Project

GSE130291:vernalization in Arabidopsis thaliana

Navigation
Downloads

Results for AT5G52830

Z-value: 1.48

Transcription factors associated with AT5G52830

Gene Symbol Gene ID Gene Info
AT5G52830
AT5G52830 WRKY DNA-binding protein 27

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
WRKY27arTal_v1_Chr5_+_21410769_214107690.411.5e-01Click!

Activity profile of AT5G52830 motif

Sorted Z-values of AT5G52830 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr4_-_14827211_14827211 2.56 AT4G30280.1
XTH18
xyloglucan endotransglucosylase/hydrolase 18
arTal_v1_Chr4_+_6826587_6826587 2.11 AT4G11190.1
AT4G11190
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr5_+_19428888_19428888 1.97 AT5G47980.1
AT5G47980
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_+_21603569_21603569 1.97 AT5G53250.1
AGP22
arabinogalactan protein 22
arTal_v1_Chr5_-_19036938_19036938 1.86 AT5G46890.1
AT5G46890
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr1_-_7396773_7396823 1.78 AT1G21120.1
AT1G21120.2
IGMT2
O-methyltransferase family protein
arTal_v1_Chr1_-_4975705_4975705 1.75 AT1G14540.1
PER4
Peroxidase superfamily protein
arTal_v1_Chr5_+_22075277_22075277 1.74 AT5G54370.1
AT5G54370
Late embryogenesis abundant (LEA) protein-like protein
arTal_v1_Chr3_-_17008528_17008528 1.73 AT3G46280.1
AT3G46280
kinase-like protein
arTal_v1_Chr3_+_5187082_5187082 1.70 AT3G15357.1
AT3G15357
phosphopantothenoylcysteine decarboxylase subunit
arTal_v1_Chr5_-_3172701_3172701 1.63 AT5G10130.1
AT5G10130
Pollen Ole e 1 allergen and extensin family protein
arTal_v1_Chr1_+_24292372_24292490 1.58 AT1G65390.1
AT1G65390.3
AT1G65390.2
PP2-A5
phloem protein 2 A5
arTal_v1_Chr3_+_22129505_22129505 1.56 AT3G59900.1
ARGOS
auxin-regulated gene involved in organ size
arTal_v1_Chr1_+_29130375_29130375 1.52 AT1G77520.1
AT1G77520
O-methyltransferase family protein
arTal_v1_Chr3_+_957112_957123 1.50 AT3G03780.1
AT3G03780.3
MS2
methionine synthase 2
arTal_v1_Chr5_-_14566439_14566439 1.46 AT5G36925.1
AT5G36925
hypothetical protein
arTal_v1_Chr3_+_956862_956862 1.46 AT3G03780.2
MS2
methionine synthase 2
arTal_v1_Chr5_+_26894778_26894778 1.45 AT5G67400.1
RHS19
root hair specific 19
arTal_v1_Chr2_-_12277417_12277417 1.43 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr5_-_8508957_8508957 1.39 AT5G24780.2
VSP1
vegetative storage protein 1
arTal_v1_Chr5_-_8154710_8154710 1.38 AT5G24110.1
WRKY30
WRKY DNA-binding protein 30
arTal_v1_Chr2_-_12277245_12277245 1.38 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
arTal_v1_Chr3_+_7105371_7105371 1.37 AT3G20370.2
AT3G20370.1
AT3G20370
TRAF-like family protein
arTal_v1_Chr1_+_19214072_19214072 1.33 AT1G51800.1
IOS1
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_-_8509201_8509201 1.32 AT5G24780.1
VSP1
vegetative storage protein 1
arTal_v1_Chr4_-_12143833_12143858 1.31 AT4G23190.1
AT4G23190.2
AT4G23190.3
CRK11
cysteine-rich RLK (RECEPTOR-like protein kinase) 11
arTal_v1_Chr2_+_8097420_8097420 1.28 AT2G18690.2
AT2G18690.1
AT2G18690
transmembrane protein
arTal_v1_Chr1_+_20462940_20462940 1.25 AT1G54890.1
AT1G54890
Late embryogenesis abundant (LEA) protein-like protein
arTal_v1_Chr3_-_20442650_20442650 1.23 AT3G55150.1
EXO70H1
exocyst subunit exo70 family protein H1
arTal_v1_Chr3_+_3556554_3556554 1.20 AT3G11340.1
UGT76B1
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr4_-_12339967_12339967 1.20 AT4G23690.1
DIR6
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr5_-_22230500_22230500 1.18 AT5G54710.1
AT5G54710
Ankyrin repeat family protein
arTal_v1_Chr2_-_16359943_16359943 1.17 AT2G39200.1
MLO12
Seven transmembrane MLO family protein
arTal_v1_Chr2_-_14295353_14295353 1.15 AT2G33790.1
AGP30
arabinogalactan protein 30
arTal_v1_Chr3_+_9409160_9409160 1.15 AT3G25780.1
AOC3
allene oxide cyclase 3
arTal_v1_Chr1_-_19256783_19256927 1.15 AT1G51850.1
AT1G51850.2
AT1G51850
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_+_16431304_16431391 1.14 AT5G41040.1
AT5G41040.2
RWP1
HXXXD-type acyl-transferase family protein
arTal_v1_Chr5_-_23855275_23855275 1.13 AT5G59090.2
AT5G59090.3
SBT4.12
subtilase 4.12
arTal_v1_Chr3_+_604785_604785 1.13 AT3G02790.1
AT3G02790
zinc finger (C2H2 type) family protein
arTal_v1_Chr5_-_22230663_22230663 1.12 AT5G54710.2
AT5G54710
Ankyrin repeat family protein
arTal_v1_Chr1_+_5596633_5596633 1.12 AT1G16370.1
OCT6
organic cation/carnitine transporter 6
arTal_v1_Chr1_+_4864881_4865006 1.11 AT1G14240.2
AT1G14240.4
AT1G14240.1
AT1G14240.3
AT1G14240
GDA1/CD39 nucleoside phosphatase family protein
arTal_v1_Chr4_+_8688250_8688289 1.10 AT4G15233.1
AT4G15233.7
AT4G15233.8
AT4G15233.2
ABCG42
ABC-2 and Plant PDR ABC-type transporter family protein
arTal_v1_Chr1_+_6697874_6697874 1.10 AT1G19380.1
AT1G19380
sugar, putative (DUF1195)
arTal_v1_Chr5_-_18371021_18371021 1.10 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
arTal_v1_Chr4_-_12143476_12143476 1.08 AT4G23190.4
CRK11
cysteine-rich RLK (RECEPTOR-like protein kinase) 11
arTal_v1_Chr5_-_19629167_19629167 1.07 AT5G48430.1
AT5G48430
Eukaryotic aspartyl protease family protein
arTal_v1_Chr4_+_18519599_18519599 1.07 AT4G39940.1
AKN2
APS-kinase 2
arTal_v1_Chr1_+_24357749_24357749 1.06 AT1G65500.1
AT1G65500
transmembrane protein
arTal_v1_Chr5_+_16852628_16852628 1.06 AT5G42180.1
PER64
Peroxidase superfamily protein
arTal_v1_Chr3_+_7770899_7770899 1.06 AT3G22060.1
AT3G22060
Receptor-like protein kinase-related family protein
arTal_v1_Chr1_-_473160_473336 1.05 AT1G02360.1
AT1G02360.2
AT1G02360.3
AT1G02360
Chitinase family protein
arTal_v1_Chr2_-_17441416_17441416 1.04 AT2G41810.1
AT2G41810
imidazolonepropionase (Protein of unknown function, DUF642)
arTal_v1_Chr2_-_14432482_14432482 1.04 AT2G34180.1
CIPK13
CBL-interacting protein kinase 13
arTal_v1_Chr1_-_20019835_20019835 1.03 AT1G53635.1
AT1G53635
hypothetical protein
arTal_v1_Chr4_-_524249_524249 1.03 AT4G01250.1
WRKY22
WRKY family transcription factor
arTal_v1_Chr1_-_9128568_9128568 1.02 AT1G26380.1
AT1G26380
FAD-binding Berberine family protein
arTal_v1_Chr1_-_2199773_2199773 1.02 AT1G07160.1
AT1G07160
Protein phosphatase 2C family protein
arTal_v1_Chr4_+_17752079_17752079 1.02 AT4G37770.1
ACS8
1-amino-cyclopropane-1-carboxylate synthase 8
arTal_v1_Chr5_+_4904873_4904873 1.02 AT5G15130.2
WRKY72
WRKY DNA-binding protein 72
arTal_v1_Chr5_+_4904290_4904290 1.01 AT5G15130.1
WRKY72
WRKY DNA-binding protein 72
arTal_v1_Chr2_+_15706285_15706285 0.99 AT2G37430.1
ZAT11
C2H2 and C2HC zinc fingers superfamily protein
arTal_v1_Chr5_+_25064793_25064793 0.98 AT5G62420.1
AT5G62420
NAD(P)-linked oxidoreductase superfamily protein
arTal_v1_Chr2_-_16237280_16237280 0.98 AT2G38870.1
AT2G38870
Serine protease inhibitor, potato inhibitor I-type family protein
arTal_v1_Chr2_-_16499524_16499524 0.98 AT2G39530.1
AT2G39530
Uncharacterized protein family (UPF0497)
arTal_v1_Chr5_-_17185032_17185032 0.97 AT5G42860.1
AT5G42860
late embryogenesis abundant protein, group 2
arTal_v1_Chr1_+_12188678_12188678 0.96 AT1G33610.1
AT1G33610
Leucine-rich repeat (LRR) family protein
arTal_v1_Chr1_-_20707071_20707071 0.94 AT1G55450.1
AT1G55450
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_-_20706893_20706893 0.93 AT1G55450.2
AT1G55450
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr4_-_17606924_17607050 0.93 AT4G37450.1
AT4G37450.2
AGP18
arabinogalactan protein 18
arTal_v1_Chr5_-_9333284_9333284 0.92 AT5G26660.2
AT5G26660.1
MYB86
myb domain protein 86
arTal_v1_Chr2_+_10456879_10456879 0.92 AT2G24610.1
AT2G24610.2
CNGC14
cyclic nucleotide-gated channel 14
arTal_v1_Chr5_-_23855499_23855499 0.91 AT5G59090.1
SBT4.12
subtilase 4.12
arTal_v1_Chr1_-_19385533_19385602 0.90 AT1G52100.1
AT1G52100.3
AT1G52100.4
AT1G52100.2
AT1G52100.5
AT1G52100
Mannose-binding lectin superfamily protein
arTal_v1_Chr4_+_12291632_12291632 0.90 AT4G23550.1
WRKY29
WRKY family transcription factor
arTal_v1_Chr3_+_5571903_5571903 0.90 AT3G16410.1
NSP4
nitrile specifier protein 4
arTal_v1_Chr3_+_18487130_18487130 0.89 AT3G49845.1
WIH3
cysteine-rich TM module stress tolerance protein
arTal_v1_Chr1_-_10720843_10720843 0.89 AT1G30370.1
DLAH
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr2_+_15379660_15379660 0.89 AT2G36690.1
AT2G36690
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr2_+_723565_723565 0.88 AT2G02630.1
AT2G02630
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr3_+_7518784_7518784 0.88 AT3G21351.1
AT3G21351
transmembrane protein
arTal_v1_Chr5_+_18137349_18137349 0.88 AT5G44910.1
AT5G44910
Toll-Interleukin-Resistance (TIR) domain family protein
arTal_v1_Chr1_-_25065446_25065446 0.87 AT1G67110.1
AT1G67110.2
CYP735A2
cytochrome P450, family 735, subfamily A, polypeptide 2
arTal_v1_Chr1_+_30383561_30383561 0.87 AT1G80840.1
WRKY40
WRKY DNA-binding protein 40
arTal_v1_Chr1_+_6389399_6389399 0.86 AT1G18570.1
MYB51
myb domain protein 51
arTal_v1_Chr4_+_13283526_13283526 0.86 AT4G26220.1
AT4G26220
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr5_+_17734706_17734708 0.86 AT5G44070.1
AT5G44070.2
CAD1
phytochelatin synthase 1 (PCS1)
arTal_v1_Chr2_+_15379846_15379846 0.86 AT2G36690.2
AT2G36690
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr4_-_8753157_8753297 0.86 AT4G15330.2
AT4G15330.1
CYP705A1
cytochrome P450, family 705, subfamily A, polypeptide 1
arTal_v1_Chr4_+_6967709_6967729 0.85 AT4G11470.2
AT4G11470.1
CRK31
cysteine-rich RLK (RECEPTOR-like protein kinase) 31
arTal_v1_Chr1_+_18209194_18209194 0.85 AT1G49230.1
AT1G49230
RING/U-box superfamily protein
arTal_v1_Chr3_-_4799612_4799612 0.85 AT3G14370.1
WAG2
Protein kinase superfamily protein
arTal_v1_Chr5_-_26920179_26920179 0.84 AT5G67450.1
ZF1
zinc-finger protein 1
arTal_v1_Chr1_+_6832325_6832325 0.84 AT1G19770.1
PUP14
purine permease 14
arTal_v1_Chr4_+_18185437_18185437 0.84 AT4G39030.1
EDS5
MATE efflux family protein
arTal_v1_Chr5_-_17025361_17025361 0.84 AT5G42580.1
CYP705A12
cytochrome P450, family 705, subfamily A, polypeptide 12
arTal_v1_Chr3_-_19066560_19066734 0.84 AT3G51360.1
AT3G51360.4
AT3G51360.10
AT3G51360.3
AT3G51360.2
AT3G51360.6
AT3G51360.9
AT3G51360.7
AT3G51360.8
AT3G51360.5
AT3G51360
Eukaryotic aspartyl protease family protein
arTal_v1_Chr2_+_16750035_16750035 0.84 AT2G40113.1
AT2G40113
Pollen Ole e 1 allergen and extensin family protein
arTal_v1_Chr5_-_2362228_2362228 0.83 AT5G07460.1
PMSR2
peptidemethionine sulfoxide reductase 2
arTal_v1_Chr1_+_24349399_24349632 0.83 AT1G65486.3
AT1G65486.4
AT1G65486.1
AT1G65486.2
AT1G65486
transmembrane protein
arTal_v1_Chr1_+_17065858_17065858 0.83 AT1G45130.2
BGAL5
beta-galactosidase 5
arTal_v1_Chr1_-_18124289_18124289 0.83 AT1G49000.1
AT1G49000
transmembrane protein
arTal_v1_Chr5_+_6467527_6467527 0.83 AT5G19230.1
AT5G19230
Glycoprotein membrane precursor GPI-anchored
arTal_v1_Chr2_-_9741463_9741463 0.83 AT2G22880.1
AT2G22880
VQ motif-containing protein
arTal_v1_Chr4_+_8687354_8687380 0.82 AT4G15233.3
AT4G15233.4
ABCG42
ABC-2 and Plant PDR ABC-type transporter family protein
arTal_v1_Chr5_+_6467193_6467193 0.82 AT5G19230.2
AT5G19230
Glycoprotein membrane precursor GPI-anchored
arTal_v1_Chr2_-_11800928_11800928 0.81 AT2G27660.1
AT2G27660
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr1_+_17065111_17065111 0.81 AT1G45130.1
BGAL5
beta-galactosidase 5
arTal_v1_Chr5_-_16252434_16252434 0.81 AT5G40590.1
AT5G40590
Cysteine/Histidine-rich C1 domain family protein
arTal_v1_Chr5_-_20468128_20468217 0.81 AT5G50300.1
AT5G50300.2
AZG2
Xanthine/uracil permease family protein
arTal_v1_Chr5_-_4620551_4620551 0.80 AT5G14330.1
AT5G14330
transmembrane protein
arTal_v1_Chr4_-_17571743_17571743 0.80 AT4G37370.1
CYP81D8
cytochrome P450, family 81, subfamily D, polypeptide 8
arTal_v1_Chr3_+_18487411_18487411 0.80 AT3G49845.2
WIH3
cysteine-rich TM module stress tolerance protein
arTal_v1_Chr3_-_21215428_21215428 0.80 AT3G57330.2
ACA11
autoinhibited Ca2+-ATPase 11
arTal_v1_Chr3_-_9338075_9338075 0.79 AT3G25655.1
IDL1
inflorescence deficient in abscission (IDA)-like 1
arTal_v1_Chr1_-_7455009_7455009 0.79 AT1G21310.1
EXT3
extensin 3
arTal_v1_Chr2_-_17002528_17002528 0.78 AT2G40750.1
WRKY54
WRKY DNA-binding protein 54
arTal_v1_Chr2_-_8329944_8329944 0.78 AT2G19190.1
FRK1
FLG22-induced receptor-like kinase 1
arTal_v1_Chr2_-_16368570_16368570 0.77 AT2G39210.1
AT2G39210
Major facilitator superfamily protein
arTal_v1_Chr4_+_12137995_12138137 0.76 AT4G23180.1
AT4G23180.3
AT4G23180.2
CRK10
cysteine-rich RLK (RECEPTOR-like protein kinase) 10
arTal_v1_Chr5_-_19132283_19132304 0.76 AT5G47100.2
AT5G47100.1
CBL9
calcineurin B-like protein 9
arTal_v1_Chr1_+_15081952_15081952 0.76 AT1G40104.1
AT1G40104
hypothetical protein
arTal_v1_Chr3_-_17910736_17910738 0.76 AT3G48360.3
AT3G48360.1
AT3G48360.2
BT2
BTB and TAZ domain protein 2
arTal_v1_Chr2_+_8256921_8256921 0.75 AT2G19060.1
AT2G19060
SGNH hydrolase-type esterase superfamily protein
arTal_v1_Chr5_+_26573964_26573964 0.75 AT5G66590.1
AT5G66590
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
arTal_v1_Chr2_-_10122479_10122479 0.75 AT2G23770.1
LYK4
protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
arTal_v1_Chr1_-_21063047_21063047 0.75 AT1G56250.1
PP2-B14
phloem protein 2-B14
arTal_v1_Chr3_-_20052817_20052931 0.75 AT3G54150.2
AT3G54150.1
AT3G54150
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr1_-_4624081_4624081 0.74 AT1G13480.1
AT1G13480
hypothetical protein (DUF1262)
arTal_v1_Chr3_-_20366840_20366874 0.73 AT3G54960.2
AT3G54960.1
PDIL1-3
PDI-like 1-3
arTal_v1_Chr5_+_17451488_17451488 0.73 AT5G43420.1
AT5G43420
RING/U-box superfamily protein
arTal_v1_Chr1_-_19211971_19211971 0.73 AT1G51790.1
AT1G51790.3
AT1G51790
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_+_15616770_15616770 0.73 AT5G39020.1
AT5G39020
Malectin/receptor-like protein kinase family protein
arTal_v1_Chr2_-_16497145_16497145 0.73 AT2G39518.1
AT2G39518
Uncharacterized protein family (UPF0497)
arTal_v1_Chr1_+_10897925_10897925 0.73 AT1G30720.1
AT1G30720
FAD-binding Berberine family protein
arTal_v1_Chr1_-_24493923_24493923 0.73 AT1G65845.1
AT1G65845
transmembrane protein
arTal_v1_Chr3_+_5579290_5579475 0.72 AT3G16420.1
AT3G16420.3
AT3G16420.2
PBP1
PYK10-binding protein 1
arTal_v1_Chr5_-_1467161_1467161 0.72 AT5G04970.1
AT5G04970
Plant invertase/pectin methylesterase inhibitor superfamily
arTal_v1_Chr2_-_19352088_19352088 0.72 AT2G47140.1
SDR5
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr3_-_21216836_21216836 0.72 AT3G57330.1
ACA11
autoinhibited Ca2+-ATPase 11
arTal_v1_Chr2_+_18364652_18364652 0.72 AT2G44490.1
PEN2
Glycosyl hydrolase superfamily protein
arTal_v1_Chr3_+_18465318_18465318 0.71 AT3G49780.1
PSK4
phytosulfokine 4 precursor
arTal_v1_Chr3_+_18728935_18728935 0.71 AT3G50470.1
HR3
homolog of RPW8 3
arTal_v1_Chr3_+_229075_229075 0.71 AT3G01600.1
NAC044
NAC domain containing protein 44
arTal_v1_Chr2_-_6710856_6710856 0.70 AT2G15390.1
FUT4
fucosyltransferase 4
arTal_v1_Chr5_-_8856758_8856809 0.70 AT5G25440.1
AT5G25440.2
AT5G25440
Protein kinase superfamily protein
arTal_v1_Chr3_-_20806333_20806333 0.69 AT3G56060.1
AT3G56060
Glucose-methanol-choline (GMC) oxidoreductase family protein
arTal_v1_Chr1_+_5525293_5525293 0.69 AT1G16130.1
WAKL2
wall associated kinase-like 2
arTal_v1_Chr5_+_25939562_25939562 0.69 AT5G64905.1
PROPEP3
elicitor peptide 3 precursor
arTal_v1_Chr4_-_12120214_12120220 0.69 AT4G23130.2
AT4G23130.1
AT4G23130.3
CRK5
cysteine-rich RLK (RECEPTOR-like protein kinase) 5
arTal_v1_Chr5_+_2355962_2355962 0.68 AT5G07440.3
GDH2
glutamate dehydrogenase 2
arTal_v1_Chr5_+_2355759_2355759 0.68 AT5G07440.2
AT5G07440.1
GDH2
glutamate dehydrogenase 2
arTal_v1_Chr3_-_202754_202754 0.68 AT3G01513.1
AT3G01513
hypothetical protein
arTal_v1_Chr3_-_7383980_7384163 0.67 AT3G21070.1
AT3G21070.2
AT3G21070.4
AT3G21070.3
NADK1
NAD kinase 1
arTal_v1_Chr2_-_5776289_5776342 0.67 AT2G13820.2
AT2G13820.1
AT2G13820.3
XYP2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr5_-_23287739_23287739 0.67 AT5G57500.1
AT5G57500
Galactosyltransferase family protein
arTal_v1_Chr4_-_14692553_14692553 0.66 AT4G30060.1
AT4G30060
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
arTal_v1_Chr2_+_13554870_13554870 0.66 AT2G31880.1
SOBIR1
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr3_+_20780175_20780175 0.66 AT3G55990.1
ESK1
trichome birefringence-like protein (DUF828)
arTal_v1_Chr2_-_6711156_6711156 0.66 AT2G15390.2
FUT4
fucosyltransferase 4
arTal_v1_Chr1_-_26327965_26327965 0.65 AT1G69900.1
AT1G69900
Actin cross-linking protein
arTal_v1_Chr5_+_24046512_24046512 0.65 AT5G59680.1
AT5G59680
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr3_+_5592644_5592644 0.65 AT3G16460.2
JAL34
Mannose-binding lectin superfamily protein
arTal_v1_Chr3_+_5592491_5592491 0.65 AT3G16460.1
JAL34
Mannose-binding lectin superfamily protein
arTal_v1_Chr5_-_25460436_25460436 0.65 AT5G63595.1
FLS4
flavonol synthase 4
arTal_v1_Chr1_-_26415258_26415258 0.65 AT1G70140.1
FH8
formin 8
arTal_v1_Chr4_-_12883701_12883805 0.65 AT4G25090.2
AT4G25090.1
AT4G25090
Riboflavin synthase-like superfamily protein
arTal_v1_Chr1_+_27134108_27134108 0.64 AT1G72125.1
AT1G72125
Major facilitator superfamily protein
arTal_v1_Chr1_-_59215_59215 0.64 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
arTal_v1_Chr5_-_22358381_22358413 0.63 AT5G55090.1
AT5G55090.2
MAPKKK15
mitogen-activated protein kinase kinase kinase 15
arTal_v1_Chr4_-_14691723_14691723 0.63 AT4G30060.2
AT4G30060
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
arTal_v1_Chr4_-_13460105_13460105 0.63 AT4G26690.1
SHV3
PLC-like phosphodiesterase family protein
arTal_v1_Chr5_+_23420184_23420184 0.63 AT5G57800.1
CER3
Fatty acid hydroxylase superfamily
arTal_v1_Chr1_+_8333472_8333472 0.63 AT1G23480.4
AT1G23480.2
CSLA03
cellulose synthase-like A3
arTal_v1_Chr4_-_1539987_1539987 0.62 AT4G03460.2
AT4G03460
Ankyrin repeat family protein
arTal_v1_Chr4_-_17672353_17672353 0.62 AT4G37610.1
BT5
BTB and TAZ domain protein 5
arTal_v1_Chr5_+_17415698_17415772 0.62 AT5G43370.1
AT5G43370.2
PHT1%3B2
phosphate transporter 2
arTal_v1_Chr3_-_4775258_4775258 0.62 AT3G14310.1
PME3
pectin methylesterase 3
arTal_v1_Chr3_+_2288732_2288838 0.61 AT3G07195.1
AT3G07195.2
AT3G07195
RPM1-interacting protein 4 (RIN4) family protein
arTal_v1_Chr1_-_19210915_19210915 0.61 AT1G51790.2
AT1G51790
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_-_25843555_25843555 0.61 AT5G64660.1
CMPG2
CYS, MET, PRO, and GLY protein 2
arTal_v1_Chr1_+_17021684_17021684 0.60 AT1G45015.2
AT1G45015
MD-2-related lipid recognition domain-containing protein
arTal_v1_Chr2_+_18314188_18314188 0.60 AT2G44340.1
AT2G44340
VQ motif-containing protein
arTal_v1_Chr1_+_27308513_27308513 0.60 AT1G72520.1
LOX4
PLAT/LH2 domain-containing lipoxygenase family protein
arTal_v1_Chr4_+_8687981_8687981 0.60 AT4G15233.6
ABCG42
ABC-2 and Plant PDR ABC-type transporter family protein
arTal_v1_Chr1_+_20151016_20151016 0.60 AT1G53990.1
GLIP3
GDSL-motif lipase 3
arTal_v1_Chr1_+_17021514_17021514 0.59 AT1G45015.1
AT1G45015
MD-2-related lipid recognition domain-containing protein
arTal_v1_Chr4_+_8687820_8687820 0.59 AT4G15233.5
ABCG42
ABC-2 and Plant PDR ABC-type transporter family protein
arTal_v1_Chr4_+_12539656_12539684 0.59 AT4G24160.1
AT4G24160.2
AT4G24160
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_+_10838310_10838310 0.59 AT4G20000.1
AT4G20000
VQ motif-containing protein
arTal_v1_Chr1_-_1821894_1821894 0.59 AT1G06000.1
AT1G06000
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr1_-_659980_659980 0.58 AT1G02920.1
GSTF7
glutathione S-transferase 7
arTal_v1_Chr5_+_13434151_13434181 0.58 AT5G35190.2
AT5G35190.1
EXT13
proline-rich extensin-like family protein
arTal_v1_Chr1_-_1662259_1662259 0.58 AT1G05575.1
AT1G05575
transmembrane protein
arTal_v1_Chr1_-_2711000_2711000 0.58 AT1G08560.1
SYP111
syntaxin of plants 111
arTal_v1_Chr3_-_20785885_20785885 0.58 AT3G56000.1
CSLA14
cellulose synthase like A14
arTal_v1_Chr3_-_8275565_8275565 0.58 AT3G23175.1
AT3G23175
HR-like lesion-inducing protein-like protein
arTal_v1_Chr1_+_27506485_27506485 0.58 AT1G73160.1
AT1G73160
UDP-Glycosyltransferase superfamily protein
arTal_v1_Chr5_-_1931782_1931782 0.57 AT5G06320.1
NHL3
NDR1/HIN1-like 3
arTal_v1_Chr1_+_2630891_2630891 0.57 AT1G08340.1
AT1G08340
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G52830

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 3.0 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.5 1.4 GO:0010045 response to nickel cation(GO:0010045)
0.4 1.3 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.4 1.6 GO:0019427 acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.4 1.6 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.3 1.6 GO:0046622 positive regulation of organ growth(GO:0046622)
0.3 0.8 GO:0010184 cytokinin transport(GO:0010184)
0.3 1.3 GO:0071323 cellular response to chitin(GO:0071323)
0.3 0.8 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.2 1.0 GO:0050992 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.2 1.2 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.2 4.7 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.2 0.8 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.2 0.6 GO:0055089 fatty acid homeostasis(GO:0055089)
0.2 1.1 GO:0016107 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.2 0.9 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.2 0.5 GO:0010198 synergid death(GO:0010198)
0.2 0.7 GO:0006741 NADP biosynthetic process(GO:0006741)
0.2 0.7 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.1 0.5 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.1 0.5 GO:0035964 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.1 0.4 GO:0045905 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.1 0.4 GO:0006420 arginyl-tRNA aminoacylation(GO:0006420)
0.1 0.5 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.1 1.3 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.1 0.4 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 0.7 GO:0009745 sucrose mediated signaling(GO:0009745)
0.1 0.4 GO:0006971 hypotonic response(GO:0006971) positive regulation of seed maturation(GO:2000693)
0.1 0.4 GO:0032963 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 1.9 GO:0006538 glutamate catabolic process(GO:0006538)
0.1 0.9 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.1 0.6 GO:0015824 proline transport(GO:0015824)
0.1 0.8 GO:0006000 fructose metabolic process(GO:0006000)
0.1 0.4 GO:0006023 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.1 1.8 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.1 0.6 GO:0043447 alkane biosynthetic process(GO:0043447)
0.1 0.4 GO:0015675 nickel cation transport(GO:0015675)
0.1 0.8 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 0.6 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.1 1.8 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.1 0.4 GO:0035264 multicellular organism growth(GO:0035264)
0.1 1.5 GO:0052325 cell wall pectin biosynthetic process(GO:0052325)
0.1 0.8 GO:2000068 regulation of defense response to insect(GO:2000068)
0.1 0.3 GO:0010447 response to acidic pH(GO:0010447)
0.1 0.6 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.1 0.5 GO:0071398 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.1 1.0 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 0.9 GO:0050691 regulation of defense response to virus by host(GO:0050691)
0.1 1.0 GO:0009554 megasporogenesis(GO:0009554)
0.1 0.4 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.1 2.1 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.1 0.6 GO:0006597 spermine biosynthetic process(GO:0006597)
0.1 0.4 GO:0090030 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.1 0.9 GO:1900457 regulation of brassinosteroid mediated signaling pathway(GO:1900457)
0.1 0.5 GO:0046133 pyrimidine ribonucleoside catabolic process(GO:0046133) pyrimidine nucleoside catabolic process(GO:0046135)
0.1 1.4 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.1 0.6 GO:0009061 anaerobic respiration(GO:0009061)
0.1 0.4 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.1 1.0 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.1 2.0 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.1 8.4 GO:0010200 response to chitin(GO:0010200)
0.1 0.5 GO:0009080 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.1 0.3 GO:0045793 positive regulation of cell size(GO:0045793)
0.1 0.8 GO:0080144 amino acid homeostasis(GO:0080144)
0.1 3.0 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.1 0.3 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.1 0.1 GO:0010483 pollen tube reception(GO:0010483) intraspecies interaction between organisms(GO:0051703)
0.1 0.9 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.1 0.9 GO:0015918 sterol transport(GO:0015918)
0.1 2.3 GO:0002239 response to oomycetes(GO:0002239)
0.1 1.7 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.1 0.8 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.1 0.5 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 0.2 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.1 0.2 GO:0006517 protein deglycosylation(GO:0006517)
0.1 2.2 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 0.2 GO:0071217 response to silver ion(GO:0010272) response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217) response to ketone(GO:1901654)
0.1 0.3 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.4 GO:0009452 7-methylguanosine RNA capping(GO:0009452) RNA capping(GO:0036260)
0.0 0.2 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.3 GO:0090202 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.0 0.4 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.0 0.1 GO:0015840 urea transport(GO:0015840)
0.0 1.1 GO:0010193 response to ozone(GO:0010193)
0.0 0.2 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.0 0.2 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.0 0.2 GO:0071493 cellular response to UV-B(GO:0071493)
0.0 0.2 GO:0018871 1-aminocyclopropane-1-carboxylate metabolic process(GO:0018871) 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 0.5 GO:0010167 response to nitrate(GO:0010167)
0.0 0.6 GO:0030497 fatty acid elongation(GO:0030497)
0.0 0.8 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.0 0.6 GO:0010440 stomatal lineage progression(GO:0010440)
0.0 1.1 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 0.5 GO:0018401 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.6 GO:0051555 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.0 0.4 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.0 0.5 GO:0046688 response to copper ion(GO:0046688)
0.0 0.4 GO:0032409 regulation of transporter activity(GO:0032409)
0.0 0.6 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.3 GO:0070129 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.0 0.5 GO:0010274 hydrotropism(GO:0010274)
0.0 0.3 GO:0045995 regulation of embryonic development(GO:0045995)
0.0 0.1 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.6 GO:0019374 galactolipid metabolic process(GO:0019374)
0.0 0.6 GO:0010048 vernalization response(GO:0010048)
0.0 0.1 GO:0001738 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.0 1.0 GO:0010214 seed coat development(GO:0010214)
0.0 0.3 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.0 0.1 GO:1901002 positive regulation of response to salt stress(GO:1901002)
0.0 3.6 GO:0080167 response to karrikin(GO:0080167)
0.0 0.3 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.1 GO:0019483 uracil catabolic process(GO:0006212) beta-alanine metabolic process(GO:0019482) beta-alanine biosynthetic process(GO:0019483)
0.0 0.3 GO:0015908 fatty acid transport(GO:0015908)
0.0 1.0 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.5 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 3.0 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 0.3 GO:0010052 guard cell differentiation(GO:0010052)
0.0 0.7 GO:0050826 response to freezing(GO:0050826)
0.0 0.1 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.0 0.3 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.0 4.6 GO:0009753 response to jasmonic acid(GO:0009753)
0.0 1.0 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.4 GO:0051262 protein tetramerization(GO:0051262)
0.0 0.1 GO:0010432 bract development(GO:0010432)
0.0 0.5 GO:0015743 malate transport(GO:0015743)
0.0 0.5 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.7 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 1.7 GO:0019932 second-messenger-mediated signaling(GO:0019932)
0.0 0.2 GO:1904666 regulation of ubiquitin protein ligase activity(GO:1904666) positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0 0.1 GO:0061014 positive regulation of mRNA catabolic process(GO:0061014)
0.0 0.5 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.1 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.0 0.2 GO:0098657 import into cell(GO:0098657)
0.0 0.3 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.2 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.6 GO:0045010 positive regulation of actin filament polymerization(GO:0030838) actin nucleation(GO:0045010)
0.0 0.1 GO:0003400 regulation of COPII vesicle coating(GO:0003400) regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis(GO:0090113)
0.0 0.3 GO:0071545 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.0 0.3 GO:0000105 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.3 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.6 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.0 0.1 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.0 0.1 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.0 0.2 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.1 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.0 0.3 GO:0047484 regulation of response to osmotic stress(GO:0047484)
0.0 0.4 GO:0010584 pollen exine formation(GO:0010584)
0.0 0.0 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.0 0.1 GO:0019419 sulfate reduction(GO:0019419)
0.0 0.1 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.0 0.4 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 1.1 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 0.7 GO:0048825 cotyledon development(GO:0048825)
0.0 0.4 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.2 GO:0031145 anaphase-promoting complex-dependent catabolic process(GO:0031145)
0.0 0.1 GO:1901404 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.0 0.1 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.0 0.5 GO:0009626 plant-type hypersensitive response(GO:0009626) host programmed cell death induced by symbiont(GO:0034050)
0.0 0.1 GO:0042723 thiamine metabolic process(GO:0006772) thiamine diphosphate biosynthetic process(GO:0009229) thiamine diphosphate metabolic process(GO:0042357) thiamine-containing compound metabolic process(GO:0042723)
0.0 2.3 GO:0071456 cellular response to hypoxia(GO:0071456)
0.0 0.1 GO:0045003 double-strand break repair via synthesis-dependent strand annealing(GO:0045003)
0.0 0.2 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.0 0.2 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.5 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 1.0 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.3 GO:0046246 terpene biosynthetic process(GO:0046246)
0.0 0.2 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.0 0.1 GO:0072659 protein localization to plasma membrane(GO:0072659)
0.0 0.1 GO:0051955 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) amino acid export(GO:0032973) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.0 0.6 GO:0006887 exocytosis(GO:0006887)
0.0 0.2 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.0 0.7 GO:0009751 response to salicylic acid(GO:0009751)
0.0 0.2 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.0 0.4 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.9 GO:0080147 root hair cell development(GO:0080147)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.1 GO:0042555 MCM complex(GO:0042555)
0.1 0.7 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.1 0.8 GO:0048226 Casparian strip(GO:0048226)
0.1 0.3 GO:0009346 citrate lyase complex(GO:0009346)
0.1 0.1 GO:0044426 cell wall part(GO:0044426) external encapsulating structure part(GO:0044462)
0.1 0.6 GO:0035618 root hair(GO:0035618)
0.1 1.4 GO:0031012 extracellular matrix(GO:0031012)
0.1 1.8 GO:0000145 exocyst(GO:0000145)
0.0 0.3 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 2.4 GO:0090406 pollen tube(GO:0090406)
0.0 4.2 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 4.2 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.3 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.2 GO:0071256 translocon complex(GO:0071256)
0.0 0.1 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.0 4.2 GO:0009505 plant-type cell wall(GO:0009505)
0.0 2.6 GO:0031225 anchored component of membrane(GO:0031225)
0.0 1.2 GO:0099503 secretory vesicle(GO:0099503)
0.0 1.9 GO:0005615 extracellular space(GO:0005615)
0.0 5.5 GO:0048046 apoplast(GO:0048046)
0.0 5.1 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.3 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 0.2 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.0 0.1 GO:0034515 proteasome storage granule(GO:0034515)
0.0 0.1 GO:0034657 GID complex(GO:0034657)
0.0 26.2 GO:0005576 extracellular region(GO:0005576)
0.0 0.1 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 0.1 GO:0000407 pre-autophagosomal structure(GO:0000407)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 3.0 GO:0042084 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.5 1.4 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
0.4 1.2 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.3 1.0 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.3 2.6 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.3 1.1 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.3 1.4 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.3 0.8 GO:0043140 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.2 2.8 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.2 1.1 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.2 1.1 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.2 0.6 GO:0009924 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.2 0.7 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.2 0.9 GO:0046870 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225) cadmium ion binding(GO:0046870)
0.2 0.5 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.2 0.5 GO:0050263 uridine nucleosidase activity(GO:0045437) ribosylpyrimidine nucleosidase activity(GO:0050263)
0.2 0.8 GO:0036456 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.2 3.7 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 0.4 GO:0004814 arginine-tRNA ligase activity(GO:0004814)
0.1 1.4 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.1 0.4 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
0.1 1.1 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 0.4 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.1 0.4 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.1 1.8 GO:0004568 chitinase activity(GO:0004568)
0.1 1.4 GO:0008061 chitin binding(GO:0008061)
0.1 0.7 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.1 0.3 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.1 0.6 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.1 0.6 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 0.5 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.1 0.6 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.1 0.7 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.1 0.6 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 0.5 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 0.6 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.1 2.2 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.1 1.2 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.1 0.4 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 3.8 GO:0008171 O-methyltransferase activity(GO:0008171)
0.1 2.2 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.1 0.4 GO:0016768 spermine synthase activity(GO:0016768)
0.1 0.1 GO:0016229 steroid dehydrogenase activity(GO:0016229)
0.1 1.0 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.1 0.7 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 0.3 GO:0043916 DNA-7-methylguanine glycosylase activity(GO:0043916)
0.1 0.4 GO:0000048 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.1 0.9 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 0.4 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.1 2.5 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.1 0.5 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.6 GO:0004096 catalase activity(GO:0004096)
0.1 1.3 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.1 0.3 GO:0016420 malonyltransferase activity(GO:0016420)
0.1 1.0 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.1 0.7 GO:0008970 phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.1 0.4 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.6 GO:0008865 fructokinase activity(GO:0008865)
0.1 0.5 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 1.4 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 0.8 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.1 2.4 GO:0003993 acid phosphatase activity(GO:0003993)
0.1 0.2 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 1.0 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.1 0.5 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 0.2 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.1 0.2 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.1 0.3 GO:0004441 inositol-1,4-bisphosphate 1-phosphatase activity(GO:0004441)
0.1 0.3 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.4 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.0 0.5 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 1.6 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.3 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.1 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.0 4.4 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.2 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.0 0.8 GO:0016157 sucrose synthase activity(GO:0016157)
0.0 0.6 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.3 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.0 0.5 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.6 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.5 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.0 0.1 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.0 0.2 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.2 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 0.2 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.0 0.1 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.0 0.3 GO:0097177 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.0 0.5 GO:0031545 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0 0.1 GO:0030975 thiamine diphosphokinase activity(GO:0004788) thiamine binding(GO:0030975)
0.0 1.0 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.3 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.0 0.8 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.6 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 1.6 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.2 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.0 0.1 GO:0010331 gibberellin binding(GO:0010331)
0.0 0.7 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.3 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.0 0.1 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.5 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.1 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.0 0.3 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 5.2 GO:0005516 calmodulin binding(GO:0005516)
0.0 0.3 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.0 0.1 GO:0008686 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.0 0.2 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 0.8 GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen(GO:0016701)
0.0 0.2 GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters(GO:0016888)
0.0 0.2 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.0 0.3 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.8 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 0.2 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 1.4 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.1 GO:0009973 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.0 0.1 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.0 0.1 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.0 0.3 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.2 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.1 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.0 0.1 GO:0047714 galactolipase activity(GO:0047714)
0.0 1.8 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.1 GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity(GO:0004021) alanine-oxo-acid transaminase activity(GO:0047635)
0.0 0.3 GO:0005249 voltage-gated potassium channel activity(GO:0005249)
0.0 0.3 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 5.7 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 0.1 GO:0004470 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471)
0.0 0.1 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.3 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.3 GO:0008066 intracellular ligand-gated ion channel activity(GO:0005217) glutamate receptor activity(GO:0008066)
0.0 0.2 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.5 GO:0015079 potassium ion transmembrane transporter activity(GO:0015079)
0.0 0.1 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 0.2 GO:0008308 voltage-gated anion channel activity(GO:0008308)
0.0 0.2 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.0 0.1 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.0 0.8 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 0.2 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.1 GO:0044620 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process(GO:0000036) ACP phosphopantetheine attachment site binding(GO:0044620) prosthetic group binding(GO:0051192)
0.0 0.0 GO:0035241 protein-arginine omega-N monomethyltransferase activity(GO:0035241)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 NABA SECRETED FACTORS Genes encoding secreted soluble factors
0.1 0.4 PID P73PATHWAY p73 transcription factor network
0.0 0.3 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.0 0.1 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.0 0.2 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.0 0.1 PID ATM PATHWAY ATM pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 REACTOME PROLACTIN RECEPTOR SIGNALING Genes involved in Prolactin receptor signaling
0.1 0.6 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.1 0.4 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.1 0.3 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.1 0.4 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.1 0.4 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.1 0.5 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.2 REACTOME PKB MEDIATED EVENTS Genes involved in PKB-mediated events
0.0 0.3 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.0 0.3 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.1 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.0 0.1 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors