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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G46830

Z-value: 1.27

Transcription factors associated with AT5G46830

Gene Symbol Gene ID Gene Info
AT5G46830
AT5G46830 calcium-binding transcription factor NIG1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NIG1arTal_v1_Chr5_+_19002564_19002564-0.029.5e-01Click!

Activity profile of AT5G46830 motif

Sorted Z-values of AT5G46830 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr5_+_16441808_16441808 2.12 AT5G41080.2
GDPD2
PLC-like phosphodiesterases superfamily protein
arTal_v1_Chr5_+_16441655_16441655 2.10 AT5G41080.1
GDPD2
PLC-like phosphodiesterases superfamily protein
arTal_v1_Chr5_-_19036938_19036938 1.71 AT5G46890.1
AT5G46890
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_+_6833564_6833659 1.68 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
DIN10
Raffinose synthase family protein
arTal_v1_Chr3_+_20354351_20354351 1.67 AT3G54940.3
AT3G54940.2
AT3G54940
Papain family cysteine protease
arTal_v1_Chr1_+_20458952_20459006 1.63 AT1G54870.2
AT1G54870.1
AT1G54870
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_+_12851983_12851983 1.56 AT1G35140.1
PHI-1
Phosphate-responsive 1 family protein
arTal_v1_Chr3_-_11194897_11194993 1.51 AT3G29250.2
AT3G29250.1
SDR4
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr3_-_790693_790693 1.49 AT3G03341.1
AT3G03341
cold-regulated protein
arTal_v1_Chr4_-_9754161_9754161 1.49 AT4G17490.1
ERF6
ethylene responsive element binding factor 6
arTal_v1_Chr1_-_20458631_20458631 1.45 AT1G54860.1
AT1G54860
Glycoprotein membrane precursor GPI-anchored
arTal_v1_Chr1_-_2747936_2747967 1.42 AT1G08630.6
AT1G08630.7
AT1G08630.5
AT1G08630.2
THA1
threonine aldolase 1
arTal_v1_Chr3_-_2130451_2130451 1.40 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr3_-_7656053_7656053 1.37 AT3G21720.1
ICL
isocitrate lyase
arTal_v1_Chr5_+_26772644_26772644 1.33 AT5G67080.1
MAPKKK19
mitogen-activated protein kinase kinase kinase 19
arTal_v1_Chr3_-_17008528_17008528 1.32 AT3G46280.1
AT3G46280
kinase-like protein
arTal_v1_Chr3_+_5505360_5505360 1.29 AT3G16240.1
DELTA-TIP
delta tonoplast integral protein
arTal_v1_Chr1_+_19619724_19619745 1.25 AT1G52690.2
AT1G52690.1
LEA7
Late embryogenesis abundant protein (LEA) family protein
arTal_v1_Chr1_-_3398358_3398358 1.25 AT1G10370.1
ERD9
Glutathione S-transferase family protein
arTal_v1_Chr2_+_8097420_8097420 1.24 AT2G18690.2
AT2G18690.1
AT2G18690
transmembrane protein
arTal_v1_Chr2_-_16780368_16780368 1.23 AT2G40170.1
GEA6
Stress induced protein
arTal_v1_Chr3_+_4462841_4462841 1.18 AT3G13650.1
AT3G13650
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr1_-_27569823_27569823 1.17 AT1G73330.1
DR4
drought-repressed 4
arTal_v1_Chr3_-_11195171_11195171 1.17 AT3G29250.3
SDR4
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr5_-_17962276_17962276 1.16 AT5G44568.1
AT5G44568
transmembrane protein
arTal_v1_Chr4_-_14002069_14002124 1.16 AT4G28250.2
AT4G28250.3
AT4G28250.4
AT4G28250.1
EXPB3
expansin B3
arTal_v1_Chr1_-_16838562_16838562 1.15 AT1G44350.1
ILL6
IAA-amino acid hydrolase ILR1-like 6
arTal_v1_Chr4_-_12886695_12886740 1.15 AT4G25100.1
AT4G25100.3
AT4G25100.4
FSD1
Fe superoxide dismutase 1
arTal_v1_Chr3_-_12451556_12451556 1.15 AT3G30775.2
AT3G30775.1
ERD5
Methylenetetrahydrofolate reductase family protein
arTal_v1_Chr4_+_5740219_5740219 1.14 AT4G08950.1
EXO
Phosphate-responsive 1 family protein
arTal_v1_Chr1_+_6697874_6697874 1.08 AT1G19380.1
AT1G19380
sugar, putative (DUF1195)
arTal_v1_Chr2_-_19019255_19019364 1.07 AT2G46330.2
AT2G46330.1
AGP16
arabinogalactan protein 16
arTal_v1_Chr2_-_14541617_14541617 1.06 AT2G34500.1
CYP710A1
cytochrome P450, family 710, subfamily A, polypeptide 1
arTal_v1_Chr5_-_19249622_19249622 1.06 AT5G47450.1
TIP2%3B3
tonoplast intrinsic protein 2;3
arTal_v1_Chr3_-_6000447_6000447 1.05 AT3G17520.1
AT3G17520
Late embryogenesis abundant protein (LEA) family protein
arTal_v1_Chr5_+_23187840_23187840 1.05 AT5G57220.1
CYP81F2
cytochrome P450, family 81, subfamily F, polypeptide 2
arTal_v1_Chr1_-_9956960_9956980 1.04 AT1G28370.1
AT1G28370.2
ERF11
ERF domain protein 11
arTal_v1_Chr4_+_17752079_17752079 1.04 AT4G37770.1
ACS8
1-amino-cyclopropane-1-carboxylate synthase 8
arTal_v1_Chr5_-_23992908_23992908 1.04 AT5G59520.1
ZIP2
ZRT/IRT-like protein 2
arTal_v1_Chr2_+_15110492_15110492 1.02 AT2G35980.1
YLS9
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
arTal_v1_Chr1_+_3288087_3288087 1.01 AT1G10070.3
AT1G10070.2
AT1G10070.1
BCAT-2
branched-chain amino acid transaminase 2
arTal_v1_Chr1_-_7553975_7553975 1.00 AT1G21550.1
AT1G21550
Calcium-binding EF-hand family protein
arTal_v1_Chr5_+_16202142_16202142 1.00 AT5G40460.1
AT5G40460
cyclin-dependent kinase inhibitor SMR3-like protein
arTal_v1_Chr5_+_9200271_9200271 1.00 AT5G26260.1
AT5G26260
TRAF-like family protein
arTal_v1_Chr1_-_4970311_4970311 1.00 AT1G14520.1
AT1G14520.3
AT1G14520.4
MIOX1
myo-inositol oxygenase 1
arTal_v1_Chr5_+_4488476_4488476 0.98 AT5G13930.1
TT4
Chalcone and stilbene synthase family protein
arTal_v1_Chr3_-_8064649_8064649 0.97 AT3G22800.1
AT3G22800
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr2_+_11809279_11809279 0.97 AT2G27690.1
CYP94C1
cytochrome P450, family 94, subfamily C, polypeptide 1
arTal_v1_Chr2_-_16070664_16070664 0.97 AT2G38360.1
PRA1.B4
prenylated RAB acceptor 1.B4
arTal_v1_Chr1_+_2927502_2927502 0.95 AT1G09070.1
SRC2
soybean gene regulated by cold-2
arTal_v1_Chr4_+_18519599_18519599 0.95 AT4G39940.1
AKN2
APS-kinase 2
arTal_v1_Chr3_+_22142856_22142856 0.95 AT3G59940.1
AT3G59940
Galactose oxidase/kelch repeat superfamily protein
arTal_v1_Chr1_+_18542061_18542061 0.95 AT1G50040.1
AT1G50040
formin-like protein, putative (DUF1005)
arTal_v1_Chr4_-_12886902_12887011 0.95 AT4G25100.2
AT4G25100.5
FSD1
Fe superoxide dismutase 1
arTal_v1_Chr3_-_21293158_21293171 0.94 AT3G57520.2
AT3G57520.3
AT3G57520.1
SIP2
seed imbibition 2
arTal_v1_Chr3_-_7855791_7855814 0.94 AT3G22235.1
AT3G22235.2
AT3G22235
cysteine-rich TM module stress tolerance protein
arTal_v1_Chr3_-_7864895_7864895 0.94 AT3G22240.1
AT3G22240
cysteine-rich/transmembrane domain PCC1-like protein
arTal_v1_Chr3_+_9409160_9409160 0.93 AT3G25780.1
AOC3
allene oxide cyclase 3
arTal_v1_Chr1_-_2746526_2746526 0.93 AT1G08630.4
THA1
threonine aldolase 1
arTal_v1_Chr2_-_15014147_15014284 0.93 AT2G35710.3
AT2G35710.4
AT2G35710.1
PGSIP7
Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr4_+_4886962_4886962 0.93 AT4G08040.1
ACS11
1-aminocyclopropane-1-carboxylate synthase 11
arTal_v1_Chr4_-_524249_524249 0.93 AT4G01250.1
WRKY22
WRKY family transcription factor
arTal_v1_Chr5_-_17831336_17831336 0.92 AT5G44260.1
AT5G44260
Zinc finger C-x8-C-x5-C-x3-H type family protein
arTal_v1_Chr1_-_2746740_2746740 0.92 AT1G08630.3
THA1
threonine aldolase 1
arTal_v1_Chr5_+_3423381_3423381 0.92 AT5G10830.1
AT5G10830
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr5_+_14912659_14912659 0.92 AT5G37540.1
AT5G37540
Eukaryotic aspartyl protease family protein
arTal_v1_Chr1_-_2747243_2747243 0.92 AT1G08630.1
THA1
threonine aldolase 1
arTal_v1_Chr3_+_21059785_21059785 0.89 AT3G56880.1
AT3G56880
VQ motif-containing protein
arTal_v1_Chr1_+_28053030_28053030 0.89 AT1G74670.1
GASA6
Gibberellin-regulated family protein
arTal_v1_Chr2_+_11037303_11037367 0.89 AT2G25890.2
AT2G25890.1
AT2G25890
Oleosin family protein
arTal_v1_Chr4_+_15230008_15230008 0.88 AT4G31380.1
FLP1
flowering-promoting factor-like protein
arTal_v1_Chr5_-_6413259_6413311 0.88 AT5G19110.1
AT5G19110.2
AT5G19110
Eukaryotic aspartyl protease family protein
arTal_v1_Chr4_-_13460105_13460105 0.88 AT4G26690.1
SHV3
PLC-like phosphodiesterase family protein
arTal_v1_Chr1_-_8912642_8912642 0.87 AT1G25400.2
AT1G25400
transmembrane protein
arTal_v1_Chr1_+_28472357_28472357 0.87 AT1G75830.1
LCR67
low-molecular-weight cysteine-rich 67
arTal_v1_Chr5_-_7366799_7366799 0.87 AT5G22250.1
CAF1b
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
arTal_v1_Chr4_+_13297695_13297803 0.86 AT4G26260.1
AT4G26260.2
MIOX4
myo-inositol oxygenase 4
arTal_v1_Chr1_-_8912822_8912822 0.86 AT1G25400.1
AT1G25400
transmembrane protein
arTal_v1_Chr1_+_3777236_3777236 0.86 AT1G11260.1
STP1
sugar transporter 1
arTal_v1_Chr3_-_18804731_18804731 0.85 AT3G50640.1
AT3G50640
hypothetical protein
arTal_v1_Chr5_-_26906517_26906524 0.84 AT5G67420.1
AT5G67420.2
LBD37
LOB domain-containing protein 37
arTal_v1_Chr5_-_18371021_18371021 0.84 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
arTal_v1_Chr4_-_17355891_17356037 0.84 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
arTal_v1_Chr1_-_27998821_27998821 0.84 AT1G74500.1
BS1
activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1
arTal_v1_Chr2_+_3618058_3618058 0.84 AT2G08986.1
AT2G08986
hypothetical protein
arTal_v1_Chr3_-_8290164_8290164 0.84 AT3G23230.1
TDR1
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_-_20940895_20940895 0.84 AT5G51550.1
EXL3
EXORDIUM like 3
arTal_v1_Chr1_-_6782216_6782216 0.84 AT1G19610.1
PDF1.4
defensin-like protein
arTal_v1_Chr5_+_448092_448189 0.83 AT5G02230.1
AT5G02230.3
AT5G02230.2
AT5G02230
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr5_+_4087689_4087689 0.83 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_-_575085_575085 0.83 AT1G02660.1
AT1G02660
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr1_+_28746833_28746833 0.83 AT1G76600.1
AT1G76600
poly polymerase
arTal_v1_Chr5_-_26607012_26607012 0.83 AT5G66650.1
AT5G66650
calcium uniporter (DUF607)
arTal_v1_Chr5_-_122507_122525 0.83 AT5G01300.2
AT5G01300.1
AT5G01300.3
AT5G01300
PEBP (phosphatidylethanolamine-binding protein) family protein
arTal_v1_Chr4_-_17777445_17777445 0.82 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
arTal_v1_Chr4_-_17672353_17672353 0.82 AT4G37610.1
BT5
BTB and TAZ domain protein 5
arTal_v1_Chr1_-_19672021_19672021 0.82 AT1G52827.1
CDT1
cadmium tolerance 1
arTal_v1_Chr4_+_9759203_9759203 0.82 AT4G17500.1
ERF-1
ethylene responsive element binding factor 1
arTal_v1_Chr2_-_108803_108829 0.82 AT2G01180.7
AT2G01180.2
AT2G01180.5
AT2G01180.1
AT2G01180.8
AT2G01180.4
AT2G01180.3
PAP1
phosphatidic acid phosphatase 1
arTal_v1_Chr1_-_28581315_28581315 0.81 AT1G76160.1
sks5
SKU5 similar 5
arTal_v1_Chr1_+_25574381_25574381 0.81 AT1G68238.1
AT1G68238
transmembrane protein
arTal_v1_Chr4_+_14087556_14087567 0.81 AT4G28520.1
AT4G28520.2
AT4G28520.4
AT4G28520.5
AT4G28520.3
CRU3
cruciferin 3
arTal_v1_Chr1_+_7696427_7696427 0.81 AT1G21910.1
DREB26
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr3_+_17879542_17879542 0.81 AT3G48280.1
CYP71A25
cytochrome P450, family 71, subfamily A, polypeptide 25
arTal_v1_Chr5_+_6282881_6282881 0.81 AT5G18840.1
AT5G18840
Major facilitator superfamily protein
arTal_v1_Chr2_-_16111911_16111911 0.81 AT2G38480.1
AT2G38480
Uncharacterized protein family (UPF0497)
arTal_v1_Chr5_-_20191604_20191604 0.80 AT5G49690.1
AT5G49690
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr1_-_13456336_13456336 0.80 AT1G36060.1
AT1G36060
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr5_+_25033471_25033471 0.79 AT5G62340.1
AT5G62340
Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr3_+_23266227_23266227 0.79 AT3G62950.1
AT3G62950
Thioredoxin superfamily protein
arTal_v1_Chr5_-_23306440_23306440 0.78 AT5G57550.1
XTH25
xyloglucan endotransglucosylase/hydrolase 25
arTal_v1_Chr4_+_13275200_13275200 0.78 AT4G26200.1
ACS7
1-amino-cyclopropane-1-carboxylate synthase 7
arTal_v1_Chr4_-_11896480_11896480 0.78 AT4G22590.1
TPPG
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr1_+_27188036_27188036 0.78 AT1G72230.1
AT1G72230
Cupredoxin superfamily protein
arTal_v1_Chr1_+_10244453_10244453 0.78 AT1G29290.1
AT1G29290
B-cell lymphoma 6 protein
arTal_v1_Chr2_+_17137829_17137846 0.78 AT2G41100.4
AT2G41100.7
TCH3
Calcium-binding EF hand family protein
arTal_v1_Chr4_+_14517393_14517393 0.78 AT4G29610.1
AT4G29610
Cytidine/deoxycytidylate deaminase family protein
arTal_v1_Chr4_+_160643_160643 0.78 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
arTal_v1_Chr3_+_21621994_21622002 0.77 AT3G58450.2
AT3G58450.1
AT3G58450
Adenine nucleotide alpha hydrolases-like superfamily protein
arTal_v1_Chr5_-_26519242_26519242 0.77 AT5G66400.2
RAB18
Dehydrin family protein
arTal_v1_Chr2_+_17137427_17137431 0.77 AT2G41100.5
AT2G41100.6
TCH3
Calcium-binding EF hand family protein
arTal_v1_Chr3_+_5121303_5121303 0.77 AT3G15210.1
ERF4
ethylene responsive element binding factor 4
arTal_v1_Chr1_+_17123785_17123821 0.76 AT1G45201.3
AT1G45201.1
AT1G45201.2
TLL1
triacylglycerol lipase-like 1
arTal_v1_Chr2_-_6960216_6960216 0.76 AT2G16005.1
AT2G16005
MD-2-related lipid recognition domain-containing protein
arTal_v1_Chr2_+_11985687_11985687 0.76 AT2G28120.1
AT2G28120
Major facilitator superfamily protein
arTal_v1_Chr3_+_5471735_5471735 0.75 AT3G16150.1
ASPGB1
N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
arTal_v1_Chr1_+_12237547_12237547 0.75 AT1G33760.1
AT1G33760
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr4_-_17041131_17041131 0.75 AT4G36010.2
AT4G36010
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr4_-_17041326_17041326 0.75 AT4G36010.1
AT4G36010
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr1_-_21063047_21063047 0.75 AT1G56250.1
PP2-B14
phloem protein 2-B14
arTal_v1_Chr4_+_14368877_14368877 0.75 AT4G29140.1
ADS1
MATE efflux family protein
arTal_v1_Chr3_-_8589754_8589754 0.74 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
arTal_v1_Chr5_+_18905258_18905272 0.74 AT5G46590.1
AT5G46590.2
NAC096
NAC domain containing protein 96
arTal_v1_Chr4_-_11585391_11585391 0.74 AT4G21830.2
MSRB7
methionine sulfoxide reductase B7
arTal_v1_Chr4_-_11585542_11585542 0.74 AT4G21830.1
MSRB7
methionine sulfoxide reductase B7
arTal_v1_Chr3_+_19742687_19742687 0.73 AT3G53250.2
AT3G53250
SAUR-like auxin-responsive protein family
arTal_v1_Chr5_+_8161928_8161928 0.73 AT5G24130.1
AT5G24130
polypyrimidine tract-binding-like protein
arTal_v1_Chr2_+_17138065_17138065 0.73 AT2G41100.1
TCH3
Calcium-binding EF hand family protein
arTal_v1_Chr1_+_20151016_20151016 0.73 AT1G53990.1
GLIP3
GDSL-motif lipase 3
arTal_v1_Chr4_-_14886784_14886784 0.73 AT4G30450.1
AT4G30450
glycine-rich protein
arTal_v1_Chr2_-_6867004_6867004 0.73 AT2G15760.1
AT2G15760
calmodulin-binding protein (DUF1645)
arTal_v1_Chr2_+_17138330_17138330 0.72 AT2G41100.2
TCH3
Calcium-binding EF hand family protein
arTal_v1_Chr2_-_15013368_15013368 0.72 AT2G35710.2
PGSIP7
Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr2_+_7606728_7606905 0.72 AT2G17500.2
AT2G17500.1
AT2G17500.3
AT2G17500.4
AT2G17500
Auxin efflux carrier family protein
arTal_v1_Chr2_+_7209108_7209108 0.72 AT2G16630.1
AT2G16630
Pollen Ole e 1 allergen and extensin family protein
arTal_v1_Chr3_+_7770899_7770899 0.72 AT3G22060.1
AT3G22060
Receptor-like protein kinase-related family protein
arTal_v1_Chr5_-_26519447_26519447 0.72 AT5G66400.1
RAB18
Dehydrin family protein
arTal_v1_Chr5_+_3377652_3377663 0.71 AT5G10695.1
AT5G10695.2
AT5G10695
methionyl-tRNA synthetase
arTal_v1_Chr5_+_1672070_1672096 0.71 AT5G05600.1
AT5G05600.2
AT5G05600
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr1_+_852151_852151 0.71 AT1G03440.1
AT1G03440
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr3_-_5254458_5254562 0.71 AT3G15530.2
AT3G15530.1
AT3G15530
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr3_-_6491429_6491429 0.71 AT3G18830.1
PMT5
polyol/monosaccharide transporter 5
arTal_v1_Chr5_-_22358381_22358413 0.70 AT5G55090.1
AT5G55090.2
MAPKKK15
mitogen-activated protein kinase kinase kinase 15
arTal_v1_Chr4_-_16740601_16740601 0.70 AT4G35180.2
AT4G35180.1
LHT7
LYS/HIS transporter 7
arTal_v1_Chr1_+_29178705_29178705 0.70 AT1G77640.1
AT1G77640
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr2_+_17137037_17137037 0.70 AT2G41100.3
TCH3
Calcium-binding EF hand family protein
arTal_v1_Chr1_+_739544_739678 0.70 AT1G03090.2
AT1G03090.1
MCCA
methylcrotonyl-CoA carboxylase alpha chain
arTal_v1_Chr2_-_17441416_17441416 0.69 AT2G41810.1
AT2G41810
imidazolonepropionase (Protein of unknown function, DUF642)
arTal_v1_Chr5_-_19629167_19629167 0.69 AT5G48430.1
AT5G48430
Eukaryotic aspartyl protease family protein
arTal_v1_Chr3_+_19742854_19742854 0.69 AT3G53250.1
AT3G53250
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_+_30241452_30241452 0.68 AT1G80440.1
AT1G80440
Galactose oxidase/kelch repeat superfamily protein
arTal_v1_Chr1_-_26765285_26765285 0.68 AT1G70985.1
AT1G70985
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr5_+_7172604_7172687 0.68 AT5G21105.1
AT5G21105.3
AT5G21105
Plant L-ascorbate oxidase
arTal_v1_Chr4_+_11934969_11934969 0.68 AT4G22710.1
CYP706A2
cytochrome P450, family 706, subfamily A, polypeptide 2
arTal_v1_Chr5_-_25661007_25661007 0.68 AT5G64120.1
AT5G64120
Peroxidase superfamily protein
arTal_v1_Chr4_-_11623797_11623886 0.68 AT4G21903.2
AT4G21903.1
AT4G21903
MATE efflux family protein
arTal_v1_Chr4_-_14880331_14880331 0.67 AT4G30430.1
TET9
tetraspanin9
arTal_v1_Chr5_+_8042853_8042876 0.67 AT5G23860.1
AT5G23860.2
TUB8
tubulin beta 8
arTal_v1_Chr5_-_24987811_24987811 0.67 AT5G62210.1
AT5G62210
Embryo-specific protein 3, (ATS3)
arTal_v1_Chr1_-_4970007_4970007 0.67 AT1G14520.2
MIOX1
myo-inositol oxygenase 1
arTal_v1_Chr2_-_15137012_15137012 0.67 AT2G36050.1
OFP15
ovate family protein 15
arTal_v1_Chr1_+_6389399_6389399 0.67 AT1G18570.1
MYB51
myb domain protein 51
arTal_v1_Chr1_+_25053673_25053673 0.67 AT1G67100.1
LBD40
LOB domain-containing protein 40
arTal_v1_Chr2_-_12149072_12149072 0.67 AT2G28400.1
AT2G28400
senescence regulator (Protein of unknown function, DUF584)
arTal_v1_Chr2_-_17115047_17115047 0.67 AT2G41010.1
CAMBP25
calmodulin (CAM)-binding protein of 25 kDa
arTal_v1_Chr2_-_16359943_16359943 0.67 AT2G39200.1
MLO12
Seven transmembrane MLO family protein
arTal_v1_Chr3_+_23182722_23182722 0.66 AT3G62680.1
PRP3
proline-rich protein 3
arTal_v1_Chr5_-_26114545_26114545 0.66 AT5G65340.1
AT5G65340
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
arTal_v1_Chr5_-_19385869_19385869 0.66 AT5G47870.1
RAD52-2
cobalt ion-binding protein
arTal_v1_Chr5_-_4574541_4574679 0.66 AT5G14180.3
AT5G14180.5
AT5G14180.1
MPL1
Myzus persicae-induced lipase 1
arTal_v1_Chr2_-_16865587_16865587 0.66 AT2G40380.1
PRA1.B2
prenylated RAB acceptor 1.B2
arTal_v1_Chr5_+_26266180_26266266 0.65 AT5G65690.1
AT5G65690.2
AT5G65690.3
AT5G65690.4
PCK2
phosphoenolpyruvate carboxykinase 2
arTal_v1_Chr1_+_30383561_30383561 0.65 AT1G80840.1
WRKY40
WRKY DNA-binding protein 40
arTal_v1_Chr2_-_18306395_18306395 0.65 AT2G44290.1
AT2G44290
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr4_+_13611796_13611796 0.65 AT4G27160.1
SESA3
seed storage albumin 3
arTal_v1_Chr2_+_15553651_15553651 0.65 AT2G37030.1
AT2G37030
SAUR-like auxin-responsive protein family
arTal_v1_Chr1_+_27141765_27141765 0.65 AT1G72140.1
AT1G72140
Major facilitator superfamily protein
arTal_v1_Chr5_+_4370692_4370692 0.65 AT5G13580.1
ABCG6
ABC-2 type transporter family protein
arTal_v1_Chr2_-_108231_108231 0.64 AT2G01180.6
PAP1
phosphatidic acid phosphatase 1
arTal_v1_Chr3_-_7113899_7113899 0.64 AT3G20395.1
AT3G20395
RING/U-box superfamily protein
arTal_v1_Chr2_-_832619_832619 0.64 AT2G02860.2
AT2G02860.1
SUT2
sucrose transporter 2
arTal_v1_Chr5_+_7173926_7173926 0.64 AT5G21105.2
AT5G21105
Plant L-ascorbate oxidase
arTal_v1_Chr2_+_11178064_11178110 0.64 AT2G26260.1
AT2G26260.2
3BETAHSD/D2
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
arTal_v1_Chr3_-_15617309_15617309 0.64 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr3_-_15617149_15617149 0.64 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr1_+_7886323_7886323 0.64 AT1G22330.1
AT1G22330
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr3_-_6980523_6980523 0.63 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
arTal_v1_Chr1_-_23013477_23013601 0.63 AT1G62290.5
AT1G62290.6
AT1G62290.1
AT1G62290.3
AT1G62290.4
AT1G62290.2
AT1G62290
Saposin-like aspartyl protease family protein
arTal_v1_Chr5_+_17984527_17984527 0.63 AT5G44585.1
AT5G44585
hypothetical protein
arTal_v1_Chr3_+_19284339_19284339 0.63 AT3G51970.1
ASAT1
acyl-CoA sterol acyl transferase 1

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G46830

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 4.2 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.7 4.0 GO:0006567 threonine catabolic process(GO:0006567)
0.6 2.8 GO:0019310 inositol catabolic process(GO:0019310)
0.4 1.3 GO:0015840 urea transport(GO:0015840)
0.4 1.1 GO:0033530 raffinose metabolic process(GO:0033530)
0.3 2.1 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.3 1.4 GO:0006097 glyoxylate cycle(GO:0006097)
0.3 1.2 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.3 1.7 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.3 0.8 GO:0034486 hexose transport(GO:0008645) fructose transport(GO:0015755) vacuolar transmembrane transport(GO:0034486)
0.3 0.8 GO:0016046 detection of fungus(GO:0016046)
0.3 2.7 GO:0009652 thigmotropism(GO:0009652)
0.3 0.8 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.2 1.7 GO:0046133 pyrimidine ribonucleoside catabolic process(GO:0046133) pyrimidine nucleoside catabolic process(GO:0046135)
0.2 0.7 GO:0080145 cysteine homeostasis(GO:0080145)
0.2 1.7 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.2 3.6 GO:0019430 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.2 1.0 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
0.2 1.4 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.2 0.6 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.2 0.2 GO:0010254 nectary development(GO:0010254)
0.2 1.8 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.2 0.6 GO:0090480 GDP-mannose transport(GO:0015784) purine nucleotide-sugar transmembrane transport(GO:0090480) GDP-mannose transmembrane transport(GO:1990570)
0.2 1.6 GO:0031222 arabinan catabolic process(GO:0031222)
0.2 0.7 GO:0010351 lithium ion transport(GO:0010351)
0.2 0.7 GO:0006083 acetate metabolic process(GO:0006083) acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.2 0.6 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.2 0.6 GO:0055089 fatty acid homeostasis(GO:0055089)
0.2 1.1 GO:0052317 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.2 0.5 GO:0090058 metaxylem development(GO:0090058)
0.2 0.7 GO:0010432 bract development(GO:0010432)
0.2 1.9 GO:0000304 response to singlet oxygen(GO:0000304)
0.2 0.5 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.2 0.5 GO:0016540 protein autoprocessing(GO:0016540)
0.2 0.5 GO:0032196 transposition(GO:0032196)
0.2 0.8 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.2 0.5 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.2 1.4 GO:0015749 monosaccharide transport(GO:0015749)
0.2 0.9 GO:0031929 TOR signaling(GO:0031929)
0.2 0.8 GO:1902065 response to L-glutamate(GO:1902065)
0.2 0.8 GO:0046622 positive regulation of organ growth(GO:0046622)
0.2 0.9 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 0.3 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.1 1.5 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.1 1.0 GO:0006597 spermine biosynthetic process(GO:0006597)
0.1 1.0 GO:0009099 valine biosynthetic process(GO:0009099)
0.1 0.6 GO:0099636 cytoplasmic streaming(GO:0099636)
0.1 0.4 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.1 1.1 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.1 2.3 GO:1901072 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.1 0.7 GO:0010226 response to lithium ion(GO:0010226)
0.1 0.8 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.1 0.8 GO:0048830 adventitious root development(GO:0048830)
0.1 1.2 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
0.1 0.9 GO:0006552 leucine catabolic process(GO:0006552)
0.1 0.4 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.1 0.5 GO:0010353 response to trehalose(GO:0010353)
0.1 1.4 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.1 0.6 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.1 0.6 GO:0010032 meiotic chromosome condensation(GO:0010032)
0.1 0.9 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.1 0.4 GO:0033194 response to hydroperoxide(GO:0033194)
0.1 0.4 GO:0044277 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.1 0.6 GO:0006272 leading strand elongation(GO:0006272)
0.1 0.6 GO:0007043 cell-cell junction assembly(GO:0007043)
0.1 0.6 GO:0016137 glycoside metabolic process(GO:0016137)
0.1 0.4 GO:0019367 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.1 0.3 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.1 0.3 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 1.1 GO:0050691 regulation of defense response to virus by host(GO:0050691)
0.1 0.3 GO:0010198 synergid death(GO:0010198)
0.1 1.2 GO:0052547 negative regulation of peptidase activity(GO:0010466) regulation of peptidase activity(GO:0052547)
0.1 0.3 GO:0042908 xenobiotic transport(GO:0042908)
0.1 0.9 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.1 0.4 GO:0048640 negative regulation of developmental growth(GO:0048640)
0.1 0.3 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.1 0.4 GO:0070509 calcium ion import(GO:0070509)
0.1 1.7 GO:0010093 specification of floral organ identity(GO:0010093)
0.1 0.2 GO:1903793 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.1 0.5 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 1.0 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 0.3 GO:0009204 deoxyribonucleoside triphosphate catabolic process(GO:0009204) deoxyribose phosphate catabolic process(GO:0046386)
0.1 0.3 GO:0030638 polyketide metabolic process(GO:0030638)
0.1 2.8 GO:0050826 response to freezing(GO:0050826)
0.1 0.4 GO:0048462 transmitting tissue development(GO:0010500) carpel formation(GO:0048462)
0.1 0.2 GO:0070207 protein trimerization(GO:0070206) protein homotrimerization(GO:0070207)
0.1 0.2 GO:0017145 stem cell division(GO:0017145)
0.1 1.7 GO:0009901 anther dehiscence(GO:0009901)
0.1 0.3 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.1 1.5 GO:0070298 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.1 1.3 GO:0006949 syncytium formation(GO:0006949)
0.1 0.6 GO:0006013 mannose metabolic process(GO:0006013)
0.1 0.7 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.1 0.3 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.1 1.0 GO:1990414 replication-born double-strand break repair via sister chromatid exchange(GO:1990414)
0.1 0.2 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.1 0.4 GO:0052746 inositol phosphorylation(GO:0052746)
0.1 3.1 GO:0016126 sterol biosynthetic process(GO:0016126)
0.1 0.8 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.1 0.5 GO:0000710 meiotic mismatch repair(GO:0000710)
0.1 0.3 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.1 1.8 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 0.6 GO:0080187 floral organ senescence(GO:0080187)
0.1 0.3 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 1.0 GO:0006560 proline metabolic process(GO:0006560)
0.1 1.4 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 1.2 GO:0010274 hydrotropism(GO:0010274)
0.1 0.8 GO:0009435 NAD biosynthetic process(GO:0009435)
0.1 0.4 GO:0019673 GDP-mannose metabolic process(GO:0019673)
0.1 1.1 GO:0046620 regulation of organ growth(GO:0046620)
0.1 0.8 GO:1901957 regulation of cutin biosynthetic process(GO:1901957) positive regulation of cutin biosynthetic process(GO:1901959)
0.1 0.4 GO:0043692 monoterpene metabolic process(GO:0043692)
0.1 0.3 GO:0031542 positive regulation of anthocyanin biosynthetic process(GO:0031542)
0.1 0.2 GO:0016124 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.1 0.4 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.1 0.3 GO:0010185 regulation of cellular defense response(GO:0010185)
0.1 0.4 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 0.1 GO:0009143 nucleoside triphosphate catabolic process(GO:0009143)
0.1 1.0 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.1 0.6 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.1 10.6 GO:0010200 response to chitin(GO:0010200)
0.1 0.2 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.1 2.5 GO:0042335 cuticle development(GO:0042335)
0.1 0.4 GO:0051014 actin filament severing(GO:0051014)
0.1 0.7 GO:0018344 protein geranylgeranylation(GO:0018344)
0.1 1.8 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.1 0.5 GO:0006821 chloride transport(GO:0006821)
0.1 1.4 GO:0015743 malate transport(GO:0015743)
0.1 2.4 GO:0006829 zinc II ion transport(GO:0006829)
0.1 0.3 GO:0030307 positive regulation of cell growth(GO:0030307)
0.1 0.7 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 0.2 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 0.6 GO:0009750 response to fructose(GO:0009750)
0.1 0.4 GO:0043617 cellular response to sucrose starvation(GO:0043617)
0.1 0.3 GO:0010482 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.1 0.7 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.1 0.8 GO:0010076 maintenance of floral meristem identity(GO:0010076)
0.1 0.9 GO:0052541 plant-type cell wall cellulose metabolic process(GO:0052541)
0.1 0.3 GO:0000012 single strand break repair(GO:0000012)
0.1 2.5 GO:0009690 cytokinin metabolic process(GO:0009690)
0.1 1.3 GO:0031048 chromatin silencing by small RNA(GO:0031048)
0.1 0.5 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 0.4 GO:0015689 molybdate ion transport(GO:0015689)
0.1 0.7 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.1 0.3 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.1 1.5 GO:0019915 lipid storage(GO:0019915)
0.1 1.8 GO:0042330 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.1 0.2 GO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045737) positive regulation of cyclin-dependent protein kinase activity(GO:1904031)
0.1 0.2 GO:0048645 organ formation(GO:0048645)
0.1 0.1 GO:0010338 leaf formation(GO:0010338)
0.1 0.3 GO:0097501 stress response to metal ion(GO:0097501)
0.1 0.2 GO:0048451 petal formation(GO:0048451)
0.1 0.2 GO:1904667 negative regulation of protein ubiquitination(GO:0031397) negative regulation of ligase activity(GO:0051352) negative regulation of ubiquitin-protein transferase activity(GO:0051444) negative regulation of ubiquitin protein ligase activity(GO:1904667)
0.1 0.7 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.1 0.4 GO:1903428 positive regulation of reactive oxygen species biosynthetic process(GO:1903428)
0.1 1.6 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.1 0.2 GO:0097033 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.1 0.4 GO:0016115 sesquiterpenoid catabolic process(GO:0016107) terpenoid catabolic process(GO:0016115) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.2 GO:0035964 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.1 0.1 GO:0017157 regulation of exocytosis(GO:0017157)
0.1 0.6 GO:0032409 regulation of transporter activity(GO:0032409)
0.1 0.8 GO:0010187 negative regulation of seed germination(GO:0010187)
0.1 0.3 GO:0006531 2-oxoglutarate metabolic process(GO:0006103) aspartate metabolic process(GO:0006531)
0.1 0.2 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.1 1.8 GO:0005991 trehalose metabolic process(GO:0005991)
0.1 0.3 GO:0070141 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.1 0.2 GO:0017196 N-terminal protein amino acid acetylation(GO:0006474) N-terminal peptidyl-methionine acetylation(GO:0017196)
0.1 1.3 GO:0009686 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)
0.1 0.4 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 0.2 GO:0071836 nectar secretion(GO:0071836)
0.1 0.2 GO:0032000 positive regulation of fatty acid beta-oxidation(GO:0032000) positive regulation of lipid catabolic process(GO:0050996)
0.1 0.8 GO:0048829 root cap development(GO:0048829)
0.1 2.4 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 0.3 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 0.2 GO:0006729 tetrahydrobiopterin biosynthetic process(GO:0006729) tetrahydrobiopterin metabolic process(GO:0046146)
0.1 0.6 GO:0043155 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.1 0.2 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.1 1.1 GO:0019853 L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.2 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 0.3 GO:0010215 cellulose microfibril organization(GO:0010215)
0.0 0.6 GO:0034063 stress granule assembly(GO:0034063)
0.0 0.2 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 1.4 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.2 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.0 0.8 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 0.6 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.6 GO:0015693 magnesium ion transport(GO:0015693)
0.0 0.2 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.0 0.3 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.2 GO:0010047 fruit dehiscence(GO:0010047)
0.0 0.1 GO:1902586 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.0 0.4 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 4.6 GO:0010410 hemicellulose metabolic process(GO:0010410)
0.0 0.2 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.0 0.3 GO:0071902 positive regulation of protein serine/threonine kinase activity(GO:0071902)
0.0 0.6 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.0 0.9 GO:0009693 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 1.7 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 3.6 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 0.3 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.0 0.0 GO:0019852 L-ascorbic acid metabolic process(GO:0019852)
0.0 0.5 GO:0000076 DNA replication checkpoint(GO:0000076)
0.0 0.1 GO:2000045 chromatin silencing at telomere(GO:0006348) DNA replication preinitiation complex assembly(GO:0071163) regulation of G1/S transition of mitotic cell cycle(GO:2000045)
0.0 0.3 GO:0044211 CTP salvage(GO:0044211)
0.0 0.2 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.0 0.3 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.3 GO:0006915 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.0 0.3 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.0 1.0 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.3 GO:0048766 root hair initiation(GO:0048766)
0.0 0.7 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.5 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 0.4 GO:2001289 lipid X metabolic process(GO:2001289)
0.0 0.9 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.8 GO:0009556 microsporogenesis(GO:0009556)
0.0 0.5 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.3 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 0.5 GO:0019511 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.4 GO:0015914 phospholipid transport(GO:0015914)
0.0 0.5 GO:0006521 regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238)
0.0 1.6 GO:0045292 mRNA cis splicing, via spliceosome(GO:0045292)
0.0 0.0 GO:0072698 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 1.9 GO:0071369 cellular response to ethylene stimulus(GO:0071369)
0.0 0.1 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.0 0.2 GO:2000014 regulation of endosperm development(GO:2000014)
0.0 2.7 GO:0045490 pectin catabolic process(GO:0045490)
0.0 1.2 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 0.9 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.4 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.4 GO:0051220 protein retention in ER lumen(GO:0006621) maintenance of protein localization in endoplasmic reticulum(GO:0035437) cytoplasmic sequestering of protein(GO:0051220)
0.0 0.1 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.0 0.7 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.0 0.2 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.0 0.3 GO:0046246 terpene biosynthetic process(GO:0046246)
0.0 1.5 GO:0048278 vesicle docking(GO:0048278)
0.0 0.3 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.0 0.2 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 0.3 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.1 GO:0010422 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.0 0.4 GO:0006826 iron ion transport(GO:0006826)
0.0 0.5 GO:0019374 galactolipid metabolic process(GO:0019374)
0.0 0.1 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.0 0.2 GO:0046688 response to copper ion(GO:0046688)
0.0 0.5 GO:0009083 branched-chain amino acid catabolic process(GO:0009083)
0.0 0.1 GO:0018206 peptidyl-methionine modification(GO:0018206)
0.0 4.4 GO:0071456 cellular response to hypoxia(GO:0071456)
0.0 0.1 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.0 0.3 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.0 GO:0080051 cutin transport(GO:0080051)
0.0 0.4 GO:0006568 tryptophan metabolic process(GO:0006568) indolalkylamine metabolic process(GO:0006586)
0.0 0.1 GO:0009662 etioplast organization(GO:0009662)
0.0 0.7 GO:0031124 mRNA 3'-end processing(GO:0031124)
0.0 2.7 GO:0009860 pollen tube growth(GO:0009860)
0.0 0.4 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.2 GO:0010222 stem vascular tissue pattern formation(GO:0010222)
0.0 0.6 GO:0009846 pollen germination(GO:0009846)
0.0 0.4 GO:0006098 pentose-phosphate shunt(GO:0006098)
0.0 0.8 GO:0042181 ketone biosynthetic process(GO:0042181)
0.0 0.2 GO:0010262 somatic embryogenesis(GO:0010262)
0.0 0.1 GO:0072337 modified amino acid transport(GO:0072337)
0.0 0.1 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.0 0.1 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.0 0.1 GO:0080186 developmental vegetative growth(GO:0080186)
0.0 0.6 GO:0048868 pollen tube development(GO:0048868)
0.0 0.2 GO:0001709 cell fate determination(GO:0001709)
0.0 1.2 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.1 GO:1904961 quiescent center organization(GO:1904961)
0.0 0.1 GO:0015938 purine ribonucleotide catabolic process(GO:0009154) ribonucleotide catabolic process(GO:0009261) coenzyme A catabolic process(GO:0015938) nucleoside bisphosphate catabolic process(GO:0033869) ribonucleoside bisphosphate catabolic process(GO:0034031) purine nucleoside bisphosphate catabolic process(GO:0034034)
0.0 0.4 GO:0001666 response to hypoxia(GO:0001666)
0.0 0.2 GO:0048658 anther wall tapetum development(GO:0048658)
0.0 0.4 GO:0006415 translational termination(GO:0006415)
0.0 0.8 GO:0009809 lignin biosynthetic process(GO:0009809)
0.0 0.1 GO:0002188 translation reinitiation(GO:0002188)
0.0 0.2 GO:0000086 G2/M transition of mitotic cell cycle(GO:0000086) cell cycle G2/M phase transition(GO:0044839)
0.0 0.2 GO:0010044 response to aluminum ion(GO:0010044)
0.0 0.1 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.0 0.2 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0 0.1 GO:0005980 glycogen catabolic process(GO:0005980)
0.0 0.5 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)
0.0 0.2 GO:0006298 mismatch repair(GO:0006298)
0.0 0.1 GO:0010480 microsporocyte differentiation(GO:0010480)
0.0 0.3 GO:0010584 pollen exine formation(GO:0010584)
0.0 0.2 GO:0015770 sucrose transport(GO:0015770)
0.0 0.7 GO:0010311 lateral root formation(GO:0010311)
0.0 0.1 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.0 0.0 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.0 0.0 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.1 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.0 0.3 GO:0080155 regulation of fertilization(GO:0080154) regulation of double fertilization forming a zygote and endosperm(GO:0080155)
0.0 0.1 GO:0009304 tRNA transcription(GO:0009304)
0.0 0.1 GO:0006624 vacuolar protein processing(GO:0006624)
0.0 0.0 GO:1902117 positive regulation of organelle assembly(GO:1902117)
0.0 0.0 GO:0010454 negative regulation of cell fate commitment(GO:0010454)
0.0 0.1 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.0 0.3 GO:0007062 sister chromatid cohesion(GO:0007062)
0.0 0.1 GO:0045740 positive regulation of DNA replication(GO:0045740)
0.0 0.1 GO:0045839 negative regulation of mitotic nuclear division(GO:0045839)
0.0 0.1 GO:0019264 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.0 0.0 GO:0019477 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.0 0.1 GO:1902025 nitrate import(GO:1902025)
0.0 0.1 GO:0010230 alternative respiration(GO:0010230)
0.0 0.1 GO:0048564 photosystem I assembly(GO:0048564)
0.0 0.2 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.1 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.0 0.1 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 0.0 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.4 GO:0009514 glyoxysome(GO:0009514)
0.4 2.1 GO:0035061 interchromatin granule(GO:0035061)
0.3 0.9 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.3 0.3 GO:0005791 rough endoplasmic reticulum(GO:0005791)
0.2 2.3 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.2 1.2 GO:0034990 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.2 3.8 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.2 0.6 GO:0070505 pollen coat(GO:0070505)
0.2 0.9 GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
0.1 0.4 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.1 0.9 GO:0071339 MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339)
0.1 0.2 GO:0009897 external side of plasma membrane(GO:0009897)
0.1 0.3 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.1 0.4 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 0.6 GO:0031931 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.1 0.3 GO:0032301 MutSalpha complex(GO:0032301)
0.1 0.6 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 0.6 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.1 0.4 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.1 1.2 GO:0010319 stromule(GO:0010319)
0.1 0.4 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.1 0.6 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.1 18.0 GO:0031225 anchored component of membrane(GO:0031225)
0.1 0.4 GO:0043073 germ cell nucleus(GO:0043073)
0.1 1.7 GO:0005811 lipid particle(GO:0005811)
0.1 1.1 GO:0016324 apical plasma membrane(GO:0016324)
0.1 0.2 GO:0045334 clathrin-coated endocytic vesicle(GO:0045334)
0.0 0.7 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.2 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.0 0.3 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.8 GO:0035838 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 0.6 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 1.9 GO:0090406 pollen tube(GO:0090406)
0.0 8.0 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.1 GO:0005656 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.0 0.1 GO:0033185 mannosyltransferase complex(GO:0031501) dolichol-phosphate-mannose synthase complex(GO:0033185)
0.0 0.1 GO:0002178 palmitoyltransferase complex(GO:0002178) serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211)
0.0 3.5 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.5 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.4 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.0 0.2 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 0.3 GO:0005682 U5 snRNP(GO:0005682)
0.0 0.2 GO:0071012 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.0 0.2 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0 0.1 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 1.0 GO:0005764 lysosome(GO:0005764)
0.0 0.2 GO:0009517 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.0 0.1 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.0 0.1 GO:0000782 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.0 0.1 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.4 GO:0071011 precatalytic spliceosome(GO:0071011)
0.0 0.1 GO:0031312 extrinsic component of organelle membrane(GO:0031312)
0.0 51.3 GO:0005576 extracellular region(GO:0005576)
0.0 0.5 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.1 GO:0005844 polysome(GO:0005844)
0.0 1.3 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.4 GO:0005881 cytoplasmic microtubule(GO:0005881)
0.0 0.2 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.0 0.1 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.1 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 0.2 GO:0009986 cell surface(GO:0009986)
0.0 0.2 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.0 0.3 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.2 GO:1902495 transmembrane transporter complex(GO:1902495)
0.0 0.2 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.1 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.0 0.2 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 2.9 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.0 0.1 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 4.2 GO:0004793 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.6 2.8 GO:0050113 inositol oxygenase activity(GO:0050113)
0.5 1.5 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.4 1.3 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.4 4.9 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.3 1.4 GO:0080042 ADP-glucose pyrophosphohydrolase activity(GO:0080042)
0.3 2.4 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.3 1.1 GO:0052578 alpha-farnesene synthase activity(GO:0052578)
0.3 0.8 GO:0052628 4-aminobenzoate amino acid synthetase activity(GO:0052625) benzoate amino acid synthetase activity(GO:0052626) vanillate amino acid synthetase activity(GO:0052627) 4-hydroxybenzoate amino acid synthetase activity(GO:0052628)
0.3 2.0 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.3 0.8 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.2 1.7 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.2 0.7 GO:0015292 uniporter activity(GO:0015292)
0.2 0.7 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
0.2 0.7 GO:0000309 nicotinamide-nucleotide adenylyltransferase activity(GO:0000309)
0.2 1.4 GO:0004126 cytidine deaminase activity(GO:0004126)
0.2 0.7 GO:0044540 L-cystine L-cysteine-lyase (deaminating)(GO:0044540)
0.2 0.8 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.2 1.3 GO:0052654 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.2 1.6 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.2 0.6 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.2 0.6 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)
0.2 2.1 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.2 2.2 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.2 0.9 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
0.2 0.9 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.2 2.4 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.2 0.5 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.2 1.8 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.2 0.7 GO:0052740 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.2 1.2 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.2 0.5 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.2 0.5 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.2 0.8 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.2 0.8 GO:0016768 spermine synthase activity(GO:0016768)
0.1 0.7 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.1 1.5 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.1 0.4 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 0.8 GO:0015105 arsenite transmembrane transporter activity(GO:0015105)
0.1 0.7 GO:0016229 steroid dehydrogenase activity(GO:0016229)
0.1 0.4 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.1 0.3 GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen(GO:0016713)
0.1 0.8 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 2.2 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.1 0.6 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 0.9 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.1 0.6 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.1 0.6 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.1 0.4 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.1 0.5 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.1 1.1 GO:0009922 fatty acid elongase activity(GO:0009922)
0.1 0.5 GO:0004385 guanylate kinase activity(GO:0004385)
0.1 0.4 GO:0043812 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.1 0.5 GO:0015603 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.1 1.8 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.1 0.8 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.1 0.6 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.1 0.3 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.1 1.5 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.1 0.3 GO:0045437 uridine nucleosidase activity(GO:0045437) ribosylpyrimidine nucleosidase activity(GO:0050263)
0.1 1.0 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.1 1.1 GO:0052736 beta-glucanase activity(GO:0052736)
0.1 0.3 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.1 1.3 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.9 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.1 1.0 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 2.7 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.3 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.1 1.8 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 1.2 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.1 0.8 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.1 0.4 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.1 1.2 GO:0008061 chitin binding(GO:0008061)
0.1 0.5 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.1 0.6 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 0.4 GO:0070042 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.1 1.2 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) xylanase activity(GO:0097599)
0.1 0.3 GO:0032404 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.1 0.9 GO:0017070 U6 snRNA binding(GO:0017070)
0.1 2.4 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.8 GO:0004806 triglyceride lipase activity(GO:0004806)
0.1 1.5 GO:0010333 terpene synthase activity(GO:0010333)
0.1 2.3 GO:0008810 cellulase activity(GO:0008810)
0.1 0.2 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.1 0.7 GO:0004096 catalase activity(GO:0004096)
0.1 1.7 GO:0000250 lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.1 0.5 GO:0004663 Rab geranylgeranyltransferase activity(GO:0004663)
0.1 1.6 GO:0008308 voltage-gated anion channel activity(GO:0008308)
0.1 1.6 GO:0030599 pectinesterase activity(GO:0030599)
0.1 0.3 GO:0004445 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.1 0.3 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.1 1.5 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 3.0 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.1 0.3 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.3 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.1 0.1 GO:0010334 sesquiterpene synthase activity(GO:0010334)
0.1 1.2 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 0.9 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.1 0.1 GO:0004661 protein geranylgeranyltransferase activity(GO:0004661)
0.1 0.5 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.9 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.1 0.5 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.1 0.6 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.1 0.4 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.5 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.1 0.3 GO:0019156 isoamylase activity(GO:0019156)
0.1 0.3 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.1 2.9 GO:0003993 acid phosphatase activity(GO:0003993)
0.1 0.3 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.1 2.0 GO:0005179 hormone activity(GO:0005179)
0.1 0.2 GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575)
0.1 1.7 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.1 0.2 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.1 0.6 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.1 0.3 GO:0035197 siRNA binding(GO:0035197)
0.1 1.5 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 0.2 GO:0016418 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.1 0.5 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.1 0.2 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.1 0.4 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.1 1.2 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.8 GO:0031543 peptidyl-proline dioxygenase activity(GO:0031543)
0.1 1.5 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 1.4 GO:0010427 abscisic acid binding(GO:0010427)
0.1 0.8 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.1 0.6 GO:0016421 CoA carboxylase activity(GO:0016421) ligase activity, forming carbon-carbon bonds(GO:0016885)
0.1 0.4 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.1 0.2 GO:0070405 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997) ammonium ion binding(GO:0070405)
0.1 0.4 GO:0004383 guanylate cyclase activity(GO:0004383)
0.1 1.1 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.1 0.3 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.1 8.3 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.1 0.8 GO:0004568 chitinase activity(GO:0004568)
0.1 0.2 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.1 0.2 GO:0080102 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.1 0.4 GO:0004834 tryptophan synthase activity(GO:0004834)
0.1 0.3 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.0 0.2 GO:0022842 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.0 0.2 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.0 0.2 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.0 0.4 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.0 0.3 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.0 0.5 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.0 2.2 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.3 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.0 0.9 GO:0015248 sterol transporter activity(GO:0015248)
0.0 2.5 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 1.0 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.0 0.6 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.6 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.3 GO:0004849 uridine kinase activity(GO:0004849)
0.0 1.1 GO:0016832 aldehyde-lyase activity(GO:0016832)
0.0 0.3 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.0 0.1 GO:0019789 SUMO transferase activity(GO:0019789)
0.0 0.4 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.2 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 0.2 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.0 1.6 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.3 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.0 0.1 GO:0004651 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192) polynucleotide phosphatase activity(GO:0098518)
0.0 1.9 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.1 GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity(GO:0004582)
0.0 0.0 GO:0009824 AMP dimethylallyltransferase activity(GO:0009824)
0.0 0.4 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.0 0.7 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.0 0.1 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.0 0.1 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.1 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.0 0.1 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 0.2 GO:0005221 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) cyclic nucleotide-gated ion channel activity(GO:0043855)
0.0 0.5 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.1 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.0 0.3 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.5 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.1 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 0.3 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.0 0.3 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.0 0.6 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.0 0.6 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.4 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.4 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.3 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 0.5 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.0 0.1 GO:0032131 alkylated DNA binding(GO:0032131)
0.0 1.1 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.2 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.1 GO:0015245 fatty acid transporter activity(GO:0015245)
0.0 0.1 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.0 0.6 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.2 GO:0035198 miRNA binding(GO:0035198)
0.0 0.3 GO:0051119 sugar transmembrane transporter activity(GO:0051119)
0.0 0.2 GO:0009916 alternative oxidase activity(GO:0009916)
0.0 0.1 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.0 0.2 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.2 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.2 GO:0009378 four-way junction helicase activity(GO:0009378)
0.0 0.1 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.0 0.1 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.0 0.3 GO:0015293 symporter activity(GO:0015293)
0.0 0.4 GO:0008375 acetylglucosaminyltransferase activity(GO:0008375)
0.0 0.1 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.1 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.0 0.1 GO:0008481 sphinganine kinase activity(GO:0008481)
0.0 0.6 GO:0044390 ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.0 0.1 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.0 0.1 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.0 1.1 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.3 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 0.1 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.1 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.0 0.0 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.2 GO:0090599 alpha-glucosidase activity(GO:0090599)
0.0 0.2 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.4 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.2 GO:0005504 fatty acid binding(GO:0005504)
0.0 0.1 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.0 0.2 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.0 0.5 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 0.0 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.0 0.2 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.1 GO:0016454 serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454)
0.0 0.1 GO:0003933 GTP cyclohydrolase activity(GO:0003933)
0.0 0.0 GO:0045174 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.0 0.9 GO:0000149 SNARE binding(GO:0000149)
0.0 0.1 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.0 0.4 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.1 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.0 0.0 GO:0016751 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.0 0.3 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 1.3 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 0.0 GO:0010242 oxygen evolving activity(GO:0010242)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.2 0.6 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.2 0.8 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.2 0.7 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.1 0.9 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.1 0.4 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.1 0.2 PID PI3KCI PATHWAY Class I PI3K signaling events
0.1 0.2 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.
0.1 0.1 PID MYC PATHWAY C-MYC pathway
0.0 0.5 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.0 0.3 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.0 0.3 PID ATR PATHWAY ATR signaling pathway
0.0 0.1 PID IL12 2PATHWAY IL12-mediated signaling events
0.0 0.0 PID HES HEY PATHWAY Notch-mediated HES/HEY network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen
0.2 1.2 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.2 0.6 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.2 0.7 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.1 0.7 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.1 1.1 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.1 0.9 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.5 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.1 0.3 REACTOME BIOLOGICAL OXIDATIONS Genes involved in Biological oxidations
0.0 0.5 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.0 0.2 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.0 0.2 REACTOME CDT1 ASSOCIATION WITH THE CDC6 ORC ORIGIN COMPLEX Genes involved in CDT1 association with the CDC6:ORC:origin complex
0.0 0.1 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.0 0.0 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.0 0.1 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.0 0.1 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis