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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT5G61850

Z-value: 2.53

Transcription factors associated with AT5G61850

Gene Symbol Gene ID Gene Info
AT5G61850
AT5G61850 floral meristem identity control protein LEAFY (LFY)

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
LFYarTal_v1_Chr5_+_24844248_24844295-0.342.3e-01Click!

Activity profile of AT5G61850 motif

Sorted Z-values of AT5G61850 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr2_-_17712290_17712330 6.01 AT2G42540.2
AT2G42540.4
AT2G42540.1
AT2G42540.3
COR15A
cold-regulated 15a
arTal_v1_Chr2_-_17710433_17710433 4.78 AT2G42530.1
COR15B
cold regulated 15b
arTal_v1_Chr5_+_17987591_17987591 3.16 AT5G44590.2
AT5G44590.1
AT5G44590
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr2_-_16603059_16603061 2.81 AT2G39800.2
AT2G39800.4
AT2G39800.3
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
arTal_v1_Chr4_-_9607402_9607402 2.54 AT4G17090.1
CT-BMY
chloroplast beta-amylase
arTal_v1_Chr1_+_3019639_3019639 2.51 AT1G09350.1
GolS3
galactinol synthase 3
arTal_v1_Chr2_-_17202848_17202848 2.34 AT2G41250.1
AT2G41250
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
arTal_v1_Chr1_-_18238497_18238497 2.33 AT1G49310.1
AT1G49310
transmembrane protein
arTal_v1_Chr2_-_16603319_16603319 2.32 AT2G39800.1
P5CS1
delta1-pyrroline-5-carboxylate synthase 1
arTal_v1_Chr1_+_18132545_18132545 2.29 AT1G49010.1
AT1G49010
Duplicated homeodomain-like superfamily protein
arTal_v1_Chr1_+_3020221_3020221 2.28 AT1G09350.2
GolS3
galactinol synthase 3
arTal_v1_Chr5_-_19807853_19807853 2.22 AT5G48850.1
ATSDI1
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr4_+_8827600_8827710 2.21 AT4G15430.2
AT4G15430.1
AT4G15430
ERD (early-responsive to dehydration stress) family protein
arTal_v1_Chr3_-_17475274_17475274 2.19 AT3G47420.3
AT3G47420.1
AT3G47420.2
G3Pp1
putative glycerol-3-phosphate transporter 1
arTal_v1_Chr3_+_16818347_16818347 2.17 AT3G45780.2
PHOT1
phototropin 1
arTal_v1_Chr5_+_9261479_9261580 2.13 AT5G26570.1
AT5G26570.2
PWD
chloroplastidic phosphoglucan, water dikinase (ATGWD3)
arTal_v1_Chr2_-_18811085_18811125 2.11 AT2G45660.2
AT2G45660.1
AGL20
AGAMOUS-like 20
arTal_v1_Chr3_+_16816721_16816721 2.11 AT3G45780.1
PHOT1
phototropin 1
arTal_v1_Chr3_+_22635803_22635816 2.07 AT3G61160.3
AT3G61160.6
AT3G61160.5
AT3G61160.4
AT3G61160.2
AT3G61160.1
AT3G61160
Protein kinase superfamily protein
arTal_v1_Chr1_+_25999837_25999837 2.05 AT1G69160.1
AT1G69160
suppressor
arTal_v1_Chr1_+_24472873_24472873 2.04 AT1G65800.1
AT1G65800.2
RK2
receptor kinase 2
arTal_v1_Chr1_-_10399873_10399873 2.02 AT1G29720.1
AT1G29720
Leucine-rich repeat transmembrane protein kinase
arTal_v1_Chr3_-_2569700_2569700 2.00 AT3G08040.2
AT3G08040.1
FRD3
MATE efflux family protein
arTal_v1_Chr1_-_23716170_23716206 1.95 AT1G63880.2
AT1G63880.1
AT1G63880
Disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr4_-_1500100_1500100 1.92 AT4G03400.2
DFL2
Auxin-responsive GH3 family protein
arTal_v1_Chr1_+_8046073_8046073 1.92 AT1G22730.1
AT1G22730
MA3 domain-containing protein
arTal_v1_Chr5_-_20720681_20720681 1.92 AT5G50920.1
CLPC1
CLPC homologue 1
arTal_v1_Chr3_-_20629295_20629295 1.90 AT3G55610.1
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
arTal_v1_Chr3_-_4974521_4974534 1.90 AT3G14810.1
AT3G14810.2
MSL5
mechanosensitive channel of small conductance-like 5
arTal_v1_Chr1_-_26434538_26434538 1.89 AT1G70200.1
AT1G70200
RNA-binding (RRM/RBD/RNP motifs) family protein
arTal_v1_Chr4_+_8839256_8839387 1.88 AT4G15450.1
AT4G15450.2
AT4G15450
Senescence/dehydration-associated protein-like protein
arTal_v1_Chr1_-_28194068_28194068 1.87 AT1G75100.1
JAC1
J-domain protein required for chloroplast accumulation response 1
arTal_v1_Chr2_-_17065813_17065813 1.86 AT2G40900.1
UMAMIT11
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr5_-_24083528_24083562 1.86 AT5G59780.2
AT5G59780.1
AT5G59780.3
MYB59
myb domain protein 59
arTal_v1_Chr5_-_1508927_1508927 1.86 AT5G05110.1
AT5G05110
Cystatin/monellin family protein
arTal_v1_Chr3_+_4937172_4937317 1.83 AT3G14690.2
AT3G14690.1
CYP72A15
cytochrome P450, family 72, subfamily A, polypeptide 15
arTal_v1_Chr1_-_10475969_10475969 1.81 AT1G29920.1
CAB2
chlorophyll A/B-binding protein 2
arTal_v1_Chr3_-_20629093_20629093 1.80 AT3G55610.2
P5CS2
delta 1-pyrroline-5-carboxylate synthase 2
arTal_v1_Chr5_-_8160343_8160343 1.80 AT5G24120.2
AT5G24120.1
SIGE
sigma factor E
arTal_v1_Chr4_-_1501599_1501599 1.74 AT4G03400.1
DFL2
Auxin-responsive GH3 family protein
arTal_v1_Chr3_+_5081780_5081908 1.72 AT3G15095.2
AT3G15095.1
AT3G15095.3
HCF243
Serine/Threonine-kinase pakA-like protein
arTal_v1_Chr1_-_22096620_22096620 1.72 AT1G60010.1
AT1G60010
D-ribose-binding periplasmic protein
arTal_v1_Chr5_-_4392227_4392227 1.71 AT5G13630.2
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
arTal_v1_Chr5_-_4392429_4392429 1.71 AT5G13630.1
GUN5
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
arTal_v1_Chr2_-_19287590_19287590 1.71 AT2G46940.1
AT2G46940
fold protein
arTal_v1_Chr2_+_9879275_9879275 1.69 AT2G23200.1
AT2G23200
Protein kinase superfamily protein
arTal_v1_Chr3_-_14879792_14879792 1.66 AT3G42790.1
AL3
alfin-like 3
arTal_v1_Chr2_-_1149261_1149261 1.65 AT2G03750.1
AT2G03750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr3_-_23344801_23344801 1.65 AT3G63190.1
RRF
ribosome recycling factor, chloroplast precursor
arTal_v1_Chr5_-_6800903_6800977 1.64 AT5G20140.1
AT5G20140.2
HBP5
SOUL heme-binding family protein
arTal_v1_Chr3_-_15182664_15182664 1.63 AT3G43190.2
SUS4
sucrose synthase 4
arTal_v1_Chr2_+_17582673_17582692 1.63 AT2G42190.2
AT2G42190.1
AT2G42190.3
AT2G42190
rho GTPase-activating gacO-like protein
arTal_v1_Chr1_-_23818481_23818481 1.62 AT1G64170.1
CHX16
cation/H+ exchanger 16
arTal_v1_Chr3_+_16945230_16945230 1.62 AT3G46130.2
AT3G46130.1
MYB48
myb domain protein 48
arTal_v1_Chr5_-_8659352_8659352 1.61 AT5G25110.1
CIPK25
CBL-interacting protein kinase 25
arTal_v1_Chr5_+_25400317_25400317 1.61 AT5G63420.1
emb2746
RNA-metabolising metallo-beta-lactamase family protein
arTal_v1_Chr3_-_8085669_8085669 1.61 AT3G22840.1
ELIP1
Chlorophyll A-B binding family protein
arTal_v1_Chr1_-_26800483_26800483 1.61 AT1G71040.1
LPR2
Cupredoxin superfamily protein
arTal_v1_Chr4_+_8708841_8708841 1.60 AT4G15248.1
BBX30
B-box type zinc finger family protein
arTal_v1_Chr3_+_20479121_20479121 1.59 AT3G55250.1
PDE329
calcium homeostasis regulator
arTal_v1_Chr5_-_24955503_24955503 1.59 AT5G62140.1
AT5G62140
ATP-dependent Clp protease ATP-binding subunit
arTal_v1_Chr3_+_16945433_16945525 1.58 AT3G46130.3
AT3G46130.4
MYB48
myb domain protein 48
arTal_v1_Chr4_-_10647079_10647280 1.58 AT4G19520.1
AT4G19520.3
AT4G19520.2
AT4G19520.5
AT4G19520.4
AT4G19520
disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr3_-_82182_82182 1.56 AT3G01260.1
AT3G01260
Galactose mutarotase-like superfamily protein
arTal_v1_Chr1_+_14158452_14158452 1.55 AT1G37130.1
NIA2
nitrate reductase 2
arTal_v1_Chr2_+_17507343_17507343 1.54 AT2G41940.1
ZFP8
zinc finger protein 8
arTal_v1_Chr5_-_8160163_8160163 1.54 AT5G24120.3
SIGE
sigma factor E
arTal_v1_Chr1_-_21235292_21235292 1.54 AT1G56650.1
PAP1
production of anthocyanin pigment 1
arTal_v1_Chr2_+_417427_417427 1.53 AT2G01910.2
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
arTal_v1_Chr1_-_26540818_26540818 1.53 AT1G70420.1
AT1G70420
DNA ligase-like protein, putative (DUF1645)
arTal_v1_Chr3_+_4922131_4922131 1.52 AT3G14650.1
CYP72A11
cytochrome P450, family 72, subfamily A, polypeptide 11
arTal_v1_Chr1_-_467873_467880 1.52 AT1G02340.2
AT1G02340.1
HFR1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr1_+_2152798_2152880 1.50 AT1G07010.1
AT1G07010.2
AT1G07010.3
SLP1
Calcineurin-like metallo-phosphoesterase superfamily protein
arTal_v1_Chr3_-_19375960_19375960 1.49 AT3G52240.1
AT3G52240
transcriptional regulator ATRX
arTal_v1_Chr2_+_7945998_7945999 1.48 AT2G18280.2
AT2G18280.1
TLP2
tubby like protein 2
arTal_v1_Chr1_+_7508701_7508701 1.48 AT1G21450.1
SCL1
SCARECROW-like 1
arTal_v1_Chr3_-_6879543_6879543 1.47 AT3G19810.1
AT3G19810.2
AT3G19810
BTB/POZ domain protein, putative (DUF177)
arTal_v1_Chr5_-_19530316_19530430 1.47 AT5G48160.2
AT5G48160.1
OBE2
potyvirus VPg interacting protein (DUF1423)
arTal_v1_Chr1_-_29869784_29869784 1.47 AT1G79410.1
OCT5
organic cation/carnitine transporter5
arTal_v1_Chr4_-_18190556_18190608 1.45 AT4G39040.2
AT4G39040.1
AT4G39040
RNA-binding CRS1 / YhbY (CRM) domain protein
arTal_v1_Chr4_+_13828422_13828422 1.45 AT4G27710.2
CYP709B3
cytochrome P450, family 709, subfamily B, polypeptide 3
arTal_v1_Chr4_+_10103866_10103866 1.45 AT4G18280.1
AT4G18280
glycine-rich cell wall protein-like protein
arTal_v1_Chr1_-_2211021_2211021 1.45 AT1G07200.1
AT1G07200
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr4_+_13828189_13828189 1.44 AT4G27710.1
CYP709B3
cytochrome P450, family 709, subfamily B, polypeptide 3
arTal_v1_Chr2_-_856725_856725 1.43 AT2G02950.1
PKS1
phytochrome kinase substrate 1
arTal_v1_Chr1_+_3349082_3349220 1.41 AT1G10210.1
AT1G10210.3
AT1G10210.2
MPK1
mitogen-activated protein kinase 1
arTal_v1_Chr3_+_2946239_2946382 1.41 AT3G09600.1
AT3G09600.2
AT3G09600.4
AT3G09600.3
AT3G09600.7
AT3G09600.6
AT3G09600.5
AT3G09600.8
AT3G09600.9
RVE8
Homeodomain-like superfamily protein
arTal_v1_Chr2_-_9056481_9056481 1.41 AT2G21130.1
AT2G21130
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
arTal_v1_Chr5_+_7529292_7529357 1.41 AT5G22640.3
AT5G22640.1
AT5G22640.2
emb1211
MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein
arTal_v1_Chr1_+_27991165_27991165 1.40 AT1G74470.1
AT1G74470
Pyridine nucleotide-disulfide oxidoreductase family protein
arTal_v1_Chr1_-_28466971_28466971 1.38 AT1G75820.1
CLV1
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr5_-_3430492_3430492 1.38 AT5G10860.1
CBSX3
Cystathionine beta-synthase (CBS) family protein
arTal_v1_Chr4_-_15412451_15412451 1.38 AT4G31875.1
AT4G31875
hypothetical protein
arTal_v1_Chr5_+_17000259_17000259 1.36 AT5G42520.1
AT5G42520.2
AT5G42520.3
BPC6
basic pentacysteine 6
arTal_v1_Chr3_+_7812861_7812876 1.36 AT3G22150.2
AT3G22150.1
AT3G22150
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr3_-_15184105_15184105 1.35 AT3G43190.1
SUS4
sucrose synthase 4
arTal_v1_Chr3_-_16558169_16558169 1.35 AT3G45210.1
AT3G45210
transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
arTal_v1_Chr1_-_6860376_6860563 1.35 AT1G19835.1
AT1G19835.4
AT1G19835.6
AT1G19835.3
AT1G19835
filament-like protein (DUF869)
arTal_v1_Chr3_-_21706074_21706137 1.33 AT3G58670.2
AT3G58670.3
AT3G58670.4
AT3G58670.1
AT3G58670
2-aminoethanethiol dioxygenase, putative (DUF1637)
arTal_v1_Chr5_-_23501416_23501416 1.33 AT5G58070.1
TIL
temperature-induced lipocalin
arTal_v1_Chr4_+_17739514_17739514 1.33 AT4G37750.1
ANT
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr1_+_25756600_25756600 1.33 AT1G68585.1
AT1G68585
hypothetical protein
arTal_v1_Chr1_-_7573846_7573847 1.33 AT1G21600.2
AT1G21600.1
PTAC6
plastid transcriptionally active 6
arTal_v1_Chr1_-_28560436_28560473 1.33 AT1G76120.2
AT1G76120.1
AT1G76120
Pseudouridine synthase family protein
arTal_v1_Chr5_-_14253434_14253434 1.33 AT5G36210.1
AT5G36210
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_-_25071111_25071111 1.32 AT5G62430.1
CDF1
cycling DOF factor 1
arTal_v1_Chr1_+_13225168_13225168 1.32 AT1G35720.1
ANNAT1
annexin 1
arTal_v1_Chr4_-_15614544_15614544 1.31 AT4G32340.1
AT4G32340
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr4_-_13958107_13958107 1.31 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_+_10477885_10477885 1.31 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
arTal_v1_Chr2_+_1076863_1076863 1.31 AT2G03550.1
AT2G03550
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_+_5237970_5238178 1.30 AT5G16030.1
AT5G16030.4
AT5G16030.2
AT5G16030.3
AT5G16030
mental retardation GTPase activating protein
arTal_v1_Chr1_-_7513396_7513481 1.30 AT1G21460.2
AT1G21460.1
SWEET1
Nodulin MtN3 family protein
arTal_v1_Chr3_+_19148871_19148907 1.29 AT3G51630.2
AT3G51630.1
WNK5
with no lysine (K) kinase 5
arTal_v1_Chr5_-_24691095_24691187 1.29 AT5G61420.1
AT5G61420.2
MYB28
myb domain protein 28
arTal_v1_Chr5_+_26664842_26664842 1.29 AT5G66790.1
AT5G66790
Protein kinase superfamily protein
arTal_v1_Chr1_+_9171118_9171118 1.29 AT1G26550.1
AT1G26550
FKBP-like peptidyl-prolyl cis-trans isomerase family protein
arTal_v1_Chr5_-_21123133_21123133 1.28 AT5G52010.1
AT5G52010
C2H2-like zinc finger protein
arTal_v1_Chr1_-_20948969_20948969 1.28 AT1G56010.1
NAC1
NAC domain containing protein 1
arTal_v1_Chr2_+_11058944_11058944 1.28 AT2G25930.1
ELF3
hydroxyproline-rich glycoprotein family protein
arTal_v1_Chr1_-_6153982_6153982 1.26 AT1G17880.1
BTF3
basic transcription factor 3
arTal_v1_Chr3_-_399798_399798 1.26 AT3G02170.2
AT3G02170.3
LNG2
longifolia2
arTal_v1_Chr1_-_2212718_2212718 1.26 AT1G07200.2
AT1G07200
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr2_+_7826811_7826817 1.26 AT2G17990.2
AT2G17990.1
AT2G17990
polyamine-modulated factor 1-binding protein
arTal_v1_Chr5_-_7377667_7377776 1.25 AT5G22290.2
AT5G22290.1
NAC089
NAC domain containing protein 89
arTal_v1_Chr1_-_8935544_8935544 1.25 AT1G25440.1
BBX15
B-box type zinc finger protein with CCT domain-containing protein
arTal_v1_Chr1_-_20949281_20949281 1.24 AT1G56010.2
NAC1
NAC domain containing protein 1
arTal_v1_Chr2_-_1017222_1017222 1.24 AT2G03340.1
WRKY3
WRKY DNA-binding protein 3
arTal_v1_Chr5_-_7255944_7256156 1.24 AT5G21950.7
AT5G21950.2
AT5G21950.3
AT5G21950.1
AT5G21950.4
AT5G21950.6
AT5G21950.5
AT5G21950
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_-_15420109_15420109 1.24 AT5G38510.3
AT5G38510
Rhomboid-related intramembrane serine protease family protein
arTal_v1_Chr3_+_2016246_2016329 1.23 AT3G06510.1
AT3G06510.2
SFR2
Glycosyl hydrolase superfamily protein
arTal_v1_Chr5_-_24055660_24055660 1.23 AT5G59700.1
AT5G59700
Protein kinase superfamily protein
arTal_v1_Chr3_-_7709933_7709933 1.22 AT3G21890.1
BBX31
B-box type zinc finger family protein
arTal_v1_Chr4_-_15991536_15991633 1.22 AT4G33150.1
AT4G33150.2
AT4G33150
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
arTal_v1_Chr1_-_27155793_27155793 1.22 AT1G72160.1
AT1G72160
Sec14p-like phosphatidylinositol transfer family protein
arTal_v1_Chr1_-_6802652_6802906 1.22 AT1G19660.2
AT1G19660.3
AT1G19660.1
AT1G19660
Wound-responsive family protein
arTal_v1_Chr1_+_28865314_28865314 1.22 AT1G76880.1
AT1G76880
Duplicated homeodomain-like superfamily protein
arTal_v1_Chr1_-_26726652_26726652 1.22 AT1G70890.1
MLP43
MLP-like protein 43
arTal_v1_Chr3_-_3741662_3741753 1.21 AT3G11850.1
AT3G11850.2
AT3G11850
myosin-binding protein (Protein of unknown function, DUF593)
arTal_v1_Chr5_+_23225951_23225951 1.21 AT5G57340.2
AT5G57340.1
AT5G57340
ras guanine nucleotide exchange factor Q-like protein
arTal_v1_Chr5_-_14256284_14256284 1.21 AT5G36220.2
AT5G36220.1
CYP81D1
cytochrome p450 81d1
arTal_v1_Chr3_-_19281345_19281393 1.20 AT3G51950.3
AT3G51950.1
AT3G51950.2
AT3G51950
Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
arTal_v1_Chr2_+_416021_416021 1.20 AT2G01910.1
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
arTal_v1_Chr2_-_18454930_18454930 1.19 AT2G44760.1
AT2G44760
dihydroorotate dehydrogenase (DUF3598)
arTal_v1_Chr5_-_716347_716390 1.19 AT5G03050.1
AT5G03050.2
AT5G03050
knotted 1-binding protein
arTal_v1_Chr3_+_5047376_5047400 1.19 AT3G14990.1
AT3G14990.3
DJ1A
Class I glutamine amidotransferase-like superfamily protein
arTal_v1_Chr3_+_5047589_5047589 1.19 AT3G14990.2
DJ1A
Class I glutamine amidotransferase-like superfamily protein
arTal_v1_Chr3_+_21092183_21092183 1.18 AT3G57000.1
AT3G57000
nucleolar essential protein-like protein
arTal_v1_Chr5_-_2130509_2130509 1.18 AT5G06850.1
FTIP1
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
arTal_v1_Chr5_-_15420472_15420472 1.18 AT5G38510.2
AT5G38510
Rhomboid-related intramembrane serine protease family protein
arTal_v1_Chr5_-_7419335_7419335 1.17 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
arTal_v1_Chr2_+_16399969_16399969 1.17 AT2G39270.1
AT2G39270
P-loop containing nucleoside triphosphate hydrolases superfamily protein
arTal_v1_Chr1_+_29575806_29575806 1.17 AT1G78630.1
emb1473
Ribosomal protein L13 family protein
arTal_v1_Chr5_+_18816585_18816604 1.17 AT5G46390.2
AT5G46390.1
AT5G46390
Peptidase S41 family protein
arTal_v1_Chr5_+_426226_426226 1.17 AT5G02160.1
AT5G02160
transmembrane protein
arTal_v1_Chr3_+_20558102_20558102 1.17 AT3G55450.2
PBL1
PBS1-like 1
arTal_v1_Chr4_-_17687105_17687105 1.16 AT4G37640.1
ACA2
calcium ATPase 2
arTal_v1_Chr4_-_13606468_13606468 1.16 AT4G27130.1
AT4G27130
Translation initiation factor SUI1 family protein
arTal_v1_Chr1_+_2238017_2238154 1.16 AT1G07280.1
AT1G07280.2
AT1G07280.4
AT1G07280.3
AT1G07280
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr4_-_11648644_11648644 1.16 AT4G21960.1
PRXR1
Peroxidase superfamily protein
arTal_v1_Chr1_-_6152222_6152222 1.16 AT1G17870.1
EGY3
ethylene-dependent gravitropism-deficient and yellow-green-like 3
arTal_v1_Chr1_-_27755297_27755297 1.16 AT1G73810.1
AT1G73810
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
arTal_v1_Chr5_-_6946514_6946514 1.16 AT5G20520.1
WAV2
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_-_22236551_22236551 1.16 AT5G54730.2
G18F
yeast autophagy 18 F-like protein
arTal_v1_Chr5_+_18974022_18974022 1.15 AT5G46760.1
MYC3
Basic helix-loop-helix (bHLH) DNA-binding family protein
arTal_v1_Chr5_-_7054281_7054281 1.15 AT5G20830.3
SUS1
sucrose synthase 1
arTal_v1_Chr2_+_8855302_8855358 1.15 AT2G20570.1
AT2G20570.3
AT2G20570.2
GPRI1
GBF's pro-rich region-interacting factor 1
arTal_v1_Chr1_-_20930017_20930017 1.14 AT1G55960.2
AT1G55960
Polyketide cyclase/dehydrase and lipid transport superfamily protein
arTal_v1_Chr5_-_15420638_15420638 1.14 AT5G38510.1
AT5G38510
Rhomboid-related intramembrane serine protease family protein
arTal_v1_Chr5_-_23681935_23681935 1.14 AT5G58590.1
RANBP1
RAN binding protein 1
arTal_v1_Chr1_+_7143805_7143805 1.14 AT1G20620.7
CAT3
catalase 3
arTal_v1_Chr5_+_17148808_17148923 1.13 AT5G42760.2
AT5G42760.1
AT5G42760
Leucine carboxyl methyltransferase
arTal_v1_Chr5_-_25656067_25656067 1.13 AT5G64110.1
AT5G64110
Peroxidase superfamily protein
arTal_v1_Chr3_-_19280823_19280823 1.13 AT3G51950.4
AT3G51950
Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
arTal_v1_Chr3_+_20557644_20557644 1.13 AT3G55450.1
PBL1
PBS1-like 1
arTal_v1_Chr5_+_26292372_26292372 1.13 AT5G65710.1
HSL2
HAESA-like 2
arTal_v1_Chr1_-_12003005_12003005 1.13 AT1G33102.1
AT1G33102
hypothetical protein
arTal_v1_Chr1_-_20930209_20930209 1.12 AT1G55960.1
AT1G55960
Polyketide cyclase/dehydrase and lipid transport superfamily protein
arTal_v1_Chr5_+_937817_937819 1.12 AT5G03660.3
AT5G03660.1
AT5G03660
transcriptional activator (DUF662)
arTal_v1_Chr1_+_7142972_7143133 1.12 AT1G20620.1
AT1G20620.5
AT1G20620.2
AT1G20620.4
AT1G20620.6
CAT3
catalase 3
arTal_v1_Chr5_-_4074619_4074619 1.12 AT5G12900.1
AT5G12900
DNA double-strand break repair RAD50 ATPase
arTal_v1_Chr5_+_2941798_2941798 1.12 AT5G09450.1
AT5G09450
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_-_5872782_5872782 1.12 AT5G17790.1
VAR3
zinc finger (Ran-binding) family protein
arTal_v1_Chr3_+_10451403_10451541 1.12 AT3G28080.4
AT3G28080.3
AT3G28080.6
AT3G28080.7
AT3G28080.5
AT3G28080.1
AT3G28080.2
UMAMIT47
nodulin MtN21 /EamA-like transporter family protein
arTal_v1_Chr5_+_6802282_6802282 1.12 AT5G20150.1
SPX1
SPX domain-containing protein 1
arTal_v1_Chr3_+_23004788_23004844 1.11 AT3G62130.1
AT3G62130.2
LCD
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
arTal_v1_Chr1_+_28631223_28631223 1.11 AT1G76320.2
AT1G76320.3
AT1G76320.4
AT1G76320.1
FRS4
FAR1-related sequence 4
arTal_v1_Chr2_+_7827066_7827066 1.11 AT2G17990.3
AT2G17990
polyamine-modulated factor 1-binding protein
arTal_v1_Chr3_+_21707247_21707247 1.11 AT3G58680.1
MBF1B
multiprotein bridging factor 1B
arTal_v1_Chr5_-_7054713_7054713 1.11 AT5G20830.1
SUS1
sucrose synthase 1
arTal_v1_Chr5_-_17626487_17626487 1.11 AT5G43840.1
HSFA6A
heat shock transcription factor A6A
arTal_v1_Chr1_-_3348132_3348139 1.11 AT1G10200.2
AT1G10200.1
WLIM1
GATA type zinc finger transcription factor family protein
arTal_v1_Chr5_-_23893665_23893769 1.10 AT5G59210.2
AT5G59210.1
AT5G59210
myosin heavy chain-like protein
arTal_v1_Chr5_+_8661970_8661970 1.10 AT5G25120.1
CYP71B11
cytochrome p450, family 71, subfamily B, polypeptide 11
arTal_v1_Chr1_+_12256474_12256493 1.10 AT1G33790.3
AT1G33790.4
AT1G33790.5
AT1G33790
jacalin lectin family protein
arTal_v1_Chr1_-_25875662_25875662 1.10 AT1G68830.1
STN7
Serine/Threonine kinase domain protein
arTal_v1_Chr3_-_7808046_7808046 1.10 AT3G22142.1
AT3G22142
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
arTal_v1_Chr1_+_807361_807396 1.09 AT1G03290.2
AT1G03290.3
AT1G03290.4
AT1G03290.5
AT1G03290.6
AT1G03290.1
AT1G03290
ELKS/Rab6-interacting/CAST family protein
arTal_v1_Chr5_-_22237370_22237370 1.09 AT5G54730.1
G18F
yeast autophagy 18 F-like protein
arTal_v1_Chr1_-_2316507_2316507 1.08 AT1G07530.1
SCL14
SCARECROW-like 14

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G61850

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 8.8 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.9 1.9 GO:0035865 cellular response to potassium ion(GO:0035865)
0.9 4.3 GO:0034766 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.8 2.3 GO:0035606 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.7 2.9 GO:0000023 maltose metabolic process(GO:0000023)
0.7 6.0 GO:0009819 drought recovery(GO:0009819)
0.7 3.3 GO:0072708 response to sorbitol(GO:0072708)
0.6 0.6 GO:1900407 regulation of cellular response to oxidative stress(GO:1900407)
0.6 3.7 GO:1902884 positive regulation of response to oxidative stress(GO:1902884)
0.6 1.8 GO:0009093 cysteine catabolic process(GO:0009093)
0.6 1.8 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.6 3.5 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.5 1.5 GO:0046740 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.5 1.5 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.5 2.7 GO:0031116 positive regulation of microtubule polymerization or depolymerization(GO:0031112) positive regulation of microtubule polymerization(GO:0031116)
0.4 2.0 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.4 1.6 GO:0019388 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.4 3.8 GO:0050879 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.4 1.8 GO:0046713 borate transport(GO:0046713)
0.3 2.1 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.3 1.0 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.3 8.5 GO:0071483 cellular response to blue light(GO:0071483)
0.3 1.0 GO:0016118 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.3 1.0 GO:0072526 pyridine-containing compound catabolic process(GO:0072526)
0.3 0.6 GO:0043271 negative regulation of ion transport(GO:0043271)
0.3 1.5 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.3 0.9 GO:0033194 response to hydroperoxide(GO:0033194) response to methyl methanesulfonate(GO:0072702)
0.3 1.2 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.3 0.8 GO:0016237 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.3 0.6 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.3 0.8 GO:2001294 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.3 0.5 GO:0046352 disaccharide catabolic process(GO:0046352)
0.3 0.8 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.3 2.7 GO:0009942 longitudinal axis specification(GO:0009942)
0.3 1.3 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.3 0.8 GO:0019279 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.3 0.8 GO:1904062 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.3 0.8 GO:0009915 phloem sucrose loading(GO:0009915)
0.3 0.8 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.3 0.8 GO:1900033 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.2 2.2 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.2 1.9 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.2 1.4 GO:0010189 fat-soluble vitamin metabolic process(GO:0006775) vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360) fat-soluble vitamin biosynthetic process(GO:0042362)
0.2 1.6 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.2 1.8 GO:0006821 chloride transport(GO:0006821)
0.2 0.7 GO:1900151 regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.2 0.7 GO:0035017 cuticle pattern formation(GO:0035017)
0.2 0.7 GO:0009233 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
0.2 1.5 GO:0009745 sucrose mediated signaling(GO:0009745)
0.2 1.1 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.2 0.7 GO:0010254 nectary development(GO:0010254)
0.2 0.9 GO:0044154 histone H3-K14 acetylation(GO:0044154)
0.2 0.6 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.2 0.6 GO:0010447 response to acidic pH(GO:0010447)
0.2 1.9 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.2 0.6 GO:0009590 detection of gravity(GO:0009590)
0.2 1.0 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.2 0.4 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.2 0.8 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.2 0.6 GO:0000578 embryonic axis specification(GO:0000578)
0.2 2.8 GO:0032544 plastid translation(GO:0032544)
0.2 1.6 GO:0048564 photosystem I assembly(GO:0048564)
0.2 0.8 GO:0006481 C-terminal protein methylation(GO:0006481)
0.2 1.7 GO:0080183 response to photooxidative stress(GO:0080183)
0.2 1.0 GO:0042391 regulation of membrane potential(GO:0042391)
0.2 1.3 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.2 2.0 GO:0043155 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.2 3.1 GO:0010380 regulation of chlorophyll biosynthetic process(GO:0010380)
0.2 1.1 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.2 0.9 GO:0006968 cellular defense response(GO:0006968)
0.2 4.9 GO:0006012 galactose metabolic process(GO:0006012)
0.2 0.2 GO:0010324 membrane invagination(GO:0010324)
0.2 2.9 GO:0009638 phototropism(GO:0009638)
0.2 0.9 GO:0048281 transpiration(GO:0010148) inflorescence morphogenesis(GO:0048281)
0.2 0.8 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.2 0.7 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.2 1.0 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.2 1.0 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.2 0.8 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.2 0.5 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.2 1.1 GO:0042548 regulation of photosynthesis, light reaction(GO:0042548)
0.2 1.4 GO:0043966 histone H3 acetylation(GO:0043966)
0.2 2.5 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.2 1.1 GO:0031930 chloroplast-nucleus signaling pathway(GO:0010019) mitochondria-nucleus signaling pathway(GO:0031930)
0.2 1.1 GO:0071333 cellular response to glucose stimulus(GO:0071333)
0.1 1.2 GO:0051653 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.1 0.9 GO:0006567 threonine catabolic process(GO:0006567)
0.1 0.1 GO:0010063 positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.1 1.3 GO:0060866 leaf abscission(GO:0060866)
0.1 3.8 GO:0090421 embryonic meristem initiation(GO:0090421)
0.1 0.4 GO:0006984 ER-nucleus signaling pathway(GO:0006984)
0.1 0.5 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.1 0.8 GO:0016120 carotene biosynthetic process(GO:0016120)
0.1 0.4 GO:0046156 siroheme biosynthetic process(GO:0019354) siroheme metabolic process(GO:0046156)
0.1 0.7 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 4.1 GO:0010025 wax biosynthetic process(GO:0010025)
0.1 1.3 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.1 0.4 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.1 0.4 GO:0090224 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.1 0.4 GO:0048442 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 0.4 GO:0048479 style development(GO:0048479)
0.1 0.3 GO:0017196 N-terminal protein amino acid acetylation(GO:0006474) N-terminal peptidyl-methionine acetylation(GO:0017196)
0.1 0.8 GO:0080120 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.1 0.3 GO:0043268 positive regulation of potassium ion transport(GO:0043268)
0.1 0.4 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.1 2.6 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.1 2.9 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.1 0.4 GO:0071481 cellular response to X-ray(GO:0071481)
0.1 0.6 GO:0010032 meiotic chromosome condensation(GO:0010032)
0.1 0.5 GO:1904356 regulation of telomere maintenance via telomerase(GO:0032210) regulation of telomere maintenance via telomere lengthening(GO:1904356) negative regulation of DNA biosynthetic process(GO:2000279)
0.1 2.1 GO:0005983 starch catabolic process(GO:0005983)
0.1 1.2 GO:0046939 nucleotide phosphorylation(GO:0046939)
0.1 0.9 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.1 0.4 GO:0010219 regulation of vernalization response(GO:0010219)
0.1 1.2 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 0.9 GO:0042182 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.1 2.5 GO:0046219 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.1 0.9 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 0.6 GO:0070212 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.1 6.1 GO:0009631 cold acclimation(GO:0009631)
0.1 0.3 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.1 1.3 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 1.7 GO:0010207 photosystem II assembly(GO:0010207)
0.1 0.6 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.1 0.8 GO:0071324 cellular response to disaccharide stimulus(GO:0071324) cellular response to sucrose stimulus(GO:0071329)
0.1 0.5 GO:0060919 auxin influx(GO:0060919)
0.1 0.7 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.1 0.5 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 1.4 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 0.7 GO:0010206 photosystem II repair(GO:0010206)
0.1 17.1 GO:0046777 protein autophosphorylation(GO:0046777)
0.1 1.9 GO:0055070 copper ion homeostasis(GO:0055070)
0.1 0.7 GO:0048209 regulation of vesicle targeting, to, from or within Golgi(GO:0048209)
0.1 0.3 GO:0019499 cyanide metabolic process(GO:0019499)
0.1 2.7 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.1 0.3 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 1.2 GO:0070475 rRNA base methylation(GO:0070475)
0.1 0.2 GO:0061014 positive regulation of mRNA catabolic process(GO:0061014)
0.1 1.6 GO:0000373 Group II intron splicing(GO:0000373)
0.1 0.6 GO:0040020 regulation of meiotic nuclear division(GO:0040020)
0.1 0.2 GO:0080121 AMP transport(GO:0080121)
0.1 2.4 GO:0016556 mRNA modification(GO:0016556)
0.1 0.8 GO:0043462 regulation of ATPase activity(GO:0043462)
0.1 0.3 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.1 0.5 GO:0010196 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.1 2.7 GO:0098754 detoxification(GO:0098754)
0.1 1.4 GO:0007602 phototransduction(GO:0007602) detection of light stimulus(GO:0009583) red, far-red light phototransduction(GO:0009585)
0.1 0.5 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.1 1.0 GO:0019685 photosynthesis, dark reaction(GO:0019685)
0.1 0.7 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.1 0.9 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 0.2 GO:0070150 mitochondrial glycyl-tRNA aminoacylation(GO:0070150)
0.1 0.4 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 0.2 GO:0080168 abscisic acid transport(GO:0080168)
0.1 0.6 GO:0016045 detection of bacterium(GO:0016045)
0.1 0.8 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 0.2 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.1 0.3 GO:0016578 histone deubiquitination(GO:0016578)
0.1 1.1 GO:0051017 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.1 2.5 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 1.0 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.1 0.7 GO:0046292 formaldehyde metabolic process(GO:0046292)
0.1 0.5 GO:0044375 regulation of peroxisome size(GO:0044375)
0.1 2.5 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.1 1.4 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 0.5 GO:0042374 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.1 0.2 GO:0048255 mRNA stabilization(GO:0048255)
0.1 1.0 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 0.3 GO:0097468 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.1 0.3 GO:0097438 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.1 0.7 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.1 0.1 GO:0071493 cellular response to UV-B(GO:0071493)
0.1 0.1 GO:0040014 regulation of multicellular organism growth(GO:0040014)
0.1 0.6 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.1 0.2 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.1 1.1 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.1 0.8 GO:0009704 de-etiolation(GO:0009704)
0.1 2.1 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.1 0.8 GO:0032543 mitochondrial translation(GO:0032543)
0.1 0.2 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.1 0.5 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.1 0.4 GO:0006013 mannose metabolic process(GO:0006013)
0.1 0.4 GO:0010569 regulation of double-strand break repair via homologous recombination(GO:0010569)
0.1 1.0 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.1 1.3 GO:0051260 protein homooligomerization(GO:0051260)
0.1 1.4 GO:0030042 actin filament depolymerization(GO:0030042)
0.1 1.6 GO:0050826 response to freezing(GO:0050826)
0.1 1.4 GO:0007163 establishment or maintenance of cell polarity(GO:0007163) regulation of cell shape(GO:0008360)
0.1 0.8 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 1.5 GO:0071462 cellular response to water deprivation(GO:0042631) cellular response to water stimulus(GO:0071462)
0.1 0.5 GO:0043486 histone exchange(GO:0043486)
0.1 0.3 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 0.3 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 0.5 GO:0010540 basipetal auxin transport(GO:0010540)
0.1 0.5 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.1 0.4 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.0 0.6 GO:0010044 response to aluminum ion(GO:0010044)
0.0 0.5 GO:0045116 protein neddylation(GO:0045116)
0.0 0.6 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 3.4 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.7 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.7 GO:0032365 intracellular lipid transport(GO:0032365)
0.0 0.2 GO:0000012 single strand break repair(GO:0000012)
0.0 0.3 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.0 0.8 GO:0006900 membrane budding(GO:0006900)
0.0 0.3 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 1.3 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.0 0.1 GO:0051055 negative regulation of lipid biosynthetic process(GO:0051055)
0.0 0.2 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.0 0.8 GO:0046519 sphingoid metabolic process(GO:0046519)
0.0 0.5 GO:0050821 protein stabilization(GO:0050821)
0.0 0.7 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.0 0.8 GO:2000031 regulation of salicylic acid mediated signaling pathway(GO:2000031)
0.0 0.4 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.0 0.4 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.4 GO:0010088 phloem development(GO:0010088)
0.0 0.4 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.0 0.1 GO:0006006 glucose metabolic process(GO:0006006)
0.0 0.1 GO:0090239 transposition(GO:0032196) heterochromatin maintenance(GO:0070829) regulation of histone H4 acetylation(GO:0090239)
0.0 0.2 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.0 1.0 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.0 0.7 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 0.1 GO:0006747 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.0 0.8 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.0 0.3 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.0 0.5 GO:0010048 vernalization response(GO:0010048)
0.0 0.9 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.2 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.0 0.3 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.4 GO:0007052 mitotic spindle organization(GO:0007052)
0.0 1.8 GO:0010224 response to UV-B(GO:0010224)
0.0 2.4 GO:0006885 regulation of pH(GO:0006885)
0.0 1.2 GO:0018209 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.0 0.4 GO:0097354 protein prenylation(GO:0018342) prenylation(GO:0097354)
0.0 0.1 GO:0042787 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.0 0.1 GO:0006824 cobalt ion transport(GO:0006824)
0.0 0.6 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.0 0.3 GO:0032886 regulation of microtubule-based process(GO:0032886)
0.0 0.6 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.3 GO:1902182 shoot apical meristem development(GO:1902182)
0.0 0.2 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.0 0.3 GO:0048359 mucilage metabolic process involved in seed coat development(GO:0048359)
0.0 0.5 GO:0000165 MAPK cascade(GO:0000165)
0.0 0.2 GO:1900911 regulation of ethylene biosynthetic process(GO:0010364) regulation of sulfur amino acid metabolic process(GO:0031335) regulation of olefin metabolic process(GO:1900908) regulation of olefin biosynthetic process(GO:1900911)
0.0 0.1 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.0 0.2 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.0 0.8 GO:0018393 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.0 0.6 GO:0006614 cotranslational protein targeting to membrane(GO:0006613) SRP-dependent cotranslational protein targeting to membrane(GO:0006614)
0.0 0.4 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 0.1 GO:0009303 rRNA transcription(GO:0009303)
0.0 0.6 GO:0019252 starch biosynthetic process(GO:0019252)
0.0 1.1 GO:0006090 pyruvate metabolic process(GO:0006090)
0.0 1.1 GO:0006081 cellular aldehyde metabolic process(GO:0006081)
0.0 0.5 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.3 GO:0010375 stomatal complex patterning(GO:0010375)
0.0 1.4 GO:0016036 cellular response to phosphate starvation(GO:0016036)
0.0 0.1 GO:0071398 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.0 1.3 GO:0042176 regulation of protein catabolic process(GO:0042176)
0.0 0.2 GO:0051438 regulation of ubiquitin-protein transferase activity(GO:0051438) positive regulation of ubiquitin-protein transferase activity(GO:0051443) regulation of ubiquitin protein ligase activity(GO:1904666) positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0 1.1 GO:0006413 translational initiation(GO:0006413)
0.0 0.6 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.5 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.8 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.6 GO:0006897 endocytosis(GO:0006897)
0.0 0.1 GO:0051211 anisotropic cell growth(GO:0051211)
0.0 1.4 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.1 GO:0080113 regulation of seed growth(GO:0080113)
0.0 0.9 GO:0006414 translational elongation(GO:0006414)
0.0 0.0 GO:0007164 establishment of tissue polarity(GO:0007164)
0.0 0.4 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 0.4 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.0 0.2 GO:0090333 regulation of stomatal closure(GO:0090333)
0.0 0.1 GO:0032272 negative regulation of actin filament polymerization(GO:0030837) negative regulation of protein polymerization(GO:0032272) sequestering of actin monomers(GO:0042989) negative regulation of cytoskeleton organization(GO:0051494)
0.0 0.4 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0 0.1 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 0.9 GO:0005985 sucrose metabolic process(GO:0005985)
0.0 0.1 GO:0046208 spermine catabolic process(GO:0046208)
0.0 0.1 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.0 0.2 GO:0045727 positive regulation of translation(GO:0045727)
0.0 0.6 GO:0016125 sterol metabolic process(GO:0016125)
0.0 1.3 GO:0006417 regulation of translation(GO:0006417)
0.0 1.0 GO:0010026 trichome differentiation(GO:0010026)
0.0 0.2 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.0 0.1 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.0 0.3 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.3 GO:0006094 gluconeogenesis(GO:0006094)
0.0 0.5 GO:0009910 negative regulation of flower development(GO:0009910)
0.0 0.5 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.3 GO:0007030 Golgi organization(GO:0007030)
0.0 0.3 GO:0031348 negative regulation of defense response(GO:0031348)
0.0 0.4 GO:0044744 protein import into nucleus(GO:0006606) protein targeting to nucleus(GO:0044744)
0.0 0.3 GO:0007006 mitochondrial membrane organization(GO:0007006)
0.0 0.6 GO:0006997 nucleus organization(GO:0006997)
0.0 0.2 GO:0036297 interstrand cross-link repair(GO:0036297)
0.0 0.2 GO:0010082 regulation of root meristem growth(GO:0010082)
0.0 0.1 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.6 GO:0072329 monocarboxylic acid catabolic process(GO:0072329)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.3 GO:0016328 lateral plasma membrane(GO:0016328)
0.7 3.0 GO:0042788 polysomal ribosome(GO:0042788)
0.7 3.4 GO:0010007 magnesium chelatase complex(GO:0010007)
0.6 1.9 GO:0031897 Tic complex(GO:0031897)
0.3 5.6 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.2 1.9 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.2 0.9 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.1 0.7 GO:0005782 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.1 1.2 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.1 2.0 GO:0048500 signal recognition particle(GO:0048500)
0.1 1.4 GO:0000815 ESCRT III complex(GO:0000815)
0.1 0.4 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.1 3.2 GO:0009574 preprophase band(GO:0009574)
0.1 0.6 GO:0009569 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.1 0.7 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 0.5 GO:0097344 Rix1 complex(GO:0097344)
0.1 2.0 GO:0031965 nuclear membrane(GO:0031965)
0.1 0.5 GO:0000783 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.1 1.1 GO:0042651 thylakoid membrane(GO:0042651)
0.1 0.7 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.1 0.5 GO:0034515 proteasome storage granule(GO:0034515)
0.1 2.4 GO:0030427 site of polarized growth(GO:0030427)
0.1 0.9 GO:0030139 endocytic vesicle(GO:0030139)
0.1 0.6 GO:0000796 condensin complex(GO:0000796)
0.1 0.4 GO:0005828 kinetochore microtubule(GO:0005828)
0.1 0.9 GO:0005771 multivesicular body(GO:0005771)
0.1 0.3 GO:0031414 N-terminal protein acetyltransferase complex(GO:0031414) NatC complex(GO:0031417)
0.1 1.8 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.1 1.0 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.1 0.9 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.1 1.9 GO:0098552 side of membrane(GO:0098552)
0.1 0.4 GO:0070652 HAUS complex(GO:0070652)
0.1 0.6 GO:0000243 commitment complex(GO:0000243)
0.1 4.4 GO:0010287 plastoglobule(GO:0010287)
0.1 0.8 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.1 1.2 GO:0031358 intrinsic component of plastid outer membrane(GO:0031354) integral component of plastid outer membrane(GO:0031355) intrinsic component of chloroplast outer membrane(GO:0031358) integral component of chloroplast outer membrane(GO:0031359)
0.1 4.4 GO:0005635 nuclear envelope(GO:0005635)
0.1 0.3 GO:0034657 GID complex(GO:0034657)
0.1 0.5 GO:0016272 prefoldin complex(GO:0016272)
0.1 0.2 GO:0070505 pollen coat(GO:0070505)
0.1 0.2 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 0.7 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 2.6 GO:0009528 plastid inner membrane(GO:0009528)
0.0 0.7 GO:0000786 nucleosome(GO:0000786)
0.0 0.7 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 0.2 GO:0005838 proteasome regulatory particle(GO:0005838) proteasome regulatory particle, lid subcomplex(GO:0008541) proteasome accessory complex(GO:0022624)
0.0 0.4 GO:0005844 polysome(GO:0005844)
0.0 0.4 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.0 1.4 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.8 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.0 0.3 GO:0000439 core TFIIH complex(GO:0000439)
0.0 1.6 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.0 0.7 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.2 GO:0000922 spindle pole(GO:0000922)
0.0 0.8 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 1.0 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 0.6 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 0.1 GO:0005845 mRNA cap binding complex(GO:0005845) RNA cap binding complex(GO:0034518)
0.0 0.3 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.4 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.1 GO:0034457 Mpp10 complex(GO:0034457)
0.0 3.6 GO:0000325 plant-type vacuole(GO:0000325)
0.0 0.5 GO:0005840 ribosome(GO:0005840)
0.0 0.1 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.0 0.4 GO:0045281 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.0 0.8 GO:0032040 small-subunit processome(GO:0032040)
0.0 0.1 GO:0017059 palmitoyltransferase complex(GO:0002178) serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211)
0.0 0.9 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 1.5 GO:0016607 nuclear speck(GO:0016607)
0.0 2.0 GO:0042025 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 1.4 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.6 GO:1902554 serine/threonine protein kinase complex(GO:1902554)
0.0 2.1 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.5 GO:0005761 mitochondrial ribosome(GO:0005761)
0.0 20.7 GO:0044434 chloroplast part(GO:0044434)
0.0 1.7 GO:0015629 actin cytoskeleton(GO:0015629)
0.0 0.5 GO:0005871 kinesin complex(GO:0005871)
0.0 11.2 GO:0005783 endoplasmic reticulum(GO:0005783)
0.0 0.8 GO:0000123 histone acetyltransferase complex(GO:0000123)
0.0 59.0 GO:0005829 cytosol(GO:0005829)
0.0 0.2 GO:0005758 mitochondrial intermembrane space(GO:0005758) organelle envelope lumen(GO:0031970)
0.0 0.4 GO:0009504 cell plate(GO:0009504)
0.0 0.4 GO:0009524 phragmoplast(GO:0009524)
0.0 0.1 GO:0009526 plastid envelope(GO:0009526)
0.0 31.6 GO:0009507 chloroplast(GO:0009507)
0.0 2.0 GO:0005774 vacuolar membrane(GO:0005774)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.2 8.8 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.9 4.3 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.8 2.3 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.7 2.1 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.6 1.9 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.6 2.4 GO:0019172 glyoxalase III activity(GO:0019172)
0.6 3.4 GO:0016851 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.5 4.3 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.5 4.8 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.5 1.6 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.5 1.5 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.5 2.0 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.5 4.3 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.5 1.4 GO:0019003 GDP binding(GO:0019003)
0.4 1.7 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.4 1.2 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.4 1.2 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.4 3.1 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.4 1.9 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.4 6.3 GO:0016157 sucrose synthase activity(GO:0016157)
0.4 11.4 GO:0048029 monosaccharide binding(GO:0048029)
0.4 1.8 GO:0080139 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.3 1.3 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.3 1.6 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.3 0.9 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.3 1.1 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.3 1.4 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.3 1.1 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.3 0.8 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.3 1.1 GO:0004445 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.3 0.8 GO:0047804 cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.3 0.8 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.2 0.7 GO:0016972 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.2 1.2 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.2 0.7 GO:0008428 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.2 1.1 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)
0.2 0.6 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.2 0.9 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.2 0.6 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.2 1.9 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.2 2.8 GO:0030674 protein binding, bridging(GO:0030674)
0.2 1.0 GO:0034432 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity(GO:0008893) diphosphoric monoester hydrolase activity(GO:0016794) bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.2 1.0 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.2 0.8 GO:0003880 protein C-terminal carboxyl O-methyltransferase activity(GO:0003880) protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity(GO:0004671)
0.2 1.1 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.2 0.7 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.2 0.6 GO:0010242 oxygen evolving activity(GO:0010242)
0.2 0.5 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.2 0.9 GO:0004793 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.2 0.5 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.2 1.6 GO:0035198 miRNA binding(GO:0035198)
0.2 0.6 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.2 0.3 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.2 0.5 GO:0010521 telomerase inhibitor activity(GO:0010521)
0.2 1.7 GO:0016161 beta-amylase activity(GO:0016161)
0.2 0.5 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.2 0.8 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.2 1.4 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 1.3 GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.1 0.4 GO:0000992 polymerase III regulatory region sequence-specific DNA binding(GO:0000992) RNA polymerase III type 3 promoter sequence-specific DNA binding(GO:0001006) RNA polymerase III regulatory region DNA binding(GO:0001016) RNA polymerase III type 3 promoter DNA binding(GO:0001032)
0.1 2.9 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 1.3 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.1 0.9 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.1 0.4 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.1 1.0 GO:0008022 protein C-terminus binding(GO:0008022)
0.1 0.6 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 1.1 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.1 2.3 GO:0035064 methylated histone binding(GO:0035064)
0.1 1.7 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.1 4.9 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.1 1.2 GO:0016635 oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor(GO:0016635)
0.1 0.9 GO:0004834 tryptophan synthase activity(GO:0004834)
0.1 0.9 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.1 0.5 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.1 0.6 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.1 1.5 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.1 1.6 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.1 0.9 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.1 3.2 GO:0016168 chlorophyll binding(GO:0016168)
0.1 1.4 GO:0008312 7S RNA binding(GO:0008312)
0.1 0.7 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 0.6 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.4 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.1 4.2 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.8 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.1 0.6 GO:0009884 cytokinin receptor activity(GO:0009884)
0.1 2.2 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 2.6 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 1.5 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.1 0.8 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 0.7 GO:0000257 nitrilase activity(GO:0000257) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles(GO:0016815) nitrile hydratase activity(GO:0018822) indole-3-acetonitrile nitrilase activity(GO:0080061)
0.1 3.4 GO:0016597 amino acid binding(GO:0016597)
0.1 1.6 GO:0003746 translation elongation factor activity(GO:0003746)
0.1 1.8 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 1.9 GO:0030276 clathrin binding(GO:0030276)
0.1 0.4 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.1 1.0 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.1 1.4 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 0.3 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.1 0.3 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.1 1.0 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 0.7 GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730)
0.1 0.6 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.1 1.2 GO:0004017 adenylate kinase activity(GO:0004017)
0.1 1.6 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 0.4 GO:0004325 ferrochelatase activity(GO:0004325)
0.1 0.2 GO:0019781 NEDD8 activating enzyme activity(GO:0019781)
0.1 0.4 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.1 0.7 GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity(GO:0051903)
0.1 2.6 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.1 0.7 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744) thiamine pyrophosphate binding(GO:0030976)
0.1 1.2 GO:0008649 rRNA methyltransferase activity(GO:0008649)
0.1 0.7 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 0.9 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.1 1.1 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.1 0.4 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.1 0.4 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.1 1.3 GO:0008327 methyl-CpG binding(GO:0008327)
0.1 0.2 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.1 0.6 GO:0004373 glycogen (starch) synthase activity(GO:0004373)
0.1 1.0 GO:0019200 carbohydrate kinase activity(GO:0019200)
0.1 1.5 GO:0008187 poly-pyrimidine tract binding(GO:0008187)
0.1 0.3 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.1 0.7 GO:0070300 phosphatidic acid binding(GO:0070300)
0.1 1.3 GO:0008536 Ran GTPase binding(GO:0008536)
0.1 0.5 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 0.2 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 0.5 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 3.6 GO:0010857 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.1 1.3 GO:0004601 peroxidase activity(GO:0004601)
0.1 0.4 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.1 0.5 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 1.0 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.1 0.3 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.1 0.5 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.3 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.7 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 1.0 GO:0043424 protein histidine kinase binding(GO:0043424)
0.1 0.4 GO:0051011 microtubule minus-end binding(GO:0051011)
0.1 1.8 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.1 0.2 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.1 0.7 GO:0008097 5S rRNA binding(GO:0008097)
0.1 0.3 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.0 0.2 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.0 0.7 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 6.8 GO:0008017 microtubule binding(GO:0008017)
0.0 0.2 GO:0004556 alpha-amylase activity(GO:0004556)
0.0 1.2 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.3 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.1 GO:0004860 protein kinase inhibitor activity(GO:0004860)
0.0 1.8 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.3 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.4 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.0 0.8 GO:0019905 syntaxin binding(GO:0019905)
0.0 0.8 GO:0015248 sterol transporter activity(GO:0015248)
0.0 0.4 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 1.6 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.0 0.7 GO:0019239 deaminase activity(GO:0019239)
0.0 0.4 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.6 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.0 0.2 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.0 2.2 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.5 GO:0002020 protease binding(GO:0002020)
0.0 0.5 GO:0008252 nucleotidase activity(GO:0008252)
0.0 0.4 GO:0008318 protein prenyltransferase activity(GO:0008318)
0.0 0.8 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.2 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.0 1.3 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 1.6 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.3 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 0.3 GO:0032934 sterol binding(GO:0032934)
0.0 0.6 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.0 0.3 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.0 11.3 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 0.1 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.0 0.8 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.6 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 1.1 GO:0000976 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)
0.0 0.1 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 3.2 GO:0003779 actin binding(GO:0003779)
0.0 0.9 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 1.0 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.6 GO:0031386 protein tag(GO:0031386)
0.0 0.2 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 1.4 GO:0004843 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.0 0.5 GO:0016780 phosphotransferase activity, for other substituted phosphate groups(GO:0016780)
0.0 0.9 GO:0031072 heat shock protein binding(GO:0031072)
0.0 0.3 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 5.0 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.2 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.2 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 0.3 GO:0008641 small protein activating enzyme activity(GO:0008641)
0.0 0.9 GO:0017137 Rab GTPase binding(GO:0017137)
0.0 0.1 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.0 33.7 GO:0003700 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0 1.0 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 0.9 GO:0022884 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.0 6.9 GO:0020037 heme binding(GO:0020037)
0.0 0.6 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.8 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 2.7 GO:0042626 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances(GO:0016820) ATPase activity, coupled to transmembrane movement of substances(GO:0042626) ATPase activity, coupled to movement of substances(GO:0043492)
0.0 0.7 GO:0071949 FAD binding(GO:0071949)
0.0 0.7 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.7 GO:0005319 lipid transporter activity(GO:0005319)
0.0 2.3 GO:0005525 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 0.3 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.7 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.1 GO:0016409 palmitoyltransferase activity(GO:0016409)
0.0 1.3 GO:0003682 chromatin binding(GO:0003682)
0.0 0.4 GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor(GO:0016641)
0.0 0.3 GO:0034212 peptide N-acetyltransferase activity(GO:0034212)
0.0 0.1 GO:0046592 polyamine oxidase activity(GO:0046592)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 PID IL8 CXCR1 PATHWAY IL8- and CXCR1-mediated signaling events
0.2 0.6 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.1 0.8 PID AP1 PATHWAY AP-1 transcription factor network
0.1 1.5 PID E2F PATHWAY E2F transcription factor network
0.0 0.2 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.9 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.3 0.8 REACTOME SPRY REGULATION OF FGF SIGNALING Genes involved in Spry regulation of FGF signaling
0.2 0.7 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.2 0.6 REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX Genes involved in Signaling by TGF-beta Receptor Complex
0.2 0.6 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.2 1.4 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.1 1.1 REACTOME HOST INTERACTIONS OF HIV FACTORS Genes involved in Host Interactions of HIV factors
0.1 0.8 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.1 0.9 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.1 0.8 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.1 0.4 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.1 0.3 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 0.4 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.0 0.6 REACTOME ACTIVATION OF THE MRNA UPON BINDING OF THE CAP BINDING COMPLEX AND EIFS AND SUBSEQUENT BINDING TO 43S Genes involved in Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S
0.0 0.2 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
0.0 0.1 REACTOME G ALPHA I SIGNALLING EVENTS Genes involved in G alpha (i) signalling events