SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HOXB6 | hg19_v2_chr17_-_46682321_46682362 | -0.85 | 2.5e-06 | Click! |
PRRX2 | hg19_v2_chr9_+_132427883_132427951 | -0.85 | 2.7e-06 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr17_-_39093672 Show fit | 7.57 |
ENST00000209718.3
ENST00000436344.3 ENST00000485751.1 |
keratin 23 (histone deacetylase inducible) |
|
chr3_+_41236325 Show fit | 4.95 |
ENST00000426215.1
ENST00000405570.1 |
catenin (cadherin-associated protein), beta 1, 88kDa |
|
chr11_+_35222629 Show fit | 4.58 |
ENST00000526553.1
|
CD44 molecule (Indian blood group) |
|
chr2_-_161056762 Show fit | 4.17 |
ENST00000428609.2
ENST00000409967.2 |
integrin, beta 6 |
|
chr15_+_93443419 Show fit | 3.84 |
ENST00000557381.1
ENST00000420239.2 |
chromodomain helicase DNA binding protein 2 |
|
chr9_+_2159850 Show fit | 3.60 |
ENST00000416751.1
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 |
|
chr12_-_28124903 Show fit | 3.59 |
ENST00000395872.1
ENST00000354417.3 ENST00000201015.4 |
parathyroid hormone-like hormone |
|
chr14_-_69261310 Show fit | 3.46 |
ENST00000336440.3
|
ZFP36 ring finger protein-like 1 |
|
chr3_-_196911002 Show fit | 3.27 |
ENST00000452595.1
|
discs, large homolog 1 (Drosophila) |
|
chr7_-_83824449 Show fit | 3.20 |
ENST00000420047.1
|
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 11.0 | GO:0001578 | microtubule bundle formation(GO:0001578) |
1.0 | 10.2 | GO:1903764 | regulation of potassium ion export across plasma membrane(GO:1903764) |
0.7 | 7.8 | GO:0038044 | transforming growth factor-beta secretion(GO:0038044) |
0.3 | 7.8 | GO:0060044 | negative regulation of cardiac muscle cell proliferation(GO:0060044) |
1.8 | 7.4 | GO:1903045 | neural crest cell migration involved in sympathetic nervous system development(GO:1903045) |
0.2 | 7.4 | GO:1900087 | positive regulation of G1/S transition of mitotic cell cycle(GO:1900087) |
0.0 | 7.1 | GO:0007286 | spermatid development(GO:0007286) |
0.0 | 6.7 | GO:0070268 | cornification(GO:0070268) |
0.1 | 6.4 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
0.9 | 6.3 | GO:2000670 | positive regulation of dendritic cell apoptotic process(GO:2000670) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 20.2 | GO:0000790 | nuclear chromatin(GO:0000790) |
1.3 | 10.7 | GO:0097442 | CA3 pyramidal cell dendrite(GO:0097442) |
0.6 | 10.2 | GO:0097025 | lateral loop(GO:0043219) MPP7-DLG1-LIN7 complex(GO:0097025) |
0.1 | 10.1 | GO:0005882 | intermediate filament(GO:0005882) |
0.1 | 10.1 | GO:0016605 | PML body(GO:0016605) |
0.0 | 8.3 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.3 | 7.6 | GO:0071564 | npBAF complex(GO:0071564) |
0.0 | 7.3 | GO:0005923 | bicellular tight junction(GO:0005923) |
2.3 | 7.0 | GO:0034685 | integrin alphav-beta6 complex(GO:0034685) |
0.0 | 6.5 | GO:0030425 | dendrite(GO:0030425) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 11.8 | GO:0002162 | dystroglycan binding(GO:0002162) |
0.3 | 10.9 | GO:0051428 | peptide hormone receptor binding(GO:0051428) |
0.1 | 10.8 | GO:0008094 | DNA-dependent ATPase activity(GO:0008094) |
0.8 | 10.2 | GO:0097016 | L27 domain binding(GO:0097016) |
0.0 | 10.0 | GO:0003682 | chromatin binding(GO:0003682) |
1.0 | 8.4 | GO:0042289 | MHC class II protein binding(GO:0042289) |
0.1 | 7.6 | GO:0001618 | virus receptor activity(GO:0001618) |
0.3 | 7.3 | GO:0030215 | semaphorin receptor binding(GO:0030215) |
0.4 | 7.2 | GO:0001011 | transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087) |
0.1 | 6.9 | GO:0050681 | androgen receptor binding(GO:0050681) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 15.1 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.2 | 11.3 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.1 | 11.2 | PID LKB1 PATHWAY | LKB1 signaling events |
0.1 | 9.4 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 9.2 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 9.0 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.2 | 7.8 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.1 | 7.7 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.1 | 7.5 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.1 | 7.4 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.0 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.3 | 9.0 | REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS | Genes involved in Ionotropic activity of Kainate Receptors |
0.1 | 9.0 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.3 | 7.3 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
0.0 | 7.1 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |
0.2 | 6.1 | REACTOME SEMA3A PLEXIN REPULSION SIGNALING BY INHIBITING INTEGRIN ADHESION | Genes involved in SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion |
0.2 | 5.0 | REACTOME HYALURONAN UPTAKE AND DEGRADATION | Genes involved in Hyaluronan uptake and degradation |
0.2 | 4.0 | REACTOME ERKS ARE INACTIVATED | Genes involved in ERKs are inactivated |
0.1 | 4.0 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |
0.1 | 3.6 | REACTOME SIGNALING BY CONSTITUTIVELY ACTIVE EGFR | Genes involved in Signaling by constitutively active EGFR |