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SARS-CoV-2 Analysis Results (GEO series: GSE147507)
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Results for CUUUGGU
Z-value: 1.09
Motif logo
miRNA associated with seed CUUUGGU
| Name | miRBASE accession |
|---|---|
|
hsa-miR-9-5p
|
MIMAT0000441 |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr9_-_117880477 Show fit | 4.83 |
ENST00000534839.1
ENST00000340094.3 ENST00000535648.1 ENST00000346706.3 ENST00000345230.3 ENST00000350763.4 |
tenascin C |
|
| chr2_-_1748214 Show fit | 4.77 |
ENST00000433670.1
ENST00000425171.1 ENST00000252804.4 |
peroxidasin homolog (Drosophila) |
|
| chr2_-_166651191 Show fit | 3.92 |
ENST00000392701.3
|
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3) |
|
| chr2_+_75061108 Show fit | 3.21 |
ENST00000290573.2
|
hexokinase 2 |
|
| chr1_-_27816556 Show fit | 3.15 |
ENST00000536657.1
|
WAS protein family, member 2 |
|
| chr10_+_99344104 Show fit | 3.11 |
ENST00000555577.1
ENST00000370649.3 |
phosphatidylinositol 4-kinase type 2 alpha Phosphatidylinositol 4-kinase type 2-alpha; Uncharacterized protein |
|
| chr3_-_185542817 Show fit | 2.74 |
ENST00000382199.2
|
insulin-like growth factor 2 mRNA binding protein 2 |
|
| chr5_-_49737184 Show fit | 2.46 |
ENST00000508934.1
ENST00000303221.5 |
embigin |
|
| chr9_+_115913222 Show fit | 2.45 |
ENST00000259392.3
|
solute carrier family 31 (copper transporter), member 2 |
|
| chr16_+_68771128 Show fit | 2.42 |
ENST00000261769.5
ENST00000422392.2 |
cadherin 1, type 1, E-cadherin (epithelial) |
Network of associatons between targets according to the STRING database.
First level regulatory network of CUUUGGU
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 4.8 | GO:0042744 | hydrogen peroxide catabolic process(GO:0042744) |
| 0.2 | 4.7 | GO:0034389 | lipid particle organization(GO:0034389) |
| 1.5 | 4.5 | GO:0002276 | basophil activation involved in immune response(GO:0002276) |
| 0.1 | 4.2 | GO:0035855 | megakaryocyte development(GO:0035855) |
| 0.5 | 3.9 | GO:0018242 | protein O-linked glycosylation via serine(GO:0018242) |
| 0.9 | 3.5 | GO:0060447 | bud outgrowth involved in lung branching(GO:0060447) |
| 0.1 | 3.4 | GO:0030208 | dermatan sulfate biosynthetic process(GO:0030208) |
| 0.5 | 3.2 | GO:0035795 | negative regulation of mitochondrial membrane permeability(GO:0035795) |
| 0.4 | 3.1 | GO:0030579 | ubiquitin-dependent SMAD protein catabolic process(GO:0030579) |
| 0.2 | 2.6 | GO:0035878 | nail development(GO:0035878) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 10.4 | GO:0055038 | recycling endosome membrane(GO:0055038) |
| 0.0 | 5.2 | GO:0055037 | recycling endosome(GO:0055037) |
| 0.2 | 4.8 | GO:0005614 | interstitial matrix(GO:0005614) |
| 0.9 | 4.5 | GO:0035838 | growing cell tip(GO:0035838) |
| 0.0 | 4.4 | GO:0030496 | midbody(GO:0030496) |
| 0.2 | 4.2 | GO:0031209 | SCAR complex(GO:0031209) |
| 0.2 | 3.1 | GO:0016600 | flotillin complex(GO:0016600) |
| 0.0 | 2.8 | GO:0030864 | cortical actin cytoskeleton(GO:0030864) |
| 0.1 | 2.6 | GO:0090544 | BAF-type complex(GO:0090544) |
| 0.1 | 2.5 | GO:0005942 | phosphatidylinositol 3-kinase complex(GO:0005942) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 6.0 | GO:0017124 | SH3 domain binding(GO:0017124) |
| 1.0 | 4.8 | GO:0005152 | interleukin-1 receptor antagonist activity(GO:0005152) |
| 0.5 | 4.8 | GO:0045545 | syndecan binding(GO:0045545) |
| 0.0 | 4.7 | GO:0017048 | Rho GTPase binding(GO:0017048) |
| 1.1 | 4.5 | GO:0035651 | AP-3 adaptor complex binding(GO:0035651) |
| 0.4 | 3.2 | GO:0008865 | glucokinase activity(GO:0004340) hexokinase activity(GO:0004396) fructokinase activity(GO:0008865) mannokinase activity(GO:0019158) |
| 0.2 | 3.1 | GO:0016176 | superoxide-generating NADPH oxidase activator activity(GO:0016176) |
| 0.1 | 3.1 | GO:0005086 | ARF guanyl-nucleotide exchange factor activity(GO:0005086) |
| 0.1 | 2.7 | GO:0043015 | gamma-tubulin binding(GO:0043015) |
| 0.2 | 2.6 | GO:0038132 | neuregulin binding(GO:0038132) |
Gene overrepresentation in C2:CP category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 5.9 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
| 0.1 | 5.6 | PID TGFBR PATHWAY | TGF-beta receptor signaling |
| 0.0 | 5.6 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
| 0.1 | 5.5 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
| 0.0 | 5.0 | PID NOTCH PATHWAY | Notch signaling pathway |
| 0.1 | 4.5 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
| 0.1 | 3.4 | PID ALK1 PATHWAY | ALK1 signaling events |
| 0.0 | 3.3 | PID RHOA PATHWAY | RhoA signaling pathway |
| 0.0 | 3.0 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
| 0.1 | 2.7 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
Gene overrepresentation in C2:CP:REACTOME category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 5.1 | REACTOME SYNTHESIS OF PIPS AT THE EARLY ENDOSOME MEMBRANE | Genes involved in Synthesis of PIPs at the early endosome membrane |
| 0.1 | 4.4 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |
| 0.1 | 4.1 | REACTOME SIGNALING BY ROBO RECEPTOR | Genes involved in Signaling by Robo receptor |
| 0.1 | 4.0 | REACTOME IL RECEPTOR SHC SIGNALING | Genes involved in Interleukin receptor SHC signaling |
| 0.2 | 3.9 | REACTOME NOTCH HLH TRANSCRIPTION PATHWAY | Genes involved in Notch-HLH transcription pathway |
| 0.1 | 3.8 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
| 0.0 | 3.6 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
| 0.0 | 2.7 | REACTOME TRANS GOLGI NETWORK VESICLE BUDDING | Genes involved in trans-Golgi Network Vesicle Budding |
| 0.1 | 2.4 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
| 0.0 | 2.4 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |