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SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for ACCCUGU

Z-value: 0.50

Motif logo

miRNA associated with seed ACCCUGU

NamemiRBASE accession
MIMAT0000253
MIMAT0000254

Activity profile of ACCCUGU motif

Sorted Z-values of ACCCUGU motif

Promoter Log-likelihood Transcript Gene Gene Info
chr5_+_167181917 1.73 ENST00000519204.1
teneurin transmembrane protein 2
chr10_+_72972281 1.47 ENST00000335350.6
unc-5 homolog B (C. elegans)
chr14_+_85996471 1.19 ENST00000330753.4
fibronectin leucine rich transmembrane protein 2
chr15_+_42066632 0.95 ENST00000457542.2
ENST00000221214.6
ENST00000260357.7
ENST00000456763.2
mitogen-activated protein kinase binding protein 1
chr7_+_20370746 0.82 ENST00000222573.4
integrin, beta 8
chr2_+_148778570 0.71 ENST00000407073.1
methyl-CpG binding domain protein 5
chr19_+_13135386 0.65 ENST00000360105.4
ENST00000588228.1
ENST00000591028.1
nuclear factor I/X (CCAAT-binding transcription factor)
chr21_-_32931290 0.60 ENST00000286827.3
T-cell lymphoma invasion and metastasis 1
chr2_+_208394616 0.59 ENST00000432329.2
ENST00000353267.3
ENST00000445803.1
cAMP responsive element binding protein 1
chr6_+_15246501 0.59 ENST00000341776.2
jumonji, AT rich interactive domain 2
chr17_+_46125707 0.57 ENST00000584137.1
ENST00000362042.3
ENST00000585291.1
ENST00000357480.5
nuclear factor, erythroid 2-like 1
chr5_-_124080203 0.56 ENST00000504926.1
zinc finger protein 608
chr6_-_10415470 0.55 ENST00000379604.2
ENST00000379613.3
transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
chr4_-_152147579 0.55 ENST00000304527.4
ENST00000455740.1
ENST00000424281.1
ENST00000409598.4
SH3 domain containing 19
chr7_-_44924939 0.51 ENST00000395699.2
purine-rich element binding protein B
chr4_+_3076388 0.50 ENST00000355072.5
huntingtin
chr1_-_9970227 0.50 ENST00000377263.1
catenin, beta interacting protein 1
chr9_+_129567282 0.48 ENST00000449886.1
ENST00000373464.4
ENST00000450858.1
zinc finger and BTB domain containing 43
chr22_+_51112800 0.46 ENST00000414786.2
SH3 and multiple ankyrin repeat domains 3
chr4_-_146859623 0.44 ENST00000379448.4
ENST00000513320.1
zinc finger protein 827
chr16_-_70719925 0.43 ENST00000338779.6
metastasis suppressor 1-like
chr1_-_38325256 0.41 ENST00000373036.4
metal-regulatory transcription factor 1
chr1_+_93913713 0.40 ENST00000604705.1
ENST00000370253.2
formin binding protein 1-like
chr1_+_210406121 0.38 ENST00000367012.3
SERTA domain containing 4
chr22_+_45559722 0.37 ENST00000347635.4
ENST00000407019.2
ENST00000424634.1
ENST00000417702.1
ENST00000425733.2
ENST00000430547.1
nucleoporin 50kDa
chr14_+_70078303 0.37 ENST00000342745.4
KIAA0247
chr3_+_183873098 0.36 ENST00000313143.3
dishevelled segment polarity protein 3
chr7_-_92463210 0.36 ENST00000265734.4
cyclin-dependent kinase 6
chr19_+_19496624 0.35 ENST00000494516.2
ENST00000360315.3
ENST00000252577.5
GATA zinc finger domain containing 2A
chr8_+_22857048 0.35 ENST00000251822.6
Rho-related BTB domain containing 2
chr19_+_13229126 0.33 ENST00000292431.4
nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
chr3_-_196159268 0.33 ENST00000381887.3
ENST00000535858.1
ENST00000428095.1
ENST00000296328.4
UBX domain protein 7
chr5_-_90679145 0.33 ENST00000265138.3
arrestin domain containing 3
chr18_+_43914159 0.32 ENST00000588679.1
ENST00000269439.7
ENST00000543885.1
ring finger protein 165
chr1_+_109632425 0.30 ENST00000338272.8
transmembrane protein 167B
chr2_+_23608064 0.30 ENST00000486442.1
kelch-like family member 29
chr5_+_63461642 0.30 ENST00000296615.6
ENST00000381081.2
ENST00000389100.4
ring finger protein 180
chr9_-_95527079 0.28 ENST00000356884.6
ENST00000375512.3
bicaudal D homolog 2 (Drosophila)
chr20_-_5591626 0.28 ENST00000379019.4
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
chr14_+_99947715 0.27 ENST00000389879.5
ENST00000557441.1
ENST00000555049.1
ENST00000555842.1
cyclin K
chr9_-_130661916 0.26 ENST00000373142.1
ENST00000373146.1
ENST00000373144.3
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr2_-_20424844 0.26 ENST00000403076.1
ENST00000254351.4
syndecan 1
chr14_+_23775971 0.26 ENST00000250405.5
BCL2-like 2
chr10_+_103113802 0.26 ENST00000370187.3
beta-transducin repeat containing E3 ubiquitin protein ligase
chr4_+_154125565 0.26 ENST00000338700.5
tripartite motif containing 2
chr3_+_107241783 0.24 ENST00000415149.2
ENST00000402543.1
ENST00000325805.8
ENST00000427402.1
bobby sox homolog (Drosophila)
chr10_-_88281494 0.24 ENST00000298767.5
wings apart-like homolog (Drosophila)
chr22_+_30279144 0.24 ENST00000401950.2
ENST00000333027.3
ENST00000445401.1
ENST00000323630.5
ENST00000351488.3
myotubularin related protein 3
chr2_-_208030647 0.23 ENST00000309446.6
Kruppel-like factor 7 (ubiquitous)
chr19_+_3880581 0.22 ENST00000450849.2
ENST00000301260.6
ENST00000398448.3
ataxia, cerebellar, Cayman type
chr4_-_53525406 0.22 ENST00000451218.2
ENST00000441222.3
ubiquitin specific peptidase 46
chr12_-_14956396 0.21 ENST00000535328.1
ENST00000261167.2
WW domain binding protein 11
chr2_+_238536207 0.21 ENST00000308482.9
leucine rich repeat (in FLII) interacting protein 1
chr18_+_9136758 0.21 ENST00000383440.2
ENST00000262126.4
ENST00000577992.1
ankyrin repeat domain 12
chr17_+_45727204 0.21 ENST00000290158.4
karyopherin (importin) beta 1
chr6_-_91006461 0.20 ENST00000257749.4
ENST00000343122.3
ENST00000406998.2
ENST00000453877.1
BTB and CNC homology 1, basic leucine zipper transcription factor 2
chr2_-_160472952 0.19 ENST00000541068.2
ENST00000355831.2
ENST00000343439.5
ENST00000392782.1
bromodomain adjacent to zinc finger domain, 2B
chr4_-_77135046 0.19 ENST00000264896.2
scavenger receptor class B, member 2
chr10_-_62149433 0.17 ENST00000280772.2
ankyrin 3, node of Ranvier (ankyrin G)
chr3_-_72496035 0.17 ENST00000477973.2
RING1 and YY1 binding protein
chr21_+_45285050 0.17 ENST00000291572.8
1-acylglycerol-3-phosphate O-acyltransferase 3
chr11_-_18656028 0.17 ENST00000336349.5
SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
chr1_+_22889953 0.17 ENST00000374644.4
ENST00000166244.3
ENST00000538803.1
EPH receptor A8
chr10_+_180987 0.16 ENST00000381591.1
zinc finger, MYND-type containing 11
chr1_+_28052456 0.16 ENST00000373954.6
ENST00000419687.2
family with sequence similarity 76, member A
chr18_+_19749386 0.16 ENST00000269216.3
GATA binding protein 6
chr4_+_79697495 0.15 ENST00000502871.1
ENST00000335016.5
BMP2 inducible kinase
chr2_-_206950781 0.15 ENST00000403263.1
INO80 complex subunit D
chr11_+_18344106 0.15 ENST00000534641.1
ENST00000525831.1
ENST00000265963.4
general transcription factor IIH, polypeptide 1, 62kDa
chr2_-_69870835 0.15 ENST00000409085.4
ENST00000406297.3
AP2 associated kinase 1
chr2_+_64681219 0.15 ENST00000238875.5
lectin, galactoside-binding-like
chr2_+_97454321 0.14 ENST00000540067.1
cyclin M4
chr22_+_39898325 0.14 ENST00000325301.2
ENST00000404569.1
mitochondrial elongation factor 1
chr17_-_76713100 0.14 ENST00000585509.1
cytohesin 1
chr5_+_179921430 0.13 ENST00000393356.1
CCR4-NOT transcription complex, subunit 6
chr16_+_50187556 0.13 ENST00000561678.1
ENST00000357464.3
PAP associated domain containing 5
chr19_-_55954230 0.13 ENST00000376325.4
shisa family member 7
chr2_-_37193606 0.12 ENST00000379213.2
ENST00000263918.4
striatin, calmodulin binding protein
chr12_-_77459306 0.12 ENST00000547316.1
ENST00000416496.2
ENST00000550669.1
ENST00000322886.7
E2F transcription factor 7
chr12_-_133405288 0.12 ENST00000204726.3
golgin A3
chr3_+_48956249 0.12 ENST00000452882.1
ENST00000430423.1
ENST00000356401.4
ENST00000449376.1
ENST00000420814.1
ENST00000449729.1
ENST00000433170.1
ariadne RBR E3 ubiquitin protein ligase 2
chr7_-_44365020 0.11 ENST00000395747.2
ENST00000347193.4
ENST00000346990.4
ENST00000258682.6
ENST00000353625.4
ENST00000421607.1
ENST00000424197.1
ENST00000502837.2
ENST00000350811.3
ENST00000395749.2
calcium/calmodulin-dependent protein kinase II beta
chrX_-_46618490 0.11 ENST00000328306.4
solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7
chr10_+_98592009 0.11 ENST00000540664.1
ENST00000371103.3
ligand dependent nuclear receptor corepressor
chr12_+_125811162 0.10 ENST00000299308.3
transmembrane protein 132B
chr8_-_4852218 0.10 ENST00000400186.3
ENST00000602723.1
CUB and Sushi multiple domains 1
chr17_-_27621125 0.09 ENST00000579665.1
ENST00000225388.4
nuclear fragile X mental retardation protein interacting protein 2
chr13_+_98086445 0.09 ENST00000245304.4
RAP2A, member of RAS oncogene family
chr1_-_19283163 0.09 ENST00000455833.2
intermediate filament family orphan 2
chr2_+_28615669 0.08 ENST00000379619.1
ENST00000264716.4
FOS-like antigen 2
chr9_-_86595503 0.08 ENST00000376281.4
ENST00000376264.2
heterogeneous nuclear ribonucleoprotein K
chr1_+_202976493 0.08 ENST00000367242.3
transmembrane protein 183A
chr11_+_65101225 0.07 ENST00000528416.1
ENST00000415073.2
ENST00000252268.4
D4, zinc and double PHD fingers family 2
chr3_+_14989076 0.06 ENST00000413118.1
ENST00000425241.1
nuclear receptor subfamily 2, group C, member 2
chr9_-_23821273 0.05 ENST00000380110.4
ELAV like neuron-specific RNA binding protein 2
chr1_+_169337172 0.05 ENST00000367807.3
ENST00000367808.3
ENST00000329281.2
ENST00000420531.1
basic leucine zipper nuclear factor 1
chr6_+_116421976 0.05 ENST00000319550.4
ENST00000419791.1
5'-nucleotidase domain containing 1
chr11_+_66025167 0.05 ENST00000394067.2
ENST00000316924.5
ENST00000421552.1
ENST00000394078.1
kinesin light chain 2
chr9_+_77112244 0.05 ENST00000376896.3
RAR-related orphan receptor B
chr7_-_112430647 0.04 ENST00000312814.6
transmembrane protein 168
chr5_-_45696253 0.04 ENST00000303230.4
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
chr4_-_111119804 0.04 ENST00000394607.3
ENST00000302274.3
ELOVL fatty acid elongase 6
chr11_+_113930291 0.04 ENST00000335953.4
zinc finger and BTB domain containing 16
chr12_+_4918342 0.04 ENST00000280684.3
ENST00000433855.1
potassium voltage-gated channel, shaker-related subfamily, member 6
chr19_+_1407517 0.04 ENST00000336761.6
ENST00000233078.4
DAZ associated protein 1
chrX_-_54384425 0.03 ENST00000375169.3
ENST00000354646.2
WNK lysine deficient protein kinase 3
chr12_-_29534074 0.03 ENST00000546839.1
ENST00000360150.4
ENST00000552155.1
ENST00000550353.1
ENST00000548441.1
ENST00000552132.1
ERGIC and golgi 2
chr17_-_56084578 0.03 ENST00000582730.2
ENST00000584773.1
ENST00000585096.1
ENST00000258962.4
serine/arginine-rich splicing factor 1
chr3_-_179754706 0.02 ENST00000465751.1
ENST00000467460.1
peroxisomal biogenesis factor 5-like
chr17_+_34058639 0.02 ENST00000268864.3
RAS-like, family 10, member B
chrX_+_49687216 0.02 ENST00000376088.3
chloride channel, voltage-sensitive 5
chr4_-_114900831 0.02 ENST00000315366.7
arylsulfatase family, member J
chr1_-_39347255 0.02 ENST00000454994.2
ENST00000357771.3
gap junction protein, alpha 9, 59kDa
chr1_+_36396677 0.01 ENST00000373191.4
ENST00000397828.2
argonaute RISC catalytic component 3
chr3_-_142166904 0.01 ENST00000264951.4
5'-3' exoribonuclease 1
chr7_-_72936531 0.01 ENST00000339594.4
bromodomain adjacent to zinc finger domain, 1B
chr9_-_115983641 0.01 ENST00000238256.3
FK506 binding protein 15, 133kDa
chr8_-_30891078 0.01 ENST00000339382.2
ENST00000475541.1
purine-rich element binding protein G
chr6_+_107811162 0.01 ENST00000317357.5
sine oculis binding protein homolog (Drosophila)
chr10_+_8096631 0.00 ENST00000379328.3
GATA binding protein 3
chr17_-_48207157 0.00 ENST00000330175.4
ENST00000503131.1
sterile alpha motif domain containing 14
chr22_+_40573921 0.00 ENST00000454349.2
ENST00000335727.9
trinucleotide repeat containing 6B

Network of associatons between targets according to the STRING database.

First level regulatory network of ACCCUGU

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 GO:0061343 cell adhesion involved in heart morphogenesis(GO:0061343)
0.2 1.5 GO:0033564 anterior/posterior axon guidance(GO:0033564)
0.2 0.5 GO:0031587 positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity(GO:0031587)
0.1 0.7 GO:0060399 positive regulation of growth hormone receptor signaling pathway(GO:0060399)
0.1 0.6 GO:0003409 optic cup structural organization(GO:0003409) oculomotor nerve morphogenesis(GO:0021622) oculomotor nerve formation(GO:0021623)
0.1 0.3 GO:0071879 positive regulation of adrenergic receptor signaling pathway(GO:0071879)
0.1 0.9 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.1 0.6 GO:1900147 Schwann cell migration(GO:0036135) regulation of Schwann cell migration(GO:1900147)
0.1 0.5 GO:0002528 regulation of vascular permeability involved in acute inflammatory response(GO:0002528)
0.1 0.5 GO:0021773 striatal medium spiny neuron differentiation(GO:0021773) positive regulation of long-term neuronal synaptic plasticity(GO:0048170) NMDA glutamate receptor clustering(GO:0097114) positive regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity(GO:2000969)
0.1 0.3 GO:0048627 myoblast development(GO:0048627)
0.1 0.6 GO:1904550 chemotaxis to arachidonic acid(GO:0034670) response to arachidonic acid(GO:1904550)
0.1 0.2 GO:1904562 phosphatidylinositol 5-phosphate metabolic process(GO:1904562)
0.1 1.7 GO:0097264 self proteolysis(GO:0097264)
0.1 0.2 GO:0045763 negative regulation of cellular amino acid metabolic process(GO:0045763)
0.1 0.3 GO:0044828 negative regulation by host of viral genome replication(GO:0044828)
0.1 0.3 GO:0060011 Sertoli cell proliferation(GO:0060011)
0.1 0.2 GO:0007493 endodermal cell fate determination(GO:0007493)
0.0 0.2 GO:1905123 regulation of endosome organization(GO:1904978) regulation of glucosylceramidase activity(GO:1905123)
0.0 0.2 GO:0031291 Ran protein signal transduction(GO:0031291)
0.0 0.1 GO:0032877 positive regulation of DNA endoreduplication(GO:0032877) negative regulation of transcription involved in G1/S transition of mitotic cell cycle(GO:0071930)
0.0 0.3 GO:0072385 minus-end-directed organelle transport along microtubule(GO:0072385)
0.0 0.4 GO:0038031 non-canonical Wnt signaling pathway via JNK cascade(GO:0038031)
0.0 0.2 GO:0010847 regulation of chromatin assembly(GO:0010847)
0.0 0.2 GO:0008343 adult feeding behavior(GO:0008343)
0.0 0.4 GO:1904628 response to phorbol 13-acetate 12-myristate(GO:1904627) cellular response to phorbol 13-acetate 12-myristate(GO:1904628)
0.0 1.1 GO:0001573 ganglioside metabolic process(GO:0001573)
0.0 0.6 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.0 0.5 GO:0051044 positive regulation of membrane protein ectodomain proteolysis(GO:0051044)
0.0 0.2 GO:0072658 maintenance of protein location in membrane(GO:0072658) maintenance of protein location in plasma membrane(GO:0072660) positive regulation of membrane depolarization during cardiac muscle cell action potential(GO:1900827)
0.0 0.3 GO:0042415 norepinephrine metabolic process(GO:0042415)
0.0 0.3 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.0 0.4 GO:0030050 vesicle transport along actin filament(GO:0030050)
0.0 0.1 GO:0070966 nuclear-transcribed mRNA catabolic process, no-go decay(GO:0070966)
0.0 0.1 GO:0072369 regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter(GO:0072369)
0.0 0.1 GO:0043634 polyadenylation-dependent ncRNA catabolic process(GO:0043634)
0.0 0.6 GO:0006783 heme biosynthetic process(GO:0006783)
0.0 0.2 GO:0045292 mRNA cis splicing, via spliceosome(GO:0045292)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0034686 integrin alphav-beta8 complex(GO:0034686)
0.1 0.3 GO:0002945 cyclin K-CDK12 complex(GO:0002944) cyclin K-CDK13 complex(GO:0002945)
0.1 0.6 GO:1990589 ATF4-CREB1 transcription factor complex(GO:1990589)
0.0 0.9 GO:0071011 precatalytic spliceosome(GO:0071011)
0.0 0.5 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.1 GO:0090498 extrinsic component of Golgi membrane(GO:0090498)
0.0 0.3 GO:0005642 annulate lamellae(GO:0005642)
0.0 0.5 GO:0030877 beta-catenin destruction complex(GO:0030877)
0.0 0.3 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.0 0.6 GO:0044295 axonal growth cone(GO:0044295)
0.0 0.5 GO:0010369 chromocenter(GO:0010369)
0.0 0.0 GO:0098855 HCN channel complex(GO:0098855)
0.0 0.1 GO:0000439 core TFIIH complex(GO:0000439)
0.0 0.1 GO:0031466 Cul5-RING ubiquitin ligase complex(GO:0031466)
0.0 0.5 GO:0035098 ESC/E(Z) complex(GO:0035098)
0.0 0.4 GO:0016581 NuRD complex(GO:0016581) CHD-type complex(GO:0090545)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:1990430 extracellular matrix protein binding(GO:1990430)
0.1 0.4 GO:0098770 FBXO family protein binding(GO:0098770)
0.1 0.3 GO:0047389 glycerophosphocholine phosphodiesterase activity(GO:0047389)
0.1 0.6 GO:1990763 arrestin family protein binding(GO:1990763)
0.1 0.5 GO:0030160 GKAP/Homer scaffold activity(GO:0030160)
0.0 1.2 GO:0045499 chemorepellent activity(GO:0045499)
0.0 0.8 GO:0034452 dynactin binding(GO:0034452)
0.0 0.3 GO:0001665 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity(GO:0001665)
0.0 0.6 GO:0070016 armadillo repeat domain binding(GO:0070016)
0.0 0.3 GO:0035612 AP-2 adaptor complex binding(GO:0035612)
0.0 0.4 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.2 GO:0001042 RNA polymerase I core binding(GO:0001042)
0.0 0.2 GO:0052629 phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.6 GO:0030676 Rac guanyl-nucleotide exchange factor activity(GO:0030676)
0.0 0.2 GO:0001206 transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001206)
0.0 0.3 GO:0051400 BH domain binding(GO:0051400)
0.0 0.6 GO:0032452 histone demethylase activity(GO:0032452)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.1 PID INTEGRIN5 PATHWAY Beta5 beta6 beta7 and beta8 integrin cell surface interactions
0.0 0.6 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.0 0.6 ST G ALPHA S PATHWAY G alpha s Pathway
0.0 1.5 PID NETRIN PATHWAY Netrin-mediated signaling events

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.5 REACTOME ROLE OF DCC IN REGULATING APOPTOSIS Genes involved in Role of DCC in regulating apoptosis
0.0 0.7 REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF CAMKII Genes involved in CREB phosphorylation through the activation of CaMKII
0.0 0.6 REACTOME TRANSPORT OF RIBONUCLEOPROTEINS INTO THE HOST NUCLEUS Genes involved in Transport of Ribonucleoproteins into the Host Nucleus