SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
GLI2 | hg19_v2_chr2_+_121493717_121493823 | 0.74 | 1.9e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr16_+_57844549 Show fit | 4.67 |
ENST00000564282.1
|
uncharacterized protein LOC388282 |
|
chr19_+_45417921 Show fit | 4.51 |
ENST00000252491.4
ENST00000592885.1 ENST00000589781.1 |
apolipoprotein C-I |
|
chrX_-_30326445 Show fit | 4.26 |
ENST00000378963.1
|
nuclear receptor subfamily 0, group B, member 1 |
|
chr19_+_45417812 Show fit | 4.18 |
ENST00000592535.1
|
apolipoprotein C-I |
|
chr19_+_45417504 Show fit | 4.10 |
ENST00000588750.1
ENST00000588802.1 |
apolipoprotein C-I |
|
chr1_-_21948906 Show fit | 3.68 |
ENST00000374761.2
ENST00000599760.1 |
RAP1 GTPase activating protein |
|
chr19_+_2249308 Show fit | 3.67 |
ENST00000592877.1
ENST00000221496.4 |
anti-Mullerian hormone |
|
chrY_+_2709527 Show fit | 3.58 |
ENST00000250784.8
|
ribosomal protein S4, Y-linked 1 |
|
chr19_+_45418067 Show fit | 3.37 |
ENST00000589078.1
ENST00000586638.1 |
apolipoprotein C-I |
|
chr4_-_6383594 Show fit | 3.18 |
ENST00000335585.5
|
protein phosphatase 2, regulatory subunit B, gamma |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.0 | 16.2 | GO:0010900 | negative regulation of phosphatidylcholine catabolic process(GO:0010900) |
2.1 | 6.4 | GO:1903697 | negative regulation of microvillus assembly(GO:1903697) |
0.4 | 5.9 | GO:0007144 | female meiosis I(GO:0007144) |
0.0 | 5.5 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane(GO:0006614) |
1.6 | 4.7 | GO:0017186 | peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase(GO:0017186) |
1.1 | 4.5 | GO:0060032 | notochord regression(GO:0060032) |
0.9 | 4.5 | GO:0042376 | phylloquinone metabolic process(GO:0042374) phylloquinone catabolic process(GO:0042376) quinone catabolic process(GO:1901662) |
0.1 | 4.4 | GO:0071447 | cellular response to hydroperoxide(GO:0071447) |
0.3 | 4.3 | GO:0043985 | histone H4-R3 methylation(GO:0043985) |
0.6 | 4.1 | GO:0071486 | cellular response to high light intensity(GO:0071486) retinal rod cell apoptotic process(GO:0097473) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 16.3 | GO:0042627 | chylomicron(GO:0042627) |
0.0 | 9.9 | GO:0000922 | spindle pole(GO:0000922) |
0.1 | 5.9 | GO:0005844 | polysome(GO:0005844) |
0.1 | 5.8 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
0.1 | 5.5 | GO:0097546 | ciliary base(GO:0097546) |
0.0 | 4.4 | GO:0035580 | specific granule lumen(GO:0035580) |
0.3 | 4.1 | GO:0042788 | polysomal ribosome(GO:0042788) |
0.1 | 4.1 | GO:0031095 | platelet dense tubular network membrane(GO:0031095) |
0.1 | 4.1 | GO:0030673 | axolemma(GO:0030673) |
0.1 | 3.7 | GO:1902711 | GABA-A receptor complex(GO:1902711) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 16.2 | GO:0060228 | phosphatidylcholine-sterol O-acyltransferase activator activity(GO:0060228) |
0.1 | 6.1 | GO:0019843 | rRNA binding(GO:0019843) |
0.0 | 5.9 | GO:0004725 | protein tyrosine phosphatase activity(GO:0004725) |
0.1 | 5.5 | GO:0017075 | syntaxin-1 binding(GO:0017075) |
0.0 | 5.2 | GO:0001227 | transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227) |
0.3 | 4.9 | GO:0001135 | transcription factor activity, RNA polymerase II transcription factor recruiting(GO:0001135) |
1.6 | 4.7 | GO:0016603 | glutaminyl-peptide cyclotransferase activity(GO:0016603) |
0.1 | 4.3 | GO:0000217 | DNA secondary structure binding(GO:0000217) |
0.1 | 4.2 | GO:0008569 | ATP-dependent microtubule motor activity, minus-end-directed(GO:0008569) |
0.7 | 4.1 | GO:0047179 | platelet-activating factor acetyltransferase activity(GO:0047179) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 5.9 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
0.1 | 5.4 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.0 | 5.2 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.2 | 4.6 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
0.1 | 4.6 | PID IFNG PATHWAY | IFN-gamma pathway |
0.1 | 4.1 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.1 | 3.8 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.2 | 3.7 | PID ALK2 PATHWAY | ALK2 signaling events |
0.1 | 3.2 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 3.2 | PID HEDGEHOG GLI PATHWAY | Hedgehog signaling events mediated by Gli proteins |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.4 | REACTOME SCFSKP2 MEDIATED DEGRADATION OF P27 P21 | Genes involved in SCF(Skp2)-mediated degradation of p27/p21 |
0.1 | 6.6 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
0.1 | 6.2 | REACTOME RAP1 SIGNALLING | Genes involved in Rap1 signalling |
0.2 | 5.9 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |
0.1 | 4.6 | REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS | Genes involved in Association of TriC/CCT with target proteins during biosynthesis |
0.0 | 4.5 | REACTOME G ALPHA S SIGNALLING EVENTS | Genes involved in G alpha (s) signalling events |
0.1 | 4.3 | REACTOME BASE EXCISION REPAIR | Genes involved in Base Excision Repair |
0.1 | 3.9 | REACTOME SYNTHESIS OF GLYCOSYLPHOSPHATIDYLINOSITOL GPI | Genes involved in Synthesis of glycosylphosphatidylinositol (GPI) |
0.0 | 3.8 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.2 | 3.7 | REACTOME NEGATIVE REGULATION OF THE PI3K AKT NETWORK | Genes involved in Negative regulation of the PI3K/AKT network |