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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G17800

Z-value: 0.85

Transcription factors associated with AT5G17800

Gene Symbol Gene ID Gene Info
AT5G17800
AT5G17800 myb domain protein 56

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB56arTal_v1_Chr5_+_5877113_5877113-0.641.3e-02Click!

Activity profile of AT5G17800 motif

Sorted Z-values of AT5G17800 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_+_6833564_6833659 1.21 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
DIN10
Raffinose synthase family protein
arTal_v1_Chr5_-_16236_16236 1.12 AT5G01040.1
LAC8
laccase 8
arTal_v1_Chr4_-_12339967_12339967 1.06 AT4G23690.1
DIR6
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr3_-_18525792_18525792 1.05 AT3G49960.1
AT3G49960
Peroxidase superfamily protein
arTal_v1_Chr2_+_19508929_19508929 1.01 AT2G47550.1
AT2G47550
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr5_+_84474_84474 0.98 AT5G01210.1
AT5G01210
HXXXD-type acyl-transferase family protein
arTal_v1_Chr2_-_16780368_16780368 0.95 AT2G40170.1
GEA6
Stress induced protein
arTal_v1_Chr1_-_20458631_20458631 0.91 AT1G54860.1
AT1G54860
Glycoprotein membrane precursor GPI-anchored
arTal_v1_Chr4_-_11896480_11896480 0.89 AT4G22590.1
TPPG
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr4_+_18185437_18185437 0.88 AT4G39030.1
EDS5
MATE efflux family protein
arTal_v1_Chr1_-_22589789_22589789 0.85 AT1G61255.1
AT1G61255
hypothetical protein
arTal_v1_Chr3_+_18704764_18704764 0.79 AT3G50400.1
AT3G50400
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr4_+_7900374_7900374 0.77 AT4G13580.1
AT4G13580
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr2_-_7768040_7768040 0.77 AT2G17880.1
AT2G17880
Chaperone DnaJ-domain superfamily protein
arTal_v1_Chr1_+_28291698_28291698 0.76 AT1G75390.1
AT1G75390.2
bZIP44
basic leucine-zipper 44
arTal_v1_Chr3_-_22972239_22972303 0.69 AT3G62020.2
AT3G62020.1
GLP10
germin-like protein 10
arTal_v1_Chr1_-_19464434_19464434 0.66 AT1G52270.1
AT1G52270
hypothetical protein
arTal_v1_Chr1_+_3777236_3777236 0.66 AT1G11260.1
STP1
sugar transporter 1
arTal_v1_Chr1_-_22363854_22363854 0.65 AT1G60750.1
AT1G60750
NAD(P)-linked oxidoreductase superfamily protein
arTal_v1_Chr5_-_37999_37999 0.65 AT5G01100.1
FRB1
O-fucosyltransferase family protein
arTal_v1_Chr3_-_16448844_16448844 0.64 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
arTal_v1_Chr2_-_16690182_16690182 0.61 AT2G39980.1
AT2G39980
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_+_13434151_13434181 0.61 AT5G35190.2
AT5G35190.1
EXT13
proline-rich extensin-like family protein
arTal_v1_Chr5_+_9234600_9234600 0.61 AT5G26310.1
UGT72E3
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr2_-_8533779_8533779 0.61 AT2G19800.1
MIOX2
myo-inositol oxygenase 2
arTal_v1_Chr2_+_17854557_17854557 0.60 AT2G42900.1
AT2G42900
Plant basic secretory protein (BSP) family protein
arTal_v1_Chr1_-_26335630_26335630 0.60 AT1G69920.1
GSTU12
glutathione S-transferase TAU 12
arTal_v1_Chr3_-_6980523_6980523 0.60 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
arTal_v1_Chr2_-_16111911_16111911 0.59 AT2G38480.1
AT2G38480
Uncharacterized protein family (UPF0497)
arTal_v1_Chr5_-_1722910_1722933 0.59 AT5G05730.2
AT5G05730.1
ASA1
anthranilate synthase alpha subunit 1
arTal_v1_Chr4_-_6425678_6425678 0.58 AT4G10370.1
AT4G10370
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr5_+_463073_463073 0.58 AT5G02260.1
EXPA9
expansin A9
arTal_v1_Chr5_-_5184948_5184948 0.58 AT5G15870.1
AT5G15870
glycosyl hydrolase family 81 protein
arTal_v1_Chr4_-_10828618_10828618 0.58 AT4G19980.1
AT4G19980
hypothetical protein
arTal_v1_Chr5_+_9377249_9377329 0.57 AT5G26600.1
AT5G26600.2
AT5G26600
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
arTal_v1_Chr4_-_14002069_14002124 0.56 AT4G28250.2
AT4G28250.3
AT4G28250.4
AT4G28250.1
EXPB3
expansin B3
arTal_v1_Chr5_-_20016857_20016857 0.56 AT5G49360.1
BXL1
beta-xylosidase 1
arTal_v1_Chr5_-_2655732_2655870 0.55 AT5G08250.1
AT5G08250.2
AT5G08250
Cytochrome P450 superfamily protein
arTal_v1_Chr1_+_954290_954290 0.55 AT1G03790.1
SOM
Zinc finger C-x8-C-x5-C-x3-H type family protein
arTal_v1_Chr1_-_3029549_3029549 0.54 AT1G09380.1
UMAMIT25
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr4_+_6836106_6836106 0.53 AT4G11211.1
AT4G11211
hypothetical protein
arTal_v1_Chr5_+_18345534_18345595 0.53 AT5G45280.2
AT5G45280.1
AT5G45280
Pectinacetylesterase family protein
arTal_v1_Chr1_-_6908805_6908805 0.52 AT1G19900.1
AT1G19900
glyoxal oxidase-related protein
arTal_v1_Chr3_-_10590685_10590685 0.51 AT3G28340.1
GATL10
galacturonosyltransferase-like 10
arTal_v1_Chr1_+_1136078_1136078 0.51 AT1G04250.1
AXR3
AUX/IAA transcriptional regulator family protein
arTal_v1_Chr1_-_1696191_1696191 0.50 AT1G05660.1
AT1G05660
Pectin lyase-like superfamily protein
arTal_v1_Chr1_-_8153530_8153796 0.50 AT1G23020.2
AT1G23020.7
AT1G23020.6
AT1G23020.5
AT1G23020.4
AT1G23020.3
AT1G23020.1
FRO3
ferric reduction oxidase 3
arTal_v1_Chr3_+_5121303_5121303 0.49 AT3G15210.1
ERF4
ethylene responsive element binding factor 4
arTal_v1_Chr1_+_20143144_20143144 0.49 AT1G53940.1
AT1G53940.2
GLIP2
GDSL-motif lipase 2
arTal_v1_Chr3_+_22492811_22492811 0.48 AT3G60870.1
AHL18
AT-hook motif nuclear-localized protein 18
arTal_v1_Chr1_+_12180483_12180483 0.48 AT1G33600.1
AT1G33600
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr4_+_17882644_17882644 0.47 AT4G38080.1
AT4G38080
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr3_-_20442650_20442650 0.47 AT3G55150.1
EXO70H1
exocyst subunit exo70 family protein H1
arTal_v1_Chr5_+_19179881_19179881 0.47 AT5G47230.1
ERF5
ethylene responsive element binding factor 5
arTal_v1_Chr2_+_9903215_9903215 0.46 AT2G23270.1
AT2G23270
transmembrane protein
arTal_v1_Chr5_+_21811633_21811633 0.46 AT5G53740.1
AT5G53740
hypothetical protein
arTal_v1_Chr2_+_15876717_15876718 0.45 AT2G37940.2
AT2G37940.1
AtIPCS2
Inositol phosphorylceramide synthase 2
arTal_v1_Chr5_-_4069094_4069094 0.45 AT5G12880.1
AT5G12880
proline-rich family protein
arTal_v1_Chr5_+_16624157_16624157 0.44 AT5G41570.1
WRKY24
WRKY DNA-binding protein 24
arTal_v1_Chr2_-_18087071_18087085 0.43 AT2G43600.1
AT2G43600.2
AT2G43600
Chitinase family protein
arTal_v1_Chr2_-_19412328_19412328 0.43 AT2G47270.1
UPB1
transcription factor UPBEAT protein
arTal_v1_Chr1_+_12180776_12180776 0.43 AT1G33600.2
AT1G33600
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr5_-_573634_573634 0.43 AT5G02550.1
AT5G02550
hypothetical protein
arTal_v1_Chr3_-_22976603_22976603 0.42 AT3G62040.1
AT3G62040
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr3_-_18649521_18649521 0.42 AT3G50310.1
MAPKKK20
mitogen-activated protein kinase kinase kinase 20
arTal_v1_Chr5_+_23728588_23728676 0.42 AT5G58750.1
AT5G58750.2
AT5G58750
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr3_-_8902835_8902835 0.41 AT3G24480.1
AT3G24480
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_-_10949482_10949482 0.41 AT1G30820.1
AT1G30820
CTP synthase family protein
arTal_v1_Chr1_+_7346156_7346156 0.41 AT1G21010.1
AT1G21010
poly polymerase
arTal_v1_Chr2_-_14862178_14862178 0.41 AT2G35290.1
AT2G35290
hypothetical protein
arTal_v1_Chr1_+_8401808_8401808 0.40 AT1G23760.1
JP630
BURP domain-containing protein
arTal_v1_Chr1_+_7858864_7858864 0.40 AT1G22250.1
AT1G22250
hypothetical protein
arTal_v1_Chr5_+_22652715_22652715 0.40 AT5G55930.1
OPT1
oligopeptide transporter 1
arTal_v1_Chr5_-_16272513_16272513 0.39 AT5G40630.1
AT5G40630
Ubiquitin-like superfamily protein
arTal_v1_Chr2_-_13549571_13549571 0.39 AT2G31865.3
AT2G31865.1
AT2G31865.2
PARG2
poly(ADP-ribose) glycohydrolase 2
arTal_v1_Chr3_-_2830649_2830655 0.39 AT3G09220.2
AT3G09220.1
LAC7
laccase 7
arTal_v1_Chr4_-_8726733_8726733 0.38 AT4G15290.1
ATCSLB05
Cellulose synthase family protein
arTal_v1_Chr2_+_18316278_18316426 0.38 AT2G44350.2
AT2G44350.1
AT2G44350.3
AT2G44350.4
ATCS
Citrate synthase family protein
arTal_v1_Chr5_+_6414488_6414488 0.38 AT5G19120.1
AT5G19120
Eukaryotic aspartyl protease family protein
arTal_v1_Chr4_-_9883432_9883432 0.38 AT4G17785.1
AT4G17785.2
MYB39
myb domain protein 39
arTal_v1_Chr4_-_12916083_12916156 0.38 AT4G25190.2
AT4G25190.1
QWRF7
QWRF motif protein (DUF566)
arTal_v1_Chr5_-_26607012_26607012 0.38 AT5G66650.1
AT5G66650
calcium uniporter (DUF607)
arTal_v1_Chr3_+_19042858_19042858 0.37 AT3G51300.1
ROP1
RHO-related protein from plants 1
arTal_v1_Chr5_-_157601_157601 0.37 AT5G01380.1
AT5G01380
Homeodomain-like superfamily protein
arTal_v1_Chr3_-_21499943_21499943 0.37 AT3G58060.1
AT3G58060
Cation efflux family protein
arTal_v1_Chr1_+_21017311_21017311 0.37 AT1G56150.1
AT1G56150
SAUR-like auxin-responsive protein family
arTal_v1_Chr2_+_17251819_17251819 0.37 AT2G41380.1
AT2G41380
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_-_4970311_4970311 0.36 AT1G14520.1
AT1G14520.3
AT1G14520.4
MIOX1
myo-inositol oxygenase 1
arTal_v1_Chr4_-_14424898_14424898 0.36 AT4G29270.1
AT4G29270
HAD superfamily, subfamily IIIB acid phosphatase
arTal_v1_Chr5_-_14926325_14926333 0.35 AT5G37570.1
AT5G37570.2
AT5G37570
Pentatricopeptide repeat (PPR-like) superfamily protein
arTal_v1_Chr4_+_8949460_8949460 0.35 AT4G15720.1
AT4G15720
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_+_1279351_1279351 0.35 AT1G04610.1
YUC3
YUCCA 3
arTal_v1_Chr1_+_23168767_23168767 0.34 AT1G62570.1
FMO GS-OX4
flavin-monooxygenase glucosinolate S-oxygenase 4
arTal_v1_Chr1_+_19087384_19087384 0.34 AT1G51470.1
BGLU35
beta glucosidase 35
arTal_v1_Chr4_-_15081712_15081775 0.34 AT4G30980.1
AT4G30980.2
LRL2
LJRHL1-like 2
arTal_v1_Chr4_-_1548871_1548871 0.34 AT4G03480.1
AT4G03480.2
AT4G03480
Ankyrin repeat family protein
arTal_v1_Chr4_-_7386931_7386931 0.34 AT4G12450.1
AT4G12450
zinc finger (C2H2 type) family protein
arTal_v1_Chr5_+_9830251_9830251 0.34 AT5G27760.2
AT5G27760.1
AT5G27760
Hypoxia-responsive family protein
arTal_v1_Chr1_+_4542168_4542168 0.34 AT1G13260.1
RAV1
related to ABI3/VP1 1
arTal_v1_Chr1_+_13560124_13560124 0.33 AT1G36185.1
AT1G36185

arTal_v1_Chr3_-_21499676_21499676 0.33 AT3G58060.2
AT3G58060
Cation efflux family protein
arTal_v1_Chr4_+_6967709_6967729 0.33 AT4G11470.2
AT4G11470.1
CRK31
cysteine-rich RLK (RECEPTOR-like protein kinase) 31
arTal_v1_Chr1_-_29768789_29768793 0.33 AT1G79120.1
AT1G79120.2
AT1G79120
Ubiquitin carboxyl-terminal hydrolase family protein
arTal_v1_Chr5_+_6585355_6585491 0.33 AT5G19520.1
AT5G19520.2
MSL9
mechanosensitive channel of small conductance-like 9
arTal_v1_Chr3_+_5234457_5234457 0.33 AT3G15500.1
NAC3
NAC domain containing protein 3
arTal_v1_Chr3_-_17902872_17902872 0.33 AT3G48344.1
AT3G48344
hypothetical protein
arTal_v1_Chr3_+_9776958_9776958 0.33 AT3G26610.1
AT3G26610
Pectin lyase-like superfamily protein
arTal_v1_Chr3_-_19165322_19165322 0.33 AT3G51660.1
AT3G51660
Tautomerase/MIF superfamily protein
arTal_v1_Chr3_-_19063538_19063538 0.33 AT3G51350.1
AT3G51350
Eukaryotic aspartyl protease family protein
arTal_v1_Chr3_-_19008724_19008724 0.33 AT3G51160.1
MUR1
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr3_-_8119490_8119490 0.33 AT3G22910.1
AT3G22910
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
arTal_v1_Chr3_+_10848241_10848241 0.32 AT3G28850.1
AT3G28850
Glutaredoxin family protein
arTal_v1_Chr1_+_30241452_30241452 0.32 AT1G80440.1
AT1G80440
Galactose oxidase/kelch repeat superfamily protein
arTal_v1_Chr4_+_131422_131422 0.32 AT4G00305.1
AT4G00305
RING/U-box superfamily protein
arTal_v1_Chr5_+_619865_619865 0.32 AT5G02750.1
SGR9
RING/U-box superfamily protein
arTal_v1_Chr5_-_7820760_7820760 0.32 AT5G23220.1
NIC3
nicotinamidase 3
arTal_v1_Chr3_-_16487349_16487484 0.32 AT3G45070.1
AT3G45070.3
AT3G45070.2
AT3G45070
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr2_-_18914739_18914739 0.32 AT2G45970.1
CYP86A8
cytochrome P450, family 86, subfamily A, polypeptide 8
arTal_v1_Chr3_-_1071438_1071438 0.32 AT3G04080.1
APY1
apyrase 1
arTal_v1_Chr3_-_2607895_2607895 0.32 AT3G08580.2
AAC1
ADP/ATP carrier 1
arTal_v1_Chr3_-_2607573_2607573 0.31 AT3G08580.1
AAC1
ADP/ATP carrier 1
arTal_v1_Chr3_-_202754_202754 0.31 AT3G01513.1
AT3G01513
hypothetical protein
arTal_v1_Chr1_-_3296198_3296198 0.31 AT1G10090.1
AT1G10090
Early-responsive to dehydration stress protein (ERD4)
arTal_v1_Chr4_+_13320408_13320408 0.30 AT4G26330.1
AT4G26330.2
UNE17
Subtilisin-like serine endopeptidase family protein
arTal_v1_Chr4_-_15181937_15181937 0.30 AT4G31250.1
AT4G31250
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr1_+_4872856_4872856 0.30 AT1G14260.2
AT1G14260.1
AT1G14260
RING/FYVE/PHD zinc finger superfamily protein
arTal_v1_Chr1_-_7968692_7968692 0.30 AT1G22550.1
AT1G22550
Major facilitator superfamily protein
arTal_v1_Chr2_+_16658468_16658468 0.30 AT2G39900.1
WLIM2a
GATA type zinc finger transcription factor family protein
arTal_v1_Chr1_+_6644189_6644189 0.29 AT1G19230.1
AT1G19230
Riboflavin synthase-like superfamily protein
arTal_v1_Chr5_-_1792634_1792634 0.29 AT5G05965.1
AT5G05965
cell wall RBR3-like protein
arTal_v1_Chr4_+_10259600_10259600 0.28 AT4G18640.1
MRH1
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr2_+_11566288_11566288 0.28 AT2G27080.1
AT2G27080
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr5_-_26399242_26399274 0.28 AT5G66005.2
AT5G66005.4
AT5G66005.8
AT5G66005.6
AT5G66005.7
AT5G66005.5
AT5G66005.3
AT5G66005
Expressed protein
arTal_v1_Chr1_+_6643942_6643942 0.28 AT1G19230.2
AT1G19230
Riboflavin synthase-like superfamily protein
arTal_v1_Chr4_+_9759203_9759203 0.27 AT4G17500.1
ERF-1
ethylene responsive element binding factor 1
arTal_v1_Chr1_-_513698_513721 0.27 AT1G02470.2
AT1G02470.1
AT1G02470
Polyketide cyclase/dehydrase and lipid transport superfamily protein
arTal_v1_Chr5_+_20907195_20907195 0.27 AT5G51470.1
AT5G51470
Auxin-responsive GH3 family protein
arTal_v1_Chr1_-_29084285_29084285 0.27 AT1G77390.1
CYCA1%3B2
CYCLIN A1;2
arTal_v1_Chr2_+_16452612_16452612 0.27 AT2G39400.2
AT2G39400.1
AT2G39400
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr3_+_17648495_17648495 0.27 AT3G47833.1
SDH7
succinate dehydrogenase subunit
arTal_v1_Chr5_-_23890431_23890431 0.27 AT5G59200.1
OTP80
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_-_19404147_19404147 0.27 AT5G47920.1
AT5G47920
transcription elongation factor
arTal_v1_Chr5_+_72292_72292 0.27 AT5G01190.2
AT5G01190.1
LAC10
laccase 10
arTal_v1_Chr5_+_18137349_18137349 0.26 AT5G44910.1
AT5G44910
Toll-Interleukin-Resistance (TIR) domain family protein
arTal_v1_Chr5_+_24240810_24240810 0.26 AT5G60200.1
TMO6
TARGET OF MONOPTEROS 6
arTal_v1_Chr2_-_11228123_11228123 0.26 AT2G26380.1
AT2G26380
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr5_+_20907621_20907621 0.26 AT5G51470.2
AT5G51470
Auxin-responsive GH3 family protein
arTal_v1_Chr5_+_6192327_6192443 0.26 AT5G18610.2
AT5G18610.3
AT5G18610.1
AT5G18610
Protein kinase superfamily protein
arTal_v1_Chr2_-_7084495_7084495 0.26 AT2G16370.3
THY-1
thymidylate synthase 1
arTal_v1_Chr5_+_4930425_4930425 0.26 AT5G15180.1
AT5G15180
Peroxidase superfamily protein
arTal_v1_Chr4_-_13836661_13836661 0.26 AT4G27730.1
OPT6
oligopeptide transporter 1
arTal_v1_Chr3_-_19467455_19467455 0.26 AT3G52500.1
AT3G52500
Eukaryotic aspartyl protease family protein
arTal_v1_Chr2_-_7084865_7084865 0.25 AT2G16370.1
AT2G16370.2
THY-1
thymidylate synthase 1
arTal_v1_Chr2_+_3618058_3618058 0.25 AT2G08986.1
AT2G08986
hypothetical protein
arTal_v1_Chr5_+_8950884_8950884 0.25 AT5G25750.1
AT5G25750
hypothetical protein
arTal_v1_Chr4_+_16438469_16438469 0.25 AT4G34380.1
AT4G34380
Transducin/WD40 repeat-like superfamily protein
arTal_v1_Chr4_+_8222467_8222467 0.25 AT4G14280.1
AT4G14280
ARM repeat superfamily protein
arTal_v1_Chr5_-_7040919_7040919 0.25 AT5G20790.1
AT5G20790
transmembrane protein
arTal_v1_Chr4_+_15024444_15024444 0.25 AT4G30860.1
SDG4
SET domain group 4
arTal_v1_Chr5_-_15754690_15754690 0.24 AT5G39360.1
EDL2
EID1-like 2
arTal_v1_Chr1_-_25169707_25169707 0.24 AT1G67260.2
AT1G67260.3
TCP1
TCP family transcription factor
arTal_v1_Chr1_-_13322511_13322511 0.24 AT1G35830.1
AT1G35830
VQ motif-containing protein
arTal_v1_Chr4_-_11120595_11120595 0.24 AT4G20730.1
AT4G20730

arTal_v1_Chr3_+_8997370_8997370 0.24 AT3G24650.1
ABI3
AP2/B3-like transcriptional factor family protein
arTal_v1_Chr1_+_1843463_1843568 0.24 AT1G06080.1
AT1G06080.2
ADS1
delta 9 desaturase 1
arTal_v1_Chr1_-_4970007_4970007 0.24 AT1G14520.2
MIOX1
myo-inositol oxygenase 1
arTal_v1_Chr1_-_22595338_22595338 0.24 AT1G61260.1
AT1G61260
cotton fiber (DUF761)
arTal_v1_Chr5_+_6372735_6372735 0.24 AT5G19060.1
AT5G19060
cytochrome P450 family protein
arTal_v1_Chr3_+_6383289_6383289 0.24 AT3G18550.3
AT3G18550.1
BRC1
TCP family transcription factor
arTal_v1_Chr5_+_7350575_7350575 0.24 AT5G22170.1
AT5G22170
transmembrane protein
arTal_v1_Chr5_-_2888553_2888553 0.24 AT5G09310.1
AT5G09310
gamma-secretase subunit
arTal_v1_Chr2_+_11563933_11563933 0.24 AT2G27080.2
AT2G27080
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr1_-_926373_926373 0.24 AT1G03720.2
AT1G03720.1
AT1G03720
Cysteine proteinases superfamily protein
arTal_v1_Chr3_-_6525543_6525543 0.24 AT3G18930.2
AT3G18930
RING/U-box superfamily protein
arTal_v1_Chr4_+_15819489_15819489 0.24 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr3_+_18173087_18173138 0.24 AT3G49030.2
AT3G49030.1
AT3G49030
FBD, F-box and Leucine Rich Repeat domains containing protein
arTal_v1_Chr1_-_24201231_24201346 0.24 AT1G65130.5
AT1G65130.3
AT1G65130
Ubiquitin carboxyl-terminal hydrolase-related protein
arTal_v1_Chr5_-_4344792_4344792 0.24 AT5G13520.1
AT5G13520
peptidase M1 family protein
arTal_v1_Chr3_-_3955550_3955550 0.23 AT3G12460.1
AT3G12460
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
arTal_v1_Chr1_-_1330402_1330402 0.23 AT1G04730.3
CTF18
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr2_+_8550253_8550253 0.23 AT2G19810.1
OZF1
CCCH-type zinc finger family protein
arTal_v1_Chr5_-_23792382_23792382 0.23 AT5G58910.2
LAC16
laccase 16
arTal_v1_Chr5_+_1952505_1952505 0.23 AT5G06390.1
FLA17
FASCICLIN-like arabinogalactan protein 17 precursor
arTal_v1_Chr5_+_13893602_13893602 0.23 AT5G35730.1
AT5G35730
EXS (ERD1/XPR1/SYG1) family protein
arTal_v1_Chr1_-_9968495_9968495 0.23 AT1G28390.1
AT1G28390
Protein kinase superfamily protein
arTal_v1_Chr5_-_26920179_26920179 0.23 AT5G67450.1
ZF1
zinc-finger protein 1
arTal_v1_Chr3_+_6383687_6383687 0.23 AT3G18550.4
BRC1
TCP family transcription factor
arTal_v1_Chr5_-_22837963_22837972 0.23 AT5G56370.2
AT5G56370.3
AT5G56370.1
AT5G56370
F-box/RNI-like/FBD-like domains-containing protein
arTal_v1_Chr1_-_8995617_8995617 0.23 AT1G25570.1
AT1G25570
Di-glucose binding protein with Leucine-rich repeat domain-containing protein
arTal_v1_Chr3_+_6383508_6383508 0.23 AT3G18550.2
BRC1
TCP family transcription factor
arTal_v1_Chr2_+_10662190_10662190 0.23 AT2G25060.1
ENODL14
early nodulin-like protein 14
arTal_v1_Chr5_-_16687706_16687706 0.22 AT5G41730.2
AT5G41730
Protein kinase family protein
arTal_v1_Chr2_+_14150993_14150993 0.22 AT2G33390.2
AT2G33390.1
AT2G33390
hypothetical protein
arTal_v1_Chr1_-_24201022_24201022 0.22 AT1G65130.1
AT1G65130.2
AT1G65130.4
AT1G65130
Ubiquitin carboxyl-terminal hydrolase-related protein
arTal_v1_Chr1_-_9968301_9968301 0.22 AT1G28390.2
AT1G28390
Protein kinase superfamily protein
arTal_v1_Chr3_-_6526044_6526044 0.22 AT3G18930.1
AT3G18930.3
AT3G18930
RING/U-box superfamily protein
arTal_v1_Chr4_-_16069367_16069374 0.22 AT4G33360.3
AT4G33360.2
AT4G33360.1
FLDH
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_-_25169307_25169307 0.22 AT1G67260.1
TCP1
TCP family transcription factor
arTal_v1_Chr2_+_12209800_12209800 0.22 AT2G28520.1
VHA-A1
vacuolar proton ATPase A1
arTal_v1_Chr5_-_4915976_4915976 0.22 AT5G15150.1
HB-3
homeobox 3

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G17800

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 GO:0019310 inositol catabolic process(GO:0019310)
0.2 1.1 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.1 0.6 GO:0045903 positive regulation of translational fidelity(GO:0045903)
0.1 0.2 GO:0016110 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.1 0.6 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 1.2 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.1 0.2 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.1 0.3 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.3 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.1 0.2 GO:0010055 atrichoblast differentiation(GO:0010055)
0.1 1.2 GO:0060688 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.1 0.7 GO:0015749 monosaccharide transport(GO:0015749)
0.1 0.3 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.1 0.6 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.1 1.1 GO:0046688 response to copper ion(GO:0046688)
0.0 0.2 GO:0015824 proline transport(GO:0015824)
0.0 0.7 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 0.7 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 0.3 GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.0 0.4 GO:0010264 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.0 0.5 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 0.3 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.1 GO:0060211 positive regulation of mRNA processing(GO:0050685) regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.0 0.2 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.0 0.5 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 0.5 GO:0006949 syncytium formation(GO:0006949)
0.0 0.1 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.0 0.6 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.0 0.5 GO:0015865 purine nucleotide transport(GO:0015865)
0.0 0.2 GO:0010376 stomatal complex formation(GO:0010376)
0.0 0.4 GO:0030834 regulation of actin filament depolymerization(GO:0030834)
0.0 0.9 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 1.1 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.6 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.0 0.2 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.0 0.2 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.0 0.2 GO:0007035 vacuolar acidification(GO:0007035) intracellular pH reduction(GO:0051452)
0.0 0.4 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.1 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.0 0.6 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.0 0.3 GO:0046379 UDP-L-arabinose biosynthetic process(GO:0033358) extracellular polysaccharide biosynthetic process(GO:0045226) capsule polysaccharide biosynthetic process(GO:0045227) capsule organization(GO:0045230) extracellular polysaccharide metabolic process(GO:0046379)
0.0 0.5 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.0 0.2 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.0 0.2 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 0.1 GO:0010482 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.0 0.2 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.0 0.2 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.2 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.2 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.0 0.9 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.2 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.0 0.2 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.2 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.7 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 1.0 GO:0022611 seed dormancy process(GO:0010162) dormancy process(GO:0022611)
0.0 0.5 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.4 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.0 0.2 GO:0046620 regulation of organ growth(GO:0046620)
0.0 0.9 GO:0006099 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 0.4 GO:0006282 regulation of DNA repair(GO:0006282)
0.0 0.2 GO:0009704 de-etiolation(GO:0009704)
0.0 0.2 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.3 GO:0051017 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 1.8 GO:0080167 response to karrikin(GO:0080167)
0.0 0.1 GO:0019079 viral genome replication(GO:0019079)
0.0 0.6 GO:0006749 glutathione metabolic process(GO:0006749)
0.0 0.3 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.1 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.2 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.3 GO:2000031 regulation of salicylic acid mediated signaling pathway(GO:2000031)
0.0 0.1 GO:0006549 isoleucine metabolic process(GO:0006549) isoleucine biosynthetic process(GO:0009097)
0.0 0.1 GO:0009557 antipodal cell differentiation(GO:0009557)
0.0 0.3 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.1 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.0 0.4 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.3 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.0 0.2 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.1 GO:1900458 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726) regulation of protein export from nucleus(GO:0046825) negative regulation of brassinosteroid mediated signaling pathway(GO:1900458)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0009501 amyloplast(GO:0009501)
0.1 0.6 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.1 0.2 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.0 0.4 GO:0048226 Casparian strip(GO:0048226)
0.0 0.3 GO:0031209 SCAR complex(GO:0031209)
0.0 0.4 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.2 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.1 GO:0000836 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.0 0.3 GO:0045283 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.0 0.6 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.2 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 0.5 GO:0000145 exocyst(GO:0000145)
0.0 0.1 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 GO:0050113 inositol oxygenase activity(GO:0050113)
0.2 1.5 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.4 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.1 0.6 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.1 1.2 GO:0052736 beta-glucanase activity(GO:0052736)
0.1 0.6 GO:0004049 anthranilate synthase activity(GO:0004049)
0.1 2.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.3 GO:0008936 nicotinamidase activity(GO:0008936)
0.1 0.5 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.3 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 0.2 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.1 0.7 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.1 0.7 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.1 0.7 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.1 0.6 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.2 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
0.0 0.5 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.3 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.3 GO:0019137 thioglucosidase activity(GO:0019137)
0.0 1.1 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.3 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.2 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.0 0.1 GO:0043812 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.0 0.3 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.0 0.8 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.2 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.0 0.2 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 0.7 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.1 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.0 0.2 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 0.2 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.0 0.9 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.4 GO:0004708 MAP kinase kinase activity(GO:0004708) MAP kinase kinase kinase activity(GO:0004709)
0.0 0.3 GO:0043495 protein anchor(GO:0043495)
0.0 0.1 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.0 0.3 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.0 0.2 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.0 0.1 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.2 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.2 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.0 0.1 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.0 0.1 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.0 0.2 GO:0004383 peptide receptor activity(GO:0001653) guanylate cyclase activity(GO:0004383)
0.0 0.7 GO:0000049 tRNA binding(GO:0000049)
0.0 0.1 GO:0004142 diacylglycerol cholinephosphotransferase activity(GO:0004142)
0.0 0.4 GO:0004568 chitinase activity(GO:0004568)
0.0 0.1 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.0 0.2 GO:0035198 miRNA binding(GO:0035198)
0.0 0.8 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.2 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.2 GO:0051117 ATPase binding(GO:0051117)
0.0 0.2 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 0.2 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.3 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 0.2 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 0.2 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.7 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.2 GO:0010333 terpene synthase activity(GO:0010333)
0.0 0.5 GO:0008408 3'-5' exonuclease activity(GO:0008408)
0.0 1.0 GO:0004601 peroxidase activity(GO:0004601)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC Genes involved in Formation of tubulin folding intermediates by CCT/TriC
0.1 0.4 REACTOME METABOLISM OF NUCLEOTIDES Genes involved in Metabolism of nucleotides
0.1 0.3 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism