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SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for HOXD9

Z-value: 0.54

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Transcription factors associated with HOXD9

Gene Symbol Gene ID Gene Info
HOXD9
ENSG00000128709.10 homeobox D9

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HOXD9hg19_v2_chr2_+_176987088_176987088-0.321.6e-01Click!

Activity profile of HOXD9 motif

Sorted Z-values of HOXD9 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr18_+_61554932 3.82 ENST00000299502.4
ENST00000457692.1
ENST00000413956.1
SERPINB2
serpin peptidase inhibitor, clade B (ovalbumin), member 2
chr10_-_105845674 3.33 ENST00000353479.5
ENST00000369733.3
COL17A1
collagen, type XVII, alpha 1
chr1_-_59043166 3.00 ENST00000371225.2
TACSTD2
tumor-associated calcium signal transducer 2
chr10_-_105845536 2.55 ENST00000393211.3
COL17A1
collagen, type XVII, alpha 1
chr4_-_68749699 2.14 ENST00000545541.1
TMPRSS11D
transmembrane protease, serine 11D
chr11_-_104972158 1.97 ENST00000598974.1
ENST00000593315.1
ENST00000594519.1
ENST00000415981.2
ENST00000525374.1
ENST00000375707.1
CASP1
CARD16
CARD17
caspase 1, apoptosis-related cysteine peptidase
caspase recruitment domain family, member 16
caspase recruitment domain family, member 17
chr6_-_32634425 1.90 ENST00000399082.3
ENST00000399079.3
ENST00000374943.4
ENST00000434651.2
HLA-DQB1
major histocompatibility complex, class II, DQ beta 1
chr18_+_21452804 1.78 ENST00000269217.6
LAMA3
laminin, alpha 3
chr12_-_15104040 1.73 ENST00000541644.1
ENST00000545895.1
ARHGDIB
Rho GDP dissociation inhibitor (GDI) beta
chr4_-_68749745 1.72 ENST00000283916.6
TMPRSS11D
transmembrane protease, serine 11D
chr11_+_123986069 1.70 ENST00000456829.2
ENST00000361352.5
ENST00000449321.1
ENST00000392748.1
ENST00000360334.4
ENST00000392744.4
VWA5A
von Willebrand factor A domain containing 5A
chr4_+_71384300 1.64 ENST00000504451.1
AMTN
amelotin
chr4_+_69313145 1.52 ENST00000305363.4
TMPRSS11E
transmembrane protease, serine 11E
chr11_-_104905840 1.37 ENST00000526568.1
ENST00000393136.4
ENST00000531166.1
ENST00000534497.1
ENST00000527979.1
ENST00000446369.1
ENST00000353247.5
ENST00000528974.1
ENST00000533400.1
ENST00000525825.1
ENST00000436863.3
CASP1
caspase 1, apoptosis-related cysteine peptidase
chr2_+_210444748 1.33 ENST00000392194.1
MAP2
microtubule-associated protein 2
chr19_-_53466095 1.30 ENST00000391786.2
ENST00000434371.2
ENST00000357666.4
ENST00000438970.2
ENST00000270457.4
ENST00000535506.1
ENST00000444460.2
ENST00000457013.2
ZNF816
zinc finger protein 816
chr1_+_152956549 1.24 ENST00000307122.2
SPRR1A
small proline-rich protein 1A
chr3_-_139258521 1.23 ENST00000483943.2
ENST00000232219.2
ENST00000492918.1
RBP1
retinol binding protein 1, cellular
chr17_+_61151306 1.21 ENST00000580068.1
ENST00000580466.1
TANC2
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
chr6_-_138833630 1.17 ENST00000533765.1
NHSL1
NHS-like 1
chr6_+_18387570 1.15 ENST00000259939.3
RNF144B
ring finger protein 144B
chr3_+_182511266 1.12 ENST00000323116.5
ENST00000493826.1
ATP11B
ATPase, class VI, type 11B
chr1_+_87012922 1.11 ENST00000263723.5
CLCA4
chloride channel accessory 4
chr4_+_71384257 1.08 ENST00000339336.4
AMTN
amelotin
chr1_+_16083154 1.07 ENST00000375771.1
FBLIM1
filamin binding LIM protein 1
chr3_-_196987309 1.07 ENST00000453607.1
DLG1
discs, large homolog 1 (Drosophila)
chr15_+_49715449 1.05 ENST00000560979.1
FGF7
fibroblast growth factor 7
chr5_-_39274617 0.99 ENST00000510188.1
FYB
FYN binding protein
chr1_+_87012753 0.92 ENST00000370563.3
CLCA4
chloride channel accessory 4
chr11_-_104827425 0.85 ENST00000393150.3
CASP4
caspase 4, apoptosis-related cysteine peptidase
chr12_-_122879969 0.83 ENST00000540304.1
CLIP1
CAP-GLY domain containing linker protein 1
chr4_+_169633310 0.83 ENST00000510998.1
PALLD
palladin, cytoskeletal associated protein
chr14_-_24733444 0.81 ENST00000560478.1
ENST00000560443.1
TGM1
transglutaminase 1
chr11_+_93754513 0.80 ENST00000315765.9
HEPHL1
hephaestin-like 1
chr12_-_88974236 0.78 ENST00000228280.5
ENST00000552044.1
ENST00000357116.4
KITLG
KIT ligand
chr12_-_95009837 0.75 ENST00000551457.1
TMCC3
transmembrane and coiled-coil domain family 3
chr6_+_130339710 0.73 ENST00000526087.1
ENST00000533560.1
ENST00000361794.2
L3MBTL3
l(3)mbt-like 3 (Drosophila)
chr12_-_10007448 0.71 ENST00000538152.1
CLEC2B
C-type lectin domain family 2, member B
chr4_+_186990298 0.71 ENST00000296795.3
ENST00000513189.1
TLR3
toll-like receptor 3
chr6_+_149539767 0.69 ENST00000606202.1
ENST00000536230.1
ENST00000445901.1
TAB2
RP1-111D6.3
TGF-beta activated kinase 1/MAP3K7 binding protein 2
RP1-111D6.3
chr12_+_119772502 0.68 ENST00000536742.1
ENST00000327554.2
CCDC60
coiled-coil domain containing 60
chr2_+_210518057 0.68 ENST00000452717.1
MAP2
microtubule-associated protein 2
chr1_-_9953295 0.67 ENST00000377258.1
CTNNBIP1
catenin, beta interacting protein 1
chr5_-_78808617 0.65 ENST00000282260.6
ENST00000508576.1
ENST00000535690.1
HOMER1
homer homolog 1 (Drosophila)
chr1_+_81771806 0.64 ENST00000370721.1
ENST00000370727.1
ENST00000370725.1
ENST00000370723.1
ENST00000370728.1
ENST00000370730.1
LPHN2
latrophilin 2
chr9_+_70856397 0.63 ENST00000360171.6
CBWD3
COBW domain containing 3
chr11_-_46639436 0.62 ENST00000532281.1
HARBI1
harbinger transposase derived 1
chr3_-_195310802 0.61 ENST00000421243.1
ENST00000453131.1
APOD
apolipoprotein D
chr4_+_37455536 0.61 ENST00000381980.4
ENST00000508175.1
C4orf19
chromosome 4 open reading frame 19
chr2_+_210517895 0.61 ENST00000447185.1
MAP2
microtubule-associated protein 2
chr19_+_45843994 0.60 ENST00000391946.2
KLC3
kinesin light chain 3
chr6_+_15401075 0.59 ENST00000541660.1
JARID2
jumonji, AT rich interactive domain 2
chr1_+_78383813 0.59 ENST00000342754.5
NEXN
nexilin (F actin binding protein)
chr17_+_61086917 0.59 ENST00000424789.2
ENST00000389520.4
TANC2
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
chr20_-_20693131 0.58 ENST00000202677.7
RALGAPA2
Ral GTPase activating protein, alpha subunit 2 (catalytic)
chr4_-_83765613 0.58 ENST00000503937.1
SEC31A
SEC31 homolog A (S. cerevisiae)
chr16_+_4545853 0.57 ENST00000575129.1
ENST00000398595.3
ENST00000414777.1
HMOX2
heme oxygenase (decycling) 2
chr7_+_6713376 0.56 ENST00000399484.3
ENST00000544825.1
ENST00000401847.1
AC073343.1
Uncharacterized protein
chr7_-_130353553 0.56 ENST00000330992.7
ENST00000445977.2
COPG2
coatomer protein complex, subunit gamma 2
chr22_-_19466643 0.55 ENST00000474226.1
UFD1L
ubiquitin fusion degradation 1 like (yeast)
chr1_+_38022513 0.54 ENST00000296218.7
DNALI1
dynein, axonemal, light intermediate chain 1
chr1_+_16083098 0.54 ENST00000496928.2
ENST00000508310.1
FBLIM1
filamin binding LIM protein 1
chr3_+_107364769 0.53 ENST00000449271.1
ENST00000425868.1
ENST00000449213.1
BBX
bobby sox homolog (Drosophila)
chr11_+_69924639 0.53 ENST00000538023.1
ENST00000398543.2
ANO1
anoctamin 1, calcium activated chloride channel
chr17_+_44679808 0.53 ENST00000571172.1
NSF
N-ethylmaleimide-sensitive factor
chr2_+_135809835 0.53 ENST00000264158.8
ENST00000539493.1
ENST00000442034.1
ENST00000425393.1
RAB3GAP1
RAB3 GTPase activating protein subunit 1 (catalytic)
chr17_+_66521936 0.52 ENST00000592800.1
PRKAR1A
protein kinase, cAMP-dependent, regulatory, type I, alpha
chr7_-_92777606 0.51 ENST00000437805.1
ENST00000446959.1
ENST00000439952.1
ENST00000414791.1
ENST00000446033.1
ENST00000411955.1
ENST00000318238.4
SAMD9L
sterile alpha motif domain containing 9-like
chr1_+_160370344 0.51 ENST00000368061.2
VANGL2
VANGL planar cell polarity protein 2
chr6_+_45390222 0.51 ENST00000359524.5
RUNX2
runt-related transcription factor 2
chr11_-_16430399 0.51 ENST00000528252.1
SOX6
SRY (sex determining region Y)-box 6
chr8_+_79503458 0.50 ENST00000518467.1
PKIA
protein kinase (cAMP-dependent, catalytic) inhibitor alpha
chr3_-_99569821 0.50 ENST00000487087.1
FILIP1L
filamin A interacting protein 1-like
chr20_+_19870167 0.50 ENST00000440354.2
RIN2
Ras and Rab interactor 2
chr8_-_42396185 0.49 ENST00000518717.1
SLC20A2
solute carrier family 20 (phosphate transporter), member 2
chr20_-_39928756 0.48 ENST00000432768.2
ZHX3
zinc fingers and homeoboxes 3
chr14_+_62164340 0.48 ENST00000557538.1
ENST00000539097.1
HIF1A
hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
chr3_-_182703688 0.48 ENST00000466812.1
ENST00000487822.1
ENST00000460412.1
ENST00000469954.1
DCUN1D1
DCN1, defective in cullin neddylation 1, domain containing 1
chr18_-_5396271 0.48 ENST00000579951.1
EPB41L3
erythrocyte membrane protein band 4.1-like 3
chr4_+_75174180 0.46 ENST00000413830.1
EPGN
epithelial mitogen
chr4_-_146859787 0.46 ENST00000508784.1
ZNF827
zinc finger protein 827
chr8_+_104892639 0.45 ENST00000436393.2
RIMS2
regulating synaptic membrane exocytosis 2
chr1_+_82165350 0.44 ENST00000359929.3
LPHN2
latrophilin 2
chr2_-_128284020 0.44 ENST00000295321.4
ENST00000455721.2
IWS1
IWS1 homolog (S. cerevisiae)
chr4_-_120225600 0.43 ENST00000399075.4
C4orf3
chromosome 4 open reading frame 3
chr13_+_76413852 0.43 ENST00000533809.2
LMO7
LIM domain 7
chr2_+_234668894 0.43 ENST00000305208.5
ENST00000608383.1
ENST00000360418.3
UGT1A8
UGT1A1
UDP glucuronosyltransferase 1 family, polypeptide A1
UDP glucuronosyltransferase 1 family, polypeptide A8
chrX_-_68385274 0.43 ENST00000374584.3
ENST00000590146.1
PJA1
praja ring finger 1, E3 ubiquitin protein ligase
chr12_-_118628350 0.42 ENST00000537952.1
ENST00000537822.1
TAOK3
TAO kinase 3
chr10_-_28623368 0.42 ENST00000441595.2
MPP7
membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
chr2_+_234627424 0.42 ENST00000373409.3
UGT1A4
UDP glucuronosyltransferase 1 family, polypeptide A4
chrX_-_68385354 0.42 ENST00000361478.1
PJA1
praja ring finger 1, E3 ubiquitin protein ligase
chr7_+_123469037 0.41 ENST00000489978.1
HYAL4
hyaluronoglucosaminidase 4
chr7_-_107204706 0.41 ENST00000393603.2
COG5
component of oligomeric golgi complex 5
chr12_+_19358228 0.41 ENST00000424268.1
ENST00000543806.1
PLEKHA5
pleckstrin homology domain containing, family A member 5
chr3_+_107318157 0.41 ENST00000406780.1
BBX
bobby sox homolog (Drosophila)
chr11_-_128457446 0.41 ENST00000392668.4
ETS1
v-ets avian erythroblastosis virus E26 oncogene homolog 1
chr1_-_95391315 0.40 ENST00000545882.1
ENST00000415017.1
CNN3
calponin 3, acidic
chr3_+_102153859 0.38 ENST00000306176.1
ENST00000466937.1
ZPLD1
zona pellucida-like domain containing 1
chr7_+_18536090 0.37 ENST00000441986.1
HDAC9
histone deacetylase 9
chr11_-_105010320 0.35 ENST00000532895.1
ENST00000530950.1
CARD18
caspase recruitment domain family, member 18
chr10_+_86184676 0.35 ENST00000543283.1
CCSER2
coiled-coil serine-rich protein 2
chr12_-_91546926 0.35 ENST00000550758.1
DCN
decorin
chr15_-_49913126 0.35 ENST00000561064.1
ENST00000299338.6
FAM227B
family with sequence similarity 227, member B
chr2_+_191334212 0.35 ENST00000444317.1
ENST00000535751.1
MFSD6
major facilitator superfamily domain containing 6
chr4_+_74606223 0.33 ENST00000307407.3
ENST00000401931.1
IL8
interleukin 8
chr3_+_107364683 0.33 ENST00000413213.1
BBX
bobby sox homolog (Drosophila)
chr4_-_76944621 0.33 ENST00000306602.1
CXCL10
chemokine (C-X-C motif) ligand 10
chr4_-_69434245 0.33 ENST00000317746.2
UGT2B17
UDP glucuronosyltransferase 2 family, polypeptide B17
chr1_-_21377383 0.32 ENST00000374935.3
EIF4G3
eukaryotic translation initiation factor 4 gamma, 3
chr11_+_69924679 0.31 ENST00000531604.1
ANO1
anoctamin 1, calcium activated chloride channel
chr9_+_20927764 0.31 ENST00000603044.1
ENST00000604254.1
FOCAD
focadhesin
chr16_-_66764119 0.30 ENST00000569320.1
DYNC1LI2
dynein, cytoplasmic 1, light intermediate chain 2
chr7_+_90012986 0.29 ENST00000416322.1
CLDN12
claudin 12
chr18_-_46895066 0.29 ENST00000583225.1
ENST00000584983.1
ENST00000583280.1
ENST00000581738.1
DYM
dymeclin
chr8_-_71157595 0.28 ENST00000519724.1
NCOA2
nuclear receptor coactivator 2
chr18_-_57027194 0.28 ENST00000251047.5
LMAN1
lectin, mannose-binding, 1
chr1_+_16083123 0.28 ENST00000510393.1
ENST00000430076.1
FBLIM1
filamin binding LIM protein 1
chr11_+_12115543 0.28 ENST00000537344.1
ENST00000532179.1
ENST00000526065.1
MICAL2
microtubule associated monooxygenase, calponin and LIM domain containing 2
chr1_-_197036364 0.28 ENST00000367412.1
F13B
coagulation factor XIII, B polypeptide
chrX_-_77150911 0.27 ENST00000373336.3
MAGT1
magnesium transporter 1
chr10_+_115511213 0.25 ENST00000361048.1
PLEKHS1
pleckstrin homology domain containing, family S member 1
chr5_-_147211226 0.25 ENST00000296695.5
SPINK1
serine peptidase inhibitor, Kazal type 1
chr22_-_19466683 0.25 ENST00000399523.1
ENST00000421968.2
ENST00000447868.1
UFD1L
ubiquitin fusion degradation 1 like (yeast)
chr3_+_195413160 0.25 ENST00000599448.1
LINC00969
long intergenic non-protein coding RNA 969
chr3_-_107777208 0.25 ENST00000398258.3
CD47
CD47 molecule
chr6_-_31632962 0.24 ENST00000456540.1
ENST00000445768.1
GPANK1
G patch domain and ankyrin repeats 1
chr13_-_33924755 0.24 ENST00000439831.1
ENST00000567873.1
STARD13
StAR-related lipid transfer (START) domain containing 13
chr19_+_10397648 0.24 ENST00000340992.4
ENST00000393717.2
ICAM4
intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)
chr5_+_158654712 0.24 ENST00000520323.1
CTB-11I22.2
CTB-11I22.2
chr13_+_33160553 0.23 ENST00000315596.10
PDS5B
PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
chr15_+_52155001 0.23 ENST00000544199.1
TMOD3
tropomodulin 3 (ubiquitous)
chr9_+_96846740 0.23 ENST00000288976.3
PTPDC1
protein tyrosine phosphatase domain containing 1
chr14_+_57671888 0.21 ENST00000391612.1
AL391152.1
AL391152.1
chr17_+_75181292 0.21 ENST00000431431.2
SEC14L1
SEC14-like 1 (S. cerevisiae)
chr10_-_71169031 0.20 ENST00000373307.1
TACR2
tachykinin receptor 2
chr2_+_181988560 0.19 ENST00000424170.1
ENST00000435411.1
AC104820.2
AC104820.2
chr2_+_181988620 0.18 ENST00000428474.1
ENST00000424655.1
AC104820.2
AC104820.2
chr5_+_112043186 0.18 ENST00000509732.1
ENST00000457016.1
ENST00000507379.1
APC
adenomatous polyposis coli
chr22_-_41682172 0.17 ENST00000356244.3
RANGAP1
Ran GTPase activating protein 1
chr15_-_39486510 0.17 ENST00000560743.1
RP11-265N7.1
RP11-265N7.1
chr13_-_81801115 0.17 ENST00000567258.1
LINC00564
long intergenic non-protein coding RNA 564
chr7_-_92146729 0.16 ENST00000541751.1
PEX1
peroxisomal biogenesis factor 1
chr2_-_70417827 0.16 ENST00000457952.1
C2orf42
chromosome 2 open reading frame 42
chr4_-_185395191 0.16 ENST00000510814.1
ENST00000507523.1
ENST00000506230.1
IRF2
interferon regulatory factor 2
chr11_-_78052923 0.16 ENST00000340149.2
GAB2
GRB2-associated binding protein 2
chr11_+_63606373 0.16 ENST00000402010.2
ENST00000315032.8
ENST00000377809.4
ENST00000413835.2
ENST00000377810.3
MARK2
MAP/microtubule affinity-regulating kinase 2
chr7_+_5920429 0.15 ENST00000242104.5
OCM
oncomodulin
chr22_-_19466732 0.15 ENST00000263202.10
ENST00000360834.4
UFD1L
ubiquitin fusion degradation 1 like (yeast)
chr2_+_185463093 0.15 ENST00000302277.6
ZNF804A
zinc finger protein 804A
chr17_+_57233087 0.15 ENST00000578777.1
ENST00000577457.1
ENST00000582995.1
PRR11
proline rich 11
chr6_+_31021225 0.14 ENST00000565192.1
ENST00000562344.1
HCG22
HLA complex group 22
chr14_-_38028689 0.13 ENST00000553425.1
RP11-356O9.2
RP11-356O9.2
chr1_-_152196669 0.13 ENST00000368801.2
HRNR
hornerin
chr2_+_109223595 0.13 ENST00000410093.1
LIMS1
LIM and senescent cell antigen-like domains 1
chr2_-_207078154 0.13 ENST00000447845.1
GPR1
G protein-coupled receptor 1
chr4_-_72649763 0.12 ENST00000513476.1
GC
group-specific component (vitamin D binding protein)
chr4_-_110723194 0.12 ENST00000394635.3
CFI
complement factor I
chr12_-_95510743 0.12 ENST00000551521.1
FGD6
FYVE, RhoGEF and PH domain containing 6
chr6_+_46761118 0.12 ENST00000230588.4
MEP1A
meprin A, alpha (PABA peptide hydrolase)
chr5_-_119669160 0.12 ENST00000514240.1
CTC-552D5.1
CTC-552D5.1
chr2_-_188312971 0.12 ENST00000410068.1
ENST00000447403.1
ENST00000410102.1
CALCRL
calcitonin receptor-like
chr12_+_19358192 0.11 ENST00000538305.1
PLEKHA5
pleckstrin homology domain containing, family A member 5
chr9_+_124103625 0.11 ENST00000594963.1
AL161784.1
Uncharacterized protein
chr5_-_111093167 0.10 ENST00000446294.2
ENST00000419114.2
NREP
neuronal regeneration related protein
chr18_-_53069419 0.10 ENST00000570177.2
TCF4
transcription factor 4
chr4_-_84035868 0.10 ENST00000426923.2
ENST00000509973.1
PLAC8
placenta-specific 8
chr19_-_19739321 0.10 ENST00000588461.1
LPAR2
lysophosphatidic acid receptor 2
chr14_+_23709555 0.10 ENST00000430154.2
C14orf164
chromosome 14 open reading frame 164
chr2_-_166702601 0.10 ENST00000428888.1
AC009495.4
AC009495.4
chr6_-_39399087 0.10 ENST00000229913.5
ENST00000541946.1
ENST00000394362.1
KIF6
kinesin family member 6
chr5_+_140588269 0.10 ENST00000541609.1
ENST00000239450.2
PCDHB12
protocadherin beta 12
chr13_+_111748183 0.10 ENST00000422994.1
LINC00368
long intergenic non-protein coding RNA 368
chr14_+_62462541 0.10 ENST00000430451.2
SYT16
synaptotagmin XVI
chrX_-_33229636 0.09 ENST00000357033.4
DMD
dystrophin
chr21_-_31588365 0.09 ENST00000399899.1
CLDN8
claudin 8
chr1_+_146373546 0.09 ENST00000446760.2
NBPF12
neuroblastoma breakpoint family, member 12
chr6_+_53948328 0.09 ENST00000370876.2
MLIP
muscular LMNA-interacting protein
chr14_+_23654525 0.08 ENST00000399910.1
ENST00000492621.1
C14orf164
chromosome 14 open reading frame 164
chr4_-_36245561 0.08 ENST00000506189.1
ARAP2
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
chr1_-_236046872 0.08 ENST00000536965.1
LYST
lysosomal trafficking regulator
chr6_+_131958436 0.08 ENST00000357639.3
ENST00000543135.1
ENST00000427148.2
ENST00000358229.5
ENPP3
ectonucleotide pyrophosphatase/phosphodiesterase 3
chr12_-_11002063 0.08 ENST00000544994.1
ENST00000228811.4
ENST00000540107.1
PRR4
proline rich 4 (lacrimal)
chr2_+_28824786 0.08 ENST00000541605.1
PLB1
phospholipase B1
chr12_-_118797475 0.07 ENST00000541786.1
ENST00000419821.2
ENST00000541878.1
TAOK3
TAO kinase 3
chr4_-_70361579 0.07 ENST00000512583.1
UGT2B4
UDP glucuronosyltransferase 2 family, polypeptide B4
chr14_-_36645674 0.07 ENST00000556013.2
PTCSC3
papillary thyroid carcinoma susceptibility candidate 3 (non-protein coding)
chr13_-_47012325 0.07 ENST00000409879.2
KIAA0226L
KIAA0226-like
chr3_+_62936098 0.07 ENST00000475886.1
ENST00000465684.1
ENST00000465262.1
ENST00000468072.1
LINC00698
long intergenic non-protein coding RNA 698
chr6_-_74231444 0.07 ENST00000331523.2
ENST00000356303.2
EEF1A1
eukaryotic translation elongation factor 1 alpha 1
chr13_+_46039037 0.06 ENST00000349995.5
COG3
component of oligomeric golgi complex 3
chr7_-_5998714 0.06 ENST00000539903.1
RSPH10B
radial spoke head 10 homolog B (Chlamydomonas)
chr18_+_616672 0.06 ENST00000338387.7
CLUL1
clusterin-like 1 (retinal)
chr4_-_70361615 0.06 ENST00000305107.6
UGT2B4
UDP glucuronosyltransferase 2 family, polypeptide B4
chr18_-_24443151 0.06 ENST00000440832.3
AQP4
aquaporin 4
chr6_-_133055815 0.05 ENST00000509351.1
ENST00000417437.2
ENST00000414302.2
ENST00000423615.2
ENST00000427187.2
ENST00000275223.3
ENST00000519686.2
VNN3
vanin 3
chr16_+_21689835 0.05 ENST00000286149.4
ENST00000388958.3
OTOA
otoancorin
chr7_+_120629653 0.05 ENST00000450913.2
ENST00000340646.5
CPED1
cadherin-like and PC-esterase domain containing 1
chr14_-_68000442 0.05 ENST00000554278.1
TMEM229B
transmembrane protein 229B
chr3_-_27498235 0.05 ENST00000295736.5
ENST00000428386.1
ENST00000428179.1
SLC4A7
solute carrier family 4, sodium bicarbonate cotransporter, member 7

Network of associatons between targets according to the STRING database.

First level regulatory network of HOXD9

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 2.7 GO:0070175 positive regulation of enamel mineralization(GO:0070175)
0.8 3.3 GO:0050717 positive regulation of interleukin-1 alpha secretion(GO:0050717)
0.3 3.0 GO:0090191 negative regulation of branching involved in ureteric bud morphogenesis(GO:0090191)
0.3 0.8 GO:0033023 mast cell homeostasis(GO:0033023) mast cell apoptotic process(GO:0033024) regulation of mast cell apoptotic process(GO:0033025) regulation of mast cell proliferation(GO:0070666) positive regulation of mast cell proliferation(GO:0070668)
0.2 1.7 GO:0071461 cellular response to redox state(GO:0071461)
0.2 1.1 GO:0015917 aminophospholipid transport(GO:0015917)
0.2 7.7 GO:0031581 hemidesmosome assembly(GO:0031581)
0.2 0.7 GO:0034343 type III interferon production(GO:0034343) regulation of type III interferon production(GO:0034344) positive regulation of interferon-alpha biosynthetic process(GO:0045356)
0.2 0.5 GO:1903371 establishment of protein localization to endoplasmic reticulum membrane(GO:0097051) regulation of endoplasmic reticulum tubular network organization(GO:1903371)
0.2 1.0 GO:0060437 lung growth(GO:0060437)
0.2 0.5 GO:0060489 orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060488) planar dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060489) lateral sprouting involved in lung morphogenesis(GO:0060490)
0.2 0.6 GO:0007206 phospholipase C-activating G-protein coupled glutamate receptor signaling pathway(GO:0007206)
0.2 0.6 GO:2000097 regulation of smooth muscle cell-matrix adhesion(GO:2000097)
0.1 0.4 GO:0097198 histone H3-K36 trimethylation(GO:0097198)
0.1 0.6 GO:0006788 heme oxidation(GO:0006788)
0.1 0.8 GO:0006789 bilirubin conjugation(GO:0006789)
0.1 0.9 GO:0043163 cell envelope organization(GO:0043163) external encapsulating structure organization(GO:0045229)
0.1 0.7 GO:0002528 regulation of vascular permeability involved in acute inflammatory response(GO:0002528)
0.1 0.8 GO:0044861 protein transport into plasma membrane raft(GO:0044861)
0.1 1.1 GO:1903764 regulation of potassium ion export across plasma membrane(GO:1903764)
0.1 0.5 GO:0051541 neural fold elevation formation(GO:0021502) elastin metabolic process(GO:0051541) epithelial cell differentiation involved in mammary gland alveolus development(GO:0061030) positive regulation of chemokine-mediated signaling pathway(GO:0070101)
0.1 0.3 GO:1904017 cellular response to Thyroglobulin triiodothyronine(GO:1904017)
0.1 0.9 GO:1903265 positive regulation of tumor necrosis factor-mediated signaling pathway(GO:1903265)
0.1 1.9 GO:0033623 regulation of integrin activation(GO:0033623)
0.1 3.8 GO:0042730 fibrinolysis(GO:0042730)
0.1 0.5 GO:0021778 oligodendrocyte cell fate specification(GO:0021778) oligodendrocyte cell fate commitment(GO:0021779) glial cell fate specification(GO:0021780)
0.1 1.2 GO:0006776 vitamin A metabolic process(GO:0006776)
0.1 1.2 GO:0097475 motor neuron migration(GO:0097475)
0.1 0.3 GO:0019417 sulfur oxidation(GO:0019417)
0.1 0.8 GO:0015705 iodide transport(GO:0015705)
0.1 0.5 GO:0035494 SNARE complex disassembly(GO:0035494)
0.1 0.5 GO:0002175 protein localization to paranode region of axon(GO:0002175)
0.1 0.4 GO:0030578 PML body organization(GO:0030578)
0.1 0.3 GO:0010751 negative regulation of nitric oxide mediated signal transduction(GO:0010751)
0.0 0.2 GO:0033685 negative regulation of luteinizing hormone secretion(GO:0033685)
0.0 1.0 GO:2000480 negative regulation of cAMP-dependent protein kinase activity(GO:2000480)
0.0 0.7 GO:0043249 erythrocyte maturation(GO:0043249)
0.0 0.1 GO:0006711 estrogen catabolic process(GO:0006711)
0.0 0.2 GO:1904117 response to vasopressin(GO:1904116) cellular response to vasopressin(GO:1904117)
0.0 0.4 GO:0071896 protein localization to adherens junction(GO:0071896)
0.0 0.2 GO:0097498 endothelial tube lumen extension(GO:0097498)
0.0 0.2 GO:0060151 peroxisome localization(GO:0060151) microtubule-based peroxisome localization(GO:0060152)
0.0 0.6 GO:0048739 cardiac muscle fiber development(GO:0048739)
0.0 3.6 GO:0007585 respiratory gaseous exchange(GO:0007585)
0.0 0.6 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.0 0.5 GO:0098814 spontaneous neurotransmitter secretion(GO:0061669) spontaneous synaptic transmission(GO:0098814)
0.0 0.5 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.0 0.5 GO:0042487 regulation of odontogenesis of dentin-containing tooth(GO:0042487)
0.0 0.4 GO:0061458 reproductive system development(GO:0061458)
0.0 0.3 GO:0010819 regulation of T cell chemotaxis(GO:0010819)
0.0 0.4 GO:0050713 negative regulation of interleukin-1 beta secretion(GO:0050713)
0.0 0.5 GO:0045741 positive regulation of epidermal growth factor-activated receptor activity(GO:0045741)
0.0 0.5 GO:0044341 sodium-dependent phosphate transport(GO:0044341)
0.0 0.3 GO:1900747 negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747)
0.0 0.6 GO:0090110 cargo loading into COPII-coated vesicle(GO:0090110)
0.0 0.1 GO:0033364 mast cell secretory granule organization(GO:0033364)
0.0 0.1 GO:0030505 inorganic diphosphate transport(GO:0030505)
0.0 0.8 GO:0006825 copper ion transport(GO:0006825)
0.0 0.6 GO:0003334 keratinocyte development(GO:0003334)
0.0 1.2 GO:0018149 peptide cross-linking(GO:0018149)
0.0 0.5 GO:0045116 protein neddylation(GO:0045116)
0.0 0.2 GO:0051694 pointed-end actin filament capping(GO:0051694)
0.0 0.4 GO:0090050 positive regulation of cell migration involved in sprouting angiogenesis(GO:0090050)
0.0 2.7 GO:0001578 microtubule bundle formation(GO:0001578)
0.0 0.2 GO:1904885 beta-catenin destruction complex assembly(GO:1904885)
0.0 1.0 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.1 GO:0034285 response to sucrose(GO:0009744) response to disaccharide(GO:0034285)
0.0 0.1 GO:1904588 cellular response to glycoprotein(GO:1904588) cellular response to thyrotropin-releasing hormone(GO:1905229)
0.0 0.3 GO:0052695 cellular glucuronidation(GO:0052695)
0.0 0.4 GO:0030207 chondroitin sulfate catabolic process(GO:0030207)
0.0 0.3 GO:0034498 early endosome to Golgi transport(GO:0034498)
0.0 0.2 GO:0015693 magnesium ion transport(GO:0015693)
0.0 1.0 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.0 0.2 GO:0039536 negative regulation of RIG-I signaling pathway(GO:0039536)
0.0 1.2 GO:0002381 immunoglobulin production involved in immunoglobulin mediated immune response(GO:0002381)
0.0 0.4 GO:0007095 mitotic G2 DNA damage checkpoint(GO:0007095)
0.0 1.9 GO:1902476 chloride transmembrane transport(GO:1902476)
0.0 0.4 GO:0016338 calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules(GO:0016338)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 3.3 GO:0072558 NLRP1 inflammasome complex(GO:0072558) protease inhibitor complex(GO:0097179)
0.3 2.6 GO:0097442 CA3 pyramidal cell dendrite(GO:0097442)
0.2 5.9 GO:0030056 hemidesmosome(GO:0030056)
0.2 0.9 GO:0097169 AIM2 inflammasome complex(GO:0097169)
0.2 1.8 GO:0005610 laminin-5 complex(GO:0005610)
0.1 0.5 GO:0060187 cell pole(GO:0060187)
0.1 3.8 GO:0005605 basal lamina(GO:0005605)
0.1 1.9 GO:0042613 MHC class II protein complex(GO:0042613)
0.1 0.8 GO:0044352 pinosome(GO:0044352) macropinosome(GO:0044354)
0.1 3.0 GO:0009925 basal plasma membrane(GO:0009925)
0.1 0.2 GO:1990723 cytoplasmic periphery of the nuclear pore complex(GO:1990723)
0.1 0.4 GO:0097025 MPP7-DLG1-LIN7 complex(GO:0097025)
0.0 0.3 GO:0033655 host cell cytoplasm(GO:0030430) host cell cytoplasm part(GO:0033655)
0.0 0.1 GO:0036457 keratohyalin granule(GO:0036457)
0.0 0.6 GO:0035253 ciliary rootlet(GO:0035253)
0.0 0.8 GO:0030877 beta-catenin destruction complex(GO:0030877)
0.0 0.6 GO:0030126 COPI vesicle coat(GO:0030126)
0.0 2.0 GO:0001533 cornified envelope(GO:0001533)
0.0 0.7 GO:0036020 endolysosome membrane(GO:0036020)
0.0 0.6 GO:0030127 COPII vesicle coat(GO:0030127)
0.0 0.5 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.5 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.4 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.0 0.7 GO:0043034 costamere(GO:0043034)
0.0 0.2 GO:0098647 collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647)
0.0 0.6 GO:0035098 ESC/E(Z) complex(GO:0035098)
0.0 0.5 GO:0071782 endoplasmic reticulum tubular network(GO:0071782)
0.0 1.9 GO:0097517 stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517)
0.0 0.3 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 1.3 GO:0035577 azurophil granule membrane(GO:0035577)
0.0 0.8 GO:0030286 dynein complex(GO:0030286)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 GO:0005173 stem cell factor receptor binding(GO:0005173)
0.2 4.6 GO:0050700 CARD domain binding(GO:0050700)
0.1 1.7 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.1 0.6 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 1.9 GO:0032395 MHC class II receptor activity(GO:0032395)
0.1 0.8 GO:0015111 iodide transmembrane transporter activity(GO:0015111)
0.1 1.2 GO:0030280 structural constituent of epidermis(GO:0030280)
0.1 1.1 GO:0097016 L27 domain binding(GO:0097016)
0.1 0.3 GO:0048248 CXCR3 chemokine receptor binding(GO:0048248)
0.1 2.4 GO:0002162 dystroglycan binding(GO:0002162)
0.1 1.9 GO:0031005 filamin binding(GO:0031005)
0.1 0.8 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.1 2.0 GO:0005229 intracellular calcium activated chloride channel activity(GO:0005229)
0.1 0.8 GO:0003810 protein-glutamine gamma-glutamyltransferase activity(GO:0003810)
0.1 0.3 GO:0010861 thyroid hormone receptor activator activity(GO:0010861) thyroid hormone receptor coactivator activity(GO:0030375)
0.1 0.5 GO:0015319 sodium:inorganic phosphate symporter activity(GO:0015319)
0.0 0.2 GO:0004995 tachykinin receptor activity(GO:0004995)
0.0 1.2 GO:0016918 retinal binding(GO:0016918) retinol binding(GO:0019841)
0.0 0.1 GO:1902271 D3 vitamins binding(GO:1902271)
0.0 1.1 GO:0004012 phospholipid-translocating ATPase activity(GO:0004012)
0.0 0.8 GO:0045504 dynein heavy chain binding(GO:0045504)
0.0 1.0 GO:0034236 protein kinase A catalytic subunit binding(GO:0034236)
0.0 1.0 GO:0005104 fibroblast growth factor receptor binding(GO:0005104)
0.0 0.2 GO:0039552 RIG-I binding(GO:0039552)
0.0 0.4 GO:0004415 hyalurononglucosaminidase activity(GO:0004415)
0.0 1.2 GO:0001972 retinoic acid binding(GO:0001972)
0.0 0.1 GO:0004948 calcitonin receptor activity(GO:0004948)
0.0 1.6 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 0.6 GO:0035256 G-protein coupled glutamate receptor binding(GO:0035256)
0.0 1.0 GO:0051010 microtubule plus-end binding(GO:0051010)
0.0 0.5 GO:0010314 phosphatidylinositol-5-phosphate binding(GO:0010314)
0.0 0.7 GO:0070016 armadillo repeat domain binding(GO:0070016)
0.0 0.6 GO:0051371 muscle alpha-actinin binding(GO:0051371)
0.0 2.8 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 0.9 GO:0035035 histone acetyltransferase binding(GO:0035035)
0.0 0.2 GO:0070053 thrombospondin receptor activity(GO:0070053)
0.0 0.1 GO:0035529 NADH pyrophosphatase activity(GO:0035529)
0.0 0.1 GO:0050253 retinyl-palmitate esterase activity(GO:0050253)
0.0 0.3 GO:0005537 mannose binding(GO:0005537)
0.0 0.6 GO:0098641 cadherin binding involved in cell-cell adhesion(GO:0098641)
0.0 0.2 GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity(GO:0004579)
0.0 0.5 GO:0070530 K63-linked polyubiquitin binding(GO:0070530)
0.0 1.0 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.0 0.4 GO:0031078 histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041)
0.0 0.0 GO:0031626 beta-endorphin binding(GO:0031626)
0.0 0.4 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 3.2 PID ANTHRAX PATHWAY Cellular roles of Anthrax toxin
0.1 5.8 NABA COLLAGENS Genes encoding collagen proteins
0.1 1.8 PID INTEGRIN4 PATHWAY Alpha6 beta4 integrin-ligand interactions
0.0 1.5 PID RETINOIC ACID PATHWAY Retinoic acid receptors-mediated signaling
0.0 1.1 PID P38 MKK3 6PATHWAY p38 MAPK signaling pathway
0.0 2.8 PID LKB1 PATHWAY LKB1 signaling events
0.0 2.6 PID CASPASE PATHWAY Caspase cascade in apoptosis
0.0 0.8 PID LIS1 PATHWAY Lissencephaly gene (LIS1) in neuronal migration and development
0.0 0.7 PID TOLL ENDOGENOUS PATHWAY Endogenous TLR signaling
0.0 1.0 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.0 1.1 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.0 0.8 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 3.3 REACTOME THE NLRP3 INFLAMMASOME Genes involved in The NLRP3 inflammasome
0.1 5.8 REACTOME COLLAGEN FORMATION Genes involved in Collagen formation
0.1 1.4 REACTOME TRAF6 MEDIATED INDUCTION OF TAK1 COMPLEX Genes involved in TRAF6 mediated induction of TAK1 complex
0.0 1.0 REACTOME ACTIVATED POINT MUTANTS OF FGFR2 Genes involved in Activated point mutants of FGFR2
0.0 1.9 REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS Genes involved in Cell-extracellular matrix interactions
0.0 1.2 REACTOME GLUCURONIDATION Genes involved in Glucuronidation
0.0 1.1 REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS Genes involved in Ionotropic activity of Kainate Receptors
0.0 0.8 REACTOME REGULATION OF KIT SIGNALING Genes involved in Regulation of KIT signaling
0.0 1.2 REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS Genes involved in Signal regulatory protein (SIRP) family interactions
0.0 0.6 REACTOME METABOLISM OF PORPHYRINS Genes involved in Metabolism of porphyrins
0.0 0.2 REACTOME CTNNB1 PHOSPHORYLATION CASCADE Genes involved in Beta-catenin phosphorylation cascade
0.0 1.1 REACTOME ION TRANSPORT BY P TYPE ATPASES Genes involved in Ion transport by P-type ATPases
0.0 2.2 REACTOME CELL JUNCTION ORGANIZATION Genes involved in Cell junction organization
0.0 0.6 REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC
0.0 0.8 REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression
0.0 0.9 REACTOME NOD1 2 SIGNALING PATHWAY Genes involved in NOD1/2 Signaling Pathway
0.0 0.3 REACTOME COMMON PATHWAY Genes involved in Common Pathway
0.0 0.6 REACTOME KINESINS Genes involved in Kinesins
0.0 0.5 REACTOME TRAFFICKING OF GLUR2 CONTAINING AMPA RECEPTORS Genes involved in Trafficking of GluR2-containing AMPA receptors
0.0 0.5 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.0 0.3 REACTOME CS DS DEGRADATION Genes involved in CS/DS degradation
0.0 0.5 REACTOME PKA MEDIATED PHOSPHORYLATION OF CREB Genes involved in PKA-mediated phosphorylation of CREB