)
0.0 6.4 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.0 1.4 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 2.1 GO:0010857 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 1.5 GO:0008422 beta-glucosidase activity(GO:0008422)
0.0 0.2 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 0.2 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 0.6 GO:0008417 fucosyltransferase activity(GO:0008417)
0.0 1.0 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.8 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 2.4 GO:0003712 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 2.0 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.1 GO:0070034 telomerase RNA binding(GO:0070034)
0.0 0.2 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983) UTP-monosaccharide-1-phosphate uridylyltransferase activity(GO:0051748)
0.0 0.8 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 1.1 GO:0001871 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.1 GO:0032182 ubiquitin-like protein binding(GO:0032182)
0.0 0.5 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.3 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.0 1.0 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 0.3 GO:0004520 endodeoxyribonuclease activity(GO:0004520)
0.0 0.1 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.0 0.7 GO:0044389 ubiquitin protein ligase binding(GO:0031625) ubiquitin-like protein ligase binding(GO:0044389)
0.0 0.2 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 0.4 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 1.2 GO:0070001 aspartic-type peptidase activity(GO:0070001)
0.0 0.1 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 15.6 GO:0044822 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.0 0.4 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.1 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)
0.0 0.1 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.0 0.1 GO:0005217 intracellular ligand-gated ion channel activity(GO:0005217)
0.0 0.1 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.0 35.5 GO:0001071 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0 0.1 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.0 0.2 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.1 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 0.5 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.1 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 6.2 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 0.1 GO:0016860 intramolecular oxidoreductase activity(GO:0016860)
0.0 0.1 GO:0043142 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.2 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.1 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.1 GO:0019239 deaminase activity(GO:0019239)
0.0 0.0 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.3 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.6 5.0 NABA CORE MATRISOME Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans
0.6 2.5 PID ATF2 PATHWAY ATF-2 transcription factor network
0.6 0.6 PID RAS PATHWAY Regulation of Ras family activation
0.6 1.7 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.5 2.1 PID AP1 PATHWAY AP-1 transcription factor network
0.5 2.6 PID P53 REGULATION PATHWAY p53 pathway
0.4 1.5 PID S1P S1P1 PATHWAY S1P1 pathway
0.4 1.4 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.4 1.1 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.3 1.1 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.3 0.8 PID P38 ALPHA BETA DOWNSTREAM PATHWAY Signaling mediated by p38-alpha and p38-beta
0.2 2.1 PID E2F PATHWAY E2F transcription factor network
0.2 1.2 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.2 1.4 PID NOTCH PATHWAY Notch signaling pathway
0.2 0.7 PID ATM PATHWAY ATM pathway
0.2 0.6 PID VEGFR1 2 PATHWAY Signaling events mediated by VEGFR1 and VEGFR2
0.1 0.3 PID TELOMERASE PATHWAY Regulation of Telomerase
0.1 0.6 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.0 0.1 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 0.9 REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex
0.9 0.9 REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION Genes involved in NOTCH1 Intracellular Domain Regulates Transcription
0.8 0.8 REACTOME TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRONLESS TRANSCRIPT Genes involved in Transport of Mature mRNA Derived from an Intronless Transcript
0.8 2.3 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.5 1.4 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.5 2.3 REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT Genes involved in SLC-mediated transmembrane transport
0.4 1.3 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.4 2.2 REACTOME HOST INTERACTIONS OF HIV FACTORS Genes involved in Host Interactions of HIV factors
0.4 1.1 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.3 2.0 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.3 1.1 REACTOME CIRCADIAN CLOCK Genes involved in Circadian Clock
0.2 1.5 REACTOME GLUCOSE METABOLISM Genes involved in Glucose metabolism
0.2 0.4 REACTOME PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA Genes involved in Processing of Capped Intron-Containing Pre-mRNA
0.2 1.2 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.2 1.1 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.2 1.3 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.2 0.5 REACTOME EGFR DOWNREGULATION Genes involved in EGFR downregulation
0.2 0.7 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.2 0.8 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 0.5 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.1 0.9 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
0.1 0.3 REACTOME METABOLISM OF CARBOHYDRATES Genes involved in Metabolism of carbohydrates
0.1 0.9 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
0.1 1.4 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 2.5 REACTOME TRANSLATION Genes involved in Translation
0.1 0.4 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.1 1.5 REACTOME TRANSMEMBRANE TRANSPORT OF SMALL MOLECULES Genes involved in Transmembrane transport of small molecules
0.0 0.1 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein