SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000136944.13 | LIM homeobox transcription factor 1 beta | |
ENSG00000130675.10 | motor neuron and pancreas homeobox 1 | |
ENSG00000173976.11 | retina and anterior neural fold homeobox 2 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
MNX1 | hg19_v2_chr7_-_156803329_156803362 | -0.94 | 1.1e-09 | Click! |
LMX1B | hg19_v2_chr9_+_129376722_129376748 | -0.94 | 1.4e-09 | Click! |
RAX2 | hg19_v2_chr19_-_3772209_3772236 | 0.12 | 6.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_28122980 Show fit | 11.60 |
ENST00000395868.3
ENST00000534890.1 |
parathyroid hormone-like hormone |
|
chr12_-_28123206 Show fit | 10.57 |
ENST00000542963.1
ENST00000535992.1 |
parathyroid hormone-like hormone |
|
chr11_+_35222629 Show fit | 8.92 |
ENST00000526553.1
|
CD44 molecule (Indian blood group) |
|
chr3_-_151034734 Show fit | 7.96 |
ENST00000260843.4
|
G protein-coupled receptor 87 |
|
chr5_+_31193847 Show fit | 6.67 |
ENST00000514738.1
ENST00000265071.2 |
cadherin 6, type 2, K-cadherin (fetal kidney) |
|
chr2_+_158114051 Show fit | 6.41 |
ENST00000259056.4
|
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5) |
|
chr4_+_169013666 Show fit | 4.95 |
ENST00000359299.3
|
annexin A10 |
|
chr5_+_66300464 Show fit | 4.84 |
ENST00000436277.1
|
microtubule associated serine/threonine kinase family member 4 |
|
chr5_+_166711804 Show fit | 4.81 |
ENST00000518659.1
ENST00000545108.1 |
teneurin transmembrane protein 2 |
|
chr14_+_72052983 Show fit | 4.63 |
ENST00000358550.2
|
signal-induced proliferation-associated 1 like 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 22.2 | GO:0032331 | negative regulation of chondrocyte differentiation(GO:0032331) |
0.1 | 12.5 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
0.2 | 12.0 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
0.0 | 10.4 | GO:0018105 | peptidyl-serine phosphorylation(GO:0018105) |
1.0 | 8.9 | GO:1900623 | regulation of monocyte aggregation(GO:1900623) positive regulation of monocyte aggregation(GO:1900625) |
0.3 | 8.0 | GO:0035589 | G-protein coupled purinergic nucleotide receptor signaling pathway(GO:0035589) |
0.0 | 7.1 | GO:0051056 | regulation of small GTPase mediated signal transduction(GO:0051056) |
0.1 | 6.6 | GO:0016266 | O-glycan processing(GO:0016266) |
0.3 | 4.3 | GO:0043249 | erythrocyte maturation(GO:0043249) |
0.2 | 4.3 | GO:0097264 | self proteolysis(GO:0097264) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 31.9 | GO:0005794 | Golgi apparatus(GO:0005794) |
0.0 | 11.0 | GO:0043197 | dendritic spine(GO:0043197) |
1.1 | 8.9 | GO:0035692 | macrophage migration inhibitory factor receptor complex(GO:0035692) |
0.0 | 8.2 | GO:0043209 | myelin sheath(GO:0043209) |
0.1 | 6.7 | GO:0030964 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
1.0 | 3.8 | GO:0060187 | cell pole(GO:0060187) |
0.6 | 3.4 | GO:0045272 | plasma membrane respiratory chain complex I(GO:0045272) |
0.0 | 3.4 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
0.2 | 3.2 | GO:0030478 | actin cap(GO:0030478) |
0.0 | 3.0 | GO:0005730 | nucleolus(GO:0005730) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 22.2 | GO:0051428 | peptide hormone receptor binding(GO:0051428) |
0.0 | 20.7 | GO:0005509 | calcium ion binding(GO:0005509) |
0.2 | 12.4 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
0.0 | 9.8 | GO:0000287 | magnesium ion binding(GO:0000287) |
0.0 | 8.6 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.0 | 8.3 | GO:0051015 | actin filament binding(GO:0051015) |
0.3 | 8.0 | GO:0001608 | G-protein coupled nucleotide receptor activity(GO:0001608) G-protein coupled purinergic nucleotide receptor activity(GO:0045028) |
0.0 | 7.9 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.2 | 7.6 | GO:0005540 | hyaluronic acid binding(GO:0005540) |
0.2 | 6.4 | GO:0004653 | polypeptide N-acetylgalactosaminyltransferase activity(GO:0004653) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 22.8 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.3 | 10.1 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
0.0 | 6.5 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 4.6 | ST JNK MAPK PATHWAY | JNK MAPK Pathway |
0.0 | 4.0 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 4.0 | PID E2F PATHWAY | E2F transcription factor network |
0.0 | 3.1 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 2.3 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.0 | 2.3 | PID PS1 PATHWAY | Presenilin action in Notch and Wnt signaling |
0.0 | 2.2 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 19.4 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.2 | 9.8 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.4 | 8.9 | REACTOME HYALURONAN UPTAKE AND DEGRADATION | Genes involved in Hyaluronan uptake and degradation |
0.1 | 6.6 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
0.0 | 4.2 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.2 | 4.0 | REACTOME ERKS ARE INACTIVATED | Genes involved in ERKs are inactivated |
0.0 | 3.1 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 3.0 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 2.6 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
0.0 | 2.5 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |