SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
DPRX | hg19_v2_chr19_+_54135310_54135310 | -0.10 | 6.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_321340 Show fit | 44.46 |
ENST00000526811.1
|
interferon induced transmembrane protein 3 |
|
chr11_-_321050 Show fit | 24.63 |
ENST00000399808.4
|
interferon induced transmembrane protein 3 |
|
chr3_+_136676851 Show fit | 8.66 |
ENST00000309741.5
|
interleukin 20 receptor beta |
|
chr3_+_136676707 Show fit | 8.55 |
ENST00000329582.4
|
interleukin 20 receptor beta |
|
chr10_-_105845674 Show fit | 7.86 |
ENST00000353479.5
ENST00000369733.3 |
collagen, type XVII, alpha 1 |
|
chr10_-_105845536 Show fit | 6.71 |
ENST00000393211.3
|
collagen, type XVII, alpha 1 |
|
chr5_-_150948414 Show fit | 6.63 |
ENST00000261800.5
|
FAT atypical cadherin 2 |
|
chr1_+_35220613 Show fit | 5.31 |
ENST00000338513.1
|
gap junction protein, beta 5, 31.1kDa |
|
chr18_-_28681950 Show fit | 5.29 |
ENST00000251081.6
|
desmocollin 2 |
|
chr9_-_22009297 Show fit | 4.73 |
ENST00000276925.6
|
cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.2 | 69.1 | GO:0046597 | negative regulation of viral entry into host cell(GO:0046597) |
4.3 | 17.2 | GO:0001808 | negative regulation of type IV hypersensitivity(GO:0001808) |
0.4 | 14.6 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
0.8 | 9.4 | GO:0086073 | bundle of His cell-Purkinje myocyte adhesion involved in cell communication(GO:0086073) |
0.2 | 7.9 | GO:0030511 | positive regulation of transforming growth factor beta receptor signaling pathway(GO:0030511) positive regulation of cellular response to transforming growth factor beta stimulus(GO:1903846) |
0.0 | 7.1 | GO:0010631 | epithelial cell migration(GO:0010631) |
1.7 | 6.8 | GO:0050717 | positive regulation of interleukin-1 alpha secretion(GO:0050717) |
0.6 | 5.6 | GO:0000023 | maltose metabolic process(GO:0000023) |
1.1 | 5.3 | GO:0060708 | spongiotrophoblast differentiation(GO:0060708) |
0.9 | 5.2 | GO:0061343 | cell adhesion involved in heart morphogenesis(GO:0061343) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 64.1 | GO:0031902 | late endosome membrane(GO:0031902) |
0.5 | 14.6 | GO:0030056 | hemidesmosome(GO:0030056) |
1.6 | 11.1 | GO:0097179 | protease inhibitor complex(GO:0097179) |
0.2 | 9.4 | GO:0030057 | desmosome(GO:0030057) |
0.0 | 7.4 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
0.1 | 5.6 | GO:0005604 | basement membrane(GO:0005604) |
0.2 | 5.3 | GO:0005922 | connexon complex(GO:0005922) |
0.0 | 4.7 | GO:0043198 | dendritic shaft(GO:0043198) |
0.0 | 4.7 | GO:1904813 | ficolin-1-rich granule(GO:0101002) ficolin-1-rich granule lumen(GO:1904813) |
0.0 | 4.5 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.9 | 17.2 | GO:0042015 | interleukin-20 binding(GO:0042015) |
0.8 | 9.4 | GO:0086083 | cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication(GO:0086083) |
0.3 | 7.9 | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) |
0.1 | 7.4 | GO:0001106 | RNA polymerase II transcription corepressor activity(GO:0001106) |
0.5 | 7.0 | GO:0089720 | caspase binding(GO:0089720) |
0.2 | 6.0 | GO:0045499 | chemorepellent activity(GO:0045499) |
0.0 | 6.0 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.6 | 5.6 | GO:0004558 | alpha-1,4-glucosidase activity(GO:0004558) maltose alpha-glucosidase activity(GO:0032450) |
0.1 | 4.9 | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity(GO:0004198) |
0.0 | 4.7 | GO:0000979 | RNA polymerase II core promoter sequence-specific DNA binding(GO:0000979) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 13.4 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 8.5 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.1 | 7.2 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
0.2 | 6.8 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.0 | 4.1 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.1 | 3.4 | ST GRANULE CELL SURVIVAL PATHWAY | Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway. |
0.0 | 3.1 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 3.0 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 2.0 | PID CONE PATHWAY | Visual signal transduction: Cones |
0.0 | 2.0 | PID RHOA PATHWAY | RhoA signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 62.0 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.2 | 13.4 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.1 | 7.9 | REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION | Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |
0.3 | 6.9 | REACTOME THE NLRP3 INFLAMMASOME | Genes involved in The NLRP3 inflammasome |
0.2 | 5.3 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.1 | 4.3 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 4.3 | REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS | Genes involved in Apoptotic cleavage of cellular proteins |
0.1 | 3.6 | REACTOME ACTIVATION OF THE AP1 FAMILY OF TRANSCRIPTION FACTORS | Genes involved in Activation of the AP-1 family of transcription factors |
0.1 | 3.0 | REACTOME NA CL DEPENDENT NEUROTRANSMITTER TRANSPORTERS | Genes involved in Na+/Cl- dependent neurotransmitter transporters |
0.0 | 2.8 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |